Phosphoenolpyruvate carboxylase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0314571 RchiOBHm_Chr1g0333411 RchiOBHm_Chr1g0341171 RchiOBHm_Chr1g0355601 RchiOBHm_Chr1g0362661 RchiOBHm_Chr2g0135871 RchiOBHm_Chr2g0155311 RchiOBHm_Chr4g0426971 RchiOBHm_Chr4g0434611 RchiOBHm_Chr5g0016171 RchiOBHm_Chr5g0016231 RchiOBHm_Chr6g0248021 RchiOBHm_Chr6g0302761 |
| rosa_laevigata | RLG00000002685 RLG00000008332 RLG00000009004 RLG00000018585 RLG00000023270 RLG00000025198 |
| rosa_multiflora | Rmu_sc0001376.1_g000006 Rmu_sc0002968.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00219200 |
| rosa_rugosa | Rorug01G0313400 Rorug05G0478600 |
| rosa_samantha | Rh1CG246800 Rh2AG443800 Rh2AG514200 Rh2AG551000 Rh2BG052200 Rh2CG430800 Rh2CG499100 Rh4AG183700 Rh4CG195700 Rh4DG179000 Rh5CG135500 Rh5CG135700 Rh5DG275400 Rh5DG564200 Rh6BG040300 Rh7DG279100 |
| rosa_wichuraiana | Rw2G011220 Rw4G022300 Rw7G012030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 67 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 135 |
| AgsI | TTSAA | 2 cut(s) | 284, 299 |
| AjnI | CCWGG | 1 cut(s) | 156 |
| AluBI | AGCT | 2 cut(s) | 184, 270 |
| AluI | AGCT | 2 cut(s) | 184, 270 |
| Alw26I | GTCTC | 2 cut(s) | 93, 125 |
| Aor13HI | TCCGGA | 1 cut(s) | 67 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 303 |
| AspS9I | GGNCC | 3 cut(s) | 65, 168, 190 |
| AsuHPI | GGTGA | 2 cut(s) | 18, 23 |
| AvaII | GGWCC | 3 cut(s) | 65, 168, 190 |
| BccI | CCATC | 2 cut(s) | 56, 100 |
| BciT130I | CCWGG | 1 cut(s) | 158 |
| BcoDI | GTCTC | 2 cut(s) | 93, 125 |
| BfaI | CTAG | 1 cut(s) | 117 |
| Bme1390I | CCNGG | 1 cut(s) | 158 |
| Bme18I | GGWCC | 3 cut(s) | 65, 168, 190 |
| BmgT120I | GGNCC | 3 cut(s) | 65, 168, 190 |
| BmiI | GGNNCC | 1 cut(s) | 192 |
| BmrFI | CCNGG | 1 cut(s) | 158 |
| Bpu10I | CCTNAGC | 1 cut(s) | 271 |
| BsaJI | CCNNGG | 1 cut(s) | 156 |
| BsaWI | WCCGGW | 1 cut(s) | 67 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 28 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 135 |
| Bse1I | ACTGG | 1 cut(s) | 171 |
| Bse3DI | GCAATG | 1 cut(s) | 123 |
| BseAI | TCCGGA | 1 cut(s) | 67 |
| BseBI | CCWGG | 1 cut(s) | 158 |
| BseDI | CCNNGG | 1 cut(s) | 156 |
| BseGI | GGATG | 2 cut(s) | 67, 92 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 135 |
| BseMI | GCAATG | 1 cut(s) | 123 |
| BseMII | CTCAG | 2 cut(s) | 218, 330 |
| BseNI | ACTGG | 1 cut(s) | 171 |
| BsiSI | CCGG | 1 cut(s) | 68 |
| BslFI | GGGAC | 1 cut(s) | 139 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 135 |
| BsmAI | GTCTC | 2 cut(s) | 93, 125 |
| BsmFI | GGGAC | 1 cut(s) | 139 |
| Bsp13I | TCCGGA | 1 cut(s) | 67 |
| Bsp143I | GATC | 1 cut(s) | 316 |
| BspCNI | CTCAG | 2 cut(s) | 217, 331 |
| BspEI | TCCGGA | 1 cut(s) | 67 |
| BspLI | GGNNCC | 1 cut(s) | 192 |
| BsrDI | GCAATG | 1 cut(s) | 123 |
| BsrI | ACTGG | 1 cut(s) | 171 |
| BssECI | CCNNGG | 1 cut(s) | 156 |
| BssMI | GATC | 1 cut(s) | 316 |
| Bst2UI | CCWGG | 1 cut(s) | 158 |
| Bst4CI | ACNGT | 1 cut(s) | 264 |
