pycom14g17710

NLI interacting factor-like phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
19550750 .. 19554108
3359 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g17710.2

Sequence Viewer

Length: 2382 bp
ATGCTAGAATTGCCACAGCCACTTATGGGAGGAATGAGCACGAAAATCAATCCAGAAAGTTCTGAACCTATTGAAGATTTGACTTCCTCAAGAAAAAAGAAGAAAAAGGCTCGGAAGAAGTCCGAAACCTGGGAGAGTAATGACAAAAGTTGTGGTAATGACAAAAGTTGTGAGCTTTCAGTTGGTATTTCTTTAGTGGAAAATATTATGCCAGGAGTACATCCACCTCAACAACCTCCAGTCTCAGAATCCTCAAAACAAAAGCTAGAATTGCCACAGCCCCTTATGGAAGGAATTAGCGCAAAGATTAATTCAGAAAGTTCTGAACCTATTGAAGATTTGAGTTCCTCAAGAAAAAAGAAGAAAAAGAATCCGAAGAAGAATTCTGAAACCAGGGAGAGTAATGACAAAAGTTGTGAGCTTTCTGTTGGTATTTCCTTAGTGGAAAGTATTATGCCAGTAGTAGATCCGTCTCAACAGCCTCCAGTCTCAGAATCCTCAGAGCAAAAGCTAGAATTGCTACAACCCCTTATGGAAGGAATTAACGCAAAAATCAATTCGGAAAGTTCTGGCCTTGTTGAAGATTTGAGTTCCTCAAGAAAAAAGAAGAAAAAGACACAGAAGAAAAGGTCGGAAGCCCAGGAGAGTAATGATGAAAGTTGTGGGAATGACAAAAGTGGTGAGTTTTCAGTTGGTAGCTCTTTAGTGGAAAATATTGTGCCAGGAGTAGATCTGTCTCAAAAGCCTCCAGTCTCAGAATCCTCAGAACAAAAGCTAGAATTGCCACAATCACTTATGGACGGGATTAGCACGAAAATTAATTCAGAAAGTTCTGAACCTATTGGAGATTTGAGTTCCTCAAGAAAAAAGAAGAAAAAGTTTAAAACTCAGGAGAGTAATGATAAAAGTTGTGAGCTTTCAGTTAGTATTTCTTTTGTGGAAAATTTTATGCCAGGAATAGATCCCTCTCAGCAGCCTCCAGACTCAGAATTCTCAGAGGAAAAACTAGATTTGCCACAACCACTTGTGAAGGGAAATAGCGCGGCAGCAAGTTCAGAAGGTCCCAAGTCGCTTAATGTGGACTTGAGTTGCTCACAAGAACAGAAGAAGAAGCGAAAGAGAAGGCATAAGACCAATGAGTGTATTGATGAAAGATGTGATCTTTCTGTTGGTACTTCTTTAGGAGGAAATACTTTTCCAGGAGTAGATCTTACTGTACAGCCTCCACTTGCAATGTTCTCAAAACAAGATCTAGAAGTGGAAAAACCTCTTGTTGAGGGAATTAAACAAAGAATCAATTCTGAGAGTATCGAACTCATTGAAGTTTTGAGTTGCTCACAAGGGAGAAAGGATCGGAAGAAAAGGCTTAAAATGCGTAAGAGTAATGATACAAGTTCTGATCCTTCTGTTGGTACTTCAGTGGAGAAGATTATTCCAGGAGCGGATCCATCTCCACAGCCTCCGGTAGCAGTAGTTTCAGACCTACATGTGATACAATTACTTTTGGAGGAAAGTACTTTACAGGAGAAAAATGAGGACAAGGATCAGAACAAGAGATCTAATGCCTCAGGAAATAACAACACCAACCACCAAGTTTGCGCTGGCTTTCCTGGCCAGGTTGATTTGGGTGCTGTGGTGAAGGAAGGTAGTTGTTCACAGATACCATATTGGGCTGTTGAAAGACCTCTTGTTTTTGTTTCTTGGAAAAAGCTTCTCATTCTTGATGTAAACGGGCTTCTTGCTGATATTGTTCAACTGGTTCCCCAGCAGATGAAACTGTATAAACCAGACAAAATGATAGCAAGGAAATCAGTTTTTAAGAGGCCATTTTATGATTCTTTTCTACTGTTCTGCCTTGACTATTTTAACGTGGCTATTTGGTCTTCAAGAAACAAGAAGAACGTGGACGCGGTGGTAGATTATCTTTTGGGAATTTCCAAAAAGAAATTGCTTTTTTGCTGGAATCAATCCCACTGTACTAAAACGAAGTTCAAAACTCTTGACAACAAGGAAAAACCCCTTGTTTTCAAAGAACTTAGAAAGTTATGGGAGAAGCATGATCGATCTGATCTTCCATTTGCAAGGGGAGAGTACAACGAGACAAACACATTATTAGTGGATGATTCTCCATACAAAGCTTTATGCAATCCAGAGAACACAGCAATATTTCCCTTCCCATATCGATTCAAGAATCGAACAGATAGATCACTAGGGGTTGGAGGCGATCTTCGTCGTTATGTGGAAGGATTAGTTTATGCTCCAAATGTTCAAGAATATGTGAAGCACAATCGATTTGGTCAACGCCCCATAACAAAGAAAGCTAAATCATGGAAATTTTATAGTCAAGTTTTAAGGGATCAAGCGCAGTCACCCAAAAATTGA

