Rh3DG169900

WD40 repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0002231
Physical Location & Seq
Forward (+)
14898544 .. 14907982
9439 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG169900.1

Sequence Viewer

Length: 2658 bp
ATGAATGAAGAGGAAGTGGAACCTCCACTTGGGGTTCTATTGGGTCGAAAGCGCGGGAAAACAAAGTCGGCCAAGAGAGCAAGCCAAGCAACACCGCACAGCACAGAGCCACTTCAAATCATCGAACCAGAGCCCGTCCCAATCGATGCGGAGCCAGTTGCAATTGAGCCAGAGAACTCAAGGAATGGCGCTAGGGGGGTTAGTGTTTCGATGTTCGATGACTCGGTGGAGAATCACTTCAGATTCATGCACACGATTTCCGAGCTCTGTGGCGACGCCGAAGGTGAGCCACTCCCGGAGAGCGACATTCAACGCTTATCGTCCTCCACCACTTTCCTGAGGGAATGGGCAGATTTTAAGTATGAACCTAGAGATGTTCGATTCGCTTGCGAAGCAGAAAGCTCTGATGGGGAGGATGTTGTCAGTAGCATAAACTTGCGGCAGTTTTCTTCTGCAACTGTTCCACAGAACGAGGCGGGGGACACATCTTCTCCAGAGTTGAGCCAAGACTATGTGATGTATGTTGGAGGGTCTGTTTGGGCATTGGATTGGTGTCCTAGAGTTCATGAAAGTCACGACCATCATGCAAAGTGCGAGTTTATTGCCATTGCTGCTCATCCCCCTGGATCTTCTTATCACAAGTTAGGTGAGCCACTTACTGGCAGAGGTGCCATTCAGATATGGTGTCTTCTAAATGCTAGTGTAAATGATGAAGGTGTTCCTATAGGAGACAAACCAAAAGGAGGAAATAAAAGGAGTGGAGCCACAGAAAAATGCACTGAACAAAAAAGGGGAAGACCCAGAAAGAAGCCATTAGAAGAATCTGTTGGCAAAGAGGCCACAGAAGAAAAACTGTCCGAGTCAAAAAGGCCTAGAGGAAGACCTAGAAAGAAGCCAATAGAAGAATCTATTGACAAAGAGGCCAAAGAAGAGAAATCAACTCAACCAAAGAGGCCTAGAGGAAGACCTAGAAATAAATCAATAGAAGAATCTGTTGACAACTTGGATGGGAGAACCAATTGTGATGAGGTTCTTGCTATTGATTATCCAAGGGAATCATCTGAGTTGCATTCTATGGATTGTCTTCCTGCAAATACTCAAGCAAATTTTGTACAAGAAGATCATGACAAAAAGCAACTAAGTTATGGGCAGAGTCAACCGAAGAAGCCTAGAGGAAGACCCAGAAAGAAGCCAATAAAAGAGCCTGTTGACAATTTAGATGGGGGCAGCAACAATAATTTTGAGGTTCTTGCAATTGAATACCAAAAGGAATCACTGAAGTTGCATTCTACGGATTGTCTTCTTGCAAATACTCAAGTGGACGCTGTACAAGAAGAAACAAGTTACAAGCAGACTCGATCAAAGAGGCCTAGAGGAATACATGGAAAGAAGCCAATAGAAGAATCTGTTGAAAACTTGGATGACAGCAGCAGTACGGGTGAGGCTCTTGATGATCAATATCCAAAGGAACTATTGGAGTTGGAGGGCATGGATTGCGCTCCTGAAAGTACTCAAGGAGATAAGGTACAAGATGATAGTGGTAAGAAAAGAAAAACGTATAAAAAGACTCGAGCAAAGATTCCTAGAGAAAAACCTGGAGAGAAGCCAGTAGAATATTCTGTTGATAACTTGCATGGGAGCAGCCATTATGCAGAGGCTCTTGGAGTCCAATATCTCAAGGAAACATCAGAGTTGCATGCTATGGATTGTGTTCCTGCATTTACTCAGGCGCATGATGTACAAGAAGCTCTTAATGAAAAACTTGAAAGTTCCGGACTGGGTCCTCAAACAAATAATAATGTTTCAAATAATGGTTATACTGAAATTGGCTCAATTAGGTGTTCAGTTCCAAAGGATGTAGCATTGCCAAGAATCATATTCTGCCTAGCTCACCATGGAAAGGTTGCTTGGGATGTGAAATGGCGTCCTCTTAATGAACATGATTCCAGATGCAAGCATCGAATGGGCTATCTTGCTGTTCTGTTGGGGAACGGGTCACTGGAAGTGTGGGAGGTTCCTGTTCCTCGTGCAATTGAAGTTATTTATTCTTCTTCATCTGGAGAGGGCACTGATCCTCGCTTTGTAAAATTGGCACCAGTATTTAGATGCTCAATGTTGAAGTCTGGTGACAAAAAAAGCATCCCTCTTACTGTGGAATGGTCAGCTTCACCACCTCACGATTACTTAATTGCCGGATGCCATGATGGAACTGTTGCTATGTGGAAGTTTTCTGCTAGTAATGTATCTCAAGATACAAGGCCTTTACTTTGTTTCAGCGCAGATACAAATCCTATTAGGGCGCTTTCTTGGGCCCCAGCTCAAAGCAATTCAGACAATGCAAATGTTATAGCTACCGCTGGACATGGAGGCCTAAAATTTTGGGACCTACGTGATCCATTCCGTCCCTTGTGGGACATCGATCATATACCAAGGTTCATATATAGTCTGGATTGGATTCCAGATCCAAGGTGTGTTCTTCTCTCCTTTGATGATGGAACAATGAGACTTCTCAGCTTGACAAAGGCTGCCTCTGATGCCCCTGTAACAGGAAAACCCTTTGCTGGAACAAAACAACAGGGCCTGCACAATCTTGGTTGTTTGCCTTTTGCTATCTGGAGTGTTCAAGTATCAAGACTAACAGGTCTTACTTCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AT_hook

Protein Analysis

885

Amino Acids

98.1

Weight (kDa)

5.88

Isoelectric Point (pI)

43.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_THOC3 PF25174 717 - 842 7.8e-06 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2640
AccB1I GGYRCC 2 cut(s) 668, 2092
AccB7I CCANNNNNTGG 1 cut(s) 659
AccII CGCG 1 cut(s) 54
AccIII TCCGGA 1 cut(s) 1772
AciI CCGC 6 cut(s) 54, 95, 149, 439, 476, 2355
AclWI GGATC 4 cut(s) 634, 2066, 2387, 2456
AcoI YGGCCR 1 cut(s) 69
AcsI RAATTY 2 cut(s) 1105, 2375
AcuI CTGAAG 2 cut(s) 223, 1298
AcyI GRCGYC 2 cut(s) 276, 1924
AfaI GTAC 6 cut(s) 1113, 1329, 1435, 1510, 1527, 1740
AfiI CCNNNNNNNGG 6 cut(s) 29, 659, 743, 1900, 2546, 2561
AgsI TTSAA 9 cut(s) 116, 311, 1259, 1412, 1766, 1806, 2036, 2119, 2624
AjnI CCWGG 2 cut(s) 622, 1594
AjuI GAANNNNNNNTTGG 6 cut(s) 12, 44, 810, 842, 1891, 1923
AluBI AGCT 8 cut(s) 265, 402, 1748, 1889, 2165, 2318, 2351, 2514
AluI AGCT 8 cut(s) 265, 402, 1748, 1889, 2165, 2318, 2351, 2514
Alw21I GWGCWC 1 cut(s) 267
Alw26I GTCTC 2 cut(s) 723, 2497
AlwI GGATC 4 cut(s) 634, 2066, 2387, 2456
AlwNI CAGNNNCTG 1 cut(s) 2581
Ama87I CYCGRG 1 cut(s) 1569
