WD40 repeats
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19485 AT1G19485 |
| fragaria_vesca | FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_7g02500 |
| malus_domestica | MD09G1081300.v1.1 MD12G1022600.v1.1 |
| prunus_persica | Prupe.7G114200_v2.0.a1 Prupe.7G114200_v2.0.a1 |
| pyrus_communis | pycom09g00800 pycom12g02090 |
| rosa_chinensis | RchiOBHm_Chr3g0472691 RchiOBHm_Chr3g0472701 RchiOBHm_Chr4g0409331 |
| rosa_laevigata | RLG00000008568 RLG00000016132 RLG00000024063 |
| rosa_multiflora | Rmu_co8285783.1_g000001 Rmu_sc0001616.1_g000052 Rmu_sc0001616.1_g000057 Rmu_sc0001851.1_g000016 Rmu_sc0003510.1_g000010 Rmu_sc0003510.1_g000011 Rmu_sc0003510.1_g000012 Rmu_sc0034965.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00353840 Rroxscaffold_6G00408710 |
| rosa_rugosa | Rorug03G0127200 Rorug04G0092400 Rorug04G0092500 |
| rosa_samantha | Rh3AG179900 Rh3BG205800 Rh3CG202900 Rh3DG169900 Rh4AG155600 Rh4BG153800 Rh4CG164600 Rh4DG148500 |
| rosa_wichuraiana | Rw3G016270 Rw4G012710 Rw4G012730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 144 |
| AciI | CCGC | 1 cut(s) | 193 |
| AcyI | GRCGYC | 1 cut(s) | 30 |
| AgsI | TTSAA | 1 cut(s) | 65 |
| AluBI | AGCT | 3 cut(s) | 19, 156, 199 |
| AluI | AGCT | 3 cut(s) | 19, 156, 199 |
| Alw21I | GWGCWC | 1 cut(s) | 21 |
| AoxI | GGCC | 1 cut(s) | 250 |
| ApeKI | GCWGC | 1 cut(s) | 196 |
| AsuC2I | CCSGG | 1 cut(s) | 50 |
| AsuHPI | GGTGA | 3 cut(s) | 38, 64, 247 |
| AxyI | CCTNAGG | 1 cut(s) | 92 |
| BanII | GRGCYC | 1 cut(s) | 21 |
| Bbv12I | GWGCWC | 1 cut(s) | 21 |
| BbvI | GCAGC | 1 cut(s) | 208 |
| BcnI | CCSGG | 1 cut(s) | 50 |
| BfaI | CTAG | 1 cut(s) | 123 |
| BisI | GCNGC | 2 cut(s) | 194, 197 |
| BlsI | GCNGC | 2 cut(s) | 195, 198 |
| Bme1390I | CCNGG | 1 cut(s) | 50 |
| BmrFI | CCNGG | 1 cut(s) | 50 |
| BmsI | GCATC | 1 cut(s) | 136 |
| BpuMI | CCSGG | 1 cut(s) | 50 |
| BsaHI | GRCGYC | 1 cut(s) | 30 |
| Bse21I | CCTNAGG | 1 cut(s) | 92 |
| BseGI | GGATG | 1 cut(s) | 175 |
| BseMII | CTCAG | 1 cut(s) | 83 |
| BseRI | GAGGAG | 1 cut(s) | 179 |
| BseXI | GCAGC | 1 cut(s) | 208 |
| Bsh1236I | CGCG | 1 cut(s) | 144 |
| BshFI | GGCC | 1 cut(s) | 252 |
| BsiHKAI | GWGCWC | 1 cut(s) | 21 |
| BsiSI | CCGG | 1 cut(s) | 50 |
| BsnI | GGCC | 1 cut(s) | 252 |
| Bsp1286I | GDGCHC | 1 cut(s) | 21 |
| Bsp68I | TCGCGA | 1 cut(s) | 144 |
| BspACI | CCGC | 1 cut(s) | 193 |
| BspANI | GGCC | 1 cut(s) | 252 |
| BspCNI | CTCAG | 1 cut(s) | 84 |
| BspFNI | CGCG | 1 cut(s) | 144 |
| BssNI | GRCGYC | 1 cut(s) | 30 |
| BstACI | GRCGYC | 1 cut(s) | 30 |
| BstC8I | GCNNGC | 1 cut(s) | 142 |
| BstDEI | CTNAG | 1 cut(s) | 92 |
| BstF5I | GGATG | 1 cut(s) | 175 |
| BstFNI | CGCG | 1 cut(s) | 144 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 146 |
| BstSCI | CCNGG | 1 cut(s) | 48 |
| BstUI | CGCG | 1 cut(s) | 144 |
| BstV1I | GCAGC | 1 cut(s) | 208 |
| Bsu36I | CCTNAGG | 1 cut(s) | 92 |
| BsuRI | GGCC | 1 cut(s) | 252 |
| BtgZI | GCGATG | 1 cut(s) | 159 |
| BtsCI | GGATG | 1 cut(s) | 175 |
