Phosphoenolpyruvate carboxylase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0314571 RchiOBHm_Chr1g0333411 RchiOBHm_Chr1g0341171 RchiOBHm_Chr1g0355601 RchiOBHm_Chr1g0362661 RchiOBHm_Chr2g0135871 RchiOBHm_Chr2g0155311 RchiOBHm_Chr4g0426971 RchiOBHm_Chr4g0434611 RchiOBHm_Chr5g0016171 RchiOBHm_Chr5g0016231 RchiOBHm_Chr6g0248021 RchiOBHm_Chr6g0302761 |
| rosa_laevigata | RLG00000002685 RLG00000008332 RLG00000009004 RLG00000018585 RLG00000023270 RLG00000025198 |
| rosa_multiflora | Rmu_sc0001376.1_g000006 Rmu_sc0002968.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00219200 |
| rosa_rugosa | Rorug01G0313400 Rorug05G0478600 |
| rosa_samantha | Rh1CG246800 Rh2AG443800 Rh2AG514200 Rh2AG551000 Rh2BG052200 Rh2CG430800 Rh2CG499100 Rh4AG183700 Rh4CG195700 Rh4DG179000 Rh5CG135500 Rh5CG135700 Rh5DG275400 Rh5DG564200 Rh6BG040300 Rh7DG279100 |
| rosa_wichuraiana | Rw2G011220 Rw4G022300 Rw7G012030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 120 |
| AclWI | GGATC | 5 cut(s) | 99, 217, 223, 230, 247 |
| AfaI | GTAC | 2 cut(s) | 151, 202 |
| AjnI | CCWGG | 1 cut(s) | 344 |
| AluBI | AGCT | 5 cut(s) | 157, 230, 293, 339, 354 |
| AluI | AGCT | 5 cut(s) | 157, 230, 293, 339, 354 |
| AlwI | GGATC | 5 cut(s) | 99, 217, 223, 230, 247 |
| AseI | ATTAAT | 1 cut(s) | 284 |
| BamHI | GGATCC | 1 cut(s) | 222 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 250, 282 |
| BbsI | GAAGAC | 1 cut(s) | 337 |
| BccI | CCATC | 1 cut(s) | 271 |
| BciT130I | CCWGG | 1 cut(s) | 346 |
| BfaI | CTAG | 1 cut(s) | 227 |
| BlpI | GCTNAGC | 1 cut(s) | 350 |
| Bme1390I | CCNGG | 1 cut(s) | 346 |
| BmiI | GGNNCC | 1 cut(s) | 224 |
| BmrFI | CCNGG | 1 cut(s) | 346 |
| BpiI | GAAGAC | 1 cut(s) | 337 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 350 |
| BpuEI | CTTGAG | 1 cut(s) | 123 |
| BsaJI | CCNNGG | 1 cut(s) | 344 |
| BseBI | CCWGG | 1 cut(s) | 346 |
| BseDI | CCNNGG | 1 cut(s) | 344 |
| BseGI | GGATG | 1 cut(s) | 282 |
| BseMII | CTCAG | 1 cut(s) | 341 |
| BsmI | GAATGC | 1 cut(s) | 186 |
| Bsp143I | GATC | 5 cut(s) | 104, 187, 215, 222, 252 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 350 |
| BspCNI | CTCAG | 1 cut(s) | 342 |
| BspLI | GGNNCC | 1 cut(s) | 224 |
| BspPI | GGATC | 5 cut(s) | 99, 217, 223, 230, 247 |
| BssECI | CCNNGG | 1 cut(s) | 344 |
| BssMI | GATC | 5 cut(s) | 104, 187, 215, 222, 252 |
| Bst2UI | CCWGG | 1 cut(s) | 346 |
| Bst4CI | ACNGT | 1 cut(s) | 118 |
| Bst6I | CTCTTC | 2 cut(s) | 27, 253 |
| BstDEI | CTNAG | 1 cut(s) | 350 |
| BstF5I | GGATG | 1 cut(s) | 282 |
| BstKTI | GATC | 5 cut(s) | 107, 190, 218, 225, 255 |
| BstMBI | GATC | 5 cut(s) | 104, 187, 215, 222, 252 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 299 |
| BstNI | CCWGG | 1 cut(s) | 346 |
| BstSCI | CCNGG | 1 cut(s) | 344 |
| BstV2I | GAAGAC | 1 cut(s) | 337 |
| BstX2I | RGATCY | 2 cut(s) | 104, 222 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 212 |
| BstYI | RGATCY | 2 cut(s) | 104, 222 |
| BtsCI | GGATG | 1 cut(s) | 282 |
| Csp6I | GTAC | 2 cut(s) | 150, 201 |
| CviAII | CATG | 1 cut(s) | 210 |
| CviJI | RGCY | 8 cut(s) | 157, 230, 241, 293, 339, 349, 354, 359 |
