26S proteasome non-ATPase regulatory subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G08140 |
| fragaria_vesca | FvH4_2g12221 FvH4_2g12230 FvH4_5g27991 FvH4_5g28290 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_7g05781 |
| rosa_chinensis | RchiOBHm_Chr2g0127201 RchiOBHm_Chr6g0255941 RchiOBHm_Chr6g0255951 RchiOBHm_Chr6g0255961 |
| rosa_laevigata | RLG00000014798 RLG00000018972 |
| rosa_multiflora | Rmu_co8466619.1_g000001 Rmu_sc0001598.1_g000009 Rmu_sc0001598.1_g000013 Rmu_ssc0000018.1_g000063 |
| rosa_roxburghii | Rroxscaffold_2G00116290 Rroxscaffold_5G00361030 |
| rosa_rugosa | Rorug02G0276000 Rorug02G0276100 |
| rosa_samantha | Rh2AG326800 Rh2BG337200 Rh2CG314300 Rh2DG354200 Rh4DG207300 Rh4DG207400 Rh6AG150800 Rh6BG073800 Rh6BG073900 Rh6BG151600 Rh6DG135700 |
| rosa_wichuraiana | Rw2G026510 Rw2G026550 Rw6G006970 Rw6G007010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 293, 2491 |
| AccI | GTMKAC | 1 cut(s) | 2442 |
| AciI | CCGC | 6 cut(s) | 30, 36, 42, 68, 71, 1814 |
| AclWI | GGATC | 4 cut(s) | 8, 173, 179, 1427 |
| AcoI | YGGCCR | 4 cut(s) | 1066, 1852, 2482, 2503 |
| AcsI | RAATTY | 3 cut(s) | 228, 661, 761 |
| AcuI | CTGAAG | 4 cut(s) | 411, 1056, 1764, 1953 |
| AcyI | GRCGYC | 1 cut(s) | 1533 |
| AdeI | CACNNNGTG | 1 cut(s) | 2324 |
| AfaI | GTAC | 5 cut(s) | 235, 552, 1267, 1316, 1709 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 188, 189, 293, 613, 2092, 2476, 2491 |
| AgsI | TTSAA | 8 cut(s) | 142, 176, 767, 1222, 1752, 1841, 2627, 2644 |
| AhlI | ACTAGT | 2 cut(s) | 242, 547 |
| AjnI | CCWGG | 3 cut(s) | 709, 1890, 2505 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 134, 166 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1983, 2015 |
| Alw26I | GTCTC | 3 cut(s) | 515, 683, 2033 |
| AlwI | GGATC | 4 cut(s) | 8, 173, 179, 1427 |
| Ama87I | CYCGRG | 2 cut(s) | 188, 1189 |
| AoxI | GGCC | 9 cut(s) | 135, 454, 1023, 1066, 1734, 1852, 1894, 2482, 2503 |
| ApaI | GGGCCC | 1 cut(s) | 1898 |
| ApoI | RAATTY | 3 cut(s) | 228, 661, 761 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1987, 2019 |
| AspA2I | CCTAGG | 1 cut(s) | 1696 |
| AspS9I | GGNCC | 5 cut(s) | 454, 713, 1642, 1894, 1895 |
| AsuC2I | CCSGG | 4 cut(s) | 189, 190, 1070, 1294 |
| AsuHPI | GGTGA | 5 cut(s) | 449, 679, 1892, 2047, 2301 |
| AsuNHI | GCTAGC | 1 cut(s) | 2587 |
| AvaI | CYCGRG | 2 cut(s) | 188, 1189 |
| AvaII | GGWCC | 2 cut(s) | 713, 1642 |
| AvrII | CCTAGG | 1 cut(s) | 1696 |
| AxyI | CCTNAGG | 1 cut(s) | 2128 |
