pycom17g19910

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000447
Physical Location & Seq
Reverse (-)
17984521 .. 17986520
2000 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 924 bp
ATGTCATATTTGCTAACTGGATCGATCACAGTGTTATTAATCATTACTTTCTTAGCCACATCAAGTAGGGCATTCTTCAAGGGCATTGAGACATGGAAAAAAGAAACTCTAGTAAAAAAGGAGGCTGCTAGACGGATGCAGTCAAATGGTGATGATGCTACTGCAGAAGTTGATTACAAGCCTCTACCCAGTGGCCCGAGCAACGGCACTCCAACAGAAACCGGGGAATCCAAAAGAACAGAGGTTTCTATCTTTGAGAATCTTTACTGGAAGGAACTTCTGATTCTTTTTGCTGTCTGGATTATAATTCTTGCATTGCAGATCGCTAAGAATTATACAACAACTTGTTCGGCAGCATATTGGGCATATAATCTCTTGCAGATCCCCGTGGCTTTCGGAGTAACTATATTCGAGGCAGTTAAACTGTACAAAGGAGATAGAGTGATTGCGTCCCGGGCAGAATCAAACACAAATTGGACAGTAAACCAGCTTGTTCTTTGTAGTGCCTGTGGTATCATAGCCGGTATAGTTGGTGGATTGCTTGGTCTTGGTGGAGGCTTCATTTTAGGTCCTGTTTTTCTGGAGCTAGGAATCCCACCTCAGGTCTCAAGTGCGACAGCCACATTTGCCATGACATTTTCTGCCTCCCTGTCTGTTGTAGAGTACTACCTCCTAAAACGATTTCCGATTCCTTATGCTCTCTACTTTACTGCTGTGGCCACATTTTCAGCCCTAGTAGGGCAATCAGTGGTGAGAAAGGTAGTCAGTTTTTTGGGGAGAGCATCTATAATTATCTTCATTCTTGCCTTCACAATCTTTGTGAGTGCAATATCACTAGGTGGAGTTGGAATAGTAGATATGATTGAAAAGATTAAGCATAAAGAGTACATGGGATTTGAAAACATCTGCACTTATGATGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

308

Amino Acids

33.45

Weight (kDa)

8.55

Isoelectric Point (pI)

