pycom12g06310

Belongs to the peptidase M16 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
6436493 .. 6445036
8544 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g06310.6

Sequence Viewer

Length: 1974 bp
ATGGCGATCGGGAAGGAAGAGGTGGAGGAAATAGTGAAACCCCGTACGGACAAGAGGGAGTACAGGAGGATTGTCCTACCGAACTCCCTCGAAATCCTTCTCATCAGCGATCCTGATACTGACAAGTGTGCTGCTTCCATGGATGTCAATGTTGGTGCTTTTAGCGACCCTGATGGCCTGGAGGGCCTTGCCCATTTCCTTGAGCATATGCTGTTTTATGCTAGTGAAAAGTACCCTTTGGAGGATAGTTACTCGAAGTACATCACCGAGCATGGAGGGCGAACAAATGCTTTTACAGCCTCTGAGCACACCAACTATTATTTTGACATCAATTCCGATGGTTTTGAAGAGGGTTTGGACAGATTTGCTCAGTTCTTTATTAAACCATTGATGTCAGCTGAAGCTACAATGAGGGAGATCAAAGCTGTTGATTCTGAGAATCAGAAAAACCTGTTGTCTGATGGATGGAGAATGAACCAGCTCCAGAAACATCTAAGTGTGGCTGACCATCCGTACCATAAATTTAGTACAGGGAATTGGGAAACTTTGGAGGTCCGTCCAAAAGCAAAAGGATTGGATACCAGAGATGAGCTTATTAAGTTCTATGAACAATATTATTCTGCTAATGTCATGCATCTTGTCATTTATGGAAAAGAAAACCTTGATAAAATTCAAGCCACTGTAGAGGACAAGTTTAAGGATATTAGAAACATTGACCGCAACTGCCTTCATTTTGGTGGTGAGCCTTGCACATCAGAACATTTACAGATTCTTGTCAAAACTGTTCCAATCAAAGAGGGTCATAAGCTGAGACTTGTGTGGCCAATAGCTCCAGAAATTCATCATTACAAGGAAGGGCCATGTAGGTATCTTAGTCATCTCATTGGCCACGAAGCAGAGGGGTCTTTGTTTGCCGTCTTGAAAGCTTTGGGATGGGCAACAGGTTTGTCTGCTGGGGAATCGGATTCAACGTTGGTCTTTTCTTTCTTTAGAGTAGATATGGATCTCACGGACGCGGGTCATGAGCACATGCAAGATATAGTAGGTTTGCTTTTCAAATACATTTCCCTCTTACAGCAGTTGGGCGTTTGCGAGTGGATTTTTGATGAGCTTTCTGCTGTTTGCGAGACGAAGTTTCATTATCAGGACAAAATGCAGCCTATTAATTATGTCGTCAGCATTTCGACAAATATGCAGAGATATCCCCCAAGAGATTGGCTAGTAAGATCATCCTTGCCTTCTAACTTCAGTCCAGACACTATCCAAATGGTGCTTAACAAGCTTTGTCCAGACAATGTCAGAATTTTCTGGGAATCAAAAAAATTTGAAGGTCATACTAACATGACTGAGCCATGGTATGGAACTGCTTATTCCGTTGAGAAAATTAGTGGCTCAATGATTCAGGAATGGATAGTATCTTCCCCAAATGAGAATCTGCACTTACCAGCCCATAACGTGTTCATCCCCACTGACTTGTCGCTTAAGAATAATCATGAGAAGGCCAATTGTCCAGTTCTGTTAAGAAAGTCGCCGTGTTCAACACTTTGGTACAAGCCCGATACAATGTTCTTTACTCCTAAGGCTTACGTTAAGATTGATTTCACTTGTCCCCACGCAAGTGAATCCCCTGAAACAGAAGTCCTAACTAATATGTTTACTCAGCTGTTGATGGATTACTTGAATGAATATGCCTACTATGCTCAGGTTGCTGAACTGTTTTACGGAATAACCCACACAGATAGTGGGTTTCAGGTGACTCTGGTTGGCTATAACCACAAATTAAGAATTTTACTGGAAACTGTAGTTGAGAAGATTGCAAGCTTTAAAGTGAAAGCTGATAGGTTCGCAGTCATCAAGGAAATGCTCATAAAGGATTACCAAAACTTGAAATTTCAACAGCCTTATGAGCAGGCTATGAACTACTCCGCATTAATTCTACAGGATCGATACTTGTCCATGGACGGAAGAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling

