RchiOBHm_Chr1g0378531

DNA-directed primase polymerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001804
Physical Location & Seq
Forward (+)
64985176 .. 64989287
4112 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60194

Sequence Viewer

Length: 1758 bp
ATGGACGACGTTGATCGGTTGTTCGAGTGCTTCAAGTGCGGCATCTCACCACCACCATCTGCTTTGAGAGAGAGAAAGAGAATCAAGAGGCAACCGATTCAGAGGAGTAAAGCCCAGGAAGTCGATTCTCCGCGGTCGCCGGAGCAGATAAAGAAAATCTCATCAGATTTACAGCTTTCTGCAGAAAAACTTGTTCAGGGTGGTTCTACAACAGTCGAAGCAAAAAGCTTTAATCGGAGGAAGCAGTTATCTCCGGTTGTATTTTATGGGTCTCCACATGGTGTACCTCCAAAGCAACCATCAAGATTGTTGCTGCGAGTGTTACGTGAGATACGTGTTGATCTCACTGCACAGAAACGATTGAGCTCAAGGAAGGAAGTATGGGCTACATTTCCAAGGCAGGAGGAAGCAATGCAGTTTGCCAAACGGCACGAGAATGTTCACGTTTTTAGTTATCAAGATCACTTCAGTGGACAAAGAAGGTTCCTTGTTTCAAGTTATAATGAGTTTTGGAGAAGGTACAAGATTATGGAGTCCAAGTTTCGTCACCATTACGAAGTCATTCAGGAGGGTTTACCATGCCACCTTTATTTTGACCTGGAGTTCAATAAGAAAGACAATGGAAACAGAAATGGAGATGAAATGGTTGATCTTTTAATATCAGTTGTTTTTGAAGCCTTGCTTGAAAAGTATTCTATTCAGGGGAACATGGAATGGATATTGGAACTTGATTCCTCTACTGAAGCAAAGTTCTCTCGACATTTAATTATTCGCATTCAGAAGACTGCTTTTAAGGACAACTCACATGTAGGTGCATTTGTCACCGAGATATGCTCACGGATATCAAGTGCAAAAGGGAGGGATGGAAGATTTGAGAATTTGTTTATTAGAAAAGATTCAAGCTCTGCAGACTTTAGTCACCTATTTGTGGACACTGCTGTGTATACCAGGAATCGTTGTTTTCGTTTAGCTCTATCATCAAAGGCAGGGAAGAATTCAGTGCTTCTACCTACTGGGCGCTTCAAAGCTAAGGACATGATGTCTGAAGAGGAGATGTTCATGGCGTCTTTGATCTGCAATTTGGAAGTTGATTGTGAGAAGCTTCTAGTCTGCAAATCTGATCTTGATTGTATAAAGACCCTGCATTTTGATACAGAGGTCAACCCTAGTTTTGGAAAATCTTACAGTTGGCCCCAAGAATTTGCATTGAATGGTTGCACCAGTGATGCTTCAGCAACATACTTCCTGGGGAAATCTCCATTTCCAGCTTTGGATGCATTTGTAGAATTTGTTGCTACAATTGGAAATGTCTCAGGTAAAATTCGCAGCTGGTATTGGTTCTCAGAGTTTGGACTCATGGTCTACAGCATGTCAAGAAACAGATACTGTGAGCGAATTGGCAGACAGCACAAAAGCAATCATGTGATATACATTGCTGACCTCAGAAAGGGTGTTTATTATCAGAAATGTCATGATCCCGACTGCAGAGGCTACCGTTCTCCATCACGTCCGATTCCATGGAATATTGTCCCTGACATGGTGTATGAATGTCAAAAAGATCATGAACGTGTTTTTTTTGATGATGAGAACACGGCAAGCAGCGGCGTTACAGATTCATGGTGGCTTGAAGCTATAAGAGTTGCAGATGAAGTTGAAAATAAGCAGAATTCATTAGAGCTCAGCAATCCGGAATACATGGATCCAAAATATGACGACTGGTGGACTTCTGCTGCTTCCCAAGTTGCACTAACGCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Herpes_UL52

Protein Analysis

585

Amino Acids

67.78

Weight (kDa)

8.38

Isoelectric Point (pI)