Aor13HI TCCGGA 1 cut(s) 1772
ApaI GGGCCC 1 cut(s) 2314
ApeKI GCWGC 5 cut(s) 611, 1227, 1428, 1641, 2525
ApoI RAATTY 2 cut(s) 1105, 2375
Asp700I GAANNNNTTC 2 cut(s) 236, 717
AspLEI GCGC 6 cut(s) 54, 191, 1499, 1732, 2279, 2302
AspS9I GGNCC 5 cut(s) 1781, 2310, 2311, 2383, 2578
AsuC2I CCSGG 1 cut(s) 296
AsuHPI GGTGA 6 cut(s) 296, 659, 1451, 1883, 2138, 2160
AvaI CYCGRG 1 cut(s) 1569
AvaII GGWCC 2 cut(s) 1781, 2383
AxyI CCTNAGG 1 cut(s) 338
BaeGI GKGCMC 2 cut(s) 2069, 2314
BanI GGYRCC 2 cut(s) 668, 2092
BanII GRGCYC 3 cut(s) 135, 267, 2314
BauI CACGAG 1 cut(s) 2025
BbsI GAAGAC 7 cut(s) 680, 802, 886, 970, 1076, 1183, 1292
Bbv12I GWGCWC 1 cut(s) 267
BbvI GCAGC 5 cut(s) 598, 1239, 1440, 1653, 2512
BccI CCATC 6 cut(s) 401, 588, 1001, 1214, 2198, 2486
BcgI CGANNNNNNTGC 6 cut(s) 369, 403, 566, 584, 600, 618
BciT130I CCWGG 2 cut(s) 624, 1596
BclI TGATCA 1 cut(s) 1453
BcnI CCSGG 1 cut(s) 296
BcoDI GTCTC 2 cut(s) 723, 2497
BfmI CTRYAG 1 cut(s) 723
BfoI RGCGCY 2 cut(s) 192, 2303
BisI GCNGC 6 cut(s) 440, 612, 1228, 1429, 1642, 2526
BlsI GCNGC 6 cut(s) 441, 613, 1229, 1430, 1643, 2527
BmcAI AGTACT 1 cut(s) 1510
Bme1390I CCNGG 3 cut(s) 296, 624, 1596
Bme18I GGWCC 2 cut(s) 1781, 2383
BmeT110I CYCGRG 1 cut(s) 1569
BmgT120I GGNCC 5 cut(s) 1781, 2310, 2311, 2383, 2578
BmrFI CCNGG 3 cut(s) 296, 624, 1596
BmrI ACTGGG 1 cut(s) 1787
BmsI GCATC 7 cut(s) 136, 1940, 1966, 2096, 2148, 2186, 2524
BmuI ACTGGG 1 cut(s) 1787
BpiI GAAGAC 7 cut(s) 680, 802, 886, 970, 1076, 1183, 1292
BpmI CTGGAG 4 cut(s) 477, 1617, 2079, 2635
BpuEI CTTGAG 6 cut(s) 163, 1083, 1299, 1497, 1661, 2232
BpuMI CCSGG 1 cut(s) 296
Bsa29I ATCGAT 2 cut(s) 144, 2418
BsaAI YACGTR 1 cut(s) 2390
BsaBI GATNNNNATC 2 cut(s) 1458, 2286
BsaHI GRCGYC 2 cut(s) 276, 1924
BsaJI CCNNGG 5 cut(s) 622, 1049, 1894, 2429, 2465
BsaWI WCCGGW 1 cut(s) 1772
BsaXI ACNNNNNCTCC 6 cut(s) 475, 505, 519, 549, 1509, 1539
Bsc4I CCNNNNNNNGG 6 cut(s) 29, 659, 743, 1900, 2546, 2561
Bse1I ACTGG 6 cut(s) 155, 664, 1607, 1782, 2004, 2096
Bse21I CCTNAGG 1 cut(s) 338
Bse3DI GCAATG 2 cut(s) 606, 1862