Protein Analysis

658

Amino Acids

75.71

Weight (kDa)

5.56

Isoelectric Point (pI)

31.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1358
AccII CGCG 1 cut(s) 1016
AciI CCGC 3 cut(s) 718, 1016, 1926
AclI AACGTT 1 cut(s) 971
AclWI GGATC 3 cut(s) 104, 1011, 1950
AcoI YGGCCR 2 cut(s) 821, 886
AcsI RAATTY 7 cut(s) 521, 669, 837, 1302, 1322, 1785, 1889
AcuI CTGAAG 2 cut(s) 420, 1231
AfaI GTAC 7 cut(s) 46, 62, 233, 260, 515, 529, 1550
AfiI CCNNNNNNNGG 2 cut(s) 241, 1358
AflII CTTAAG 1 cut(s) 1481
AflIII ACRYGT 1 cut(s) 1455
AjnI CCWGG 1 cut(s) 177
AleI CACNNNNGTG 1 cut(s) 1617
Alw21I GWGCWC 2 cut(s) 309, 1029
Alw26I GTCTC 2 cut(s) 805, 1121
AlwI GGATC 3 cut(s) 104, 1011, 1950
AlwNI CAGNNNCTG 1 cut(s) 302
AoxI GGCC 6 cut(s) 175, 184, 821, 857, 886, 1500
ApeKI GCWGC 2 cut(s) 131, 1156
ApoI RAATTY 7 cut(s) 521, 669, 837, 1302, 1322, 1785, 1889
AseI ATTAAT 2 cut(s) 1164, 1931
Asp700I GAANNNNTTC 1 cut(s) 96
AspS9I GGNCC 3 cut(s) 184, 553, 857
AsuHPI GGTGA 3 cut(s) 256, 752, 1765
AvaII GGWCC 1 cut(s) 553
AxyI CCTNAGG 1 cut(s) 1578
BalI TGGCCA 2 cut(s) 823, 888
Bbv12I GWGCWC 2 cut(s) 309, 1029
BbvI GCAGC 2 cut(s) 118, 1168
BccI CCATC 7 cut(s) 167, 332, 455, 459, 516, 927, 1663
BceAI ACGGC 2 cut(s) 899, 1516
BcgI CGANNNNNNTGC 2 cut(s) 1174, 1208
BciT130I CCWGG 1 cut(s) 179
BciVI GTATCC 1 cut(s) 571
BcoDI GTCTC 2 cut(s) 805, 1121
BfaI CTAG 2 cut(s) 222, 1220
BfmI CTRYAG 3 cut(s) 681, 1800, 1937
BfrI CTTAAG 1 cut(s) 1481
BfuI GTATCC 1 cut(s) 571
BglI GCCNNNNNGGC 1 cut(s) 183
BisI GCNGC 2 cut(s) 132, 1157
BlsI GCNGC 2 cut(s) 133, 1158
Bme1390I CCNGG 1 cut(s) 179
Bme18I GGWCC 1 cut(s) 553
BmgT120I GGNCC 3 cut(s) 184, 553, 857
BmrFI CCNGG 1 cut(s) 179
BmsI GCATC 1 cut(s) 643
BoxI GACNNNNGTC 1 cut(s) 1017
BpmI CTGGAG 3 cut(s) 200, 467, 816
Bpu10I CCTNAGC 1 cut(s) 1701
BpuEI CTTGAG 1 cut(s) 221
Bsa29I ATCGAT 1 cut(s) 1945
BsaBI GATNNNNATC 1 cut(s) 1002
BsaJI CCNNGG 3 cut(s) 138, 1352, 1956
Bsc4I CCNNNNNNNGG 2 cut(s) 241, 1358
Bse1I ACTGG 2 cut(s) 1511, 1797