33.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 169 - 274 3.4e-11 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 305
AclWI GGATC 2 cut(s) 28, 376
AcoI YGGCCR 1 cut(s) 717
AdeI CACNNNGTG 1 cut(s) 839
AfaI GTAC 3 cut(s) 428, 665, 887
AfiI CCNNNNNNNGG 3 cut(s) 203, 601, 738
AgsI TTSAA 3 cut(s) 79, 866, 899
AluBI AGCT 2 cut(s) 490, 586
AluI AGCT 2 cut(s) 490, 586
Alw26I GTCTC 2 cut(s) 83, 610
AlwI GGATC 2 cut(s) 28, 376
Ama87I CYCGRG 2 cut(s) 196, 453
AoxI GGCC 2 cut(s) 193, 717
ApeKI GCWGC 2 cut(s) 125, 353
AseI ATTAAT 1 cut(s) 38
AspS9I GGNCC 2 cut(s) 194, 569
AsuC2I CCSGG 3 cut(s) 223, 454, 455
AsuHPI GGTGA 2 cut(s) 161, 763
AvaI CYCGRG 2 cut(s) 196, 453
AvaII GGWCC 1 cut(s) 569
AxyI CCTNAGG 1 cut(s) 600
BalI TGGCCA 1 cut(s) 719
BbvI GCAGC 2 cut(s) 112, 365
BceAI ACGGC 1 cut(s) 220
BcnI CCSGG 3 cut(s) 223, 454, 455
BcoDI GTCTC 2 cut(s) 83, 610
BfaI CTAG 6 cut(s) 110, 129, 587, 734, 836, 922
BfmI CTRYAG 1 cut(s) 162
BisI GCNGC 2 cut(s) 126, 354
BlsI GCNGC 2 cut(s) 127, 355
BmcAI AGTACT 1 cut(s) 665
Bme1390I CCNGG 3 cut(s) 223, 454, 455
Bme18I GGWCC 1 cut(s) 569
BmeT110I CYCGRG 2 cut(s) 196, 453
BmgT120I GGNCC 2 cut(s) 194, 569
BmrFI CCNGG 3 cut(s) 223, 454, 455
BmrI ACTGGG 1 cut(s) 183
BmsI GCATC 4 cut(s) 126, 145, 791, 907
BmuI ACTGGG 1 cut(s) 183
BpmI CTGGAG 1 cut(s) 602
BpuEI CTTGAG 1 cut(s) 592
BpuMI CCSGG 3 cut(s) 223, 454, 455
Bsa29I ATCGAT 1 cut(s) 23
BsaI GGTCTC 1 cut(s) 610
BsaJI CCNNGG 3 cut(s) 222, 387, 453
BsaXI ACNNNNNCTCC 2 cut(s) 426, 456
Bsc4I CCNNNNNNNGG 3 cut(s) 203, 601, 738
Bse118I RCCGGY 1 cut(s) 521
Bse1I ACTGG 3 cut(s) 22, 189, 272
Bse21I CCTNAGG 1 cut(s) 600
Bse3DI GCAATG 1 cut(s) 314
BseCI ATCGAT 1 cut(s) 23
BseDI CCNNGG 3 cut(s) 222, 387, 453
BseGI GGATG 1 cut(s) 141
BseLI CCNNNNNNNGG 3 cut(s) 203, 601, 738
BseMI GCAATG 1 cut(s) 314
BseMII CTCAG 1 cut(s) 614
BseNI ACTGG 3 cut(s) 22, 189, 272
BseXI GCAGC 2 cut(s) 112, 365
BsgI GTGCAG 1 cut(s) 892
BshFI GGCC 2 cut(s) 195, 719
BshVI ATCGAT 1 cut(s) 23
BsiHKCI CYCGRG 2 cut(s) 196, 453
BsiSI CCGG 3 cut(s) 222, 454, 522
BslFI GGGAC 1 cut(s) 436
BslI CCNNNNNNNGG 3 cut(s) 203, 601, 738
BsmAI GTCTC 2 cut(s) 83, 610
BsmFI GGGAC 1 cut(s) 436
BsmI GAATGC 1 cut(s) 71
BsnI GGCC 2 cut(s) 195, 719
Bso31I GGTCTC 1 cut(s) 610
BsoBI CYCGRG 2 cut(s) 196, 453
Bsp1407I TGTACA 1 cut(s) 426
Bsp143I GATC 4 cut(s) 20, 24, 321, 381
BspANI GGCC 2 cut(s) 195, 719
BspCNI CTCAG 1 cut(s) 613