47.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Herpes_UL52 PF03121 446 - 507 2.8e-12 Herpesviridae UL52/UL70 DNA primase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 501
AccI GTMKAC 2 cut(s) 944, 1362
AccII CGCG 1 cut(s) 133
AccIII TCCGGA 1 cut(s) 1687
AciI CCGC 4 cut(s) 39, 131, 133, 1602
AclWI GGATC 3 cut(s) 1469, 1694, 1707
AcsI RAATTY 6 cut(s) 877, 994, 1199, 1286, 1320, 1666
AcuI CTGAAG 4 cut(s) 451, 762, 1065, 1215
AcyI GRCGYC 1 cut(s) 1064
AdeI CACNNNGTG 1 cut(s) 281
AfaI GTAC 2 cut(s) 285, 521
AfiI CCNNNNNNNGG 4 cut(s) 928, 1172, 1447, 1537
AflIII ACRYGT 3 cut(s) 334, 805, 1567
AhdI GACNNNNNGTC 2 cut(s) 1039, 1358
AjiI CACGTC 1 cut(s) 1508
AjnI CCWGG 4 cut(s) 114, 597, 947, 1245
AleI CACNNNNGTG 2 cut(s) 468, 938
Alw21I GWGCWC 2 cut(s) 368, 1680
Alw26I GTCTC 2 cut(s) 276, 1315
AlwI GGATC 3 cut(s) 1469, 1694, 1707
AlwNI CAGNNNCTG 1 cut(s) 1386
Aor13HI TCCGGA 1 cut(s) 1687
AoxI GGCC 1 cut(s) 1190
ApeKI GCWGC 4 cut(s) 313, 1326, 1599, 1730
ApoI RAATTY 6 cut(s) 877, 994, 1199, 1286, 1320, 1666
Asp700I GAANNNNTTC 2 cut(s) 561, 895
AspLEI GCGC 1 cut(s) 1020
AspS9I GGNCC 1 cut(s) 1191
AsuHPI GGTGA 4 cut(s) 39, 539, 814, 911
BaeI ACNNNNGTAYC 2 cut(s) 1143, 1176
BamHI GGATCC 1 cut(s) 1699
BanII GRGCYC 2 cut(s) 368, 1680
BauI CACGAG 1 cut(s) 431
BbsI GAAGAC 1 cut(s) 788
Bbv12I GWGCWC 2 cut(s) 368, 1680
BbvI GCAGC 4 cut(s) 300, 1338, 1611, 1717
BccI CCATC 4 cut(s) 64, 307, 857, 1510
BceAI ACGGC 2 cut(s) 443, 1608
BciT130I CCWGG 4 cut(s) 116, 599, 949, 1247
BcoDI GTCTC 2 cut(s) 276, 1315
BfaI CTAG 2 cut(s) 1106, 1167
BfmI CTRYAG 4 cut(s) 180, 906, 1363, 1483
BfoI RGCGCY 1 cut(s) 1021
BisI GCNGC 6 cut(s) 40, 314, 1327, 1600, 1603, 1731
BlpI GCTNAGC 1 cut(s) 1679
BlsI GCNGC 6 cut(s) 41, 315, 1328, 1601, 1604, 1732
Bme1390I CCNGG 4 cut(s) 116, 599, 949, 1247
BmeRI GACNNNNNGTC 2 cut(s) 1039, 1358
BmgBI CACGTC 1 cut(s) 1508
BmgT120I GGNCC 1 cut(s) 1191
BmiI GGNNCC 3 cut(s) 485, 1193, 1701
BmrFI CCNGG 4 cut(s) 116, 599, 949, 1247
BmrI ACTGGG 1 cut(s) 1023
BmsI GCATC 3 cut(s) 51, 1216, 1264
BmuI ACTGGG 1 cut(s) 1023
BoxI GACNNNNGTC 1 cut(s) 915
BpiI GAAGAC 1 cut(s) 788
BplI GAGNNNNNCTC 2 cut(s) 818, 850
BpmI CTGGAG 1 cut(s) 620
Bpu10I CCTNAGC 1 cut(s) 1029
Bpu1102I GCTNAGC 1 cut(s) 1679
BpuEI CTTGAG 1 cut(s) 352
BsaAI YACGTR 2 cut(s) 326, 335
BsaHI GRCGYC 1 cut(s) 1064
BsaI GGTCTC 1 cut(s) 276