Bse21I CCTNAGG 1 cut(s) 1578
Bse8I GATNNNNATC 1 cut(s) 1002
BseBI CCWGG 1 cut(s) 179
BseCI ATCGAT 1 cut(s) 1945
BseDI CCNNGG 3 cut(s) 138, 1352, 1956
BseGI GGATG 6 cut(s) 148, 470, 508, 938, 1229, 1461
BseJI GATNNNNATC 1 cut(s) 1002
BseLI CCNNNNNNNGG 2 cut(s) 241, 1358
BseMII CTCAG 7 cut(s) 294, 383, 426, 800, 1338, 1673, 1715
BseNI ACTGG 2 cut(s) 1511, 1797
BseXI GCAGC 2 cut(s) 118, 1168
BseYI CCCAGC 1 cut(s) 953
BsgI GTGCAG 1 cut(s) 1421
Bsh1236I CGCG 1 cut(s) 1016
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 6 cut(s) 177, 186, 823, 859, 888, 1502
BshVI ATCGAT 1 cut(s) 1945
BsiEI CGRYCG 1 cut(s) 9
BsiHKAI GWGCWC 2 cut(s) 309, 1029
BsiWI CGTACG 1 cut(s) 44
BslFI GGGAC 1 cut(s) 1593
BslI CCNNNNNNNGG 2 cut(s) 241, 1358
BsmAI GTCTC 2 cut(s) 805, 1121
BsmBI CGTCTC 1 cut(s) 1121
BsmFI GGGAC 1 cut(s) 1593
BsnI GGCC 6 cut(s) 177, 186, 823, 859, 888, 1502
Bsp1286I GDGCHC 2 cut(s) 309, 1029
Bsp143I GATC 6 cut(s) 6, 109, 417, 1003, 1226, 1942
Bsp19I CCATGG 3 cut(s) 138, 1352, 1956
BspACI CCGC 3 cut(s) 718, 1016, 1926
BspANI GGCC 6 cut(s) 177, 186, 823, 859, 888, 1502
BspCNI CTCAG 7 cut(s) 295, 382, 427, 801, 1339, 1672, 1714
BspDI ATCGAT 1 cut(s) 1945
BspFNI CGCG 1 cut(s) 1016
BspHI TCATGA 2 cut(s) 1021, 1492
BspPI GGATC 3 cut(s) 104, 1011, 1950
BspTI CTTAAG 1 cut(s) 1481
BsrI ACTGG 2 cut(s) 1511, 1797
BssECI CCNNGG 3 cut(s) 138, 1352, 1956
BssMI GATC 6 cut(s) 6, 109, 417, 1003, 1226, 1942
BssT1I CCWWGG 3 cut(s) 138, 1352, 1956
Bst2UI CCWGG 1 cut(s) 179
Bst4CI ACNGT 4 cut(s) 682, 784, 1716, 1801
Bst6I CTCTTC 2 cut(s) 12, 342
BstAFI CTTAAG 1 cut(s) 1481
BstC8I GCNNGC 2 cut(s) 1819, 1911
BstDSI CCRYGG 3 cut(s) 138, 1352, 1956
BstF5I GGATG 6 cut(s) 148, 470, 508, 938, 1229, 1461
BstFNI CGCG 1 cut(s) 1016
BstKTI GATC 6 cut(s) 9, 112, 420, 1006, 1229, 1945
BstMAI GTCTC 2 cut(s) 805, 1121
BstMBI GATC 6 cut(s) 6, 109, 417, 1003, 1226, 1942
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 7 cut(s) 183, 277, 296, 1279, 1697, 1706, 1906
