26S proteasome non-ATPase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G08140 |
| fragaria_vesca | FvH4_2g12221 FvH4_2g12230 FvH4_5g27991 FvH4_5g28290 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_6g26640 FvH4_7g05781 |
| rosa_chinensis | RchiOBHm_Chr2g0127201 RchiOBHm_Chr6g0255941 RchiOBHm_Chr6g0255951 RchiOBHm_Chr6g0255961 |
| rosa_laevigata | RLG00000014798 RLG00000018972 |
| rosa_multiflora | Rmu_co8466619.1_g000001 Rmu_sc0001598.1_g000009 Rmu_sc0001598.1_g000013 Rmu_ssc0000018.1_g000063 |
| rosa_roxburghii | Rroxscaffold_2G00116290 Rroxscaffold_5G00361030 |
| rosa_rugosa | Rorug02G0276000 Rorug02G0276100 |
| rosa_samantha | Rh2AG326800 Rh2BG337200 Rh2CG314300 Rh2DG354200 Rh4DG207300 Rh4DG207400 Rh6AG150800 Rh6BG073800 Rh6BG073900 Rh6BG151600 Rh6DG135700 |
| rosa_wichuraiana | Rw2G026510 Rw2G026550 Rw6G006970 Rw6G007010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 470 |
| AcsI | RAATTY | 1 cut(s) | 82 |
| AcuI | CTGAAG | 1 cut(s) | 32 |
| AfaI | GTAC | 1 cut(s) | 23 |
| AjnI | CCWGG | 1 cut(s) | 134 |
| AluBI | AGCT | 3 cut(s) | 62, 307, 346 |
| AluI | AGCT | 3 cut(s) | 62, 307, 346 |
| Alw21I | GWGCWC | 1 cut(s) | 348 |
| Ama87I | CYCGRG | 1 cut(s) | 333 |
| AoxI | GGCC | 1 cut(s) | 354 |
| ApoI | RAATTY | 1 cut(s) | 82 |
| AseI | ATTAAT | 1 cut(s) | 294 |
| AsuHPI | GGTGA | 3 cut(s) | 38, 100, 301 |
| AvaI | CYCGRG | 1 cut(s) | 333 |
| BanII | GRGCYC | 1 cut(s) | 348 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 37 |
| BbsI | GAAGAC | 1 cut(s) | 98 |
| Bbv12I | GWGCWC | 1 cut(s) | 348 |
| BccI | CCATC | 1 cut(s) | 248 |
| BciT130I | CCWGG | 1 cut(s) | 136 |
| BglII | AGATCT | 1 cut(s) | 337 |
| BlpI | GCTNAGC | 1 cut(s) | 63 |
| Bme1390I | CCNGG | 1 cut(s) | 136 |
| BmeT110I | CYCGRG | 1 cut(s) | 333 |
| BmrFI | CCNGG | 1 cut(s) | 136 |
| BpiI | GAAGAC | 1 cut(s) | 98 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 63 |
| BpuEI | CTTGAG | 2 cut(s) | 362, 413 |
| Bse1I | ACTGG | 1 cut(s) | 111 |
| BseBI | CCWGG | 1 cut(s) | 136 |
| BseGI | GGATG | 1 cut(s) | 259 |
| BseMII | CTCAG | 1 cut(s) | 54 |
| BseNI | ACTGG | 1 cut(s) | 111 |
| BshFI | GGCC | 1 cut(s) | 356 |
| BsiHKAI | GWGCWC | 1 cut(s) | 348 |
| BsiHKCI | CYCGRG | 1 cut(s) | 333 |
| BsnI | GGCC | 1 cut(s) | 356 |
| BsoBI | CYCGRG | 1 cut(s) | 333 |
| Bsp1286I | GDGCHC | 1 cut(s) | 348 |