BsaJI CCNNGG 5 cut(s) 114, 131, 395, 1246, 1517
BsaWI WCCGGW 2 cut(s) 253, 1687
BsaXI ACNNNNNCTCC 2 cut(s) 524, 554
Bsc4I CCNNNNNNNGG 4 cut(s) 928, 1172, 1447, 1537
Bse1I ACTGG 3 cut(s) 1018, 1221, 1721
Bse3DI GCAATG 2 cut(s) 417, 1431
BseAI TCCGGA 1 cut(s) 1687
BseBI CCWGG 4 cut(s) 116, 599, 949, 1247
BseDI CCNNGG 5 cut(s) 114, 131, 395, 1246, 1517
BseGI GGATG 2 cut(s) 868, 1279
BseLI CCNNNNNNNGG 4 cut(s) 928, 1172, 1447, 1537
BseMI GCAATG 2 cut(s) 417, 1431
BseMII CTCAG 4 cut(s) 1326, 1356, 1456, 1693
BseNI ACTGG 3 cut(s) 1018, 1221, 1721
BseRI GAGGAG 2 cut(s) 118, 1064
BseXI GCAGC 4 cut(s) 300, 1338, 1611, 1717
BsgI GTGCAG 1 cut(s) 333
Bsh1236I CGCG 1 cut(s) 133
Bsh1285I CGRYCG 1 cut(s) 137
BshFI GGCC 1 cut(s) 1192
BsiEI CGRYCG 1 cut(s) 137
BsiHKAI GWGCWC 2 cut(s) 368, 1680
BsiSI CCGG 3 cut(s) 140, 254, 1688
BslFI GGGAC 1 cut(s) 1514
BslI CCNNNNNNNGG 4 cut(s) 928, 1172, 1447, 1537
BsmAI GTCTC 2 cut(s) 276, 1315
BsmFI GGGAC 1 cut(s) 1514
BsmI GAATGC 1 cut(s) 774
BsnI GGCC 1 cut(s) 1192
Bso31I GGTCTC 1 cut(s) 276
Bsp1286I GDGCHC 2 cut(s) 368, 1680
Bsp13I TCCGGA 1 cut(s) 1687
Bsp143I GATC 9 cut(s) 13, 340, 460, 649, 1071, 1120, 1474, 1558, 1699
Bsp1720I GCTNAGC 1 cut(s) 1679
Bsp19I CCATGG 1 cut(s) 1517
BspACI CCGC 4 cut(s) 39, 131, 133, 1602
BspANI GGCC 1 cut(s) 1192
BspCNI CTCAG 4 cut(s) 1325, 1355, 1455, 1692
BspEI TCCGGA 1 cut(s) 1687
BspFNI CGCG 1 cut(s) 133
BspHI TCATGA 2 cut(s) 1471, 1561
BspLI GGNNCC 3 cut(s) 485, 1193, 1701
BspMAI CTGCAG 3 cut(s) 184, 910, 1487
BspPI GGATC 3 cut(s) 1469, 1694, 1707
BspTNI GGTCTC 1 cut(s) 276
BsrDI GCAATG 2 cut(s) 417, 1431
BsrI ACTGG 3 cut(s) 1018, 1221, 1721
BssECI CCNNGG 5 cut(s) 114, 131, 395, 1246, 1517
BssMI GATC 9 cut(s) 13, 340, 460, 649, 1071, 1120, 1474, 1558, 1699
BssNAI GTATAC 1 cut(s) 945
BssNI GRCGYC 1 cut(s) 1064
BssSI CACGAG 1 cut(s) 431
BssT1I CCWWGG 2 cut(s) 395, 1517
Bst1107I GTATAC 1 cut(s) 945
Bst2BI CACGAG 1 cut(s) 431
Bst2UI CCWGG 4 cut(s) 116, 599, 949, 1247
Bst4CI ACNGT 4 cut(s) 214, 1187, 1388, 1496
Bst6I CTCTTC 1 cut(s) 1041
BstACI GRCGYC 1 cut(s) 1064
BstBAI YACGTR 2 cut(s) 326, 335
BstC8I GCNNGC 1 cut(s) 1597
BstDEI CTNAG 5 cut(s) 1029, 1312, 1342, 1442, 1679
BstDSI CCRYGG 2 cut(s) 131, 1517
BstENI CCTNNNNNAGG 1 cut(s) 1445
BstF5I GGATG 2 cut(s) 868, 1279
BstFNI CGCG 1 cut(s) 133
BstH2I RGCGCY 1 cut(s) 1021
BstHHI GCGC 1 cut(s) 1020