| CviKI_1 | RGCY | 8 cut(s) | 157, 230, 241, 293, 339, 349, 354, 359 |
| CviQI | GTAC | 2 cut(s) | 150, 201 |
| DdeI | CTNAG | 1 cut(s) | 350 |
| DpnI | GATC | 5 cut(s) | 106, 189, 217, 224, 254 |
| DpnII | GATC | 5 cut(s) | 104, 187, 215, 222, 252 |
| Eam1104I | CTCTTC | 2 cut(s) | 27, 253 |
| EarI | CTCTTC | 2 cut(s) | 27, 253 |
| EcoRII | CCWGG | 1 cut(s) | 344 |
| FaeI | CATG | 1 cut(s) | 213 |
| FaiI | YATR | 2 cut(s) | 211, 370 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 282, 314 |
| FatI | CATG | 1 cut(s) | 209 |
| FblI | GTMKAC | 1 cut(s) | 120 |
| FokI | GGATG | 1 cut(s) | 289 |
| FspBI | CTAG | 1 cut(s) | 227 |
| Hin1II | CATG | 1 cut(s) | 213 |
| HincII | GTYRAC | 1 cut(s) | 121 |
| HindII | GTYRAC | 1 cut(s) | 121 |
| Hpy166II | GTNNAC | 1 cut(s) | 121 |
| Hpy188I | TCNGA | 3 cut(s) | 16, 195, 257 |
| Hpy8I | GTNNAC | 1 cut(s) | 121 |
| Hpy99I | CGWCG | 1 cut(s) | 195 |
| HpyAV | CCTTC | 4 cut(s) | 22, 43, 51, 79 |
| HpyCH4III | ACNGT | 1 cut(s) | 118 |
| HpyCH4IV | ACGT | 2 cut(s) | 10, 334 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 299 |
| HpyF3I | CTNAG | 1 cut(s) | 350 |
| HpySE526I | ACGT | 2 cut(s) | 10, 334 |
| Hsp92II | CATG | 1 cut(s) | 213 |
| Kzo9I | GATC | 5 cut(s) | 104, 187, 215, 222, 252 |
| LpnPI | CCDG | 4 cut(s) | 33, 204, 331, 358 |
| MaeI | CTAG | 1 cut(s) | 227 |
| MaeII | ACGT | 2 cut(s) | 10, 334 |
| MalI | GATC | 5 cut(s) | 106, 189, 217, 224, 254 |
| MboI | GATC | 5 cut(s) | 104, 187, 215, 222, 252 |
| MboII | GAAGA | 3 cut(s) | 44, 270, 342 |
| MflI | RGATCY | 2 cut(s) | 104, 222 |
| MmeI | TCCRAC | 1 cut(s) | 173 |
| MnlI | CCTC | 1 cut(s) | 147 |
| MseI | TTAA | 2 cut(s) | 284, 305 |
| MspR9I | CCNGG | 1 cut(s) | 346 |
| Mva1269I | GAATGC | 1 cut(s) | 186 |
| MvaI | CCWGG | 1 cut(s) | 346 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 299 |
| NdeII | GATC | 5 cut(s) | 104, 187, 215, 222, 252 |
| NlaIII | CATG | 1 cut(s) | 213 |
| NlaIV | GGNNCC | 1 cut(s) | 224 |
| PctI | GAATGC | 1 cut(s) | 186 |
| PshBI | ATTAAT | 1 cut(s) | 284 |
| Psp6I | CCWGG | 1 cut(s) | 344 |
| PspGI | CCWGG | 1 cut(s) | 344 |
| PspN4I | GGNNCC | 1 cut(s) | 224 |
| PsuI | RGATCY | 2 cut(s) | 104, 222 |
| RsaI | GTAC | 2 cut(s) | 151, 202 |
| RsaNI | GTAC | 2 cut(s) | 150, 201 |
| SalI | GTCGAC | 1 cut(s) | 119 |
| SaqAI | TTAA | 2 cut(s) | 284, 305 |
| Sau3AI | GATC | 5 cut(s) | 104, 187, 215, 222, 252 |
| ScrFI | CCNGG | 1 cut(s) | 346 |
| SetI | ASST | 9 cut(s) | 13, 139, 159, 232, 272, 295, 337, 341, 356 |
| SmlI | CTYRAG | 1 cut(s) | 138 |
| SmoI | CTYRAG | 1 cut(s) | 138 |
| SspMI | CTAG | 1 cut(s) | 227 |
| StyD4I | CCNGG | 1 cut(s) | 344 |
| TaaI | ACNGT | 1 cut(s) | 118 |
| TaiI | ACGT | 2 cut(s) | 13, 337 |
| TaqI | TCGA | 4 cut(s) | 120, 165, 178, 295 |
| Tru1I | TTAA | 2 cut(s) | 284, 305 |
| Tru9I | TTAA | 2 cut(s) | 284, 305 |
| TspDTI | ATGAA | 1 cut(s) | 302 |
| TspGWI | ACGGA | 2 cut(s) | 97, 186 |
| VspI | ATTAAT | 1 cut(s) | 284 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 352 |
| XmiI | GTMKAC | 1 cut(s) | 120 |
| XspI | CTAG | 1 cut(s) | 227 |