Protein Analysis

794

Amino Acids

88.61

Weight (kDa)

8.81

Isoelectric Point (pI)

59.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1442
AccII CGCG 2 cut(s) 1043, 1910
AciI CCGC 3 cut(s) 1043, 1442, 1910
AclWI GGATC 8 cut(s) 461, 956, 1359, 1394, 1439, 1452, 1551, 2364
AcoI YGGCCR 1 cut(s) 1612
AcsI RAATTY 5 cut(s) 382, 943, 989, 1932, 2333
AcuI CTGAAG 1 cut(s) 1401
AfaI GTAC 7 cut(s) 219, 1174, 1218, 1414, 1516, 1978, 2093
AfiI CCNNNNNNNGG 3 cut(s) 26, 129, 1409
AflIII ACRYGT 1 cut(s) 1486
Alw21I GWGCWC 1 cut(s) 41
Alw26I GTCTC 6 cut(s) 247, 477, 493, 741, 757, 2093
AlwI GGATC 8 cut(s) 461, 956, 1359, 1394, 1439, 1452, 1551, 2364
AoxI GGCC 3 cut(s) 571, 1612, 1823
ApeKI GCWGC 2 cut(s) 973, 1046
ApoI RAATTY 5 cut(s) 382, 943, 989, 1932, 2333
AseI ATTAAT 2 cut(s) 309, 819
Asp700I GAANNNNTTC 1 cut(s) 1297
AspLEI GCGC 4 cut(s) 302, 1043, 1601, 2365
AspS9I GGNCC 1 cut(s) 1061
AsuHPI GGTGA 3 cut(s) 692, 1648, 2361
AvaII GGWCC 1 cut(s) 1061
AxyI CCTNAGG 1 cut(s) 1567
BaeI ACNNNNGTAYC 2 cut(s) 1404, 1437
BalI TGGCCA 1 cut(s) 1614
BamHI GGATCC 1 cut(s) 1444
BarI GAAGNNNNNNTAC 2 cut(s) 1719, 1751
BbsI GAAGAC 1 cut(s) 1875
Bbv12I GWGCWC 1 cut(s) 41
BbvI GCAGC 2 cut(s) 985, 1058
BccI CCATC 1 cut(s) 1456
BcoDI GTCTC 6 cut(s) 247, 477, 493, 741, 757, 2093
BfaI CTAG 7 cut(s) 5, 266, 512, 776, 1007, 1253, 2210
BglII AGATCT 4 cut(s) 730, 1207, 1249, 1556
BisI GCNGC 3 cut(s) 974, 1044, 1047
BlsI GCNGC 3 cut(s) 975, 1045, 1048
BmcAI AGTACT 1 cut(s) 1516
Bme18I GGWCC 1 cut(s) 1061
BmgT120I GGNCC 1 cut(s) 1061
BmiI GGNNCC 3 cut(s) 1063, 1446, 1761
BpiI GAAGAC 1 cut(s) 1875
BpmI CTGGAG 4 cut(s) 222, 468, 732, 963
BpuEI CTTGAG 5 cut(s) 73, 334, 580, 844, 1105
Bsa29I ATCGAT 3 cut(s) 2062, 2182, 2290
BsaJI CCNNGG 3 cut(s) 129, 393, 639
BsaWI WCCGGW 1 cut(s) 1462
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 129, 1409
Bse1I ACTGG 5 cut(s) 239, 458, 485, 749, 1761
Bse21I CCTNAGG 1 cut(s) 1567
Bse3DI GCAATG 1 cut(s) 1239
BseCI ATCGAT 3 cut(s) 2062, 2182, 2290
BseDI CCNNGG 3 cut(s) 129, 393, 639
