Rmu_sc0001738.1_g000037

Belongs to the peptidase M16 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001738.1
Physical Location & Seq
Forward (+)
164657 .. 169630
4974 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001738.1_g000037.1.cds

Sequence Viewer

Length: 1641 bp
atggtgctgaacaagctttctccaaacaatgtcagaatcttctgggagtccaagaaatttgaaggtgatgcaaacatgttcgagccctggtatgaaactgcttactgcatggagaaaattacgggctccagaattcaggaatggatagcatcttccccaaatgagaatttacacctaccagcacgtaatgttttcatcccaacggacttgtctcttaagaatgagaatgagaaggtcaaatgcccagttctgttaagaaagtcaccatatacaacactatggtacaagcctgatacaatgttttttactcctaaagcatatgtcaagattgatttcaattgcccccatgcaagtggctcccctgaagcagaagtcctgactaatatttttactcacttgttaatggattacttgaatgactatgcttattatgctcaggttgctgaactgtactatggaataaaccacacagaaagtggttttcaggtgactcttgttggttataatcacaaattgaggattttactggaaacggtagttgagaagattgcaagctttaaagtgaaagctgacaggttctctgtgatcaaggaaatggtcacaaaggagtaccaaaactacaaatttcaacagccttatgagcaggctatgtactattgctcattaattctacaggaccagacttggccattgatggaacaactagaagttcttcctcatcttgaagttgaagatcttgctaagtttgttccaatgatgctctcacgggccttcttagagtgttacacagcaggaaatcttgaaagtactgaagctgagtcaatgatcctgcacgtagaagatgttttttttaagggttcaaaccccatttgccaacctttattcccatcccaacatttgacaaatagagtcgtgaagcttgaaaagggaaaaaactttatctatcctgtggaaggccttaatccaagagatgagaattcttccctcgtccactatatccaggttcatcgagatgattttatgctgaatgtgaaacttcagctgcttgttcttattgcaaagcaaccagccttccaccagcttagatcagttgagcaacttggttacataactgctcttttacagaggaatgattgtggtatccgcggactgcagtttattatacaatccacagtgaagggtccaggacatattgatttgagagtggaggaatttctcaaaacgtttgagagtaagctttatgagatgaaaaatgacgaattcaagagcaatgtaaatactttgatcgatatgaagcttgagaagcacaagaacttgagggaagaagctggattttattggagggagatttctgatgggaccctcaagtttgatcgtaaagaagcagagattgcagcactgaggcagcttacacaacaagagttgattgagttttataatgagcatataaaagttggggcacctcgtaagaggacattgagtgtacgagtatatgggaatcctcattcatctgagtatgcatcagataaaagctccccagtgcaaccttgcactgtcaaaatcgatgatatattcactttcagaaggtcacagcctctttatggttcattcaagggaaactttggtcatgtgaagttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling

Protein Analysis

546

Amino Acids

63.53

Weight (kDa)

6.49

Isoelectric Point (pI)

