Rh4DG148500

WD40 repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0002231
Physical Location & Seq
Forward (+)
29736261 .. 29748250
11990 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG148500.1

Sequence Viewer

Length: 2823 bp
ATGTATGTTGGAGGGCCTGTTTGGGCATTGGATTGGTGTCCTAGAGTTCATGAAAGTCACGACCGTCATGCAAAGTGCGAGTTTATTGCCATTGCTGCTCATCCCCCTGGATCTTCTTATCACAAGTTAGGTGAGCCACTTACTGGCAGAGGTGCCATTCAGATATGGTGTCTTCTAAATGCTAGTGTAAATGATGAAGGTGTTCCTATAGGAGATAAACCAAAAGGAGGAAATAAAAGGAGTGGAGCCACAGAAAAATGCACTGAACAAAAAAGGGGAAGACCCAGAAAGAAGCCATTAGAAGAATCTGTTGGCAAAGAGGCCACAGAAGAAAAACTGTCTGAGCCAAAAAGGCCGAGAGGAAGACCTAGAAAGAAGCCAATAGAAGAATCTATTGACAAAGAGGCCAAAGAAGAGAAATCAACTCAACCAAAGAGGCCTAGAGGAAGACCTAGAAATAAATCAATAGAAGAATCTGTTGACAACTTGGATGGTCTCACCAATTGTGATGAGGTTCTTGCTATTGATTATCCAAAGGAATCATCTGAGTTGCATTCTATGGATTGTCTTCCTGCAAATACTCAAGGAAATTTTGTACAAGAATATCATGGCAAAAAGCAACTAAGTTATGGGCAGAGTCGACCGAAGAAGCCTAGAGGAAGACCCAGAAAGAAGCCAATAAAAGAACCTGTTGACAATTTAGATGGGGGCAACAATAATTTTGAGGTTCTTGCCATTGAATACCAAAAGGAATCACTGGAGTTGCATTCTACGGATTGTCTTCTTGCAAATACTCAAGTGGACGCTGTACAAGAAACAAGTTACAAGCAGACTCGATCAAAGAGGCCTAGAGGCATACATGGAAAGAAGCCAATAGAAGAATCTGTTGAAAACTTGGATGACAGCAGCAATACGGGTGAGGCTCTTGATGATCAATATCCAAAGGAATTATTGGAGTTGGAGGGCAGGGTTTGCGCTCCTGAAAATACTCAAGGAGATGAGGTACAAGATGATAGTGGTAAGAAAAGAAAAACGTACAGAAAGACTCGAGCAAAGATTCCTAGAGAAAAACCTGGGGAGAAGCTAGTAGAATATTCTGTTGATAACTTGCATGGGAGCAGCCATTATGCGGAGGCTCTTGGAGTCCAATATCTCAAGGAAACATCAGAGTTGCATGCTATGGATTGTGTTCCTGCATTTACTCAGGCGCATGATGTACAAGAAGCTCTTAATGAAAAACTTGAAAGTTCCGGACCGGGTCCTCAAACAAATAATAATGTTTCAAATAATGGTTATGCTGAAATTGGCTCAATTAGGTGTTCAGTTCCAAAGGATGTAGCATTGCCAAGAATCATGTTCTGCCTAGCTCACCATGGAAAGGTTGCTTGGGATGTGAAATGGCGTCCTCTTAATGAACATGATTCCAGATGCAAGCATCGAATGGGCTATCTTGCTGTTCTGTTGGGGAACGGGTCTCTGGAAGTGTGGGAGGTTCCTGTTCCTCGTGCAATTGAAGTTATTTATTCTTCTTCATCTGGAGAGGGCACTGATCCTCGCTTTGTAAAATTGGCACCAGTATTTAGATGCTCAATGTTGAAGTCTGGTGACAAAAAAAGCATCCCTCTTACTGTGGAATGGTCAGCTTCACCACCTCACGATTACTTAATTGCCGGATGCCATGATGGAACTGTTGCTATGTGGAAGTTTTCTGCTAGTAATGTATCTCAAGATACAAGGCCTTTACTTTGTTTCAGCGCAGATACAAATCCTATTAGGGCGCTTTCTTGGGCCCCAGCTCAAAGCAATTCAGACAATGCAAATGTTATAGCTACTGCTGGACATGGAGGCCTAAAATTTTGGGACCTACGTGATCCATTCCGTCCCTTGTGGGACATCGATCATATACCAAGGTTCATATATAGTCTGGATTGGATTCCAGATCCAAGGTGTGTTCTTCTCTCCTTTGATGATGGAACAATGAAACTTCTCAGCTTGACAAAGGCTGCCTCTGATGCCCCTGTAACAGGAAAACCCTTTGCTGGAACAAAACAACAGGGCCTGCACAATCTTGGTTGTTTGCCTTTTGCTATCTGGAGTGTTCAAGTATCAAGACTAACAGGCATGGTTGCATATTGTGGTGCAGATGGAACTGTTCTGCGCTTCCAACTTACGTCCAATGCTGTGGAGAAAGATGCTACACGAAACCGGGCCCCACATTTTCTGTGCGTGTCACTAACTGAAGAGGACTCTGTTGTGACCATCAATACCCCAGTACCACATAATCCTTTCCCGTTGAAAACATCTCGTAAAGCTGAGCCAAACAAAGTGAAGAGAGAACATGATAAGATGACAAGTACATCACAAGATCAAGTTTTAGCTCTTTGTTACGGTGATGATCCGGGTATTGAATTAGAATCTGGGAAAGAAGCAGCATCTCTTAGAAGCAAAACACTCAAATCTGCGGATGACCAAGCATTAGTATGCATGGATCAAGAGCCATTTAATACCCAAGACGAAGAAATTGGAGAGAAGGGTACATCTCTTAAAGGCATTGTAAAACAGAAATCCAAGTCTAGTAAGAAAAATACAGAGGATGAACAAGAACTGGAAGGCAGAGATGAAGAGCTGATTAATACGCAGAGAGAAAAAACTGGGACCGAGTATGAAGTTTTTCCTTCCAAGCAAGTAGCAATGCACCGAGTGAGATGGAACATGAACAAGGGTAGTGAGAGATGGTTATGCTATGGAGGGGCAGCTGGAATAGTACGTTGTCAAGAGATTGTTTTGTCTGACATTGATATGAAATGGGCAAGGAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AT_hook

Protein Analysis

940

Amino Acids

104.72

Weight (kDa)

6.96

Isoelectric Point (pI)

39.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_THOC3 PF25174 543 - 668 6.6e-06 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 152, 1570
AccB7I CCANNNNNTGG 1 cut(s) 143
AccI GTMKAC 1 cut(s) 640
AccIII TCCGGA 1 cut(s) 1250
AciI CCGC 2 cut(s) 1130, 2462
AclWI GGATC 6 cut(s) 118, 1544, 1865, 1934, 2390, 2496
AcsI RAATTY 2 cut(s) 589, 1853
AcuI CTGAAG 1 cut(s) 2259
AcyI GRCGYC 1 cut(s) 1402
AdeI CACNNNGTG 1 cut(s) 2701
AfaI GTAC 9 cut(s) 597, 810, 1005, 1037, 1218, 2274, 2356, 2536, 2766
AfiI CCNNNNNNNGG 6 cut(s) 143, 227, 1129, 1378, 2024, 2039
AgsI TTSAA 9 cut(s) 740, 890, 1244, 1284, 1514, 1597, 2102, 2296, 2408
AjnI CCWGG 2 cut(s) 106, 1072
AjuI GAANNNNNNNTTGG 4 cut(s) 294, 326, 1369, 1401
Alw26I GTCTC 2 cut(s) 500, 1479
AlwI GGATC 6 cut(s) 118, 1544, 1865, 1934, 2390, 2496