BseGI GGATG 2 cut(s) 220, 2125
BseLI CCNNNNNNNGG 3 cut(s) 26, 129, 1409
BseMI GCAATG 1 cut(s) 1239
BseNI ACTGG 5 cut(s) 239, 458, 485, 749, 1761
BseXI GCAGC 2 cut(s) 985, 1058
BseYI CCCAGC 1 cut(s) 1764
Bsh1236I CGCG 2 cut(s) 1043, 1910
BshFI GGCC 3 cut(s) 573, 1614, 1825
BshVI ATCGAT 3 cut(s) 2062, 2182, 2290
BsiHKAI GWGCWC 1 cut(s) 41
BsiSI CCGG 1 cut(s) 1463
BslFI GGGAC 1 cut(s) 1047
BslI CCNNNNNNNGG 3 cut(s) 26, 129, 1409
BsmAI GTCTC 6 cut(s) 247, 477, 493, 741, 757, 2093
BsmBI CGTCTC 1 cut(s) 477
BsmFI GGGAC 1 cut(s) 1047
BsnI GGCC 3 cut(s) 573, 1614, 1825
Bsp1286I GDGCHC 1 cut(s) 41
Bsp1407I TGTACA 1 cut(s) 1216
BspACI CCGC 3 cut(s) 1043, 1442, 1910
BspANI GGCC 3 cut(s) 573, 1614, 1825
BspDI ATCGAT 3 cut(s) 2062, 2182, 2290
BspFNI CGCG 2 cut(s) 1043, 1910
BspLI GGNNCC 3 cut(s) 1063, 1446, 1761
BspPI GGATC 8 cut(s) 461, 956, 1359, 1394, 1439, 1452, 1551, 2364
BsrBI CCGCTC 1 cut(s) 1442
BsrDI GCAATG 1 cut(s) 1239
BsrGI TGTACA 1 cut(s) 1216
BsrI ACTGG 5 cut(s) 239, 458, 485, 749, 1761
BssECI CCNNGG 3 cut(s) 129, 393, 639
Bst4CI ACNGT 4 cut(s) 1216, 1779, 1848, 1976
BstAUI TGTACA 1 cut(s) 1216
BstC8I GCNNGC 1 cut(s) 1603
BstF5I GGATG 2 cut(s) 220, 2125
BstFNI CGCG 2 cut(s) 1043, 1910
BstHHI GCGC 4 cut(s) 302, 1043, 1601, 2365
BstMAI GTCTC 6 cut(s) 247, 477, 493, 741, 757, 2093
BstMWI GCNNNNNNNGC 6 cut(s) 10, 271, 517, 781, 1372, 1611
BstNSI RCATGY 1 cut(s) 1490
BstUI CGCG 2 cut(s) 1043, 1910
BstV1I GCAGC 2 cut(s) 985, 1058
BstV2I GAAGAC 1 cut(s) 1875
BstX2I RGATCY 7 cut(s) 466, 730, 961, 1207, 1249, 1444, 1556
BstYI RGATCY 7 cut(s) 466, 730, 961, 1207, 1249, 1444, 1556
Bsu15I ATCGAT 3 cut(s) 2062, 2182, 2290
Bsu36I CCTNAGG 1 cut(s) 1567
BsuRI GGCC 3 cut(s) 573, 1614, 1825
BsuTUI ATCGAT 3 cut(s) 2062, 2182, 2290
BtsCI GGATG 2 cut(s) 220, 2125
BtsIMutI CAGTG 2 cut(s) 1425, 1972
Cac8I GCNNGC 1 cut(s) 1603
CfoI GCGC 4 cut(s) 302, 1043, 1601, 2365
Cfr13I GGNCC 1 cut(s) 1061
ClaI ATCGAT 3 cut(s) 2062, 2182, 2290
CseI GACGC 1 cut(s) 1916
Csp6I GTAC 7 cut(s) 218, 1173, 1217, 1413, 1515, 1977, 2092