| BaeGI | GKGCMC | 1 cut(s) | 1898 |
| BalI | TGGCCA | 2 cut(s) | 1854, 2505 |
| BanII | GRGCYC | 3 cut(s) | 60, 1671, 1898 |
| BauI | CACGAG | 1 cut(s) | 1002 |
| BbsI | GAAGAC | 3 cut(s) | 630, 1247, 1694 |
| BccI | CCATC | 7 cut(s) | 428, 913, 1058, 1186, 1444, 1945, 2375 |
| BceAI | ACGGC | 1 cut(s) | 2443 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 212, 246, 2413, 2447 |
| BciT130I | CCWGG | 3 cut(s) | 711, 1892, 2507 |
| BciVI | GTATCC | 1 cut(s) | 783 |
| BcnI | CCSGG | 4 cut(s) | 189, 190, 1070, 1294 |
| BcoDI | GTCTC | 3 cut(s) | 515, 683, 2033 |
| BcuI | ACTAGT | 2 cut(s) | 242, 547 |
| BfaI | CTAG | 6 cut(s) | 243, 548, 1086, 1466, 1697, 2588 |
| BfmI | CTRYAG | 4 cut(s) | 785, 1251, 1979, 2439 |
| BfuI | GTATCC | 1 cut(s) | 783 |
| BlnI | CCTAGG | 1 cut(s) | 1696 |
| BlpI | GCTNAGC | 1 cut(s) | 2583 |
| BmcAI | AGTACT | 1 cut(s) | 1316 |
| Bme1390I | CCNGG | 7 cut(s) | 189, 190, 711, 1070, 1294, 1892, 2507 |
| Bme18I | GGWCC | 2 cut(s) | 713, 1642 |
| BmeT110I | CYCGRG | 2 cut(s) | 188, 1189 |
| BmgT120I | GGNCC | 5 cut(s) | 454, 713, 1642, 1894, 1895 |
| BmiI | GGNNCC | 4 cut(s) | 455, 1668, 1896, 2149 |
| BmrFI | CCNGG | 7 cut(s) | 189, 190, 711, 1070, 1294, 1892, 2507 |
| BmsI | GCATC | 5 cut(s) | 14, 1174, 1211, 1981, 2197 |
| BmtI | GCTAGC | 1 cut(s) | 2591 |
| BpiI | GAAGAC | 3 cut(s) | 630, 1247, 1694 |
| BpmI | CTGGAG | 1 cut(s) | 501 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1617 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2583 |
| BpuEI | CTTGAG | 7 cut(s) | 230, 477, 1817, 1892, 1967, 2173, 2223 |
| BpuMI | CCSGG | 4 cut(s) | 189, 190, 1070, 1294 |
| BsaAI | YACGTR | 1 cut(s) | 1505 |
| BsaBI | GATNNNNATC | 1 cut(s) | 183 |
| BsaHI | GRCGYC | 1 cut(s) | 1533 |
| BsaI | GGTCTC | 2 cut(s) | 515, 2033 |
| BsaJI | CCNNGG | 5 cut(s) | 188, 1575, 1696, 1711, 1891 |
| BsaWI | WCCGGW | 1 cut(s) | 592 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 188, 189, 293, 613, 2092, 2476, 2491 |
| Bse118I | RCCGGY | 2 cut(s) | 2311, 2570 |
| Bse1I | ACTGG | 6 cut(s) | 690, 1217, 1245, 1404, 2536, 2555 |
| Bse21I | CCTNAGG | 1 cut(s) | 2128 |
| Bse3DI | GCAATG | 5 cut(s) | 947, 1333, 1609, 1932, 2421 |
| Bse8I | GATNNNNATC | 1 cut(s) | 183 |
| BseBI | CCWGG | 3 cut(s) | 711, 1892, 2507 |
| BseDI | CCNNGG | 5 cut(s) | 188, 1575, 1696, 1711, 1891 |
| BseGI | GGATG | 4 cut(s) | 876, 1288, 2212, 2500 |
| BseJI | GATNNNNATC | 1 cut(s) | 183 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 188, 189, 293, 613, 2092, 2476, 2491 |
