WD40 repeats
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19485 AT1G19485 |
| fragaria_vesca | FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_7g02500 |
| malus_domestica | MD09G1081300.v1.1 MD12G1022600.v1.1 |
| prunus_persica | Prupe.7G114200_v2.0.a1 Prupe.7G114200_v2.0.a1 |
| pyrus_communis | pycom09g00800 pycom12g02090 |
| rosa_chinensis | RchiOBHm_Chr3g0472691 RchiOBHm_Chr3g0472701 RchiOBHm_Chr4g0409331 |
| rosa_laevigata | RLG00000008568 RLG00000016132 RLG00000024063 |
| rosa_multiflora | Rmu_co8285783.1_g000001 Rmu_sc0001616.1_g000052 Rmu_sc0001616.1_g000057 Rmu_sc0001851.1_g000016 Rmu_sc0003510.1_g000010 Rmu_sc0003510.1_g000011 Rmu_sc0003510.1_g000012 Rmu_sc0034965.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00353840 Rroxscaffold_6G00408710 |
| rosa_rugosa | Rorug03G0127200 Rorug04G0092400 Rorug04G0092500 |
| rosa_samantha | Rh3AG179900 Rh3BG205800 Rh3CG202900 Rh3DG169900 Rh4AG155600 Rh4BG153800 Rh4CG164600 Rh4DG148500 |
| rosa_wichuraiana | Rw3G016270 Rw4G012710 Rw4G012730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 188 |
| AcuI | CTGAAG | 1 cut(s) | 399 |
| AfaI | GTAC | 1 cut(s) | 144 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 251, 333 |
| AgsI | TTSAA | 2 cut(s) | 113, 193 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 201, 233 |
| AluBI | AGCT | 2 cut(s) | 241, 377 |
| AluI | AGCT | 2 cut(s) | 241, 377 |
| Alw21I | GWGCWC | 1 cut(s) | 397 |
| ApoI | RAATTY | 1 cut(s) | 188 |
| AsuHPI | GGTGA | 2 cut(s) | 218, 332 |
| Bbv12I | GWGCWC | 1 cut(s) | 397 |
| BccI | CCATC | 1 cut(s) | 59 |
| BclI | TGATCA | 1 cut(s) | 127 |
| BfaI | CTAG | 1 cut(s) | 122 |
| BmiI | GGNNCC | 1 cut(s) | 325 |
| BpmI | CTGGAG | 1 cut(s) | 449 |
| BpuEI | CTTGAG | 1 cut(s) | 263 |
| BsaWI | WCCGGW | 1 cut(s) | 259 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 246, 276 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 251, 333 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 251, 333 |
| BsiHKAI | GWGCWC | 1 cut(s) | 397 |
| BsiSI | CCGG | 1 cut(s) | 260 |
| BslFI | GGGAC | 1 cut(s) | 121 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 251, 333 |
| BsmFI | GGGAC | 1 cut(s) | 121 |
| Bsp1286I | GDGCHC | 1 cut(s) | 397 |
| Bsp143I | GATC | 1 cut(s) | 127 |
| BspLI | GGNNCC | 1 cut(s) | 325 |
| BssMI | GATC | 1 cut(s) | 127 |
| Bst4CI | ACNGT | 2 cut(s) | 43, 422 |
| BstC8I | GCNNGC | 3 cut(s) | 385, 389, 393 |
| BstKTI | GATC | 1 cut(s) | 130 |
| BstMBI | GATC | 1 cut(s) | 127 |
| BstNSI | RCATGY | 1 cut(s) | 415 |
| BtsIMutI | CAGTG | 1 cut(s) | 238 |
| Cac8I | GCNNGC | 3 cut(s) | 385, 389, 393 |
| Csp6I | GTAC | 1 cut(s) | 143 |
| CviAII | CATG | 3 cut(s) | 140, 344, 412 |
| CviJI | RGCY | 5 cut(s) | 38, 50, 241, 266, 377 |