BstKTI GATC 9 cut(s) 16, 343, 463, 652, 1074, 1123, 1477, 1561, 1702
BstMAI GTCTC 2 cut(s) 276, 1315
BstMBI GATC 9 cut(s) 13, 340, 460, 649, 1071, 1120, 1474, 1558, 1699
BstMCI CGRYCG 1 cut(s) 137
BstMWI GCNNNNNNNGC 2 cut(s) 36, 1274
BstNI CCWGG 4 cut(s) 116, 599, 949, 1247
BstNSI RCATGY 2 cut(s) 809, 1372
BstPAI GACNNNNGTC 1 cut(s) 915
BstSCI CCNGG 4 cut(s) 114, 597, 947, 1245
BstSFI CTRYAG 4 cut(s) 180, 906, 1363, 1483
BstUI CGCG 1 cut(s) 133
BstV1I GCAGC 4 cut(s) 300, 1338, 1611, 1717
BstV2I GAAGAC 1 cut(s) 788
BstX2I RGATCY 1 cut(s) 1699
BstYI RGATCY 1 cut(s) 1699
BstZ17I GTATAC 1 cut(s) 945
BsuRI GGCC 1 cut(s) 1192
BtgI CCRYGG 2 cut(s) 131, 1517
BtrI CACGTC 1 cut(s) 1508
BtsCI GGATG 2 cut(s) 868, 1279
BtsI GCAGTG 2 cut(s) 345, 933
BtsIMutI CAGTG 5 cut(s) 345, 475, 933, 1005, 1228
Cac8I GCNNGC 1 cut(s) 1597
CaiI CAGNNNCTG 1 cut(s) 1386
CciI TCATGA 2 cut(s) 1471, 1561
CfoI GCGC 1 cut(s) 1020
Cfr13I GGNCC 1 cut(s) 1191
Cfr42I CCGCGG 1 cut(s) 134
CseI GACGC 1 cut(s) 1053
Csp6I GTAC 2 cut(s) 284, 520
CviQI GTAC 2 cut(s) 284, 520
DdeI CTNAG 5 cut(s) 1029, 1312, 1342, 1442, 1679
DpnI GATC 9 cut(s) 15, 342, 462, 651, 1073, 1122, 1476, 1560, 1701
DpnII GATC 9 cut(s) 13, 340, 460, 649, 1071, 1120, 1474, 1558, 1699
DraIII CACNNNGTG 1 cut(s) 281
DriI GACNNNNNGTC 2 cut(s) 1039, 1358
Eam1104I CTCTTC 1 cut(s) 1041
Eam1105I GACNNNNNGTC 2 cut(s) 1039, 1358
EarI CTCTTC 1 cut(s) 1041
Ecl136II GAGCTC 2 cut(s) 366, 1678
Eco130I CCWWGG 2 cut(s) 395, 1517
Eco24I GRGCYC 2 cut(s) 368, 1680
Eco31I GGTCTC 1 cut(s) 276
Eco32I GATATC 1 cut(s) 843
Eco53kI GAGCTC 2 cut(s) 366, 1678
Eco57I CTGAAG 4 cut(s) 451, 762, 1065, 1215
EcoICRI GAGCTC 2 cut(s) 366, 1678
EcoNI CCTNNNNNAGG 1 cut(s) 1445
EcoRI GAATTC 2 cut(s) 994, 1666
EcoRII CCWGG 4 cut(s) 114, 597, 947, 1245
EcoRV GATATC 1 cut(s) 843
EcoT14I CCWWGG 2 cut(s) 395, 1517
EcoT22I ATGCAT 1 cut(s) 1279
EcoT38I GRGCYC 2 cut(s) 368, 1680
ErhI CCWWGG 2 cut(s) 395, 1517
FalI AAGNNNNNCTT 2 cut(s) 666, 698
FaqI GGGAC 1 cut(s) 1514
FblI GTMKAC 2 cut(s) 944, 1362
Fnu4HI GCNGC 6 cut(s) 40, 314, 1327, 1600, 1603, 1731
FokI GGATG 2 cut(s) 875, 1286
FriOI GRGCYC 2 cut(s) 368, 1680
Fsp4HI GCNGC 6 cut(s) 40, 314, 1327, 1600, 1603, 1731
FspBI CTAG 2 cut(s) 1106, 1167
GlaI GCGC 1 cut(s) 1019
GluI GCNGC 6 cut(s) 40, 314, 1327, 1600, 1603, 1731
GsuI CTGGAG 1 cut(s) 620
HaeII RGCGCY 1 cut(s) 1021