BspDI ATCGAT 1 cut(s) 23
BspMAI CTGCAG 1 cut(s) 166
BspPI GGATC 2 cut(s) 28, 376
BspTNI GGTCTC 1 cut(s) 610
BsrDI GCAATG 1 cut(s) 314
BsrFI RCCGGY 1 cut(s) 521
BsrGI TGTACA 1 cut(s) 426
BsrI ACTGG 3 cut(s) 22, 189, 272
BssAI RCCGGY 1 cut(s) 521
BssECI CCNNGG 3 cut(s) 222, 387, 453
BssMI GATC 4 cut(s) 20, 24, 321, 381
Bst4CI ACNGT 3 cut(s) 31, 426, 481
BstAUI TGTACA 1 cut(s) 426
BstDEI CTNAG 3 cut(s) 52, 327, 600
BstDSI CCRYGG 1 cut(s) 387
BstF5I GGATG 1 cut(s) 141
BstKTI GATC 4 cut(s) 23, 27, 324, 384
BstMAI GTCTC 2 cut(s) 83, 610
BstMBI GATC 4 cut(s) 20, 24, 321, 381
BstMWI GCNNNNNNNGC 3 cut(s) 362, 455, 626
BstSCI CCNGG 3 cut(s) 221, 452, 453
BstSFI CTRYAG 1 cut(s) 162
BstV1I GCAGC 2 cut(s) 112, 365
BstX2I RGATCY 1 cut(s) 381
BstYI RGATCY 1 cut(s) 381
Bsu15I ATCGAT 1 cut(s) 23
Bsu36I CCTNAGG 1 cut(s) 600
BsuRI GGCC 2 cut(s) 195, 719
BsuTUI ATCGAT 1 cut(s) 23
BtgI CCRYGG 1 cut(s) 387
BtsCI GGATG 1 cut(s) 141
BtsIMutI CAGTG 3 cut(s) 36, 196, 753
Cfr10I RCCGGY 1 cut(s) 521
Cfr13I GGNCC 2 cut(s) 194, 569
Cfr9I CCCGGG 1 cut(s) 453
ClaI ATCGAT 1 cut(s) 23
CseI GACGC 1 cut(s) 438
Csp6I GTAC 3 cut(s) 427, 664, 886
CviAII CATG 3 cut(s) 93, 631, 889
CviQI GTAC 3 cut(s) 427, 664, 886
DdeI CTNAG 3 cut(s) 52, 327, 600
DpnI GATC 4 cut(s) 22, 26, 323, 383
DpnII GATC 4 cut(s) 20, 24, 321, 381
DraIII CACNNNGTG 1 cut(s) 839
EaeI YGGCCR 1 cut(s) 717
Eco31I GGTCTC 1 cut(s) 610
Eco47I GGWCC 1 cut(s) 569
Eco81I CCTNAGG 1 cut(s) 600
Eco88I CYCGRG 2 cut(s) 196, 453
EcoO109I RGGNCCY 1 cut(s) 569
FaeI CATG 3 cut(s) 96, 634, 892
FaqI GGGAC 1 cut(s) 436
FatI CATG 3 cut(s) 92, 630, 888
Fnu4HI GCNGC 2 cut(s) 126, 354
FokI GGATG 1 cut(s) 148
Fsp4HI GCNGC 2 cut(s) 126, 354
FspBI CTAG 6 cut(s) 110, 129, 587, 734, 836, 922
GluI GCNGC 2 cut(s) 126, 354
GsuI CTGGAG 1 cut(s) 602
HaeIII GGCC 2 cut(s) 195, 719
HapII CCGG 3 cut(s) 222, 454, 522
HgaI GACGC 1 cut(s) 438
Hin1II CATG 3 cut(s) 96, 634, 892
HinfI GANTC 6 cut(s) 227, 259, 283, 461, 591, 688
HpaII CCGG 3 cut(s) 222, 454, 522
HphI GGTGA 2 cut(s) 161, 763
Hpy166II GTNNAC 1 cut(s) 484
Hpy188I TCNGA 3 cut(s) 282, 398, 687
Hpy188III TCNNGA 2 cut(s) 298, 581
Hpy8I GTNNAC 1 cut(s) 484
HpyAV CCTTC 2 cut(s) 265, 817
HpyCH4III ACNGT 3 cut(s) 31, 426, 481
HpyCH4V TGCA 7 cut(s) 139, 164, 314, 319, 379, 827, 909
HpyF10VI GCNNNNNNNGC 3 cut(s) 362, 455, 626
HpyF3I CTNAG 3 cut(s) 52, 327, 600
Hsp92II CATG 3 cut(s) 96, 634, 892
Kzo9I GATC 4 cut(s) 20, 24, 321, 381
