Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0314571 RchiOBHm_Chr1g0333411 RchiOBHm_Chr1g0341171 RchiOBHm_Chr1g0355601 RchiOBHm_Chr1g0362661 RchiOBHm_Chr2g0135871 RchiOBHm_Chr2g0155311 RchiOBHm_Chr4g0426971 RchiOBHm_Chr4g0434611 RchiOBHm_Chr5g0016171 RchiOBHm_Chr5g0016231 RchiOBHm_Chr6g0248021 RchiOBHm_Chr6g0302761 |
| rosa_laevigata | RLG00000002685 RLG00000008332 RLG00000009004 RLG00000018585 RLG00000023270 RLG00000025198 |
| rosa_multiflora | Rmu_sc0001376.1_g000006 Rmu_sc0002968.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00219200 |
| rosa_rugosa | Rorug01G0313400 Rorug05G0478600 |
| rosa_samantha | Rh1CG246800 Rh2AG443800 Rh2AG514200 Rh2AG551000 Rh2BG052200 Rh2CG430800 Rh2CG499100 Rh4AG183700 Rh4CG195700 Rh4DG179000 Rh5CG135500 Rh5CG135700 Rh5DG275400 Rh5DG564200 Rh6BG040300 Rh7DG279100 |
| rosa_wichuraiana | Rw2G011220 Rw4G022300 Rw7G012030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 417 |
| AfaI | GTAC | 3 cut(s) | 15, 57, 96 |
| AgsI | TTSAA | 3 cut(s) | 127, 211, 412 |
| AjnI | CCWGG | 1 cut(s) | 100 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 96, 128 |
| AluBI | AGCT | 1 cut(s) | 383 |
| AluI | AGCT | 1 cut(s) | 383 |
| Alw26I | GTCTC | 1 cut(s) | 284 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 122 |
| AspA2I | CCTAGG | 1 cut(s) | 200 |
| AsuHPI | GGTGA | 1 cut(s) | 275 |
| AvrII | CCTAGG | 1 cut(s) | 200 |
| BbsI | GAAGAC | 2 cut(s) | 150, 324 |
| BccI | CCATC | 2 cut(s) | 34, 385 |
| BceAI | ACGGC | 1 cut(s) | 117 |
| BciT130I | CCWGG | 1 cut(s) | 102 |
| BcoDI | GTCTC | 1 cut(s) | 284 |
| BfaI | CTAG | 1 cut(s) | 201 |
| BlnI | CCTAGG | 1 cut(s) | 200 |
| Bme1390I | CCNGG | 1 cut(s) | 102 |
| BmrFI | CCNGG | 1 cut(s) | 102 |
| BmsI | GCATC | 1 cut(s) | 79 |
| BpiI | GAAGAC | 2 cut(s) | 150, 324 |
| BsaBI | GATNNNNATC | 1 cut(s) | 194 |
| BsaI | GGTCTC | 1 cut(s) | 284 |
| BsaJI | CCNNGG | 1 cut(s) | 200 |
| Bse8I | GATNNNNATC | 1 cut(s) | 194 |
| BseBI | CCWGG | 1 cut(s) | 102 |
| BseDI | CCNNGG | 1 cut(s) | 200 |
| BseJI | GATNNNNATC | 1 cut(s) | 194 |
| BseMII | CTCAG | 1 cut(s) | 72 |
| BsmAI | GTCTC | 1 cut(s) | 284 |
| Bso31I | GGTCTC | 1 cut(s) | 284 |
| BspCNI | CTCAG | 1 cut(s) | 73 |
| BspTNI | GGTCTC | 1 cut(s) | 284 |
| BssECI | CCNNGG | 1 cut(s) | 200 |
| BssT1I | CCWWGG | 1 cut(s) | 200 |
| Bst2UI | CCWGG | 1 cut(s) | 102 |
| Bst4CI | ACNGT | 2 cut(s) | 149, 367 |
| BstDEI | CTNAG | 1 cut(s) | 81 |
| BstMAI | GTCTC | 1 cut(s) | 284 |
| BstNI | CCWGG | 1 cut(s) | 102 |
| BstSCI | CCNGG | 1 cut(s) | 100 |
| BstV2I | GAAGAC | 2 cut(s) | 150, 324 |
| BtsIMutI | CAGTG | 1 cut(s) | 341 |
| Csp6I | GTAC | 3 cut(s) | 14, 56, 95 |
| CviAII | CATG | 4 cut(s) | 307, 326, 336, 386 |
| CviJI | RGCY | 2 cut(s) | 132, 383 |