| BseMI | GCAATG | 5 cut(s) | 947, 1333, 1609, 1932, 2421 |
| BseMII | CTCAG | 8 cut(s) | 270, 991, 1479, 1631, 1647, 1705, 2574, 2586 |
| BseNI | ACTGG | 6 cut(s) | 690, 1217, 1245, 1404, 2536, 2555 |
| BseRI | GAGGAG | 1 cut(s) | 1622 |
| BseSI | GKGCMC | 1 cut(s) | 1898 |
| BshFI | GGCC | 9 cut(s) | 137, 456, 1025, 1068, 1736, 1854, 1896, 2484, 2505 |
| BsiHKCI | CYCGRG | 2 cut(s) | 188, 1189 |
| BsiSI | CCGG | 6 cut(s) | 189, 593, 1069, 1293, 2312, 2571 |
| BslFI | GGGAC | 4 cut(s) | 1160, 1956, 2453, 2502 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 188, 189, 293, 613, 2092, 2476, 2491 |
| BsmAI | GTCTC | 3 cut(s) | 515, 683, 2033 |
| BsmFI | GGGAC | 4 cut(s) | 1160, 1956, 2453, 2502 |
| BsmI | GAATGC | 1 cut(s) | 743 |
| BsnI | GGCC | 9 cut(s) | 137, 456, 1025, 1068, 1736, 1854, 1896, 2484, 2505 |
| Bso31I | GGTCTC | 2 cut(s) | 515, 2033 |
| BsoBI | CYCGRG | 2 cut(s) | 188, 1189 |
| Bsp120I | GGGCCC | 1 cut(s) | 1894 |
| Bsp1286I | GDGCHC | 3 cut(s) | 60, 1671, 1898 |
| Bsp143I | GATC | 8 cut(s) | 13, 178, 184, 535, 631, 847, 1432, 2293 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2583 |
| BspACI | CCGC | 6 cut(s) | 30, 36, 42, 68, 71, 1814 |
| BspANI | GGCC | 9 cut(s) | 137, 456, 1025, 1068, 1736, 1854, 1896, 2484, 2505 |
| BspCNI | CTCAG | 8 cut(s) | 269, 990, 1480, 1630, 1648, 1704, 2575, 2587 |
| BspHI | TCATGA | 2 cut(s) | 747, 1762 |
| BspLI | GGNNCC | 4 cut(s) | 455, 1668, 1896, 2149 |
| BspMAI | CTGCAG | 2 cut(s) | 789, 1255 |
| BspOI | GCTAGC | 1 cut(s) | 2591 |
| BspPI | GGATC | 4 cut(s) | 8, 173, 179, 1427 |
| BspTNI | GGTCTC | 2 cut(s) | 515, 2033 |
| BsrDI | GCAATG | 5 cut(s) | 947, 1333, 1609, 1932, 2421 |
| BsrFI | RCCGGY | 2 cut(s) | 2311, 2570 |
| BsrI | ACTGG | 6 cut(s) | 690, 1217, 1245, 1404, 2536, 2555 |
| BssAI | RCCGGY | 2 cut(s) | 2311, 2570 |
| BssECI | CCNNGG | 5 cut(s) | 188, 1575, 1696, 1711, 1891 |
| BssMI | GATC | 8 cut(s) | 13, 178, 184, 535, 631, 847, 1432, 2293 |
| BssNI | GRCGYC | 1 cut(s) | 1533 |
| BssSI | CACGAG | 1 cut(s) | 1002 |
| BssT1I | CCWWGG | 3 cut(s) | 1575, 1696, 1711 |
| Bst2BI | CACGAG | 1 cut(s) | 1002 |
| Bst2UI | CCWGG | 3 cut(s) | 711, 1892, 2507 |
| Bst4CI | ACNGT | 5 cut(s) | 1174, 1278, 1983, 2059, 2440 |
| Bst6I | CTCTTC | 4 cut(s) | 762, 1929, 2225, 2661 |
| BstACI | GRCGYC | 1 cut(s) | 1533 |
| BstBAI | YACGTR | 1 cut(s) | 1505 |
| BstC8I | GCNNGC | 9 cut(s) | 34, 47, 1147, 1299, 1678, 2212, 2346, 2572, 2589 |
| BstEII | GGTNACC | 1 cut(s) | 2053 |