CspCI CAANNNNNGTGG 4 cut(s) 133, 168, 1577, 1612
CviAII CATG 3 cut(s) 1487, 2057, 2328
CviQI GTAC 7 cut(s) 218, 1173, 1217, 1413, 1515, 1977, 2092
DraI TTTAAA 1 cut(s) 883
EaeI YGGCCR 1 cut(s) 1612
Eco47I GGWCC 1 cut(s) 1061
Eco57I CTGAAG 1 cut(s) 1401
Eco81I CCTNAGG 1 cut(s) 1567
EcoO109I RGGNCCY 1 cut(s) 1061
EcoRI GAATTC 2 cut(s) 382, 989
Esp3I CGTCTC 1 cut(s) 477
FaeI CATG 3 cut(s) 1490, 2060, 2331
FaqI GGGAC 1 cut(s) 1047
FatI CATG 3 cut(s) 1486, 2056, 2327
Fnu4HI GCNGC 3 cut(s) 974, 1044, 1047
FokI GGATG 2 cut(s) 207, 2132
Fsp4HI GCNGC 3 cut(s) 974, 1044, 1047
FspBI CTAG 7 cut(s) 5, 266, 512, 776, 1007, 1253, 2210
GlaI GCGC 4 cut(s) 301, 1042, 1600, 2364
GluI GCNGC 3 cut(s) 974, 1044, 1047
GsaI CCCAGC 1 cut(s) 1768
GsuI CTGGAG 4 cut(s) 222, 468, 732, 963
HaeIII GGCC 3 cut(s) 573, 1614, 1825
HapII CCGG 1 cut(s) 1463
HgaI GACGC 1 cut(s) 1916
HhaI GCGC 4 cut(s) 302, 1043, 1601, 2365
Hin1II CATG 3 cut(s) 1490, 2060, 2331
Hin6I GCGC 4 cut(s) 300, 1041, 1599, 2363
HinP1I GCGC 4 cut(s) 300, 1041, 1599, 2363
HincII GTYRAC 1 cut(s) 2300
HindII GTYRAC 1 cut(s) 2300
HindIII AAGCTT 2 cut(s) 1709, 2136
HpaII CCGG 1 cut(s) 1463
HphI GGTGA 3 cut(s) 692, 1648, 2361
Hpy166II GTNNAC 5 cut(s) 1081, 1655, 1729, 1906, 2300
Hpy8I GTNNAC 5 cut(s) 1081, 1655, 1729, 1906, 2300
Hpy99I CGWCG 1 cut(s) 2235
HpyCH4III ACNGT 4 cut(s) 1216, 1779, 1848, 1976
HpyCH4IV ACGT 2 cut(s) 1869, 1902
HpyCH4V TGCA 3 cut(s) 1232, 2081, 2145
HpyF10VI GCNNNNNNNGC 6 cut(s) 10, 271, 517, 781, 1372, 1611
HpySE526I ACGT 2 cut(s) 1869, 1902
Hsp92II CATG 3 cut(s) 1490, 2060, 2331
HspAI GCGC 4 cut(s) 300, 1041, 1599, 2363
LmnI GCTCC 2 cut(s) 1439, 2263
Lsp1109I GCAGC 2 cut(s) 985, 1058
MaeI CTAG 7 cut(s) 5, 266, 512, 776, 1007, 1253, 2210
MaeII ACGT 2 cut(s) 1869, 1902
MaeIII GTNAC 1 cut(s) 2367
MbiI CCGCTC 1 cut(s) 1442
MflI RGATCY 7 cut(s) 466, 730, 961, 1207, 1249, 1444, 1556
MhlI GDGCHC 1 cut(s) 41
MlsI TGGCCA 1 cut(s) 1614
MluNI TGGCCA 1 cut(s) 1614
MlyI GAGTC 1 cut(s) 977
MmeI TCCRAC 2 cut(s) 612, 2197
Mox20I TGGCCA 1 cut(s) 1614
MroXI GAANNNNTTC 1 cut(s) 1297