| CviKI_1 | RGCY | 2 cut(s) | 132, 383 |
| CviQI | GTAC | 3 cut(s) | 14, 56, 95 |
| DdeI | CTNAG | 1 cut(s) | 81 |
| DraI | TTTAAA | 1 cut(s) | 358 |
| Eco130I | CCWWGG | 1 cut(s) | 200 |
| Eco31I | GGTCTC | 1 cut(s) | 284 |
| EcoRII | CCWGG | 1 cut(s) | 100 |
| EcoT14I | CCWWGG | 1 cut(s) | 200 |
| ErhI | CCWWGG | 1 cut(s) | 200 |
| FaeI | CATG | 4 cut(s) | 310, 329, 339, 389 |
| FaiI | YATR | 9 cut(s) | 158, 180, 308, 327, 337, 349, 387, 402, 439 |
| FatI | CATG | 4 cut(s) | 306, 325, 335, 385 |
| FblI | GTMKAC | 1 cut(s) | 417 |
| FspBI | CTAG | 1 cut(s) | 201 |
| Hin1II | CATG | 4 cut(s) | 310, 329, 339, 389 |
| HincII | GTYRAC | 2 cut(s) | 304, 418 |
| HindII | GTYRAC | 2 cut(s) | 304, 418 |
| HinfI | GANTC | 2 cut(s) | 77, 329 |
| HphI | GGTGA | 1 cut(s) | 275 |
| Hpy166II | GTNNAC | 2 cut(s) | 304, 418 |
| Hpy188I | TCNGA | 3 cut(s) | 82, 117, 172 |
| Hpy188III | TCNNGA | 1 cut(s) | 281 |
| Hpy8I | GTNNAC | 2 cut(s) | 304, 418 |
| HpyAV | CCTTC | 2 cut(s) | 211, 406 |
| HpyCH4III | ACNGT | 2 cut(s) | 149, 367 |
| HpyCH4V | TGCA | 1 cut(s) | 11 |
| HpyF3I | CTNAG | 1 cut(s) | 81 |
| Hsp92II | CATG | 4 cut(s) | 310, 329, 339, 389 |
| LpnPI | CCDG | 4 cut(s) | 87, 114, 210, 246 |
| LweI | GCATC | 1 cut(s) | 79 |
| MaeI | CTAG | 1 cut(s) | 201 |
| MaeIII | GTNAC | 1 cut(s) | 367 |
| MboII | GAAGA | 2 cut(s) | 155, 329 |
| MnlI | CCTC | 2 cut(s) | 19, 130 |
| MroXI | GAANNNNTTC | 1 cut(s) | 122 |
| MseI | TTAA | 2 cut(s) | 72, 357 |
| MslI | CAYNNNNRTG | 1 cut(s) | 346 |
| MspR9I | CCNGG | 1 cut(s) | 102 |
| MvaI | CCWGG | 1 cut(s) | 102 |
| NlaIII | CATG | 4 cut(s) | 310, 329, 339, 389 |
| PdmI | GAANNNNTTC | 1 cut(s) | 122 |
| PfeI | GAWTC | 2 cut(s) | 77, 329 |
| PfoI | TCCNGGA | 1 cut(s) | 100 |
| Psp6I | CCWGG | 1 cut(s) | 100 |
| PspGI | CCWGG | 1 cut(s) | 100 |
| RsaI | GTAC | 3 cut(s) | 15, 57, 96 |
| RsaNI | GTAC | 3 cut(s) | 14, 56, 95 |
| RseI | CAYNNNNRTG | 1 cut(s) | 346 |
| SalI | GTCGAC | 1 cut(s) | 416 |
| SaqAI | TTAA | 2 cut(s) | 72, 357 |
| ScrFI | CCNGG | 1 cut(s) | 102 |
| SetI | ASST | 4 cut(s) | 30, 69, 385, 417 |
| SfaNI | GCATC | 1 cut(s) | 79 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 346 |
| SspMI | CTAG | 1 cut(s) | 201 |
| StyD4I | CCNGG | 1 cut(s) | 100 |
| StyI | CCWWGG | 1 cut(s) | 200 |
| TaaI | ACNGT | 2 cut(s) | 149, 367 |
| TaqI | TCGA | 2 cut(s) | 282, 417 |
| TatI | WGTACW | 2 cut(s) | 13, 94 |
| TfiI | GAWTC | 2 cut(s) | 77, 329 |
| Tru1I | TTAA | 2 cut(s) | 72, 357 |
| Tru9I | TTAA | 2 cut(s) | 72, 357 |
| TscAI | CASTG | 1 cut(s) | 348 |
| TspDTI | ATGAA | 4 cut(s) | 189, 195, 312, 321 |
| TspRI | CASTG | 1 cut(s) | 348 |
| XmaJI | CCTAGG | 1 cut(s) | 200 |
| XmiI | GTMKAC | 1 cut(s) | 417 |
| XmnI | GAANNNNTTC | 1 cut(s) | 122 |
| XspI | CTAG | 1 cut(s) | 201 |