AlwNI CAGNNNCTG 1 cut(s) 2059
Ama87I CYCGRG 1 cut(s) 1047
Aor13HI TCCGGA 1 cut(s) 1250
ApaI GGGCCC 2 cut(s) 1792, 2212
ApeKI GCWGC 6 cut(s) 95, 906, 1119, 2003, 2429, 2753
ApoI RAATTY 2 cut(s) 589, 1853
AseI ATTAAT 1 cut(s) 2631
Asp700I GAANNNNTTC 2 cut(s) 201, 2670
AspLEI GCGC 5 cut(s) 977, 1210, 1757, 1780, 2160
AsuC2I CCSGG 3 cut(s) 1257, 2207, 2400
AsuHPI GGTGA 7 cut(s) 143, 490, 929, 1361, 1616, 1638, 2402
AvaI CYCGRG 1 cut(s) 1047
AvaII GGWCC 4 cut(s) 1253, 1259, 1861, 2655
BaeGI GKGCMC 3 cut(s) 1547, 1792, 2212
BaeI ACNNNNGTAYC 2 cut(s) 2256, 2289
BanI GGYRCC 2 cut(s) 152, 1570
BanII GRGCYC 2 cut(s) 1792, 2212
BauI CACGAG 1 cut(s) 1503
BbsI GAAGAC 7 cut(s) 164, 286, 370, 454, 560, 667, 773
BbvI GCAGC 6 cut(s) 82, 918, 1131, 1990, 2441, 2765
BccI CCATC 8 cut(s) 485, 698, 1676, 1964, 2138, 2267, 2700, 2727
BcgI CGANNNNNNTGC 4 cut(s) 50, 68, 84, 102
BciT130I CCWGG 2 cut(s) 108, 1074
BclI TGATCA 1 cut(s) 931
BcnI CCSGG 3 cut(s) 1257, 2207, 2400
BcoDI GTCTC 2 cut(s) 500, 1479
BfmI CTRYAG 1 cut(s) 207
BfoI RGCGCY 1 cut(s) 1781
BglI GCCNNNNNGGC 1 cut(s) 352
BisI GCNGC 6 cut(s) 96, 907, 1120, 2004, 2430, 2754
BlpI GCTNAGC 1 cut(s) 2313
BlsI GCNGC 6 cut(s) 97, 908, 1121, 2005, 2431, 2755
Bme1390I CCNGG 5 cut(s) 108, 1074, 1257, 2207, 2400
Bme18I GGWCC 4 cut(s) 1253, 1259, 1861, 2655
BmeT110I CYCGRG 1 cut(s) 1047
BmrFI CCNGG 5 cut(s) 108, 1074, 1257, 2207, 2400
BmrI ACTGGG 2 cut(s) 2264, 2661
BmsI GCATC 8 cut(s) 1418, 1444, 1574, 1626, 1664, 2002, 2182, 2441
BmuI ACTGGG 2 cut(s) 2264, 2661
BpiI GAAGAC 7 cut(s) 164, 286, 370, 454, 560, 667, 773
BpmI CTGGAG 3 cut(s) 779, 1557, 2113
Bpu1102I GCTNAGC 1 cut(s) 2313
BpuEI CTTGAG 5 cut(s) 567, 780, 975, 1139, 1710
BpuMI CCSGG 3 cut(s) 1257, 2207, 2400
Bsa29I ATCGAT 1 cut(s) 1896
BsaAI YACGTR 1 cut(s) 1868
BsaBI GATNNNNATC 2 cut(s) 936, 1764
BsaHI GRCGYC 1 cut(s) 1402
BsaI GGTCTC 2 cut(s) 500, 1479
BsaJI CCNNGG 5 cut(s) 106, 1073, 1372, 1907, 1943
BsaWI WCCGGW 1 cut(s) 1250
BsaXI ACNNNNNCTCC 3 cut(s) 33, 987, 1017