| BstF5I | GGATG | 4 cut(s) | 876, 1288, 2212, 2500 |
| BstKTI | GATC | 8 cut(s) | 16, 181, 187, 538, 634, 850, 1435, 2296 |
| BstMAI | GTCTC | 3 cut(s) | 515, 683, 2033 |
| BstMBI | GATC | 8 cut(s) | 13, 178, 184, 535, 631, 847, 1432, 2293 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 42, 55, 64, 862, 1922, 2082, 2165, 2588 |
| BstNI | CCWGG | 3 cut(s) | 711, 1892, 2507 |
| BstNSI | RCATGY | 3 cut(s) | 650, 2348, 2352 |
| BstPI | GGTNACC | 1 cut(s) | 2053 |
| BstSCI | CCNGG | 7 cut(s) | 187, 188, 709, 1068, 1292, 1890, 2505 |
| BstSFI | CTRYAG | 4 cut(s) | 785, 1251, 1979, 2439 |
| BstSLI | GKGCMC | 1 cut(s) | 1898 |
| BstSNI | TACGTA | 1 cut(s) | 1505 |
| BstV2I | GAAGAC | 3 cut(s) | 630, 1247, 1694 |
| BstX2I | RGATCY | 3 cut(s) | 13, 178, 1432 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2374 |
| BstYI | RGATCY | 3 cut(s) | 13, 178, 1432 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2128 |
| BsuI | GTATCC | 1 cut(s) | 783 |
| BsuRI | GGCC | 9 cut(s) | 137, 456, 1025, 1068, 1736, 1854, 1896, 2484, 2505 |
| BtgZI | GCGATG | 1 cut(s) | 1931 |
| BtsCI | GGATG | 4 cut(s) | 876, 1288, 2212, 2500 |
| BtsI | GCAGTG | 1 cut(s) | 782 |
| BtsIMutI | CAGTG | 4 cut(s) | 782, 985, 1252, 1397 |
| Cac8I | GCNNGC | 9 cut(s) | 34, 47, 1147, 1299, 1678, 2212, 2346, 2572, 2589 |
| CciI | TCATGA | 2 cut(s) | 747, 1762 |
| Cfr10I | RCCGGY | 2 cut(s) | 2311, 2570 |
| Cfr13I | GGNCC | 5 cut(s) | 454, 713, 1642, 1894, 1895 |
| Cfr9I | CCCGGG | 1 cut(s) | 188 |
| CseI | GACGC | 2 cut(s) | 1541, 1661 |
| Csp6I | GTAC | 5 cut(s) | 234, 551, 1266, 1315, 1708 |
| CviQI | GTAC | 5 cut(s) | 234, 551, 1266, 1315, 1708 |
| DpnI | GATC | 8 cut(s) | 15, 180, 186, 537, 633, 849, 1434, 2295 |
| DpnII | GATC | 8 cut(s) | 13, 178, 184, 535, 631, 847, 1432, 2293 |
| DraIII | CACNNNGTG | 1 cut(s) | 2324 |
| EaeI | YGGCCR | 4 cut(s) | 1066, 1852, 2482, 2503 |
| Eam1104I | CTCTTC | 4 cut(s) | 762, 1929, 2225, 2661 |
| EarI | CTCTTC | 4 cut(s) | 762, 1929, 2225, 2661 |
| Eco105I | TACGTA | 1 cut(s) | 1505 |
| Eco130I | CCWWGG | 3 cut(s) | 1575, 1696, 1711 |
| Eco24I | GRGCYC | 3 cut(s) | 60, 1671, 1898 |
| Eco31I | GGTCTC | 2 cut(s) | 515, 2033 |
| Eco47I | GGWCC | 2 cut(s) | 713, 1642 |
| Eco57I | CTGAAG | 4 cut(s) | 411, 1056, 1764, 1953 |
| Eco81I | CCTNAGG | 1 cut(s) | 2128 |
| Eco88I | CYCGRG | 2 cut(s) | 188, 1189 |
| Eco91I | GGTNACC | 1 cut(s) | 2053 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1894, 1895 |
| EcoO65I | GGTNACC | 1 cut(s) | 2053 |