MscI TGGCCA 1 cut(s) 1614
Msp20I TGGCCA 1 cut(s) 1614
MspI CCGG 1 cut(s) 1463
MvnI CGCG 2 cut(s) 1043, 1910
MwoI GCNNNNNNNGC 6 cut(s) 10, 271, 517, 781, 1372, 1611
NlaIII CATG 3 cut(s) 1490, 2060, 2331
NlaIV GGNNCC 3 cut(s) 1063, 1446, 1761
NmuCI GTSAC 1 cut(s) 2367
NspI RCATGY 1 cut(s) 1490
PciI ACATGT 1 cut(s) 1486
PdmI GAANNNNTTC 1 cut(s) 1297
PfoI TCCNGGA 2 cut(s) 1198, 1435
PkrI GCNGC 3 cut(s) 975, 1045, 1048
PleI GAGTC 1 cut(s) 977
PpsI GAGTC 1 cut(s) 977
PpuMI RGGWCCY 1 cut(s) 1061
PscI ACATGT 1 cut(s) 1486
PshBI ATTAAT 2 cut(s) 309, 819
Psp5II RGGWCCY 1 cut(s) 1061
PspFI CCCAGC 1 cut(s) 1764
PspN4I GGNNCC 3 cut(s) 1063, 1446, 1761
PspPI GGNCC 1 cut(s) 1061
PspPPI RGGWCCY 1 cut(s) 1061
PsuI RGATCY 7 cut(s) 466, 730, 961, 1207, 1249, 1444, 1556
RsaI GTAC 7 cut(s) 219, 1174, 1218, 1414, 1516, 1978, 2093
RsaNI GTAC 7 cut(s) 218, 1173, 1217, 1413, 1515, 1977, 2092
SatI GCNGC 3 cut(s) 974, 1044, 1047
Sau96I GGNCC 1 cut(s) 1061
ScaI AGTACT 1 cut(s) 1516
SchI GAGTC 1 cut(s) 977
SduI GDGCHC 1 cut(s) 41
SinI GGWCC 1 cut(s) 1061
SmlI CTYRAG 5 cut(s) 88, 349, 595, 859, 1084
SmoI CTYRAG 5 cut(s) 88, 349, 595, 859, 1084
SsiI CCGC 3 cut(s) 1043, 1442, 1910
SspI AATATT 3 cut(s) 205, 715, 2166
SspMI CTAG 7 cut(s) 5, 266, 512, 776, 1007, 1253, 2210
TaaI ACNGT 4 cut(s) 1216, 1779, 1848, 1976
TaiI ACGT 2 cut(s) 1872, 1905
TaqI TCGA 5 cut(s) 1311, 2062, 2182, 2194, 2290
TatI WGTACW 5 cut(s) 217, 1216, 1514, 1976, 2091
TauI GCSGC 1 cut(s) 1046
TscAI CASTG 2 cut(s) 1425, 1979
TseFI GTSAC 1 cut(s) 2367
TseI GCWGC 2 cut(s) 973, 1046
Tsp45I GTSAC 1 cut(s) 2367
TspDTI ATGAA 3 cut(s) 669, 1164, 1787
TspGWI ACGGA 1 cut(s) 459
TspRI CASTG 2 cut(s) 1425, 1979
VpaK11BI GGWCC 1 cut(s) 1061
VspI ATTAAT 2 cut(s) 309, 819
XapI RAATTY 5 cut(s) 382, 943, 989, 1932, 2333
XbaI TCTAGA 1 cut(s) 1252
XceI RCATGY 1 cut(s) 1490
XcmI CCANNNNNNNNNTGG 1 cut(s) 1598
XmnI GAANNNNTTC 1 cut(s) 1297
XspI CTAG 7 cut(s) 5, 266, 512, 776, 1007, 1253, 2210
ZrmI AGTACT 1 cut(s) 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.