Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001950

Physical Location & Seq

Genomic Coordinates Forward (+)

59897793 .. 59903576

Gene Structure 5784 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020004

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2526 bp

ATGGGTTTGAGGCTTGTAATGTGGAATGTGGTAGCCCTGGTGCTGGTCTTGTGTTCTTGTTTCTCTTTTGTTAAAGCCTCTGTTTCTTATGATTCCAAGTCTATTGTCATCAATGGCCAGAGGAGGATCCTCATTTCTGGATCTATTCACTACCCAAGAAGCACCCCTGAGATGTGGCCAGATCTTATTCAGAAAGCCAAGGAAGGAGGCTTGGATGTGATTCAGACTTATGTTTTCTGGAATGGGCATGAACCTTCACCAGGCAAATACTATTTTGGGGACAACTATGATCTGGTCAAATTTATCAAGCTGGTACAGCAGGCAGGCCTTTATGTTCATCTCAGGATTGGTCCTTATGTTTGTGCAGAGTGGAACTTTGGGGGGTTTCCTGTTTGGCTGAAGTACATTCCTGGTATCCAATTCAGAACAGATAATGGGCCTTTCAAGTATCAAATGCAAAGATTCACTACAAAGATTGTAAACATGATGAAAGCAGAAAGGTTGTTCGAGTCTCACGGTGGTCCAATCATTCTATCCCAGATTGAAAATGAGTATGGACCCATGGAATACGAAATTGGTGCACCAGGTAAAGCCTACACTGACTGGGCAGCTCAAATGGCTGTGGGACTAAACACTGGTGTCCCCTGGGTCATGTGCAAACAAGATGATGCCCCTGATCCTGTTATTAACGCTTGCAATGGCTTCTATTGTGACTACTTCTCTCCAAACAAGGCTTATAAACCAAAGATGTGGACTGAAGCCTGGACTGGATGGTTTACTGAGTTTGGAGGTGCAGTTCCTTACAGACCAGCTGAGGATTTGGCATTTTCAGTTGCGAAGTTTATACAAAAGGGTGGATCATTCATTAACTATTATATGTACCATGGAGGAACAAATTTTGGGCGAACTGCTGGTGGTCCTTTCATCGCTACTAGTTATGATTACGACGCTCCTCTGGATGAATATGGACTGTTGAGGCAACCTAAATGGGGCCATTTGAAAGATTTGCATAGAGCAATAAAGTTGTGCGAACCAGCTCTAGTTTCTAGTGATCCTACTGTAACACCACTTGGACGTTATCAAGAGGCTCATGTATTCAAATCAAATTCTGGAGCTTGTGCCGCATTTCTTGCAAATTACAACCAAAGATCATTTGCAAAAGTGGCATTTGGGAACATGCATTACAACCTGCCTCCTTGGTCTATTAGCATTCTTCCTGACTGCAAGAACACAGTTTATAATACTGCAAGGATTGGTGCGCAAAGTGCACGGATGAAGATGCCCCGTGTTCCTATTCATGGAGGTTTCTCTTGGCAGGCTTACAATGACGAAAGTGCCACGTATAGTGACACTTCATTTACCACGGCCGGATTATTGGAGCAGATAAATACCACTAGAGATGCCACTGATTATTTGTGGTACATGACAGATGTTGAGATTGATCCCAATGAGGACTTTTTAAGAAGTGGAAATTATCCTGTACTCACAGTCTTATCAGCTGGTCATGCTTTGCGCGTTTTCATCAATGGTCAACTTGCAGGAACTGCTTATGGAAGTTTAGAAACCCCAAAACTAACATTTAATCAAGGTGTGAATTTGAGAGCTGGTAGCAACCAAATTGCTCTTCTCAGCATCGCTGTTGGTCTGCCGAACGTTGGGCCACATTTTGAGACATGGAATGCTGGCATTCTGGGCCCAGTCATATTAAATGGTCTTAATGAGGGAAGGAGGGACTTGTCATGGCAGAAATGGTCTTATAAGATTGGGCTTAAAGGAGAAGCTTTGAGTCTTCATTCGCTGAGTGGGAGTTCCTCAGTAGAGTGGACTCAGGGGTCTTTTGTGGCACAAAGGCAGCCTCTTACATGGTACAAAACGACTTTCAATAGACCAGCTGGAAATTCGCCATTGGCTTTAGATATGGGCAGCATGGGCAAAGGCCAAGTATGGATAAATGGCCAGAGTATTGGCCGTTATTGGCCTGCTTATAAAGCATCTGGTACTTGTGGCGAATGTAACTACGCCGGAACATTTAGTGAGAAGAAATGCTTAAGTAACTGTGGGGAGGCTTCCCAGAGATGGTATCATGTTCCTCGTTCATGGCTGAACCCAGCAGGCAATTTGTTGGTTGTGTTAGAAGAGTGGGGTGGCGATCCAAATGGGATATTTTTGGTCAGAAGGGAAGTAGATAGTATATGTGCTGATATTTATGAGTGGCAACCAAATCTTATGAGTTGGCGGATGCAAGTCTCAGGAAGGGTCAGTAAACCTCTAAGGCCTAAAGCTCATTTGTCATGTGGCCCTGGGCAGAAAATCTCCTCAATAAAGTTTGCTAGCTTCGGAACCCCAGTAGGGGTTTGTGGAAGCTTCCGGGAAGGGGGCTGTCATGCTCACAAGTCTTATGATGCTTTTCAAAGGAGTTGCATTGGACAGAACTCATGCTCAGTTACTGTATCACCTGAGAATTTTGGAGGGGATCCATGTCCAAATGTCATGAAGAAACTCTCTGTGGAGGCCATTTGCAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005911 GO:0009505 GO:0009506 GO:0015925 GO:0016787 GO:0016798 GO:0030054 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