| BtuMI | TCGCGA | 1 cut(s) | 144 |
| Cac8I | GCNNGC | 1 cut(s) | 142 |
| CseI | GACGC | 1 cut(s) | 38 |
| CviJI | RGCY | 5 cut(s) | 19, 43, 156, 199, 252 |
| CviKI_1 | RGCY | 5 cut(s) | 19, 43, 156, 199, 252 |
| DdeI | CTNAG | 1 cut(s) | 92 |
| Ecl136II | GAGCTC | 1 cut(s) | 19 |
| Eco24I | GRGCYC | 1 cut(s) | 21 |
| Eco53kI | GAGCTC | 1 cut(s) | 19 |
| Eco81I | CCTNAGG | 1 cut(s) | 92 |
| EcoICRI | GAGCTC | 1 cut(s) | 19 |
| EcoT38I | GRGCYC | 1 cut(s) | 21 |
| FaiI | YATR | 2 cut(s) | 117, 246 |
| Fnu4HI | GCNGC | 2 cut(s) | 194, 197 |
| FokI | GGATG | 1 cut(s) | 182 |
| FriOI | GRGCYC | 1 cut(s) | 21 |
| Fsp4HI | GCNGC | 2 cut(s) | 194, 197 |
| FspBI | CTAG | 1 cut(s) | 123 |
| GluI | GCNGC | 2 cut(s) | 194, 197 |
| HaeIII | GGCC | 1 cut(s) | 252 |
| HapII | CCGG | 1 cut(s) | 50 |
| HgaI | GACGC | 1 cut(s) | 38 |
| Hin1I | GRCGYC | 1 cut(s) | 30 |
| HindIII | AAGCTT | 1 cut(s) | 154 |
| HinfI | GANTC | 1 cut(s) | 135 |
| HpaII | CCGG | 1 cut(s) | 50 |
| HphI | GGTGA | 3 cut(s) | 38, 64, 247 |
| Hpy188I | TCNGA | 1 cut(s) | 16 |
| Hpy188III | TCNNGA | 2 cut(s) | 91, 143 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 149, 209 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 146 |
| HpyF3I | CTNAG | 1 cut(s) | 92 |
| Hsp92I | GRCGYC | 1 cut(s) | 30 |
| LpnPI | CCDG | 3 cut(s) | 63, 104, 206 |
| Lsp1109I | GCAGC | 1 cut(s) | 208 |
| LweI | GCATC | 1 cut(s) | 136 |
| MaeI | CTAG | 1 cut(s) | 123 |
| MaeIII | GTNAC | 4 cut(s) | 26, 56, 223, 235 |
| MboII | GAAGA | 1 cut(s) | 195 |
| MhlI | GDGCHC | 1 cut(s) | 21 |
| MluCI | AATT | 1 cut(s) | 261 |
| MnlI | CCTC | 4 cut(s) | 87, 88, 157, 160 |
| MseI | TTAA | 1 cut(s) | 111 |
| MspI | CCGG | 1 cut(s) | 50 |
| MspR9I | CCNGG | 1 cut(s) | 50 |
| MvnI | CGCG | 1 cut(s) | 144 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 146 |
| NciI | CCSGG | 1 cut(s) | 50 |
| NmuCI | GTSAC | 3 cut(s) | 26, 56, 235 |
| NruI | TCGCGA | 1 cut(s) | 144 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 36 |
| PfeI | GAWTC | 1 cut(s) | 135 |
| PkrI | GCNGC | 2 cut(s) | 195, 198 |
| Psp124BI | GAGCTC | 1 cut(s) | 21 |
| RruI | TCGCGA | 1 cut(s) | 144 |
| SacI | GAGCTC | 1 cut(s) | 21 |
| SaqAI | TTAA | 1 cut(s) | 111 |
| SatI | GCNGC | 2 cut(s) | 194, 197 |
| ScrFI | CCNGG | 1 cut(s) | 50 |
| SduI | GDGCHC | 1 cut(s) | 21 |
| SetI | ASST | 5 cut(s) | 21, 124, 158, 201, 225 |
| SfaNI | GCATC | 1 cut(s) | 136 |
| Sse9I | AATT | 1 cut(s) | 261 |
| SsiI | CCGC | 1 cut(s) | 193 |
| SspMI | CTAG | 1 cut(s) | 123 |
| SstI | GAGCTC | 1 cut(s) | 21 |
| StyD4I | CCNGG | 1 cut(s) | 48 |
| TaqI | TCGA | 1 cut(s) | 133 |
| TasI | AATT | 1 cut(s) | 261 |
| TauI | GCSGC | 1 cut(s) | 196 |
| TfiI | GAWTC | 1 cut(s) | 135 |
| Tru1I | TTAA | 1 cut(s) | 111 |
| Tru9I | TTAA | 1 cut(s) | 111 |
| TseFI | GTSAC | 3 cut(s) | 26, 56, 235 |
| TseI | GCWGC | 1 cut(s) | 196 |
| Tsp45I | GTSAC | 3 cut(s) | 26, 56, 235 |
| TspDTI | ATGAA | 1 cut(s) | 132 |
| XspI | CTAG | 1 cut(s) | 123 |