Bsc4I CCNNNNNNNGG 6 cut(s) 143, 227, 1129, 1378, 2024, 2039
Bse1I ACTGG 6 cut(s) 148, 762, 1574, 2270, 2610, 2656
Bse3DI GCAATG 3 cut(s) 90, 1340, 2697
Bse8I GATNNNNATC 2 cut(s) 936, 1764
BseAI TCCGGA 1 cut(s) 1250
BseBI CCWGG 2 cut(s) 108, 1074
BseCI ATCGAT 1 cut(s) 1896
BseDI CCNNGG 5 cut(s) 106, 1073, 1372, 1907, 1943
BseGI GGATG 9 cut(s) 100, 496, 904, 1339, 1396, 1617, 1679, 2470, 2599
BseJI GATNNNNATC 2 cut(s) 936, 1764
BseLI CCNNNNNNNGG 6 cut(s) 143, 227, 1129, 1378, 2024, 2039
BseMI GCAATG 3 cut(s) 90, 1340, 2697
BseMII CTCAG 5 cut(s) 333, 537, 1217, 2002, 2304
BseNI ACTGG 6 cut(s) 148, 762, 1574, 2270, 2610, 2656
BseSI GKGCMC 3 cut(s) 1547, 1792, 2212
BseXI GCAGC 6 cut(s) 82, 918, 1131, 1990, 2441, 2765
BseYI CCCAGC 1 cut(s) 1792
BsgI GTGCAG 2 cut(s) 2045, 2160
Bsh1285I CGRYCG 2 cut(s) 64, 644
BshNI GGYRCC 2 cut(s) 152, 1570
BshVI ATCGAT 1 cut(s) 1896
BsiEI CGRYCG 2 cut(s) 64, 644
BsiHKCI CYCGRG 1 cut(s) 1047
BsiSI CCGG 5 cut(s) 1251, 1256, 1671, 2206, 2399
BslFI GGGAC 4 cut(s) 1866, 1874, 1904, 2668
BslI CCNNNNNNNGG 6 cut(s) 143, 227, 1129, 1378, 2024, 2039
BsmAI GTCTC 2 cut(s) 500, 1479
BsmFI GGGAC 4 cut(s) 1866, 1874, 1904, 2668
BsmI GAATGC 2 cut(s) 553, 766
Bso31I GGTCTC 2 cut(s) 500, 1479
BsoBI CYCGRG 1 cut(s) 1047
Bsp120I GGGCCC 2 cut(s) 1788, 2208
Bsp1286I GDGCHC 3 cut(s) 1547, 1792, 2212
Bsp13I TCCGGA 1 cut(s) 1250
Bsp1407I TGTACA 3 cut(s) 595, 808, 1216
Bsp1720I GCTNAGC 1 cut(s) 2313
Bsp19I CCATGG 1 cut(s) 1372
BspACI CCGC 2 cut(s) 1130, 2462
BspCNI CTCAG 5 cut(s) 334, 538, 1216, 2001, 2305
BspDI ATCGAT 1 cut(s) 1896
BspEI TCCGGA 1 cut(s) 1250
BspHI TCATGA 1 cut(s) 49
BspPI GGATC 6 cut(s) 118, 1544, 1865, 1934, 2390, 2496
BspQI GCTCTTC 1 cut(s) 2616
BspT107I GGYRCC 2 cut(s) 152, 1570
BspTNI GGTCTC 2 cut(s) 500, 1479
BsrDI GCAATG 3 cut(s) 90, 1340, 2697
BsrGI TGTACA 3 cut(s) 595, 808, 1216
BsrI ACTGG 6 cut(s) 148, 762, 1574, 2270, 2610, 2656
BssECI CCNNGG 5 cut(s) 106, 1073, 1372, 1907, 1943
BssNI GRCGYC 1 cut(s) 1402
BssSI CACGAG 1 cut(s) 1503