842

Amino Acids

93.35

Weight (kDa)

8.53

Isoelectric Point (pI)

37.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	34 - 339	2.8e-121	Glycosyl hydrolases family 35
GHD	PF17834	362 - 418	7.3e-23	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	471 - 538	9.9e-07	Beta-galactosidase, galactose-binding domain
BetaGal_gal-bd	PF21467	620 - 706	4.1e-26	Beta-galactosidase, galactose-binding domain
SUEL_Lectin	PF02140	763 - 840	1.1e-21	D-galactoside/L-rhamnose binding SUEL lectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13750
fragaria_vesca	FvH4_6g33260 FvH4_6g33260 FvH4_6g33260 FvH4_6g33260 FvH4_6g33260
malus_domestica	MD03G1276100.v1.1 MD05G1210900.v1.1 MD09G1193900.v1.1 MD11G1104200.v1.1 MD11G1105200.v1.1 MD15G1317000.v1.1 MD16G1228200.v1.1
prunus_persica	Prupe.3G050200_v2.0.a1
pyrus_communis	pycom09g11040 pycom111g03560 pycom15g12320
rosa_chinensis	RchiOBHm_Chr0c25g0500881 RchiOBHm_Chr1g0331081 RchiOBHm_Chr2g0142961 RchiOBHm_Chr6g0257481 RchiOBHm_Chr6g0266311
rosa_laevigata	RLG00000020004
rosa_multiflora	Rmu_sc0006428.1_g000002 Rmu_sc0008528.1_g000001 Rmu_sc0028483.1_g000003
rosa_roxburghii	Rroxscaffold_1G00030970 Rroxscaffold_2G00102180 Rroxscaffold_7G00183160 Rroxscaffold_7G00216290
rosa_rugosa	Rorug02G0377400
rosa_samantha	Rh2AG100700 Rh2AG430500 Rh2BG138700 Rh2BG439500 Rh2CG416200 Rh2DG449500 Rh4CG196100 Rh5DG216000 Rh6AG145200 Rh6AG372600 Rh6AG422200 Rh6DG373500
rosa_wichuraiana	Rw2G035160 Rw5G019430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	738, 1239, 1758, 1986
AasI	GACNNNNNNGTC	1 cut(s)	1831
Acc16I	TGCGCA	1 cut(s)	1260
Acc36I	ACCTGC	1 cut(s)	1197
AccII	CGCG	1 cut(s)	1515
AciI	CCGC	2 cut(s)	1122, 2236
AclI	AACGTT	1 cut(s)	1653
AcoI	YGGCCR	5 cut(s)	115, 176, 1365, 1954, 1966
AcsI	RAATTY	6 cut(s)	299, 895, 1105, 1594, 1897, 2461
AcuI	CTGAAG	2 cut(s)	419, 777
AfaI	GTAC	7 cut(s)	315, 404, 881, 1421, 1482, 1868, 1999
AfiI	CCNNNNNNNGG	9 cut(s)	43, 260, 989, 1298, 1655, 2076, 2349, 2350, 2374
AflII	CTTAAG	1 cut(s)	2047
AgsI	TTSAA	6 cut(s)	445, 545, 1000, 1099, 1882, 2411
AhlI	ACTAGT	1 cut(s)	932
AjnI	CCWGG	7 cut(s)	36, 259, 409, 583, 644, 761, 2299
AjuI	GAANNNNNNNTTGG	4 cut(s)	558, 590, 1608, 1640
AloI	GAACNNNNNNTCC	2 cut(s)	780, 812
Alw21I	GWGCWC	2 cut(s)	583, 1270
Alw26I	GTCTC	3 cut(s)	516, 1664, 2251
Alw44I	GTGCAC	2 cut(s)	579, 1266