Bse8I GATNNNNATC 2 cut(s) 1458, 2286
BseAI TCCGGA 1 cut(s) 1772
BseBI CCWGG 2 cut(s) 624, 1596
BseCI ATCGAT 2 cut(s) 144, 2418
BseDI CCNNGG 5 cut(s) 622, 1049, 1894, 2429, 2465
BseGI GGATG 8 cut(s) 421, 616, 1012, 1426, 1861, 1918, 2139, 2201
BseJI GATNNNNATC 2 cut(s) 1458, 2286
BseLI CCNNNNNNNGG 6 cut(s) 29, 659, 743, 1900, 2546, 2561
BseMI GCAATG 2 cut(s) 606, 1862
BseMII CTCAG 4 cut(s) 329, 1053, 1739, 2524
BseNI ACTGG 6 cut(s) 155, 664, 1607, 1782, 2004, 2096
BseSI GKGCMC 2 cut(s) 2069, 2314
BseXI GCAGC 5 cut(s) 598, 1239, 1440, 1653, 2512
BseYI CCCAGC 1 cut(s) 2314
BsgI GTGCAG 1 cut(s) 2567
Bsh1236I CGCG 1 cut(s) 54
BshNI GGYRCC 2 cut(s) 668, 2092
BshVI ATCGAT 2 cut(s) 144, 2418
BsiHKAI GWGCWC 1 cut(s) 267
BsiHKCI CYCGRG 1 cut(s) 1569
BsiSI CCGG 3 cut(s) 296, 1773, 2193
BslFI GGGAC 5 cut(s) 122, 494, 2388, 2396, 2426
BslI CCNNNNNNNGG 6 cut(s) 29, 659, 743, 1900, 2546, 2561
BsmAI GTCTC 2 cut(s) 723, 2497
BsmFI GGGAC 5 cut(s) 122, 494, 2388, 2396, 2426
BsmI GAATGC 2 cut(s) 1069, 1285
BsoBI CYCGRG 1 cut(s) 1569
Bsp120I GGGCCC 1 cut(s) 2310
Bsp1286I GDGCHC 4 cut(s) 135, 267, 2069, 2314
Bsp13I TCCGGA 1 cut(s) 1772
Bsp1407I TGTACA 3 cut(s) 1111, 1327, 1738
Bsp143I GATC 8 cut(s) 626, 1120, 1358, 1453, 2071, 2392, 2419, 2461
Bsp19I CCATGG 1 cut(s) 1894
BspACI CCGC 6 cut(s) 54, 95, 149, 439, 476, 2355
BspCNI CTCAG 4 cut(s) 330, 1054, 1738, 2523
BspDI ATCGAT 2 cut(s) 144, 2418
BspEI TCCGGA 1 cut(s) 1772
BspFNI CGCG 1 cut(s) 54
BspHI TCATGA 2 cut(s) 565, 1123
BspPI GGATC 4 cut(s) 634, 2066, 2387, 2456
BspT107I GGYRCC 2 cut(s) 668, 2092
BsrDI GCAATG 2 cut(s) 606, 1862
BsrGI TGTACA 3 cut(s) 1111, 1327, 1738
BsrI ACTGG 6 cut(s) 155, 664, 1607, 1782, 2004, 2096
BssECI CCNNGG 5 cut(s) 622, 1049, 1894, 2429, 2465
BssMI GATC 8 cut(s) 626, 1120, 1358, 1453, 2071, 2392, 2419, 2461
BssNI GRCGYC 2 cut(s) 276, 1924
BssSI CACGAG 1 cut(s) 2025
BssT1I CCWWGG 4 cut(s) 1049, 1894, 2429, 2465
Bst2BI CACGAG 1 cut(s) 2025
Bst2UI CCWGG 2 cut(s) 624, 1596
Bst4CI ACNGT 4 cut(s) 460, 855, 2152, 2212
Bst6I CTCTTC 2 cut(s) 3, 924