HaeIII GGCC 1 cut(s) 1192
HapII CCGG 3 cut(s) 140, 254, 1688
HgaI GACGC 1 cut(s) 1053
HhaI GCGC 1 cut(s) 1020
Hin1I GRCGYC 1 cut(s) 1064
Hin6I GCGC 1 cut(s) 1018
HinP1I GCGC 1 cut(s) 1018
HincII GTYRAC 1 cut(s) 1162
HindII GTYRAC 1 cut(s) 1162
HindIII AAGCTT 2 cut(s) 226, 1100
HpaII CCGG 3 cut(s) 140, 254, 1688
HphI GGTGA 4 cut(s) 39, 539, 814, 911
Hpy166II GTNNAC 9 cut(s) 284, 442, 473, 575, 931, 945, 1162, 1363, 1722
Hpy8I GTNNAC 9 cut(s) 284, 442, 473, 575, 931, 945, 1162, 1363, 1722
Hpy99I CGWCG 1 cut(s) 11
HpyAV CCTTC 3 cut(s) 367, 474, 510
HpyCH4III ACNGT 4 cut(s) 214, 1187, 1388, 1496
HpyCH4IV ACGT 6 cut(s) 9, 325, 334, 444, 1507, 1567
HpyF10VI GCNNNNNNNGC 2 cut(s) 36, 1274
HpyF3I CTNAG 5 cut(s) 1029, 1312, 1342, 1442, 1679
HpySE526I ACGT 6 cut(s) 9, 325, 334, 444, 1507, 1567
Hsp92I GRCGYC 1 cut(s) 1064
HspAI GCGC 1 cut(s) 1018
Kpn2I TCCGGA 1 cut(s) 1687
KspI CCGCGG 1 cut(s) 134
Kzo9I GATC 9 cut(s) 13, 340, 460, 649, 1071, 1120, 1474, 1558, 1699
LmnI GCTCC 1 cut(s) 142
Lsp1109I GCAGC 4 cut(s) 300, 1338, 1611, 1717
LweI GCATC 3 cut(s) 51, 1216, 1264
MaeI CTAG 2 cut(s) 1106, 1167
MaeII ACGT 6 cut(s) 9, 325, 334, 444, 1507, 1567
MaeIII GTNAC 5 cut(s) 321, 545, 820, 917, 1606
MalI GATC 9 cut(s) 15, 342, 462, 651, 1073, 1122, 1476, 1560, 1701
MboI GATC 9 cut(s) 13, 340, 460, 649, 1071, 1120, 1474, 1558, 1699
MboII GAAGA 4 cut(s) 793, 879, 1003, 1058
MfeI CAATTG 1 cut(s) 1299
MflI RGATCY 1 cut(s) 1699
MhlI GDGCHC 2 cut(s) 368, 1680
MlyI GAGTC 2 cut(s) 542, 1347
Mph1103I ATGCAT 1 cut(s) 1279
MroI TCCGGA 1 cut(s) 1687
MroXI GAANNNNTTC 2 cut(s) 561, 895
MseI TTAA 4 cut(s) 231, 656, 764, 792
MslI CAYNNNNRTG 5 cut(s) 435, 468, 810, 938, 1566
MspA1I CMGCKG 3 cut(s) 133, 1329, 1602
MspI CCGG 3 cut(s) 140, 254, 1688
MspR9I CCNGG 4 cut(s) 116, 599, 949, 1247
MunI CAATTG 1 cut(s) 1299
Mva1269I GAATGC 1 cut(s) 774
MvaI CCWGG 4 cut(s) 116, 599, 949, 1247
MvnI CGCG 1 cut(s) 133
MwoI GCNNNNNNNGC 2 cut(s) 36, 1274
NcoI CCATGG 1 cut(s) 1517
NdeII GATC 9 cut(s) 13, 340, 460, 649, 1071, 1120, 1474, 1558, 1699
NlaIV GGNNCC 3 cut(s) 485, 1193, 1701
NmuCI GTSAC 3 cut(s) 545, 820, 917
NsiI ATGCAT 1 cut(s) 1279
NspI RCATGY 2 cut(s) 809, 1372
OliI CACNNNNGTG 2 cut(s) 468, 938
PagI TCATGA 2 cut(s) 1471, 1561
PciI ACATGT 1 cut(s) 805
PcsI WCGNNNNNNNCGW 2 cut(s) 331, 961
PctI GAATGC 1 cut(s) 774
PdmI GAANNNNTTC 2 cut(s) 561, 895