| EcoRII | CCWGG | 3 cut(s) | 709, 1890, 2505 |
| EcoT14I | CCWWGG | 3 cut(s) | 1575, 1696, 1711 |
| EcoT22I | ATGCAT | 2 cut(s) | 1135, 2350 |
| EcoT38I | GRGCYC | 3 cut(s) | 60, 1671, 1898 |
| ErhI | CCWWGG | 3 cut(s) | 1575, 1696, 1711 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 815, 847, 975, 1007, 1040, 1072, 1530, 1562 |
| FaqI | GGGAC | 4 cut(s) | 1160, 1956, 2453, 2502 |
| FauI | CCCGC | 1 cut(s) | 1807 |
| FauNDI | CATATG | 1 cut(s) | 1477 |
| FblI | GTMKAC | 1 cut(s) | 2442 |
| FokI | GGATG | 4 cut(s) | 863, 1295, 2219, 2507 |
| FriOI | GRGCYC | 3 cut(s) | 60, 1671, 1898 |
| FspBI | CTAG | 6 cut(s) | 243, 548, 1086, 1466, 1697, 2588 |
| GsuI | CTGGAG | 1 cut(s) | 501 |
| HaeIII | GGCC | 9 cut(s) | 137, 456, 1025, 1068, 1736, 1854, 1896, 2484, 2505 |
| HapII | CCGG | 6 cut(s) | 189, 593, 1069, 1293, 2312, 2571 |
| HgaI | GACGC | 2 cut(s) | 1541, 1661 |
| Hin1I | GRCGYC | 1 cut(s) | 1533 |
| HincII | GTYRAC | 2 cut(s) | 604, 1288 |
| HindII | GTYRAC | 2 cut(s) | 604, 1288 |
| HindIII | AAGCTT | 1 cut(s) | 406 |
| HpaII | CCGG | 6 cut(s) | 189, 593, 1069, 1293, 2312, 2571 |
| HphI | GGTGA | 5 cut(s) | 449, 679, 1892, 2047, 2301 |
| Hpy166II | GTNNAC | 4 cut(s) | 604, 1288, 1862, 2443 |
| Hpy8I | GTNNAC | 4 cut(s) | 604, 1288, 1862, 2443 |
| Hpy99I | CGWCG | 1 cut(s) | 2007 |
| HpyAV | CCTTC | 8 cut(s) | 100, 193, 386, 716, 977, 1856, 1870, 2621 |
| HpyCH4III | ACNGT | 5 cut(s) | 1174, 1278, 1983, 2059, 2440 |
| HpyCH4IV | ACGT | 1 cut(s) | 1504 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 42, 55, 64, 862, 1922, 2082, 2165, 2588 |
| HpySE526I | ACGT | 1 cut(s) | 1504 |
| Hsp92I | GRCGYC | 1 cut(s) | 1533 |
| KroI | GCCGGC | 1 cut(s) | 2570 |
| KroNI | GCCGGC | 1 cut(s) | 2572 |
| Kzo9I | GATC | 8 cut(s) | 13, 178, 184, 535, 631, 847, 1432, 2293 |
| LmnI | GCTCC | 4 cut(s) | 1231, 1546, 1666, 1969 |
| LweI | GCATC | 5 cut(s) | 14, 1174, 1211, 1981, 2197 |
| MaeI | CTAG | 6 cut(s) | 243, 548, 1086, 1466, 1697, 2588 |
| MaeII | ACGT | 1 cut(s) | 1504 |
| MaeIII | GTNAC | 3 cut(s) | 872, 1649, 2053 |
| MalI | GATC | 8 cut(s) | 15, 180, 186, 537, 633, 849, 1434, 2295 |
| MboI | GATC | 8 cut(s) | 13, 178, 184, 535, 631, 847, 1432, 2293 |
| MfeI | CAATTG | 2 cut(s) | 149, 1375 |
| MflI | RGATCY | 3 cut(s) | 13, 178, 1432 |
| MhlI | GDGCHC | 3 cut(s) | 60, 1671, 1898 |
| MlsI | TGGCCA | 2 cut(s) | 1854, 2505 |
| MluNI | TGGCCA | 2 cut(s) | 1854, 2505 |
| MlyI | GAGTC | 4 cut(s) | 1283, 1510, 1786, 2266 |
| Mox20I | TGGCCA | 2 cut(s) | 1854, 2505 |