| CviKI_1 | RGCY | 5 cut(s) | 38, 50, 241, 266, 377 |
| CviQI | GTAC | 1 cut(s) | 143 |
| DpnI | GATC | 1 cut(s) | 129 |
| DpnII | GATC | 1 cut(s) | 127 |
| DraI | TTTAAA | 1 cut(s) | 66 |
| Eco57I | CTGAAG | 1 cut(s) | 399 |
| EcoRI | GAATTC | 1 cut(s) | 188 |
| FaeI | CATG | 3 cut(s) | 143, 347, 415 |
| FaiI | YATR | 9 cut(s) | 16, 141, 162, 170, 269, 345, 405, 413, 451 |
| FaqI | GGGAC | 1 cut(s) | 121 |
| FatI | CATG | 3 cut(s) | 139, 343, 411 |
| FbaI | TGATCA | 1 cut(s) | 127 |
| FspBI | CTAG | 1 cut(s) | 122 |
| GsuI | CTGGAG | 1 cut(s) | 449 |
| HapII | CCGG | 1 cut(s) | 260 |
| Hin1II | CATG | 3 cut(s) | 143, 347, 415 |
| HindIII | AAGCTT | 1 cut(s) | 239 |
| HinfI | GANTC | 2 cut(s) | 284, 337 |
| HpaII | CCGG | 1 cut(s) | 260 |
| HphI | GGTGA | 2 cut(s) | 218, 332 |
| Hpy166II | GTNNAC | 1 cut(s) | 349 |
| Hpy188I | TCNGA | 1 cut(s) | 246 |
| Hpy188III | TCNNGA | 2 cut(s) | 193, 428 |
| Hpy8I | GTNNAC | 1 cut(s) | 349 |
| HpyAV | CCTTC | 1 cut(s) | 203 |
| HpyCH4III | ACNGT | 2 cut(s) | 43, 422 |
| HpyCH4IV | ACGT | 1 cut(s) | 351 |
| HpySE526I | ACGT | 1 cut(s) | 351 |
| Hsp92II | CATG | 3 cut(s) | 143, 347, 415 |
| Ksp22I | TGATCA | 1 cut(s) | 127 |
| Kzo9I | GATC | 1 cut(s) | 127 |
| LpnPI | CCDG | 3 cut(s) | 273, 369, 413 |
| MaeI | CTAG | 1 cut(s) | 122 |
| MaeII | ACGT | 1 cut(s) | 351 |
| MalI | GATC | 1 cut(s) | 129 |
| MboI | GATC | 1 cut(s) | 127 |
| MboII | GAAGA | 3 cut(s) | 46, 187, 208 |
| MhlI | GDGCHC | 1 cut(s) | 397 |
| MluCI | AATT | 1 cut(s) | 188 |
| MnlI | CCTC | 3 cut(s) | 79, 206, 287 |
| MseI | TTAA | 2 cut(s) | 65, 312 |
| MspA1I | CMGCKG | 1 cut(s) | 377 |
| MspI | CCGG | 1 cut(s) | 260 |
| NdeII | GATC | 1 cut(s) | 127 |
| NlaIII | CATG | 3 cut(s) | 143, 347, 415 |
| NlaIV | GGNNCC | 1 cut(s) | 325 |
| NspI | RCATGY | 1 cut(s) | 415 |
| PfeI | GAWTC | 2 cut(s) | 284, 337 |
| PspN4I | GGNNCC | 1 cut(s) | 325 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 339, 371 |
| PvuII | CAGCTG | 1 cut(s) | 377 |
| RsaI | GTAC | 1 cut(s) | 144 |
| RsaNI | GTAC | 1 cut(s) | 143 |
| SaqAI | TTAA | 2 cut(s) | 65, 312 |
| Sau3AI | GATC | 1 cut(s) | 127 |
| SduI | GDGCHC | 1 cut(s) | 397 |
| SetI | ASST | 4 cut(s) | 217, 243, 354, 379 |
| SmlI | CTYRAG | 1 cut(s) | 278 |
| SmoI | CTYRAG | 1 cut(s) | 278 |
| Sse9I | AATT | 1 cut(s) | 188 |
| SspMI | CTAG | 1 cut(s) | 122 |
| TaaI | ACNGT | 2 cut(s) | 43, 422 |
| TaiI | ACGT | 1 cut(s) | 354 |
| TasI | AATT | 1 cut(s) | 188 |
| TfiI | GAWTC | 2 cut(s) | 284, 337 |
| Tru1I | TTAA | 2 cut(s) | 65, 312 |
| Tru9I | TTAA | 2 cut(s) | 65, 312 |
| TscAI | CASTG | 1 cut(s) | 238 |
| TspDTI | ATGAA | 3 cut(s) | 201, 330, 420 |
| TspRI | CASTG | 1 cut(s) | 238 |
| XapI | RAATTY | 1 cut(s) | 188 |
| XceI | RCATGY | 1 cut(s) | 415 |
| XspI | CTAG | 1 cut(s) | 122 |