WD40 repeats
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19485 AT1G19485 |
| fragaria_vesca | FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_7g02500 |
| malus_domestica | MD09G1081300.v1.1 MD12G1022600.v1.1 |
| prunus_persica | Prupe.7G114200_v2.0.a1 Prupe.7G114200_v2.0.a1 |
| pyrus_communis | pycom09g00800 pycom12g02090 |
| rosa_chinensis | RchiOBHm_Chr3g0472691 RchiOBHm_Chr3g0472701 RchiOBHm_Chr4g0409331 |
| rosa_laevigata | RLG00000008568 RLG00000016132 RLG00000024063 |
| rosa_multiflora | Rmu_co8285783.1_g000001 Rmu_sc0001616.1_g000052 Rmu_sc0001616.1_g000057 Rmu_sc0001851.1_g000016 Rmu_sc0003510.1_g000010 Rmu_sc0003510.1_g000011 Rmu_sc0003510.1_g000012 Rmu_sc0034965.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00353840 Rroxscaffold_6G00408710 |
| rosa_rugosa | Rorug03G0127200 Rorug04G0092400 Rorug04G0092500 |
| rosa_samantha | Rh3AG179900 Rh3BG205800 Rh3CG202900 Rh3DG169900 Rh4AG155600 Rh4BG153800 Rh4CG164600 Rh4DG148500 |
| rosa_wichuraiana | Rw3G016270 Rw4G012710 Rw4G012730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 155 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 146 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 146 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 294, 326 |
| Alw26I | GTCTC | 1 cut(s) | 210 |
| AoxI | GGCC | 3 cut(s) | 321, 353, 405 |
| ApeKI | GCWGC | 1 cut(s) | 98 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 204 |
| AsuHPI | GGTGA | 1 cut(s) | 146 |
| BanI | GGYRCC | 1 cut(s) | 155 |
| BbsI | GAAGAC | 4 cut(s) | 167, 286, 370, 453 |
| BbvI | GCAGC | 1 cut(s) | 85 |
| BcoDI | GTCTC | 1 cut(s) | 210 |
| BfaI | CTAG | 5 cut(s) | 111, 186, 357, 369, 440 |
| BfmI | CTRYAG | 1 cut(s) | 210 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 352 |
| BglII | AGATCT | 1 cut(s) | 113 |
| BisI | GCNGC | 1 cut(s) | 99 |
| BlsI | GCNGC | 1 cut(s) | 100 |
| BmiI | GGNNCC | 2 cut(s) | 157, 247 |
| BpiI | GAAGAC | 4 cut(s) | 167, 286, 370, 453 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 146 |
| Bse1I | ACTGG | 1 cut(s) | 151 |
| Bse3DI | GCAATG | 1 cut(s) | 93 |
| BseGI | GGATG | 1 cut(s) | 103 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 146 |
| BseMI | GCAATG | 1 cut(s) | 93 |
| BseMII | CTCAG | 1 cut(s) | 333 |
| BseNI | ACTGG | 1 cut(s) | 151 |
| BseRI | GAGGAG | 1 cut(s) | 59 |
| BseXI | GCAGC | 1 cut(s) | 85 |
| BshFI | GGCC | 3 cut(s) | 323, 355, 407 |
| BshNI | GGYRCC | 1 cut(s) | 155 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 146 |
| BsmAI | GTCTC | 1 cut(s) | 210 |
| BsnI | GGCC | 3 cut(s) | 323, 355, 407 |
| Bsp143I | GATC | 1 cut(s) | 113 |
| BspANI | GGCC | 3 cut(s) | 323, 355, 407 |
| BspCNI | CTCAG | 1 cut(s) | 334 |
| BspLI | GGNNCC | 2 cut(s) | 157, 247 |
| BspT107I | GGYRCC | 1 cut(s) | 155 |
| BsrDI | GCAATG | 1 cut(s) | 93 |
| BsrI | ACTGG | 1 cut(s) | 151 |
| BssMI | GATC | 1 cut(s) | 113 |
| Bst4CI | ACNGT | 1 cut(s) | 339 |
| Bst6I | CTCTTC | 1 cut(s) | 408 |
| BstDEI | CTNAG | 1 cut(s) | 342 |