40.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 504, 1437
AccB1I GGYRCC 1 cut(s) 1459
AccII CGCG 1 cut(s) 1146
AciI CCGC 2 cut(s) 1144, 1146
AclI AACGTT 1 cut(s) 1223
AclWI GGATC 1 cut(s) 820
AcoI YGGCCR 1 cut(s) 686
AcsI RAATTY 7 cut(s) 56, 132, 166, 623, 976, 1211, 1259
AcuI CTGAAG 3 cut(s) 384, 831, 1022
AfaI GTAC 6 cut(s) 284, 452, 611, 653, 808, 1485
AfiI CCNNNNNNNGG 2 cut(s) 953, 1601
AflII CTTAAG 1 cut(s) 215
AflIII ACRYGT 1 cut(s) 75
AjnI CCWGG 3 cut(s) 86, 999, 1183
Alw26I GTCTC 1 cut(s) 216
AlwI GGATC 1 cut(s) 820
AoxI GGCC 3 cut(s) 686, 768, 955
ApeKI GCWGC 3 cut(s) 1042, 1394, 1405
ApoI RAATTY 7 cut(s) 56, 132, 166, 623, 976, 1211, 1259
AseI ATTAAT 1 cut(s) 665
Asp700I GAANNNNTTC 1 cut(s) 711
AspS9I GGNCC 4 cut(s) 676, 768, 1181, 1359
AsuHPI GGTGA 3 cut(s) 77, 255, 499
AvaII GGWCC 3 cut(s) 676, 1181, 1359
BaeGI GKGCMC 1 cut(s) 1462
BalI TGGCCA 1 cut(s) 688
BanI GGYRCC 1 cut(s) 1459
BanII GRGCYC 2 cut(s) 87, 128
BbvI GCAGC 3 cut(s) 1029, 1406, 1417
BccI CCATC 3 cut(s) 688, 895, 1349
BciT130I CCWGG 3 cut(s) 88, 1001, 1185
BciVI GTATCC 1 cut(s) 1151
BclI TGATCA 1 cut(s) 585
BcoDI GTCTC 1 cut(s) 216
BfaI CTAG 1 cut(s) 704
BfmI CTRYAG 2 cut(s) 671, 1151
BfrI CTTAAG 1 cut(s) 215
BfuI GTATCC 1 cut(s) 1151
BglII AGATCT 1 cut(s) 733
BisI GCNGC 3 cut(s) 1043, 1395, 1406
BlsI GCNGC 3 cut(s) 1044, 1396, 1407
BmcAI AGTACT 1 cut(s) 808
Bme1390I CCNGG 3 cut(s) 88, 1001, 1185
Bme18I GGWCC 3 cut(s) 676, 1181, 1359
BmgT120I GGNCC 4 cut(s) 676, 768, 1181, 1359
BmiI GGNNCC 6 cut(s) 127, 358, 1182, 1360, 1361, 1461
BmrFI CCNGG 3 cut(s) 88, 1001, 1185
BmrI ACTGGG 2 cut(s) 239, 1532
BmsI GCATC 4 cut(s) 58, 158, 747, 1529
BmuI ACTGGG 2 cut(s) 239, 1532
BpmI CTGGAG 1 cut(s) 112
Bpu10I CCTNAGC 1 cut(s) 435
BpuEI CTTGAG 3 cut(s) 1319, 1336, 1349
Bsa29I ATCGAT 2 cut(s) 1287, 1563
BsaAI YACGTR 2 cut(s) 185, 835
BsaJI CCNNGG 2 cut(s) 86, 1144
Bsc4I CCNNNNNNNGG 2 cut(s) 953, 1601
Bse1I ACTGG 3 cut(s) 245, 531, 1538
Bse3DI GCAATG 1 cut(s) 1276
BseBI CCWGG 3 cut(s) 88, 1001, 1185
BseCI ATCGAT 2 cut(s) 1287, 1563
BseDI CCNNGG 2 cut(s) 86, 1144
BseGI GGATG 2 cut(s) 195, 887
BseLI CCNNNNNNNGG 2 cut(s) 953, 1601
BseMI GCAATG 1 cut(s) 1276
BseMII CTCAG 4 cut(s) 449, 807, 1391, 1503
BseNI ACTGG 3 cut(s) 245, 531, 1538
BseSI GKGCMC 1 cut(s) 1462
BseXI GCAGC 3 cut(s) 1029, 1406, 1417
BsgI GTGCAG 1 cut(s) 815
Bsh1236I CGCG 1 cut(s) 1146
BshFI GGCC 3 cut(s) 688, 770, 957
BshNI GGYRCC 1 cut(s) 1459
BshVI ATCGAT 2 cut(s) 1287, 1563
BslFI GGGAC 1 cut(s) 1372
BslI CCNNNNNNNGG 2 cut(s) 953, 1601
BsmAI GTCTC 1 cut(s) 216
BsmFI GGGAC 1 cut(s) 1372