| Bst6I | CTCTTC | 1 cut(s) | 111 |
| BstDEI | CTNAG | 3 cut(s) | 204, 271, 339 |
| BstF5I | GGATG | 2 cut(s) | 67, 92 |
| BstKTI | GATC | 1 cut(s) | 319 |
| BstMAI | GTCTC | 2 cut(s) | 93, 125 |
| BstMBI | GATC | 1 cut(s) | 316 |
| BstNI | CCWGG | 1 cut(s) | 158 |
| BstSCI | CCNGG | 1 cut(s) | 156 |
| BtsCI | GGATG | 2 cut(s) | 67, 92 |
| Cfr13I | GGNCC | 3 cut(s) | 65, 168, 190 |
| CviJI | RGCY | 3 cut(s) | 184, 199, 270 |
| CviKI_1 | RGCY | 3 cut(s) | 184, 199, 270 |
| DdeI | CTNAG | 3 cut(s) | 204, 271, 339 |
| DpnI | GATC | 1 cut(s) | 318 |
| DpnII | GATC | 1 cut(s) | 316 |
| Eam1104I | CTCTTC | 1 cut(s) | 111 |
| EarI | CTCTTC | 1 cut(s) | 111 |
| Eco47I | GGWCC | 3 cut(s) | 65, 168, 190 |
| EcoRII | CCWGG | 1 cut(s) | 156 |
| FaiI | YATR | 5 cut(s) | 56, 213, 228, 248, 315 |
| FaqI | GGGAC | 1 cut(s) | 139 |
| FokI | GGATG | 2 cut(s) | 74, 79 |
| FspBI | CTAG | 1 cut(s) | 117 |
| HapII | CCGG | 1 cut(s) | 68 |
| HindIII | AAGCTT | 1 cut(s) | 182 |
| HinfI | GANTC | 3 cut(s) | 13, 71, 152 |
| HpaII | CCGG | 1 cut(s) | 68 |
| HphI | GGTGA | 2 cut(s) | 18, 23 |
| Hpy188I | TCNGA | 2 cut(s) | 18, 207 |
| Hpy188III | TCNNGA | 2 cut(s) | 68, 178 |
| HpyAV | CCTTC | 1 cut(s) | 159 |
| HpyCH4III | ACNGT | 1 cut(s) | 264 |
| HpyCH4V | TGCA | 1 cut(s) | 215 |
| HpyF3I | CTNAG | 3 cut(s) | 204, 271, 339 |
| Kpn2I | TCCGGA | 1 cut(s) | 67 |
| Kzo9I | GATC | 1 cut(s) | 316 |
| LpnPI | CCDG | 7 cut(s) | 50, 81, 110, 143, 170, 184, 191 |
| MaeI | CTAG | 1 cut(s) | 117 |
| MaeIII | GTNAC | 1 cut(s) | 308 |
| MalI | GATC | 1 cut(s) | 318 |
| MboI | GATC | 1 cut(s) | 316 |
| MboII | GAAGA | 1 cut(s) | 98 |
| MluCI | AATT | 3 cut(s) | 45, 216, 231 |
| MlyI | GAGTC | 2 cut(s) | 7, 161 |
| MmeI | TCCRAC | 1 cut(s) | 142 |
| MnlI | CCTC | 3 cut(s) | 34, 39, 129 |
| MroI | TCCGGA | 1 cut(s) | 67 |
| MroXI | GAANNNNTTC | 1 cut(s) | 303 |
| MspI | CCGG | 1 cut(s) | 68 |
| MspR9I | CCNGG | 1 cut(s) | 158 |
| MvaI | CCWGG | 1 cut(s) | 158 |
| NdeII | GATC | 1 cut(s) | 316 |
| NlaIV | GGNNCC | 1 cut(s) | 192 |
| PdmI | GAANNNNTTC | 1 cut(s) | 303 |
| PfeI | GAWTC | 1 cut(s) | 71 |
| PleI | GAGTC | 2 cut(s) | 7, 160 |
| PpsI | GAGTC | 2 cut(s) | 7, 160 |
| Psp6I | CCWGG | 1 cut(s) | 156 |
| PspGI | CCWGG | 1 cut(s) | 156 |
| PspN4I | GGNNCC | 1 cut(s) | 192 |
| PspPI | GGNCC | 3 cut(s) | 65, 168, 190 |
| Sau3AI | GATC | 1 cut(s) | 316 |
| Sau96I | GGNCC | 3 cut(s) | 65, 168, 190 |
| SchI | GAGTC | 2 cut(s) | 7, 161 |
| ScrFI | CCNGG | 1 cut(s) | 158 |
| SetI | ASST | 7 cut(s) | 26, 31, 162, 170, 186, 272, 277 |
| SinI | GGWCC | 3 cut(s) | 65, 168, 190 |
| Sse9I | AATT | 3 cut(s) | 45, 216, 231 |
| SspMI | CTAG | 1 cut(s) | 117 |
| StyD4I | CCNGG | 1 cut(s) | 156 |
| TaaI | ACNGT | 1 cut(s) | 264 |
| TasI | AATT | 3 cut(s) | 45, 216, 231 |
| TfiI | GAWTC | 1 cut(s) | 71 |
| TspDTI | ATGAA | 2 cut(s) | 263, 303 |
| VpaK11BI | GGWCC | 3 cut(s) | 65, 168, 190 |
| XmnI | GAANNNNTTC | 1 cut(s) | 303 |
| XspI | CTAG | 1 cut(s) | 117 |