| Bsp143I | GATC | 2 cut(s) | 43, 337 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 63 |
| BspACI | CCGC | 1 cut(s) | 470 |
| BspANI | GGCC | 1 cut(s) | 356 |
| BspCNI | CTCAG | 1 cut(s) | 55 |
| BsrI | ACTGG | 1 cut(s) | 111 |
| BssMI | GATC | 2 cut(s) | 43, 337 |
| Bst2UI | CCWGG | 1 cut(s) | 136 |
| BstC8I | GCNNGC | 1 cut(s) | 192 |
| BstDEI | CTNAG | 2 cut(s) | 63, 303 |
| BstF5I | GGATG | 1 cut(s) | 259 |
| BstKTI | GATC | 2 cut(s) | 46, 340 |
| BstMBI | GATC | 2 cut(s) | 43, 337 |
| BstNI | CCWGG | 1 cut(s) | 136 |
| BstNSI | RCATGY | 2 cut(s) | 71, 190 |
| BstSCI | CCNGG | 1 cut(s) | 134 |
| BstV2I | GAAGAC | 1 cut(s) | 98 |
| BstX2I | RGATCY | 1 cut(s) | 337 |
| BstYI | RGATCY | 1 cut(s) | 337 |
| BsuRI | GGCC | 1 cut(s) | 356 |
| BtsCI | GGATG | 1 cut(s) | 259 |
| BtsIMutI | CAGTG | 1 cut(s) | 429 |
| Cac8I | GCNNGC | 1 cut(s) | 192 |
| Csp6I | GTAC | 1 cut(s) | 22 |
| CviAII | CATG | 4 cut(s) | 68, 187, 200, 349 |
| CviJI | RGCY | 5 cut(s) | 62, 307, 346, 356, 440 |
| CviKI_1 | RGCY | 5 cut(s) | 62, 307, 346, 356, 440 |
| CviQI | GTAC | 1 cut(s) | 22 |
| DdeI | CTNAG | 2 cut(s) | 63, 303 |
| DpnI | GATC | 2 cut(s) | 45, 339 |
| DpnII | GATC | 2 cut(s) | 43, 337 |
| Ecl136II | GAGCTC | 1 cut(s) | 346 |
| Eco24I | GRGCYC | 1 cut(s) | 348 |
| Eco53kI | GAGCTC | 1 cut(s) | 346 |
| Eco57I | CTGAAG | 1 cut(s) | 32 |
| Eco88I | CYCGRG | 1 cut(s) | 333 |
| EcoICRI | GAGCTC | 1 cut(s) | 346 |
| EcoRII | CCWGG | 1 cut(s) | 134 |
| EcoT22I | ATGCAT | 1 cut(s) | 460 |
| EcoT38I | GRGCYC | 1 cut(s) | 348 |
| FaeI | CATG | 4 cut(s) | 71, 190, 203, 352 |
| FaiI | YATR | 6 cut(s) | 69, 188, 201, 350, 374, 376 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 371, 403 |
| FatI | CATG | 4 cut(s) | 67, 186, 199, 348 |
| FauI | CCCGC | 1 cut(s) | 463 |
| FokI | GGATG | 1 cut(s) | 266 |
| FriOI | GRGCYC | 1 cut(s) | 348 |
| HaeIII | GGCC | 1 cut(s) | 356 |
| Hin1II | CATG | 4 cut(s) | 71, 190, 203, 352 |
| HincII | GTYRAC | 1 cut(s) | 247 |
| HindII | GTYRAC | 1 cut(s) | 247 |
| HpaI | GTTAAC | 1 cut(s) | 247 |
| HphI | GGTGA | 3 cut(s) | 38, 100, 301 |
| Hpy166II | GTNNAC | 1 cut(s) | 247 |
| Hpy188III | TCNNGA | 2 cut(s) | 335, 341 |
| Hpy8I | GTNNAC | 1 cut(s) | 247 |
| HpyAV | CCTTC | 1 cut(s) | 137 |
| HpyCH4IV | ACGT | 1 cut(s) | 249 |