BsnI GGCC 3 cut(s) 688, 770, 957
Bsp1286I GDGCHC 3 cut(s) 87, 128, 1462
Bsp143I GATC 6 cut(s) 585, 733, 825, 1085, 1284, 1372
BspACI CCGC 2 cut(s) 1144, 1146
BspANI GGCC 3 cut(s) 688, 770, 957
BspCNI CTCAG 4 cut(s) 448, 808, 1392, 1504
BspDI ATCGAT 2 cut(s) 1287, 1563
BspFNI CGCG 1 cut(s) 1146
BspLI GGNNCC 6 cut(s) 127, 358, 1182, 1360, 1361, 1461
BspMAI CTGCAG 1 cut(s) 1155
BspPI GGATC 1 cut(s) 820
BspT107I GGYRCC 1 cut(s) 1459
BspTI CTTAAG 1 cut(s) 215
BsrDI GCAATG 1 cut(s) 1276
BsrI ACTGG 3 cut(s) 245, 531, 1538
BssECI CCNNGG 2 cut(s) 86, 1144
BssMI GATC 6 cut(s) 585, 733, 825, 1085, 1284, 1372
Bst2UI CCWGG 3 cut(s) 88, 1001, 1185
Bst4CI ACNGT 4 cut(s) 450, 535, 1174, 1555
BstAFI CTTAAG 1 cut(s) 215
BstAPI GCANNNNNTGC 1 cut(s) 1391
BstBAI YACGTR 2 cut(s) 185, 835
BstC8I GCNNGC 2 cut(s) 553, 645
BstDEI CTNAG 7 cut(s) 435, 741, 775, 816, 1082, 1400, 1512
BstDSI CCRYGG 1 cut(s) 1144
BstENI CCTNNNNNAGG 1 cut(s) 951
BstF5I GGATG 2 cut(s) 195, 887
BstFNI CGCG 1 cut(s) 1146
BstKTI GATC 6 cut(s) 588, 736, 828, 1088, 1287, 1375
BstMAI GTCTC 1 cut(s) 216
BstMBI GATC 6 cut(s) 585, 733, 825, 1085, 1284, 1372
BstMWI GCNNNNNNNGC 6 cut(s) 13, 431, 440, 640, 1303, 1391
BstNI CCWGG 3 cut(s) 88, 1001, 1185
BstNSI RCATGY 1 cut(s) 79
BstSCI CCNGG 3 cut(s) 86, 999, 1183
BstSFI CTRYAG 2 cut(s) 671, 1151
BstSLI GKGCMC 1 cut(s) 1462
BstUI CGCG 1 cut(s) 1146
BstV1I GCAGC 3 cut(s) 1029, 1406, 1417
BstX2I RGATCY 1 cut(s) 733
BstXI CCANNNNNNTGG 1 cut(s) 353
BstYI RGATCY 1 cut(s) 733
Bsu15I ATCGAT 2 cut(s) 1287, 1563
BsuI GTATCC 1 cut(s) 1151
BsuRI GGCC 3 cut(s) 688, 770, 957
BsuTUI ATCGAT 2 cut(s) 1287, 1563
BtgI CCRYGG 1 cut(s) 1144
BtsCI GGATG 2 cut(s) 195, 887
BtsIMutI CAGTG 4 cut(s) 1179, 1397, 1545, 1551
Cac8I GCNNGC 2 cut(s) 553, 645
Cfr13I GGNCC 4 cut(s) 676, 768, 1181, 1359
Cfr42I CCGCGG 1 cut(s) 1147
ClaI ATCGAT 2 cut(s) 1287, 1563
Csp6I GTAC 6 cut(s) 283, 451, 610, 652, 807, 1484
CviAII CATG 4 cut(s) 76, 109, 347, 1628
CviQI GTAC 6 cut(s) 283, 451, 610, 652, 807, 1484
DdeI CTNAG 7 cut(s) 435, 741, 775, 816, 1082, 1400, 1512
DpnI GATC 6 cut(s) 587, 735, 827, 1087, 1286, 1374
DpnII GATC 6 cut(s) 585, 733, 825, 1085, 1284, 1372
DraI TTTAAA 1 cut(s) 559
EaeI YGGCCR 1 cut(s) 686
Eco147I AGGCCT 1 cut(s) 957
Eco24I GRGCYC 2 cut(s) 87, 128
Eco47I GGWCC 3 cut(s) 676, 1181, 1359
Eco57I CTGAAG 3 cut(s) 384, 831, 1022
EcoNI CCTNNNNNAGG 1 cut(s) 951
EcoO109I RGGNCCY 1 cut(s) 1359
EcoRI GAATTC 3 cut(s) 132, 976, 1259
EcoRII CCWGG 3 cut(s) 86, 999, 1183
EcoT22I ATGCAT 1 cut(s) 1522
EcoT38I GRGCYC 2 cut(s) 87, 128
FaeI CATG 4 cut(s) 79, 112, 350, 1631