BstACI GRCGYC 2 cut(s) 276, 1924
BstAPI GCANNNNNTGC 1 cut(s) 1494
BstAUI TGTACA 3 cut(s) 1111, 1327, 1738
BstBAI YACGTR 1 cut(s) 2390
BstC8I GCNNGC 5 cut(s) 82, 388, 1698, 1955, 2582
BstDEI CTNAG 6 cut(s) 338, 1062, 1139, 1725, 2510, 2655
BstDSI CCRYGG 1 cut(s) 1894
BstENI CCTNNNNNAGG 1 cut(s) 2544
BstF5I GGATG 8 cut(s) 421, 616, 1012, 1426, 1861, 1918, 2139, 2201
BstFNI CGCG 1 cut(s) 54
BstH2I RGCGCY 2 cut(s) 192, 2303
BstHHI GCGC 6 cut(s) 54, 191, 1499, 1732, 2279, 2302
BstKTI GATC 8 cut(s) 629, 1123, 1361, 1456, 2074, 2395, 2422, 2464
BstMAI GTCTC 2 cut(s) 723, 2497
BstMBI GATC 8 cut(s) 626, 1120, 1358, 1453, 2071, 2392, 2419, 2461
BstMWI GCNNNNNNNGC 6 cut(s) 77, 86, 392, 611, 1494, 2534
BstNI CCWGG 2 cut(s) 624, 1596
BstNSI RCATGY 1 cut(s) 1700
BstSCI CCNGG 3 cut(s) 294, 622, 1594
BstSFI CTRYAG 1 cut(s) 723
BstSLI GKGCMC 2 cut(s) 2069, 2314
BstUI CGCG 1 cut(s) 54
BstV1I GCAGC 5 cut(s) 598, 1239, 1440, 1653, 2512
BstV2I GAAGAC 7 cut(s) 680, 802, 886, 970, 1076, 1183, 1292
BstX2I RGATCY 2 cut(s) 626, 2461
BstYI RGATCY 2 cut(s) 626, 2461
Bsu15I ATCGAT 2 cut(s) 144, 2418
Bsu36I CCTNAGG 1 cut(s) 338
BsuTUI ATCGAT 2 cut(s) 144, 2418
BtgI CCRYGG 1 cut(s) 1894
BtsCI GGATG 8 cut(s) 421, 616, 1012, 1426, 1861, 1918, 2139, 2201
BtsIMutI CAGTG 4 cut(s) 777, 1274, 1997, 2067
Cac8I GCNNGC 5 cut(s) 82, 388, 1698, 1955, 2582
CaiI CAGNNNCTG 1 cut(s) 2581
CciI TCATGA 2 cut(s) 565, 1123
CfoI GCGC 6 cut(s) 54, 191, 1499, 1732, 2279, 2302
Cfr13I GGNCC 5 cut(s) 1781, 2310, 2311, 2383, 2578
ClaI ATCGAT 2 cut(s) 144, 2418
CseI GACGC 3 cut(s) 284, 1331, 1913
Csp6I GTAC 6 cut(s) 1112, 1328, 1434, 1509, 1526, 1739
CviQI GTAC 6 cut(s) 1112, 1328, 1434, 1509, 1526, 1739
DdeI CTNAG 6 cut(s) 338, 1062, 1139, 1725, 2510, 2655
DpnI GATC 8 cut(s) 628, 1122, 1360, 1455, 2073, 2394, 2421, 2463
DpnII GATC 8 cut(s) 626, 1120, 1358, 1453, 2071, 2392, 2419, 2461
DrdI GACNNNNNNGTC 1 cut(s) 2640
DseDI GACNNNNNNGTC 1 cut(s) 2640
EaeI YGGCCR 1 cut(s) 69
Eam1104I CTCTTC 2 cut(s) 3, 924
EarI CTCTTC 2 cut(s) 3, 924
Ecl136II GAGCTC 1 cut(s) 265