BssT1I CCWWGG 3 cut(s) 1372, 1907, 1943
Bst2BI CACGAG 1 cut(s) 1503
Bst2UI CCWGG 2 cut(s) 108, 1074
Bst4CI ACNGT 6 cut(s) 65, 339, 1630, 1690, 2152, 2390
Bst6I CTCTTC 4 cut(s) 408, 2235, 2324, 2616
BstACI GRCGYC 1 cut(s) 1402
BstAPI GCANNNNNTGC 1 cut(s) 972
BstAUI TGTACA 3 cut(s) 595, 808, 1216
BstBAI YACGTR 1 cut(s) 1868
BstC8I GCNNGC 3 cut(s) 1176, 1433, 2060
BstDEI CTNAG 7 cut(s) 342, 546, 623, 1203, 1988, 2313, 2438
BstDSI CCRYGG 1 cut(s) 1372
BstENI CCTNNNNNAGG 1 cut(s) 2022
BstF5I GGATG 9 cut(s) 100, 496, 904, 1339, 1396, 1617, 1679, 2470, 2599
BstH2I RGCGCY 1 cut(s) 1781
BstHHI GCGC 5 cut(s) 977, 1210, 1757, 1780, 2160
BstMAI GTCTC 2 cut(s) 500, 1479
BstMCI CGRYCG 2 cut(s) 64, 644
BstMWI GCNNNNNNNGC 4 cut(s) 95, 352, 972, 2012
BstNI CCWGG 2 cut(s) 108, 1074
BstNSI RCATGY 1 cut(s) 1178
BstSCI CCNGG 5 cut(s) 106, 1072, 1255, 2205, 2398
BstSFI CTRYAG 1 cut(s) 207
BstSLI GKGCMC 3 cut(s) 1547, 1792, 2212
BstV1I GCAGC 6 cut(s) 82, 918, 1131, 1990, 2441, 2765
BstV2I GAAGAC 7 cut(s) 164, 286, 370, 454, 560, 667, 773
BstX2I RGATCY 2 cut(s) 110, 1939
BstXI CCANNNNNNTGG 1 cut(s) 2182
BstYI RGATCY 2 cut(s) 110, 1939
Bsu15I ATCGAT 1 cut(s) 1896
BsuTUI ATCGAT 1 cut(s) 1896
BtgI CCRYGG 1 cut(s) 1372
BtsCI GGATG 9 cut(s) 100, 496, 904, 1339, 1396, 1617, 1679, 2470, 2599
BtsIMutI CAGTG 3 cut(s) 261, 755, 1545
Cac8I GCNNGC 3 cut(s) 1176, 1433, 2060
CaiI CAGNNNCTG 1 cut(s) 2059
CciI TCATGA 1 cut(s) 49
CfoI GCGC 5 cut(s) 977, 1210, 1757, 1780, 2160
ClaI ATCGAT 1 cut(s) 1896
CpoI CGGWCCG 1 cut(s) 1253
CseI GACGC 2 cut(s) 812, 1391
Csp6I GTAC 9 cut(s) 596, 809, 1004, 1036, 1217, 2273, 2355, 2535, 2765
CspI CGGWCCG 1 cut(s) 1253
CviQI GTAC 9 cut(s) 596, 809, 1004, 1036, 1217, 2273, 2355, 2535, 2765
DdeI CTNAG 7 cut(s) 342, 546, 623, 1203, 1988, 2313, 2438
DraIII CACNNNGTG 1 cut(s) 2701
Eam1104I CTCTTC 4 cut(s) 408, 2235, 2324, 2616
EarI CTCTTC 4 cut(s) 408, 2235, 2324, 2616
Eco130I CCWWGG 3 cut(s) 1372, 1907, 1943
Eco147I AGGCCT 4 cut(s) 439, 847, 1738, 1848