FalI AAGNNNNNCTT 2 cut(s) 1604, 1636
FaqI GGGAC 1 cut(s) 1372
FatI CATG 4 cut(s) 75, 108, 346, 1627
FauNDI CATATG 1 cut(s) 319
FbaI TGATCA 1 cut(s) 585
Fnu4HI GCNGC 3 cut(s) 1043, 1395, 1406
FokI GGATG 2 cut(s) 182, 874
FriOI GRGCYC 2 cut(s) 87, 128
Fsp4HI GCNGC 3 cut(s) 1043, 1395, 1406
FspBI CTAG 1 cut(s) 704
GluI GCNGC 3 cut(s) 1043, 1395, 1406
GsuI CTGGAG 1 cut(s) 112
HaeIII GGCC 3 cut(s) 688, 770, 957
Hin1II CATG 4 cut(s) 79, 112, 350, 1631
HindIII AAGCTT 5 cut(s) 14, 553, 917, 1235, 1295
HinfI GANTC 6 cut(s) 36, 47, 490, 818, 909, 1498
HphI GGTGA 3 cut(s) 77, 255, 499
Hpy166II GTNNAC 2 cut(s) 991, 1484
Hpy188I TCNGA 5 cut(s) 35, 1354, 1513, 1525, 1583
Hpy188III TCNNGA 9 cut(s) 129, 137, 325, 376, 722, 800, 913, 1010, 1264
Hpy8I GTNNAC 2 cut(s) 991, 1484
HpyAV CCTTC 7 cut(s) 56, 226, 781, 947, 1081, 1171, 1578
HpyCH4III ACNGT 4 cut(s) 450, 535, 1174, 1555
HpyCH4IV ACGT 3 cut(s) 184, 834, 1223
HpyF10VI GCNNNNNNNGC 6 cut(s) 13, 431, 440, 640, 1303, 1391
HpyF3I CTNAG 7 cut(s) 435, 741, 775, 816, 1082, 1400, 1512
HpySE526I ACGT 3 cut(s) 184, 834, 1223
Hsp92II CATG 4 cut(s) 79, 112, 350, 1631
KflI GGGWCCC 1 cut(s) 1359
Ksp22I TGATCA 1 cut(s) 585
KspI CCGCGG 1 cut(s) 1147
Kzo9I GATC 6 cut(s) 585, 733, 825, 1085, 1284, 1372
LmnI GCTCC 3 cut(s) 131, 362, 1538
Lsp1109I GCAGC 3 cut(s) 1029, 1406, 1417
LweI GCATC 4 cut(s) 58, 158, 747, 1529
MaeI CTAG 1 cut(s) 704
MaeII ACGT 3 cut(s) 184, 834, 1223
MaeIII GTNAC 6 cut(s) 261, 487, 598, 782, 1103, 1587
MalI GATC 6 cut(s) 587, 735, 827, 1087, 1286, 1374
MboI GATC 6 cut(s) 585, 733, 825, 1085, 1284, 1372
MboII GAAGA 8 cut(s) 31, 144, 556, 704, 743, 851, 972, 1334
MfeI CAATTG 1 cut(s) 337
MflI RGATCY 1 cut(s) 733
MhlI GDGCHC 3 cut(s) 87, 128, 1462
MlsI TGGCCA 1 cut(s) 688
MluNI TGGCCA 1 cut(s) 688
MlyI GAGTC 4 cut(s) 56, 484, 827, 918
Mox20I TGGCCA 1 cut(s) 688
Mph1103I ATGCAT 1 cut(s) 1522
MroXI GAANNNNTTC 1 cut(s) 711
MscI TGGCCA 1 cut(s) 688
MseI TTAA 7 cut(s) 216, 254, 401, 558, 665, 852, 960
MslI CAYNNNNRTG 2 cut(s) 351, 1011
Msp20I TGGCCA 1 cut(s) 688
MspA1I CMGCKG 2 cut(s) 1042, 1146
MspCI CTTAAG 1 cut(s) 215
MspR9I CCNGG 3 cut(s) 88, 1001, 1185
MunI CAATTG 1 cut(s) 337
MvaI CCWGG 3 cut(s) 88, 1001, 1185
MvnI CGCG 1 cut(s) 1146
MwoI GCNNNNNNNGC 6 cut(s) 13, 431, 440, 640, 1303, 1391
NdeI CATATG 1 cut(s) 319
NdeII GATC 6 cut(s) 585, 733, 825, 1085, 1284, 1372
NlaIII CATG 4 cut(s) 79, 112, 350, 1631
NlaIV GGNNCC 6 cut(s) 127, 358, 1182, 1360, 1361, 1461
NmuCI GTSAC 4 cut(s) 261, 487, 598, 1587
NsiI ATGCAT 1 cut(s) 1522
NspI RCATGY 1 cut(s) 79
PceI AGGCCT 1 cut(s) 957
PciI ACATGT 1 cut(s) 75