| Mph1103I | ATGCAT | 2 cut(s) | 1135, 2350 |
| MroNI | GCCGGC | 1 cut(s) | 2570 |
| MscI | TGGCCA | 2 cut(s) | 1854, 2505 |
| MseI | TTAA | 7 cut(s) | 272, 410, 611, 666, 909, 1128, 2072 |
| MslI | CAYNNNNRTG | 4 cut(s) | 462, 1326, 2060, 2336 |
| Msp20I | TGGCCA | 2 cut(s) | 1854, 2505 |
| MspA1I | CMGCKG | 2 cut(s) | 42, 1742 |
| MspI | CCGG | 6 cut(s) | 189, 593, 1069, 1293, 2312, 2571 |
| MspR9I | CCNGG | 7 cut(s) | 189, 190, 711, 1070, 1294, 1892, 2507 |
| MunI | CAATTG | 2 cut(s) | 149, 1375 |
| Mva1269I | GAATGC | 1 cut(s) | 743 |
| MvaI | CCWGG | 3 cut(s) | 711, 1892, 2507 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 42, 55, 64, 862, 1922, 2082, 2165, 2588 |
| NaeI | GCCGGC | 1 cut(s) | 2572 |
| NciI | CCSGG | 4 cut(s) | 189, 190, 1070, 1294 |
| NdeI | CATATG | 1 cut(s) | 1477 |
| NdeII | GATC | 8 cut(s) | 13, 178, 184, 535, 631, 847, 1432, 2293 |
| NgoMIV | GCCGGC | 1 cut(s) | 2570 |
| NheI | GCTAGC | 1 cut(s) | 2587 |
| NlaIV | GGNNCC | 4 cut(s) | 455, 1668, 1896, 2149 |
| NmeAIII | GCCGAG | 1 cut(s) | 2448 |
| NmuCI | GTSAC | 2 cut(s) | 1649, 2053 |
| NsiI | ATGCAT | 2 cut(s) | 1135, 2350 |
| NspI | RCATGY | 3 cut(s) | 650, 2348, 2352 |
| PaeI | GCATGC | 1 cut(s) | 2348 |
| PaeR7I | CTCGAG | 1 cut(s) | 1189 |
| PagI | TCATGA | 2 cut(s) | 747, 1762 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 14 |
| PctI | GAATGC | 1 cut(s) | 743 |
| PdiI | GCCGGC | 1 cut(s) | 2572 |
| PfeI | GAWTC | 6 cut(s) | 83, 329, 1094, 2096, 2328, 2449 |
| PflFI | GACNNNGTC | 1 cut(s) | 382 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 293, 2491 |
| PfoI | TCCNGGA | 1 cut(s) | 709 |
| PleI | GAGTC | 4 cut(s) | 1283, 1510, 1786, 2266 |
| PpsI | GAGTC | 4 cut(s) | 1283, 1510, 1786, 2266 |
| Ppu21I | YACGTR | 1 cut(s) | 1505 |
| Psp6I | CCWGG | 3 cut(s) | 709, 1890, 2505 |
| PspEI | GGTNACC | 1 cut(s) | 2053 |
| PspGI | CCWGG | 3 cut(s) | 709, 1890, 2505 |
| PspN4I | GGNNCC | 4 cut(s) | 455, 1668, 1896, 2149 |
| PspOMI | GGGCCC | 1 cut(s) | 1894 |
| PspPI | GGNCC | 5 cut(s) | 454, 713, 1642, 1894, 1895 |
| PspXI | VCTCGAGB | 1 cut(s) | 1189 |
| PstI | CTGCAG | 2 cut(s) | 789, 1255 |
| PsuI | RGATCY | 3 cut(s) | 13, 178, 1432 |
| PsyI | GACNNNGTC | 1 cut(s) | 382 |
| PvuII | CAGCTG | 1 cut(s) | 1742 |
| RsaI | GTAC | 5 cut(s) | 235, 552, 1267, 1316, 1709 |
| RsaNI | GTAC | 5 cut(s) | 234, 551, 1266, 1315, 1708 |
| RseI | CAYNNNNRTG | 4 cut(s) | 462, 1326, 2060, 2336 |
| SaqAI | TTAA | 7 cut(s) | 272, 410, 611, 666, 909, 1128, 2072 |