| HpyCH4V | TGCA | 3 cut(s) | 283, 427, 458 |
| HpyF3I | CTNAG | 2 cut(s) | 63, 303 |
| HpySE526I | ACGT | 1 cut(s) | 249 |
| Hsp92II | CATG | 4 cut(s) | 71, 190, 203, 352 |
| KspAI | GTTAAC | 1 cut(s) | 247 |
| Kzo9I | GATC | 2 cut(s) | 43, 337 |
| LpnPI | CCDG | 7 cut(s) | 38, 121, 124, 144, 148, 269, 353 |
| MaeII | ACGT | 1 cut(s) | 249 |
| MaeIII | GTNAC | 1 cut(s) | 322 |
| MalI | GATC | 2 cut(s) | 45, 339 |
| MboI | GATC | 2 cut(s) | 43, 337 |
| MboII | GAAGA | 1 cut(s) | 103 |
| MflI | RGATCY | 1 cut(s) | 337 |
| MhlI | GDGCHC | 1 cut(s) | 348 |
| MluCI | AATT | 2 cut(s) | 82, 208 |
| MnlI | CCTC | 4 cut(s) | 268, 338, 346, 388 |
| Mph1103I | ATGCAT | 1 cut(s) | 460 |
| MseI | TTAA | 5 cut(s) | 51, 87, 246, 294, 453 |
| MspR9I | CCNGG | 1 cut(s) | 136 |
| MvaI | CCWGG | 1 cut(s) | 136 |
| NdeII | GATC | 2 cut(s) | 43, 337 |
| NlaIII | CATG | 4 cut(s) | 71, 190, 203, 352 |
| NsiI | ATGCAT | 1 cut(s) | 460 |
| NspI | RCATGY | 2 cut(s) | 71, 190 |
| PaeR7I | CTCGAG | 1 cut(s) | 333 |
| PshBI | ATTAAT | 1 cut(s) | 294 |
| Psp124BI | GAGCTC | 1 cut(s) | 348 |
| Psp6I | CCWGG | 1 cut(s) | 134 |
| PspGI | CCWGG | 1 cut(s) | 134 |
| PsuI | RGATCY | 1 cut(s) | 337 |
| RsaI | GTAC | 1 cut(s) | 23 |
| RsaNI | GTAC | 1 cut(s) | 22 |
| SacI | GAGCTC | 1 cut(s) | 348 |
| SaqAI | TTAA | 5 cut(s) | 51, 87, 246, 294, 453 |
| Sau3AI | GATC | 2 cut(s) | 43, 337 |
| ScrFI | CCNGG | 1 cut(s) | 136 |
| SduI | GDGCHC | 1 cut(s) | 348 |
| SetI | ASST | 9 cut(s) | 27, 51, 64, 129, 252, 279, 309, 319, 348 |
| Sfr274I | CTCGAG | 1 cut(s) | 333 |
| SlaI | CTCGAG | 1 cut(s) | 333 |
| SmlI | CTYRAG | 3 cut(s) | 333, 341, 392 |
| SmoI | CTYRAG | 3 cut(s) | 333, 341, 392 |
| Sse9I | AATT | 2 cut(s) | 82, 208 |
| SsiI | CCGC | 1 cut(s) | 470 |
| SstI | GAGCTC | 1 cut(s) | 348 |
| StyD4I | CCNGG | 1 cut(s) | 134 |
| TaiI | ACGT | 1 cut(s) | 252 |
| TaqI | TCGA | 2 cut(s) | 196, 334 |
| TasI | AATT | 2 cut(s) | 82, 208 |
| Tru1I | TTAA | 5 cut(s) | 51, 87, 246, 294, 453 |
| Tru9I | TTAA | 5 cut(s) | 51, 87, 246, 294, 453 |
| TscAI | CASTG | 1 cut(s) | 429 |
| TspDTI | ATGAA | 1 cut(s) | 407 |
| TspRI | CASTG | 1 cut(s) | 429 |
| VspI | ATTAAT | 1 cut(s) | 294 |
| XapI | RAATTY | 1 cut(s) | 82 |
| XceI | RCATGY | 2 cut(s) | 71, 190 |
| XhoI | CTCGAG | 1 cut(s) | 333 |
| Zsp2I | ATGCAT | 1 cut(s) | 460 |