PdmI GAANNNNTTC 1 cut(s) 711
PfeI GAWTC 2 cut(s) 36, 1498
PfoI TCCNGGA 1 cut(s) 1183
PkrI GCNGC 3 cut(s) 1044, 1396, 1407
PleI GAGTC 4 cut(s) 55, 484, 826, 917
PpsI GAGTC 4 cut(s) 55, 484, 826, 917
Ppu21I YACGTR 2 cut(s) 185, 835
PpuMI RGGWCCY 1 cut(s) 1359
PscI ACATGT 1 cut(s) 75
PshBI ATTAAT 1 cut(s) 665
PsiI TTATAA 2 cut(s) 504, 1437
Psp1406I AACGTT 1 cut(s) 1223
Psp5II RGGWCCY 1 cut(s) 1359
Psp6I CCWGG 3 cut(s) 86, 999, 1183
PspGI CCWGG 3 cut(s) 86, 999, 1183
PspN4I GGNNCC 6 cut(s) 127, 358, 1182, 1360, 1361, 1461
PspPI GGNCC 4 cut(s) 676, 768, 1181, 1359
PspPPI RGGWCCY 1 cut(s) 1359
PstI CTGCAG 1 cut(s) 1155
PsuI RGATCY 1 cut(s) 733
PvuII CAGCTG 1 cut(s) 1042
RsaI GTAC 6 cut(s) 284, 452, 611, 653, 808, 1485
RsaNI GTAC 6 cut(s) 283, 451, 610, 652, 807, 1484
RseI CAYNNNNRTG 2 cut(s) 351, 1011
SacII CCGCGG 1 cut(s) 1147
SaqAI TTAA 7 cut(s) 216, 254, 401, 558, 665, 852, 960
SatI GCNGC 3 cut(s) 1043, 1395, 1406
Sau3AI GATC 6 cut(s) 585, 733, 825, 1085, 1284, 1372
Sau96I GGNCC 4 cut(s) 676, 768, 1181, 1359
ScaI AGTACT 1 cut(s) 808
SchI GAGTC 4 cut(s) 56, 484, 827, 918
ScrFI CCNGG 3 cut(s) 88, 1001, 1185
SduI GDGCHC 3 cut(s) 87, 128, 1462
SfaNI GCATC 4 cut(s) 58, 158, 747, 1529
SfcI CTRYAG 2 cut(s) 671, 1151
Sfr303I CCGCGG 1 cut(s) 1147
SgrBI CCGCGG 1 cut(s) 1147
SinI GGWCC 3 cut(s) 676, 1181, 1359
SmiMI CAYNNNNRTG 2 cut(s) 351, 1011
SmlI CTYRAG 4 cut(s) 215, 1298, 1315, 1364
SmoI CTYRAG 4 cut(s) 215, 1298, 1315, 1364
SseBI AGGCCT 1 cut(s) 957
SsiI CCGC 2 cut(s) 1144, 1146
SspI AATATT 1 cut(s) 385
SspMI CTAG 1 cut(s) 704
StuI AGGCCT 1 cut(s) 957
StyD4I CCNGG 3 cut(s) 86, 999, 1183
TaaI ACNGT 4 cut(s) 450, 535, 1174, 1555
TaiI ACGT 3 cut(s) 187, 837, 1226
TaqI TCGA 4 cut(s) 81, 1009, 1287, 1563
TatI WGTACW 3 cut(s) 450, 651, 806
TfiI GAWTC 2 cut(s) 36, 1498
Tru1I TTAA 7 cut(s) 216, 254, 401, 558, 665, 852, 960
Tru9I TTAA 7 cut(s) 216, 254, 401, 558, 665, 852, 960
TscAI CASTG 4 cut(s) 1179, 1404, 1545, 1558
TseFI GTSAC 4 cut(s) 261, 487, 598, 1587
TseI GCWGC 3 cut(s) 1042, 1394, 1405
Tsp45I GTSAC 4 cut(s) 261, 487, 598, 1587
TspDTI ATGAA 7 cut(s) 108, 184, 995, 1262, 1307, 1497, 1596
TspGWI ACGGA 1 cut(s) 218
TspRI CASTG 4 cut(s) 1179, 1404, 1545, 1558
Vha464I CTTAAG 1 cut(s) 215
VpaK11BI GGWCC 3 cut(s) 676, 1181, 1359
VspI ATTAAT 1 cut(s) 665
XagI CCTNNNNNAGG 1 cut(s) 951
XapI RAATTY 7 cut(s) 56, 132, 166, 623, 976, 1211, 1259
XceI RCATGY 1 cut(s) 79
XcmI CCANNNNNNNNNTGG 1 cut(s) 473
XmnI GAANNNNTTC 1 cut(s) 711
XspI CTAG 1 cut(s) 704
ZrmI AGTACT 1 cut(s) 808
Zsp2I ATGCAT 1 cut(s) 1522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.