PfeI GAWTC 8 cut(s) 81, 97, 125, 731, 896, 952, 1513, 1613
PkrI GCNGC 6 cut(s) 41, 315, 1328, 1601, 1604, 1732
PleI GAGTC 2 cut(s) 541, 1347
PpsI GAGTC 2 cut(s) 541, 1347
Ppu21I YACGTR 2 cut(s) 326, 335
PscI ACATGT 1 cut(s) 805
PshAI GACNNNNGTC 1 cut(s) 915
PsiI TTATAA 1 cut(s) 501
Psp124BI GAGCTC 2 cut(s) 368, 1680
Psp6I CCWGG 4 cut(s) 114, 597, 947, 1245
PspGI CCWGG 4 cut(s) 114, 597, 947, 1245
PspN4I GGNNCC 3 cut(s) 485, 1193, 1701
PspPI GGNCC 1 cut(s) 1191
PstI CTGCAG 3 cut(s) 184, 910, 1487
PstNI CAGNNNCTG 1 cut(s) 1386
PsuI RGATCY 1 cut(s) 1699
PvuII CAGCTG 1 cut(s) 1329
RsaI GTAC 2 cut(s) 285, 521
RsaNI GTAC 2 cut(s) 284, 520
RseI CAYNNNNRTG 5 cut(s) 435, 468, 810, 938, 1566
SacI GAGCTC 2 cut(s) 368, 1680
SacII CCGCGG 1 cut(s) 134
SaqAI TTAA 4 cut(s) 231, 656, 764, 792
SatI GCNGC 6 cut(s) 40, 314, 1327, 1600, 1603, 1731
Sau3AI GATC 9 cut(s) 13, 340, 460, 649, 1071, 1120, 1474, 1558, 1699
Sau96I GGNCC 1 cut(s) 1191
SchI GAGTC 2 cut(s) 542, 1347
ScrFI CCNGG 4 cut(s) 116, 599, 949, 1247
SduI GDGCHC 2 cut(s) 368, 1680
SfaNI GCATC 3 cut(s) 51, 1216, 1264
SfcI CTRYAG 4 cut(s) 180, 906, 1363, 1483
Sfr303I CCGCGG 1 cut(s) 134
SgrBI CCGCGG 1 cut(s) 134
SmiMI CAYNNNNRTG 5 cut(s) 435, 468, 810, 938, 1566
SmlI CTYRAG 1 cut(s) 367
SmoI CTYRAG 1 cut(s) 367
SsiI CCGC 4 cut(s) 39, 131, 133, 1602
SspI AATATT 1 cut(s) 1525
SspMI CTAG 2 cut(s) 1106, 1167
SstI GAGCTC 2 cut(s) 368, 1680
StyD4I CCNGG 4 cut(s) 114, 597, 947, 1245
StyI CCWWGG 2 cut(s) 395, 1517
TaaI ACNGT 4 cut(s) 214, 1187, 1388, 1496
TaiI ACGT 6 cut(s) 12, 328, 337, 447, 1510, 1570
TaqI TCGA 4 cut(s) 24, 123, 216, 757
TauI GCSGC 2 cut(s) 42, 1605
TfiI GAWTC 8 cut(s) 81, 97, 125, 731, 896, 952, 1513, 1613
Tru1I TTAA 4 cut(s) 231, 656, 764, 792
Tru9I TTAA 4 cut(s) 231, 656, 764, 792
TscAI CASTG 5 cut(s) 352, 475, 940, 1005, 1228
TseFI GTSAC 3 cut(s) 545, 820, 917
TseI GCWGC 4 cut(s) 313, 1326, 1599, 1730
Tsp45I GTSAC 3 cut(s) 545, 820, 917
TspDTI ATGAA 7 cut(s) 654, 1048, 1560, 1578, 1605, 1659, 1662
TspGWI ACGGA 1 cut(s) 853
TspRI CASTG 5 cut(s) 352, 475, 940, 1005, 1228
XagI CCTNNNNNAGG 1 cut(s) 1445
XapI RAATTY 6 cut(s) 877, 994, 1199, 1286, 1320, 1666
XceI RCATGY 2 cut(s) 809, 1372
XmiI GTMKAC 2 cut(s) 944, 1362
XmnI GAANNNNTTC 2 cut(s) 561, 895
XspI CTAG 2 cut(s) 1106, 1167
Zsp2I ATGCAT 1 cut(s) 1279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.