LmnI GCTCC 1 cut(s) 583
Lsp1109I GCAGC 2 cut(s) 112, 365
LweI GCATC 4 cut(s) 126, 145, 791, 907
MaeI CTAG 6 cut(s) 110, 129, 587, 734, 836, 922
MaeIII GTNAC 1 cut(s) 400
MalI GATC 4 cut(s) 22, 26, 323, 383
MboI GATC 4 cut(s) 20, 24, 321, 381
MboII GAAGA 2 cut(s) 67, 787
MflI RGATCY 1 cut(s) 381
MlsI TGGCCA 1 cut(s) 719
MluCI AATT 4 cut(s) 306, 331, 472, 789
MluNI TGGCCA 1 cut(s) 719
MmeI TCCRAC 2 cut(s) 236, 826
MnlI CCTC 8 cut(s) 115, 192, 235, 406, 548, 609, 655, 680
Mox20I TGGCCA 1 cut(s) 719
MscI TGGCCA 1 cut(s) 719
MseI TTAA 3 cut(s) 38, 420, 873
Msp20I TGGCCA 1 cut(s) 719
MspI CCGG 3 cut(s) 222, 454, 522
MspR9I CCNGG 3 cut(s) 223, 454, 455
Mva1269I GAATGC 1 cut(s) 71
MwoI GCNNNNNNNGC 3 cut(s) 362, 455, 626
NciI CCSGG 3 cut(s) 223, 454, 455
NdeII GATC 4 cut(s) 20, 24, 321, 381
NlaIII CATG 3 cut(s) 96, 634, 892
PctI GAATGC 1 cut(s) 71
PfeI GAWTC 6 cut(s) 227, 259, 283, 461, 591, 688
PkrI GCNGC 2 cut(s) 127, 355
PpuMI RGGWCCY 1 cut(s) 569
PshBI ATTAAT 1 cut(s) 38
PsiI TTATAA 1 cut(s) 305
Psp5II RGGWCCY 1 cut(s) 569
PspPI GGNCC 2 cut(s) 194, 569
PspPPI RGGWCCY 1 cut(s) 569
PstI CTGCAG 1 cut(s) 166
PsuI RGATCY 1 cut(s) 381
RsaI GTAC 3 cut(s) 428, 665, 887
RsaNI GTAC 3 cut(s) 427, 664, 886
SaqAI TTAA 3 cut(s) 38, 420, 873
SatI GCNGC 2 cut(s) 126, 354
Sau3AI GATC 4 cut(s) 20, 24, 321, 381
Sau96I GGNCC 2 cut(s) 194, 569
ScaI AGTACT 1 cut(s) 665
ScrFI CCNGG 3 cut(s) 223, 454, 455
SetI ASST 9 cut(s) 246, 492, 571, 588, 601, 606, 672, 762, 841
SfaNI GCATC 4 cut(s) 126, 145, 791, 907
SfcI CTRYAG 1 cut(s) 162
SinI GGWCC 1 cut(s) 569
SmaI CCCGGG 1 cut(s) 455
SmlI CTYRAG 1 cut(s) 607
SmoI CTYRAG 1 cut(s) 607
Sse9I AATT 4 cut(s) 306, 331, 472, 789
SspMI CTAG 6 cut(s) 110, 129, 587, 734, 836, 922
StyD4I CCNGG 3 cut(s) 221, 452, 453
TaaI ACNGT 3 cut(s) 31, 426, 481
TaqI TCGA 2 cut(s) 23, 411
TasI AATT 4 cut(s) 306, 331, 472, 789
TatI WGTACW 3 cut(s) 426, 663, 885
TfiI GAWTC 6 cut(s) 227, 259, 283, 461, 591, 688
Tru1I TTAA 3 cut(s) 38, 420, 873
Tru9I TTAA 3 cut(s) 38, 420, 873
TscAI CASTG 3 cut(s) 36, 196, 753
TseI GCWGC 2 cut(s) 125, 353
TspDTI ATGAA 2 cut(s) 550, 787
TspGWI ACGGA 1 cut(s) 148
TspMI CCCGGG 1 cut(s) 453
TspRI CASTG 3 cut(s) 36, 196, 753
VpaK11BI GGWCC 1 cut(s) 569
VspI ATTAAT 1 cut(s) 38
XmaI CCCGGG 1 cut(s) 453
XspI CTAG 6 cut(s) 110, 129, 587, 734, 836, 922
ZrmI AGTACT 1 cut(s) 665
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.