AlwNI	CAGNNNCTG	2 cut(s)	1544, 2447
ApaI	GGGCCC	1 cut(s)	1697
ApaLI	GTGCAC	2 cut(s)	579, 1266
ApeKI	GCWGC	4 cut(s)	608, 1852, 1923, 2520
ApoI	RAATTY	6 cut(s)	299, 895, 1105, 1594, 1897, 2461
AspLEI	GCGC	2 cut(s)	1261, 1515
AsuC2I	CCSGG	1 cut(s)	2369
AsuHPI	GGTGA	2 cut(s)	249, 2445
AsuNHI	GCTAGC	1 cut(s)	2330
AvaII	GGWCC	4 cut(s)	350, 521, 557, 917
BaeGI	GKGCMC	3 cut(s)	583, 1270, 1697
BalI	TGGCCA	3 cut(s)	117, 178, 1956
BamHI	GGATCC	2 cut(s)	126, 2473
BanII	GRGCYC	1 cut(s)	1697
BbsI	GAAGAC	1 cut(s)	1781
Bbv12I	GWGCWC	2 cut(s)	583, 1270
BbvCI	CCTCAGC	1 cut(s)	813
BbvI	GCAGC	3 cut(s)	620, 1864, 1935
BccI	CCATC	2 cut(s)	765, 2070
BceAI	ACGGC	2 cut(s)	1380, 1953
BcgI	CGANNNNNNTGC	2 cut(s)	560, 594
BciT130I	CCWGG	7 cut(s)	38, 261, 411, 585, 646, 763, 2301
BciVI	GTATCC	1 cut(s)	425
BcnI	CCSGG	1 cut(s)	2369
BcoDI	GTCTC	3 cut(s)	516, 1664, 2251
BcuI	ACTAGT	1 cut(s)	932
BfaI	CTAG	5 cut(s)	933, 1040, 1047, 1395, 2331
BfrI	CTTAAG	1 cut(s)	2047
BfuAI	ACCTGC	1 cut(s)	1197
BfuI	GTATCC	1 cut(s)	425
BglII	AGATCT	1 cut(s)	181
BisI	GCNGC	5 cut(s)	609, 1122, 1853, 1924, 2521
BlsI	GCNGC	5 cut(s)	610, 1123, 1854, 1925, 2522
Bme1390I	CCNGG	8 cut(s)	38, 261, 411, 585, 646, 763, 2301, 2369
Bme18I	GGWCC	4 cut(s)	350, 521, 557, 917
BmiI	GGNNCC	6 cut(s)	128, 559, 992, 1695, 2341, 2475
BmrFI	CCNGG	8 cut(s)	38, 261, 411, 585, 646, 763, 2301, 2369
BmrI	ACTGGG	3 cut(s)	613, 1691, 2339
BmsI	GCATC	7 cut(s)	658, 1269, 1390, 1641, 2000, 2229, 2392
BmtI	GCTAGC	1 cut(s)	2334
BmuI	ACTGGG	3 cut(s)	613, 1691, 2339
BpiI	GAAGAC	1 cut(s)	1781
BpmI	CTGGAG	1 cut(s)	1131
Bpu10I	CCTNAGC	1 cut(s)	813
BpuMI	CCSGG	1 cut(s)	2369
BsaAI	YACGTR	1 cut(s)	1341
BsaXI	ACNNNNNCTCC	2 cut(s)	780, 810
Bsc4I	CCNNNNNNNGG	9 cut(s)	43, 260, 989, 1298, 1655, 2076, 2349, 2350, 2374
Bse1I	ACTGG	5 cut(s)	608, 640, 772, 1697, 2345
Bse3DI	GCAATG	1 cut(s)	703
BseBI	CCWGG	7 cut(s)	38, 261, 411, 585, 646, 763, 2301
BseGI	GGATG	5 cut(s)	220, 776, 964, 1278, 2244
BseLI	CCNNNNNNNGG	9 cut(s)	43, 260, 989, 1298, 1655, 2076, 2349, 2350, 2374
BseMI	GCAATG	1 cut(s)	703
BseNI	ACTGG	5 cut(s)	608, 640, 772, 1697, 2345
BseRI	GAGGAG	3 cut(s)	136, 942, 2305
BseSI	GKGCMC	3 cut(s)	583, 1270, 1697
BseX3I	CGGCCG	1 cut(s)	1365
BseXI	GCAGC	3 cut(s)	620, 1864, 1935
BseYI	CCCAGC	1 cut(s)	2107
BsgI	GTGCAG	2 cut(s)	384, 813