Eco130I CCWWGG 4 cut(s) 1049, 1894, 2429, 2465
Eco147I AGGCCT 5 cut(s) 871, 955, 1369, 2260, 2370
Eco24I GRGCYC 3 cut(s) 135, 267, 2314
Eco47I GGWCC 2 cut(s) 1781, 2383
Eco53kI GAGCTC 1 cut(s) 265
Eco57I CTGAAG 2 cut(s) 223, 1298
Eco81I CCTNAGG 1 cut(s) 338
Eco88I CYCGRG 1 cut(s) 1569
EcoICRI GAGCTC 1 cut(s) 265
EcoNI CCTNNNNNAGG 1 cut(s) 2544
EcoO109I RGGNCCY 4 cut(s) 1781, 2311, 2383, 2578
EcoRII CCWGG 2 cut(s) 622, 1594
EcoT14I CCWWGG 4 cut(s) 1049, 1894, 2429, 2465
EcoT38I GRGCYC 3 cut(s) 135, 267, 2314
ErhI CCWWGG 4 cut(s) 1049, 1894, 2429, 2465
FalI AAGNNNNNCTT 2 cut(s) 1734, 1766
FaqI GGGAC 5 cut(s) 122, 494, 2388, 2396, 2426
FauI CCCGC 2 cut(s) 47, 469
FbaI TGATCA 1 cut(s) 1453
Fnu4HI GCNGC 6 cut(s) 440, 612, 1228, 1429, 1642, 2526
FokI GGATG 8 cut(s) 428, 603, 1019, 1433, 1868, 1925, 2126, 2208
FriOI GRGCYC 3 cut(s) 135, 267, 2314
Fsp4HI GCNGC 6 cut(s) 440, 612, 1228, 1429, 1642, 2526
GlaI GCGC 6 cut(s) 53, 190, 1498, 1731, 2278, 2301
GluI GCNGC 6 cut(s) 440, 612, 1228, 1429, 1642, 2526
GsaI CCCAGC 1 cut(s) 2318
GsuI CTGGAG 4 cut(s) 477, 1617, 2079, 2635
HaeII RGCGCY 2 cut(s) 192, 2303
HapII CCGG 3 cut(s) 296, 1773, 2193
HgaI GACGC 3 cut(s) 284, 1331, 1913
HhaI GCGC 6 cut(s) 54, 191, 1499, 1732, 2279, 2302
Hin1I GRCGYC 2 cut(s) 276, 1924
Hin6I GCGC 6 cut(s) 52, 189, 1497, 1730, 2277, 2300
HinP1I GCGC 6 cut(s) 52, 189, 1497, 1730, 2277, 2300
HincII GTYRAC 3 cut(s) 997, 1157, 1210
HindII GTYRAC 3 cut(s) 997, 1157, 1210
HpaII CCGG 3 cut(s) 296, 1773, 2193
HphI GGTGA 6 cut(s) 296, 659, 1451, 1883, 2138, 2160
Hpy166II GTNNAC 4 cut(s) 997, 1157, 1210, 1321
Hpy188I TCNGA 9 cut(s) 242, 262, 406, 678, 859, 1063, 1690, 2332, 2533
Hpy8I GTNNAC 4 cut(s) 997, 1157, 1210, 1321
Hpy99I CGWCG 1 cut(s) 278
HpyAV CCTTC 2 cut(s) 275, 707
HpyCH4III ACNGT 4 cut(s) 460, 855, 2152, 2212
HpyCH4IV ACGT 2 cut(s) 1556, 2389
HpyF10VI GCNNNNNNNGC 6 cut(s) 77, 86, 392, 611, 1494, 2534
HpyF3I CTNAG 6 cut(s) 338, 1062, 1139, 1725, 2510, 2655
HpySE526I ACGT 2 cut(s) 1556, 2389
Hsp92I GRCGYC 2 cut(s) 276, 1924