BstNI CCWGG 1 cut(s) 179
BstNSI RCATGY 1 cut(s) 1033
BstPAI GACNNNNGTC 1 cut(s) 1017
BstSCI CCNGG 1 cut(s) 177
BstSFI CTRYAG 3 cut(s) 681, 1800, 1937
BstUI CGCG 1 cut(s) 1016
BstV1I GCAGC 2 cut(s) 118, 1168
BstX2I RGATCY 1 cut(s) 1003
BstXI CCANNNNNNTGG 1 cut(s) 1215
BstYI RGATCY 1 cut(s) 1003
Bsu15I ATCGAT 1 cut(s) 1945
Bsu36I CCTNAGG 1 cut(s) 1578
BsuI GTATCC 1 cut(s) 571
BsuRI GGCC 6 cut(s) 177, 186, 823, 859, 888, 1502
BsuTUI ATCGAT 1 cut(s) 1945
BtgI CCRYGG 3 cut(s) 138, 1352, 1956
BtsCI GGATG 6 cut(s) 148, 470, 508, 938, 1229, 1461
BtsIMutI CAGTG 2 cut(s) 678, 1467
Cac8I GCNNGC 2 cut(s) 1819, 1911
CaiI CAGNNNCTG 1 cut(s) 302
CciI TCATGA 2 cut(s) 1021, 1492
Cfr13I GGNCC 3 cut(s) 184, 553, 857
ClaI ATCGAT 1 cut(s) 1945
CseI GACGC 1 cut(s) 1022
Csp6I GTAC 7 cut(s) 45, 61, 232, 259, 514, 528, 1549
CviQI GTAC 7 cut(s) 45, 61, 232, 259, 514, 528, 1549
DpnI GATC 6 cut(s) 8, 111, 419, 1005, 1228, 1944
DpnII GATC 6 cut(s) 6, 109, 417, 1003, 1226, 1942
DraI TTTAAA 1 cut(s) 1825
EaeI YGGCCR 2 cut(s) 821, 886
Eam1104I CTCTTC 2 cut(s) 12, 342
EarI CTCTTC 2 cut(s) 12, 342
Eco130I CCWWGG 3 cut(s) 138, 1352, 1956
Eco32I GATATC 1 cut(s) 1202
Eco47I GGWCC 1 cut(s) 553
Eco57I CTGAAG 2 cut(s) 420, 1231
Eco81I CCTNAGG 1 cut(s) 1578
EcoO109I RGGNCCY 1 cut(s) 184
EcoRII CCWGG 1 cut(s) 177
EcoRV GATATC 1 cut(s) 1202
EcoT14I CCWWGG 3 cut(s) 138, 1352, 1956
EcoT22I ATGCAT 1 cut(s) 636
ErhI CCWWGG 3 cut(s) 138, 1352, 1956
Esp3I CGTCTC 1 cut(s) 1121
FalI AAGNNNNNCTT 2 cut(s) 645, 677
FaqI GGGAC 1 cut(s) 1593
FauI CCCGC 1 cut(s) 1009
FauNDI CATATG 1 cut(s) 207
Fnu4HI GCNGC 2 cut(s) 132, 1157
FokI GGATG 6 cut(s) 155, 477, 495, 945, 1216, 1448
Fsp4HI GCNGC 2 cut(s) 132, 1157
FspBI CTAG 2 cut(s) 222, 1220
GluI GCNGC 2 cut(s) 132, 1157
GsaI CCCAGC 1 cut(s) 957
GsuI CTGGAG 3 cut(s) 200, 467, 816
HaeIII GGCC 6 cut(s) 177, 186, 823, 859, 888, 1502
HgaI GACGC 1 cut(s) 1022
HindIII AAGCTT 3 cut(s) 924, 1280, 1819
HphI GGTGA 3 cut(s) 256, 752, 1765