| BstF5I | GGATG | 1 cut(s) | 103 |
| BstKTI | GATC | 1 cut(s) | 116 |
| BstMAI | GTCTC | 1 cut(s) | 210 |
| BstMBI | GATC | 1 cut(s) | 113 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 98, 352 |
| BstSFI | CTRYAG | 1 cut(s) | 210 |
| BstV1I | GCAGC | 1 cut(s) | 85 |
| BstV2I | GAAGAC | 4 cut(s) | 167, 286, 370, 453 |
| BstX2I | RGATCY | 1 cut(s) | 113 |
| BstYI | RGATCY | 1 cut(s) | 113 |
| BsuRI | GGCC | 3 cut(s) | 323, 355, 407 |
| BtsCI | GGATG | 1 cut(s) | 103 |
| BtsIMutI | CAGTG | 1 cut(s) | 261 |
| CviJI | RGCY | 9 cut(s) | 139, 248, 295, 323, 346, 355, 379, 407, 438 |
| CviKI_1 | RGCY | 9 cut(s) | 139, 248, 295, 323, 346, 355, 379, 407, 438 |
| DdeI | CTNAG | 1 cut(s) | 342 |
| DpnI | GATC | 1 cut(s) | 115 |
| DpnII | GATC | 1 cut(s) | 113 |
| Eam1104I | CTCTTC | 1 cut(s) | 408 |
| EarI | CTCTTC | 1 cut(s) | 408 |
| Eco147I | AGGCCT | 1 cut(s) | 355 |
| FaiI | YATR | 2 cut(s) | 169, 212 |
| Fnu4HI | GCNGC | 1 cut(s) | 99 |
| FokI | GGATG | 1 cut(s) | 90 |
| Fsp4HI | GCNGC | 1 cut(s) | 99 |
| FspBI | CTAG | 5 cut(s) | 111, 186, 357, 369, 440 |
| GluI | GCNGC | 1 cut(s) | 99 |
| HaeIII | GGCC | 3 cut(s) | 323, 355, 407 |
| HinfI | GANTC | 2 cut(s) | 305, 389 |
| HphI | GGTGA | 1 cut(s) | 146 |
| Hpy188I | TCNGA | 2 cut(s) | 165, 343 |
| HpyCH4III | ACNGT | 1 cut(s) | 339 |
| HpyCH4V | TGCA | 1 cut(s) | 261 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 98, 352 |
| HpyF3I | CTNAG | 1 cut(s) | 342 |
| Kzo9I | GATC | 1 cut(s) | 113 |
| LmnI | GCTCC | 1 cut(s) | 245 |
| LpnPI | CCDG | 2 cut(s) | 132, 298 |
| Lsp1109I | GCAGC | 1 cut(s) | 85 |
| MaeI | CTAG | 5 cut(s) | 111, 186, 357, 369, 440 |
| MaeIII | GTNAC | 1 cut(s) | 18 |
| MalI | GATC | 1 cut(s) | 115 |
| MboI | GATC | 1 cut(s) | 113 |
| MflI | RGATCY | 1 cut(s) | 113 |
| MluCI | AATT | 1 cut(s) | 61 |
| MroXI | GAANNNNTTC | 1 cut(s) | 204 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 98, 352 |
| NdeII | GATC | 1 cut(s) | 113 |
| NlaIV | GGNNCC | 2 cut(s) | 157, 247 |
| PceI | AGGCCT | 1 cut(s) | 355 |
| PdmI | GAANNNNTTC | 1 cut(s) | 204 |
| PfeI | GAWTC | 2 cut(s) | 305, 389 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 146 |
| PkrI | GCNGC | 1 cut(s) | 100 |
| PspN4I | GGNNCC | 2 cut(s) | 157, 247 |
| PsuI | RGATCY | 1 cut(s) | 113 |
| SatI | GCNGC | 1 cut(s) | 99 |
| Sau3AI | GATC | 1 cut(s) | 113 |
| SetI | ASST | 3 cut(s) | 136, 157, 370 |
| SfcI | CTRYAG | 1 cut(s) | 210 |
| Sse9I | AATT | 1 cut(s) | 61 |
| SseBI | AGGCCT | 1 cut(s) | 355 |
| SspMI | CTAG | 5 cut(s) | 111, 186, 357, 369, 440 |
| StuI | AGGCCT | 1 cut(s) | 355 |
| TaaI | ACNGT | 1 cut(s) | 339 |
| TasI | AATT | 1 cut(s) | 61 |
| TfiI | GAWTC | 2 cut(s) | 305, 389 |
| TscAI | CASTG | 1 cut(s) | 268 |
| TseI | GCWGC | 1 cut(s) | 98 |
| TspDTI | ATGAA | 3 cut(s) | 17, 74, 213 |
| TspRI | CASTG | 1 cut(s) | 268 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 146 |
| XmnI | GAANNNNTTC | 1 cut(s) | 204 |
| XspI | CTAG | 5 cut(s) | 111, 186, 357, 369, 440 |