HspAI GCGC 6 cut(s) 52, 189, 1497, 1730, 2277, 2300
Kpn2I TCCGGA 1 cut(s) 1772
Ksp22I TGATCA 1 cut(s) 1453
Kzo9I GATC 8 cut(s) 626, 1120, 1358, 1453, 2071, 2392, 2419, 2461
LmnI GCTCC 4 cut(s) 151, 761, 1504, 1638
Lsp1109I GCAGC 5 cut(s) 598, 1239, 1440, 1653, 2512
LweI GCATC 7 cut(s) 136, 1940, 1966, 2096, 2148, 2186, 2524
MaeII ACGT 2 cut(s) 1556, 2389
MaeIII GTNAC 5 cut(s) 572, 1343, 1995, 2126, 2542
MalI GATC 8 cut(s) 628, 1122, 1360, 1455, 2073, 2394, 2421, 2463
MboI GATC 8 cut(s) 626, 1120, 1358, 1453, 2071, 2392, 2419, 2461
MfeI CAATTG 4 cut(s) 162, 1018, 1254, 2031
MflI RGATCY 2 cut(s) 626, 2461
MhlI GDGCHC 4 cut(s) 135, 267, 2069, 2314
MlyI GAGTC 6 cut(s) 215, 869, 1162, 1348, 1561, 1674
MmeI TCCRAC 2 cut(s) 505, 1461
MroI TCCGGA 1 cut(s) 1772
MroXI GAANNNNTTC 2 cut(s) 236, 717
MseI TTAA 4 cut(s) 357, 1752, 1932, 2186
MspA1I CMGCKG 1 cut(s) 2357
MspI CCGG 3 cut(s) 296, 1773, 2193
MspR9I CCNGG 3 cut(s) 296, 624, 1596
MunI CAATTG 4 cut(s) 162, 1018, 1254, 2031
Mva1269I GAATGC 2 cut(s) 1069, 1285
MvaI CCWGG 2 cut(s) 624, 1596
MvnI CGCG 1 cut(s) 54
MwoI GCNNNNNNNGC 6 cut(s) 77, 86, 392, 611, 1494, 2534
NciI CCSGG 1 cut(s) 296
NcoI CCATGG 1 cut(s) 1894
NdeII GATC 8 cut(s) 626, 1120, 1358, 1453, 2071, 2392, 2419, 2461
NmuCI GTSAC 3 cut(s) 572, 1995, 2126
NspI RCATGY 1 cut(s) 1700
PaeI GCATGC 1 cut(s) 1700
PaeR7I CTCGAG 1 cut(s) 1569
PagI TCATGA 2 cut(s) 565, 1123
PceI AGGCCT 5 cut(s) 871, 955, 1369, 2260, 2370
PctI GAATGC 2 cut(s) 1069, 1285
PdmI GAANNNNTTC 2 cut(s) 236, 717
PflFI GACNNNGTC 1 cut(s) 1779
PflMI CCANNNNNTGG 1 cut(s) 659
PfoI TCCNGGA 1 cut(s) 294
PkrI GCNGC 6 cut(s) 441, 613, 1229, 1430, 1643, 2527
PleI GAGTC 6 cut(s) 215, 868, 1161, 1348, 1561, 1673
PpsI GAGTC 6 cut(s) 215, 868, 1161, 1348, 1561, 1673
Ppu21I YACGTR 1 cut(s) 2390
PpuMI RGGWCCY 2 cut(s) 1781, 2383
Psp124BI GAGCTC 1 cut(s) 267
Psp5II RGGWCCY 2 cut(s) 1781, 2383
Psp6I CCWGG 2 cut(s) 622, 1594
PspFI CCCAGC 1 cut(s) 2314
PspGI CCWGG 2 cut(s) 622, 1594
PspOMI GGGCCC 1 cut(s) 2310
PspPI GGNCC 5 cut(s) 1781, 2310, 2311, 2383, 2578