| Sau3AI | GATC | 8 cut(s) | 13, 178, 184, 535, 631, 847, 1432, 2293 |
| Sau96I | GGNCC | 5 cut(s) | 454, 713, 1642, 1894, 1895 |
| ScaI | AGTACT | 1 cut(s) | 1316 |
| SchI | GAGTC | 4 cut(s) | 1283, 1510, 1786, 2266 |
| ScrFI | CCNGG | 7 cut(s) | 189, 190, 711, 1070, 1294, 1892, 2507 |
| SduI | GDGCHC | 3 cut(s) | 60, 1671, 1898 |
| SfaNI | GCATC | 5 cut(s) | 14, 1174, 1211, 1981, 2197 |
| SfcI | CTRYAG | 4 cut(s) | 785, 1251, 1979, 2439 |
| Sfr274I | CTCGAG | 1 cut(s) | 1189 |
| SinI | GGWCC | 2 cut(s) | 713, 1642 |
| SlaI | CTCGAG | 1 cut(s) | 1189 |
| SmaI | CCCGGG | 1 cut(s) | 190 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 462, 1326, 2060, 2336 |
| SmlI | CTYRAG | 8 cut(s) | 209, 492, 1189, 1832, 1871, 1946, 2188, 2238 |
| SmoI | CTYRAG | 8 cut(s) | 209, 492, 1189, 1832, 1871, 1946, 2188, 2238 |
| SnaBI | TACGTA | 1 cut(s) | 1505 |
| SpeI | ACTAGT | 2 cut(s) | 242, 547 |
| SphI | GCATGC | 1 cut(s) | 2348 |
| SsiI | CCGC | 6 cut(s) | 30, 36, 42, 68, 71, 1814 |
| SspMI | CTAG | 6 cut(s) | 243, 548, 1086, 1466, 1697, 2588 |
| StyD4I | CCNGG | 7 cut(s) | 187, 188, 709, 1068, 1292, 1890, 2505 |
| StyI | CCWWGG | 3 cut(s) | 1575, 1696, 1711 |
| TaaI | ACNGT | 5 cut(s) | 1174, 1278, 1983, 2059, 2440 |
| TaiI | ACGT | 1 cut(s) | 1507 |
| TaqI | TCGA | 2 cut(s) | 804, 1190 |
| TaqII | GACCGA | 1 cut(s) | 1659 |
| TatI | WGTACW | 2 cut(s) | 550, 1314 |
| TauI | GCSGC | 5 cut(s) | 32, 39, 45, 70, 73 |
| TfiI | GAWTC | 6 cut(s) | 83, 329, 1094, 2096, 2328, 2449 |
| Tru1I | TTAA | 7 cut(s) | 272, 410, 611, 666, 909, 1128, 2072 |
| Tru9I | TTAA | 7 cut(s) | 272, 410, 611, 666, 909, 1128, 2072 |
| TscAI | CASTG | 4 cut(s) | 789, 985, 1252, 1404 |
| TseFI | GTSAC | 2 cut(s) | 1649, 2053 |
| Tsp45I | GTSAC | 2 cut(s) | 1649, 2053 |
| TspGWI | ACGGA | 2 cut(s) | 1991, 2108 |
| TspMI | CCCGGG | 1 cut(s) | 188 |
| TspRI | CASTG | 4 cut(s) | 789, 985, 1252, 1404 |
| Tth111I | GACNNNGTC | 1 cut(s) | 382 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 293, 2491 |
| VpaK11BI | GGWCC | 2 cut(s) | 713, 1642 |
| XapI | RAATTY | 3 cut(s) | 228, 661, 761 |
| XceI | RCATGY | 3 cut(s) | 650, 2348, 2352 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1343 |
| XhoI | CTCGAG | 1 cut(s) | 1189 |
| XmaI | CCCGGG | 1 cut(s) | 188 |
| XmaJI | CCTAGG | 1 cut(s) | 1696 |
| XmiI | GTMKAC | 1 cut(s) | 2442 |
| XspI | CTAG | 6 cut(s) | 243, 548, 1086, 1466, 1697, 2588 |
| ZrmI | AGTACT | 1 cut(s) | 1316 |
| Zsp2I | ATGCAT | 2 cut(s) | 1135, 2350 |