Hpy166II GTNNAC 1 cut(s) 1656
Hpy188I TCNGA 8 cut(s) 304, 337, 436, 444, 460, 757, 964, 1301
Hpy8I GTNNAC 1 cut(s) 1656
HpyAV CCTTC 7 cut(s) 7, 107, 737, 848, 1248, 1322, 1492
HpyCH4III ACNGT 4 cut(s) 682, 784, 1716, 1801
HpyCH4IV ACGT 3 cut(s) 971, 1455, 1587
HpyCH4V TGCA 7 cut(s) 634, 750, 1033, 1156, 1195, 1438, 1817
HpyF10VI GCNNNNNNNGC 7 cut(s) 183, 277, 296, 1279, 1697, 1706, 1906
HpySE526I ACGT 3 cut(s) 971, 1455, 1587
Kzo9I GATC 6 cut(s) 6, 109, 417, 1003, 1226, 1942
LmnI GCTCC 2 cut(s) 486, 835
Lsp1109I GCAGC 2 cut(s) 118, 1168
LweI GCATC 1 cut(s) 643
MaeI CTAG 2 cut(s) 222, 1220
MaeII ACGT 3 cut(s) 971, 1455, 1587
MaeIII GTNAC 2 cut(s) 248, 1753
MalI GATC 6 cut(s) 8, 111, 419, 1005, 1228, 1944
MboI GATC 6 cut(s) 6, 109, 417, 1003, 1226, 1942
MboII GAAGA 4 cut(s) 29, 359, 1410, 1822
MfeI CAATTG 1 cut(s) 1504
MflI RGATCY 1 cut(s) 1003
MhlI GDGCHC 2 cut(s) 309, 1029
MlsI TGGCCA 2 cut(s) 823, 888
MluNI TGGCCA 2 cut(s) 823, 888
MlyI GAGTC 1 cut(s) 1750
Mox20I TGGCCA 2 cut(s) 823, 888
Mph1103I ATGCAT 1 cut(s) 636
MroXI GAANNNNTTC 1 cut(s) 96
MscI TGGCCA 2 cut(s) 823, 888
MslI CAYNNNNRTG 3 cut(s) 495, 735, 1617
Msp20I TGGCCA 2 cut(s) 823, 888
MspA1I CMGCKG 2 cut(s) 398, 1663
MspCI CTTAAG 1 cut(s) 1481
MspR9I CCNGG 1 cut(s) 179
MunI CAATTG 1 cut(s) 1504
MvaI CCWGG 1 cut(s) 179
MvnI CGCG 1 cut(s) 1016
MwoI GCNNNNNNNGC 7 cut(s) 183, 277, 296, 1279, 1697, 1706, 1906
NcoI CCATGG 3 cut(s) 138, 1352, 1956
NdeI CATATG 1 cut(s) 207
NdeII GATC 6 cut(s) 6, 109, 417, 1003, 1226, 1942
NmuCI GTSAC 1 cut(s) 1753
NsiI ATGCAT 1 cut(s) 636
NspI RCATGY 1 cut(s) 1033
OliI CACNNNNGTG 1 cut(s) 1617
PagI TCATGA 2 cut(s) 1021, 1492
PcsI WCGNNNNNNNCGW 1 cut(s) 968
PdmI GAANNNNTTC 1 cut(s) 96
PfeI GAWTC 9 cut(s) 431, 439, 769, 959, 965, 1313, 1399, 1432, 1622
Pfl23II CGTACG 1 cut(s) 44
PflFI GACNNNGTC 1 cut(s) 1295
PflMI CCANNNNNTGG 1 cut(s) 1358
PkrI GCNGC 2 cut(s) 133, 1158
Ple19I CGATCG 1 cut(s) 9
PleI GAGTC 1 cut(s) 1750
PpsI GAGTC 1 cut(s) 1750