PspPPI RGGWCCY 2 cut(s) 1781, 2383
PspXI VCTCGAGB 1 cut(s) 1569
PstNI CAGNNNCTG 1 cut(s) 2581
PsuI RGATCY 2 cut(s) 626, 2461
PsyI GACNNNGTC 1 cut(s) 1779
RsaI GTAC 6 cut(s) 1113, 1329, 1435, 1510, 1527, 1740
RsaNI GTAC 6 cut(s) 1112, 1328, 1434, 1509, 1526, 1739
SacI GAGCTC 1 cut(s) 267
SaqAI TTAA 4 cut(s) 357, 1752, 1932, 2186
SatI GCNGC 6 cut(s) 440, 612, 1228, 1429, 1642, 2526
Sau3AI GATC 8 cut(s) 626, 1120, 1358, 1453, 2071, 2392, 2419, 2461
Sau96I GGNCC 5 cut(s) 1781, 2310, 2311, 2383, 2578
ScaI AGTACT 1 cut(s) 1510
SchI GAGTC 6 cut(s) 215, 869, 1162, 1348, 1561, 1674
ScrFI CCNGG 3 cut(s) 296, 624, 1596
SduI GDGCHC 4 cut(s) 135, 267, 2069, 2314
SfaNI GCATC 7 cut(s) 136, 1940, 1966, 2096, 2148, 2186, 2524
SfcI CTRYAG 1 cut(s) 723
Sfr274I CTCGAG 1 cut(s) 1569
SinI GGWCC 2 cut(s) 1781, 2383
SlaI CTCGAG 1 cut(s) 1569
SmlI CTYRAG 7 cut(s) 178, 1098, 1314, 1512, 1569, 1676, 2247
SmoI CTYRAG 7 cut(s) 178, 1098, 1314, 1512, 1569, 1676, 2247
SphI GCATGC 1 cut(s) 1700
SseBI AGGCCT 5 cut(s) 871, 955, 1369, 2260, 2370
SsiI CCGC 6 cut(s) 54, 95, 149, 439, 476, 2355
SspI AATATT 1 cut(s) 1616
SstI GAGCTC 1 cut(s) 267
StuI AGGCCT 5 cut(s) 871, 955, 1369, 2260, 2370
StyD4I CCNGG 3 cut(s) 294, 622, 1594
StyI CCWWGG 4 cut(s) 1049, 1894, 2429, 2465
TaaI ACNGT 4 cut(s) 460, 855, 2152, 2212
TaiI ACGT 2 cut(s) 1559, 2392
TatI WGTACW 4 cut(s) 1111, 1327, 1508, 1738
TauI GCSGC 1 cut(s) 442
Tru1I TTAA 4 cut(s) 357, 1752, 1932, 2186
Tru9I TTAA 4 cut(s) 357, 1752, 1932, 2186
TscAI CASTG 4 cut(s) 784, 1281, 2004, 2074
TseFI GTSAC 3 cut(s) 572, 1995, 2126
TseI GCWGC 5 cut(s) 611, 1227, 1428, 1641, 2525
Tsp45I GTSAC 3 cut(s) 572, 1995, 2126
TspGWI ACGGA 2 cut(s) 1307, 2390
TspRI CASTG 4 cut(s) 784, 1281, 2004, 2074
Tth111I GACNNNGTC 1 cut(s) 1779
Van91I CCANNNNNTGG 1 cut(s) 659
VpaK11BI GGWCC 2 cut(s) 1781, 2383
XagI CCTNNNNNAGG 1 cut(s) 2544
XapI RAATTY 2 cut(s) 1105, 2375
XceI RCATGY 1 cut(s) 1700
XhoI CTCGAG 1 cut(s) 1569
XmnI GAANNNNTTC 2 cut(s) 236, 717
ZrmI AGTACT 1 cut(s) 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.