Eco24I GRGCYC 2 cut(s) 1792, 2212
Eco31I GGTCTC 2 cut(s) 500, 1479
Eco47I GGWCC 4 cut(s) 1253, 1259, 1861, 2655
Eco57I CTGAAG 1 cut(s) 2259
Eco88I CYCGRG 1 cut(s) 1047
EcoNI CCTNNNNNAGG 1 cut(s) 2022
EcoO109I RGGNCCY 6 cut(s) 14, 1259, 1789, 1861, 2056, 2209
EcoRII CCWGG 2 cut(s) 106, 1072
EcoT14I CCWWGG 3 cut(s) 1372, 1907, 1943
EcoT22I ATGCAT 1 cut(s) 2486
EcoT38I GRGCYC 2 cut(s) 1792, 2212
ErhI CCWWGG 3 cut(s) 1372, 1907, 1943
FalI AAGNNNNNCTT 2 cut(s) 1212, 1244
FaqI GGGAC 4 cut(s) 1866, 1874, 1904, 2668
FbaI TGATCA 1 cut(s) 931
FblI GTMKAC 1 cut(s) 640
Fnu4HI GCNGC 6 cut(s) 96, 907, 1120, 2004, 2430, 2754
FokI GGATG 9 cut(s) 87, 503, 911, 1346, 1403, 1604, 1686, 2477, 2606
FriOI GRGCYC 2 cut(s) 1792, 2212
Fsp4HI GCNGC 6 cut(s) 96, 907, 1120, 2004, 2430, 2754
GlaI GCGC 5 cut(s) 976, 1209, 1756, 1779, 2159
GluI GCNGC 6 cut(s) 96, 907, 1120, 2004, 2430, 2754
GsaI CCCAGC 1 cut(s) 1796
GsuI CTGGAG 3 cut(s) 779, 1557, 2113
HaeII RGCGCY 1 cut(s) 1781
HapII CCGG 5 cut(s) 1251, 1256, 1671, 2206, 2399
HgaI GACGC 2 cut(s) 812, 1391
HhaI GCGC 5 cut(s) 977, 1210, 1757, 1780, 2160
Hin1I GRCGYC 1 cut(s) 1402
Hin6I GCGC 5 cut(s) 975, 1208, 1755, 1778, 2158
HinP1I GCGC 5 cut(s) 975, 1208, 1755, 1778, 2158
HincII GTYRAC 3 cut(s) 481, 641, 694
HindII GTYRAC 3 cut(s) 481, 641, 694
HpaII CCGG 5 cut(s) 1251, 1256, 1671, 2206, 2399
HphI GGTGA 7 cut(s) 143, 490, 929, 1361, 1616, 1638, 2402
Hpy166II GTNNAC 4 cut(s) 481, 641, 694, 802
Hpy188I TCNGA 7 cut(s) 162, 343, 547, 1168, 1810, 2011, 2791
Hpy8I GTNNAC 4 cut(s) 481, 641, 694, 802
HpyAV CCTTC 4 cut(s) 191, 2524, 2603, 2685
HpyCH4III ACNGT 6 cut(s) 65, 339, 1630, 1690, 2152, 2390
HpyCH4IV ACGT 4 cut(s) 1034, 1867, 2171, 2767
HpyF10VI GCNNNNNNNGC 4 cut(s) 95, 352, 972, 2012
HpyF3I CTNAG 7 cut(s) 342, 546, 623, 1203, 1988, 2313, 2438
HpySE526I ACGT 4 cut(s) 1034, 1867, 2171, 2767
Hsp92I GRCGYC 1 cut(s) 1402
HspAI GCGC 5 cut(s) 975, 1208, 1755, 1778, 2158
Kpn2I TCCGGA 1 cut(s) 1250
Ksp22I TGATCA 1 cut(s) 931
LguI GCTCTTC 1 cut(s) 2616