PshAI GACNNNNGTC 1 cut(s) 1017
PshBI ATTAAT 2 cut(s) 1164, 1931
Psp1406I AACGTT 1 cut(s) 971
Psp6I CCWGG 1 cut(s) 177
PspFI CCCAGC 1 cut(s) 953
PspGI CCWGG 1 cut(s) 177
PspLI CGTACG 1 cut(s) 44
PspPI GGNCC 3 cut(s) 184, 553, 857
PstNI CAGNNNCTG 1 cut(s) 302
PsuI RGATCY 1 cut(s) 1003
PsyI GACNNNGTC 1 cut(s) 1295
PvuI CGATCG 1 cut(s) 9
PvuII CAGCTG 2 cut(s) 398, 1663
RsaI GTAC 7 cut(s) 46, 62, 233, 260, 515, 529, 1550
RsaNI GTAC 7 cut(s) 45, 61, 232, 259, 514, 528, 1549
RseI CAYNNNNRTG 3 cut(s) 495, 735, 1617
SatI GCNGC 2 cut(s) 132, 1157
Sau3AI GATC 6 cut(s) 6, 109, 417, 1003, 1226, 1942
Sau96I GGNCC 3 cut(s) 184, 553, 857
SchI GAGTC 1 cut(s) 1750
ScrFI CCNGG 1 cut(s) 179
SduI GDGCHC 2 cut(s) 309, 1029
SfaNI GCATC 1 cut(s) 643
SfcI CTRYAG 3 cut(s) 681, 1800, 1937
SfiI GGCCNNNNNGGCC 1 cut(s) 183
SinI GGWCC 1 cut(s) 553
SmiMI CAYNNNNRTG 3 cut(s) 495, 735, 1617
SmlI CTYRAG 2 cut(s) 200, 1481
SmoI CTYRAG 2 cut(s) 200, 1481
SsiI CCGC 3 cut(s) 718, 1016, 1926
SspI AATATT 1 cut(s) 614
SspMI CTAG 2 cut(s) 222, 1220
StyD4I CCNGG 1 cut(s) 177
StyI CCWWGG 3 cut(s) 138, 1352, 1956
TaaI ACNGT 4 cut(s) 682, 784, 1716, 1801
TaiI ACGT 3 cut(s) 974, 1458, 1590
TaqI TCGA 4 cut(s) 90, 254, 1184, 1945
TatI WGTACW 3 cut(s) 60, 258, 527
TfiI GAWTC 9 cut(s) 431, 439, 769, 959, 965, 1313, 1399, 1432, 1622
TscAI CASTG 2 cut(s) 685, 1474
TseFI GTSAC 1 cut(s) 1753
TseI GCWGC 2 cut(s) 131, 1156
Tsp45I GTSAC 1 cut(s) 1753
TspDTI ATGAA 8 cut(s) 488, 621, 719, 830, 1127, 1450, 1698, 1931
TspGWI ACGGA 6 cut(s) 62, 501, 545, 1025, 1363, 1737
TspRI CASTG 2 cut(s) 685, 1474
Tth111I GACNNNGTC 1 cut(s) 1295
Van91I CCANNNNNTGG 1 cut(s) 1358
Vha464I CTTAAG 1 cut(s) 1481
VpaK11BI GGWCC 1 cut(s) 553
VspI ATTAAT 2 cut(s) 1164, 1931
XapI RAATTY 7 cut(s) 521, 669, 837, 1302, 1322, 1785, 1889
XceI RCATGY 1 cut(s) 1033
XcmI CCANNNNNNNNNTGG 1 cut(s) 1739
XmnI GAANNNNTTC 1 cut(s) 96
XspI CTAG 2 cut(s) 222, 1220
Zsp2I ATGCAT 1 cut(s) 636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.