LmnI GCTCC 3 cut(s) 245, 982, 1116
Lsp1109I GCAGC 6 cut(s) 82, 918, 1131, 1990, 2441, 2765
LweI GCATC 8 cut(s) 1418, 1444, 1574, 1626, 1664, 2002, 2182, 2441
MaeII ACGT 4 cut(s) 1034, 1867, 2171, 2767
MaeIII GTNAC 7 cut(s) 56, 821, 1604, 2020, 2229, 2254, 2384
MfeI CAATTG 2 cut(s) 502, 1509
MflI RGATCY 2 cut(s) 110, 1939
MhlI GDGCHC 3 cut(s) 1547, 1792, 2212
MlyI GAGTC 5 cut(s) 646, 826, 1039, 1152, 2240
MmeI TCCRAC 2 cut(s) 939, 2188
Mph1103I ATGCAT 1 cut(s) 2486
MroI TCCGGA 1 cut(s) 1250
MroXI GAANNNNTTC 2 cut(s) 201, 2670
MseI TTAA 6 cut(s) 1230, 1410, 1664, 2502, 2544, 2631
MslI CAYNNNNRTG 2 cut(s) 2479, 2798
MspA1I CMGCKG 1 cut(s) 2756
MspI CCGG 5 cut(s) 1251, 1256, 1671, 2206, 2399
MspR9I CCNGG 5 cut(s) 108, 1074, 1257, 2207, 2400
MunI CAATTG 2 cut(s) 502, 1509
Mva1269I GAATGC 2 cut(s) 553, 766
MvaI CCWGG 2 cut(s) 108, 1074
MwoI GCNNNNNNNGC 4 cut(s) 95, 352, 972, 2012
NciI CCSGG 3 cut(s) 1257, 2207, 2400
NcoI CCATGG 1 cut(s) 1372
NmeAIII GCCGAG 1 cut(s) 381
NmuCI GTSAC 4 cut(s) 56, 1604, 2229, 2254
NsiI ATGCAT 1 cut(s) 2486
NspI RCATGY 1 cut(s) 1178
PaeI GCATGC 1 cut(s) 1178
PaeR7I CTCGAG 1 cut(s) 1047
PagI TCATGA 1 cut(s) 49
PceI AGGCCT 4 cut(s) 439, 847, 1738, 1848
PciSI GCTCTTC 1 cut(s) 2616
PctI GAATGC 2 cut(s) 553, 766
PdmI GAANNNNTTC 2 cut(s) 201, 2670
PflFI GACNNNGTC 1 cut(s) 1257
PflMI CCANNNNNTGG 1 cut(s) 143
PkrI GCNGC 6 cut(s) 97, 908, 1121, 2005, 2431, 2755
PleI GAGTC 5 cut(s) 645, 826, 1039, 1151, 2240
PpsI GAGTC 5 cut(s) 645, 826, 1039, 1151, 2240
Ppu21I YACGTR 1 cut(s) 1868
PpuMI RGGWCCY 2 cut(s) 1259, 1861
PshBI ATTAAT 1 cut(s) 2631
Psp5II RGGWCCY 2 cut(s) 1259, 1861
Psp6I CCWGG 2 cut(s) 106, 1072
PspFI CCCAGC 1 cut(s) 1792
PspGI CCWGG 2 cut(s) 106, 1072
PspOMI GGGCCC 2 cut(s) 1788, 2208
PspPPI RGGWCCY 2 cut(s) 1259, 1861
PspXI VCTCGAGB 1 cut(s) 1047
PstNI CAGNNNCTG 1 cut(s) 2059
PsuI RGATCY 2 cut(s) 110, 1939
PsyI GACNNNGTC 1 cut(s) 1257
PvuII CAGCTG 1 cut(s) 2756
RsaI GTAC 9 cut(s) 597, 810, 1005, 1037, 1218, 2274, 2356, 2536, 2766
RsaNI GTAC 9 cut(s) 596, 809, 1004, 1036, 1217, 2273, 2355, 2535, 2765
RseI CAYNNNNRTG 2 cut(s) 2479, 2798
Rsr2I CGGWCCG 1 cut(s) 1253
RsrII CGGWCCG 1 cut(s) 1253
SalI GTCGAC 1 cut(s) 639
SapI GCTCTTC 1 cut(s) 2616
SaqAI TTAA 6 cut(s) 1230, 1410, 1664, 2502, 2544, 2631
SatI GCNGC 6 cut(s) 96, 907, 1120, 2004, 2430, 2754
SchI GAGTC 5 cut(s) 646, 826, 1039, 1152, 2240
ScrFI CCNGG 5 cut(s) 108, 1074, 1257, 2207, 2400
SduI GDGCHC 3 cut(s) 1547, 1792, 2212
SfaNI GCATC 8 cut(s) 1418, 1444, 1574, 1626, 1664, 2002, 2182, 2441
SfcI CTRYAG 1 cut(s) 207
Sfr274I CTCGAG 1 cut(s) 1047
SinI GGWCC 4 cut(s) 1253, 1259, 1861, 2655
SlaI CTCGAG 1 cut(s) 1047
SmiMI CAYNNNNRTG 2 cut(s) 2479, 2798
SmlI CTYRAG 6 cut(s) 582, 795, 990, 1047, 1154, 1725
SmoI CTYRAG 6 cut(s) 582, 795, 990, 1047, 1154, 1725
SphI GCATGC 1 cut(s) 1178
SseBI AGGCCT 4 cut(s) 439, 847, 1738, 1848
SsiI CCGC 2 cut(s) 1130, 2462
SspI AATATT 1 cut(s) 1094
StuI AGGCCT 4 cut(s) 439, 847, 1738, 1848
StyD4I CCNGG 5 cut(s) 106, 1072, 1255, 2205, 2398
StyI CCWWGG 3 cut(s) 1372, 1907, 1943
TaaI ACNGT 6 cut(s) 65, 339, 1630, 1690, 2152, 2390
TaiI ACGT 4 cut(s) 1037, 1870, 2174, 2770
TaqI TCGA 5 cut(s) 640, 835, 1048, 1438, 1896
TaqII GACCGA 2 cut(s) 658, 2672
TatI WGTACW 4 cut(s) 595, 808, 1216, 2354
Tru1I TTAA 6 cut(s) 1230, 1410, 1664, 2502, 2544, 2631
Tru9I TTAA 6 cut(s) 1230, 1410, 1664, 2502, 2544, 2631
TscAI CASTG 3 cut(s) 268, 762, 1552
TseFI GTSAC 4 cut(s) 56, 1604, 2229, 2254
TseI GCWGC 6 cut(s) 95, 906, 1119, 2003, 2429, 2753
Tsp45I GTSAC 4 cut(s) 56, 1604, 2229, 2254
TspGWI ACGGA 2 cut(s) 788, 1868
TspRI CASTG 3 cut(s) 268, 762, 1552
Tth111I GACNNNGTC 1 cut(s) 1257
Van91I CCANNNNNTGG 1 cut(s) 143
VpaK11BI GGWCC 4 cut(s) 1253, 1259, 1861, 2655
VspI ATTAAT 1 cut(s) 2631
XagI CCTNNNNNAGG 1 cut(s) 2022
XapI RAATTY 2 cut(s) 589, 1853
XceI RCATGY 1 cut(s) 1178
XhoI CTCGAG 1 cut(s) 1047
XmiI GTMKAC 1 cut(s) 640
XmnI GAANNNNTTC 2 cut(s) 201, 2670
Zsp2I ATGCAT 1 cut(s) 2486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.