Bsh1236I	CGCG	1 cut(s)	1515
Bsh1285I	CGRYCG	1 cut(s)	1368
BsiEI	CGRYCG	1 cut(s)	1368
BsiHKAI	GWGCWC	2 cut(s)	583, 1270
BsiSI	CCGG	3 cut(s)	1368, 2022, 2368
BslFI	GGGAC	4 cut(s)	293, 626, 639, 1745
BslI	CCNNNNNNNGG	9 cut(s)	43, 260, 989, 1298, 1655, 2076, 2349, 2350, 2374
BsmAI	GTCTC	3 cut(s)	516, 1664, 2251
BsmFI	GGGAC	4 cut(s)	293, 626, 639, 1745
BsmI	GAATGC	3 cut(s)	1209, 1684, 1686
Bsp120I	GGGCCC	1 cut(s)	1693
Bsp1286I	GDGCHC	3 cut(s)	583, 1270, 1697
Bsp19I	CCATGG	2 cut(s)	561, 883
BspACI	CCGC	2 cut(s)	1122, 2236
BspFNI	CGCG	1 cut(s)	1515
BspHI	TCATGA	1 cut(s)	2490
BspLI	GGNNCC	6 cut(s)	128, 559, 992, 1695, 2341, 2475
BspMI	ACCTGC	1 cut(s)	1197
BspOI	GCTAGC	1 cut(s)	2334
BspQI	GCTCTTC	1 cut(s)	1629
BspTI	CTTAAG	1 cut(s)	2047
BsrDI	GCAATG	1 cut(s)	703
BsrI	ACTGG	5 cut(s)	608, 640, 772, 1697, 2345
BssT1I	CCWWGG	4 cut(s)	198, 561, 883, 1196
Bst2UI	CCWGG	7 cut(s)	38, 261, 411, 585, 646, 763, 2301
Bst4CI	ACNGT	7 cut(s)	518, 972, 1060, 1234, 1489, 2057, 2449
Bst6I	CTCTTC	2 cut(s)	1629, 2130
BstAFI	CTTAAG	1 cut(s)	2047
BstAPI	GCANNNNNTGC	2 cut(s)	1130, 1544
BstBAI	YACGTR	1 cut(s)	1341
BstC8I	GCNNGC	8 cut(s)	321, 325, 694, 1317, 1684, 1980, 2113, 2332
BstDSI	CCRYGG	3 cut(s)	561, 883, 1362
BstENI	CCTNNNNNAGG	1 cut(s)	258
BstF5I	GGATG	5 cut(s)	220, 776, 964, 1278, 2244
BstFNI	CGCG	1 cut(s)	1515
BstHHI	GCGC	2 cut(s)	1261, 1515
BstMAI	GTCTC	3 cut(s)	516, 1664, 2251
BstMCI	CGRYCG	1 cut(s)	1368
BstNI	CCWGG	7 cut(s)	38, 261, 411, 585, 646, 763, 2301
BstNSI	RCATGY	1 cut(s)	1180
BstSCI	CCNGG	8 cut(s)	36, 259, 409, 583, 644, 761, 2299, 2367
BstSLI	GKGCMC	3 cut(s)	583, 1270, 1697
BstUI	CGCG	1 cut(s)	1515
BstV1I	GCAGC	3 cut(s)	620, 1864, 1935
BstV2I	GAAGAC	1 cut(s)	1781
BstX2I	RGATCY	4 cut(s)	126, 140, 181, 2473
BstXI	CCANNNNNNTGG	2 cut(s)	750, 1964
BstYI	RGATCY	4 cut(s)	126, 140, 181, 2473
BstZI	CGGCCG	1 cut(s)	1365
BsuI	GTATCC	1 cut(s)	425
BtgI	CCRYGG	3 cut(s)	561, 883, 1362
BtgZI	GCGATG	2 cut(s)	910, 1618
BtsCI	GGATG	5 cut(s)	220, 776, 964, 1278, 2244
BtsIMutI	CAGTG	3 cut(s)	597, 633, 1404
BveI	ACCTGC	1 cut(s)	1197
Cac8I	GCNNGC	8 cut(s)	321, 325, 694, 1317, 1684, 1980, 2113, 2332
CaiI	CAGNNNCTG	2 cut(s)	1544, 2447
CciI	TCATGA	1 cut(s)	2490
CfoI	GCGC	2 cut(s)	1261, 1515
CseI	GACGC	1 cut(s)	956
CsiI	ACCWGGT	1 cut(s)	583
Csp6I	GTAC	7 cut(s)	314, 403, 880, 1420, 1481, 1867, 1998
CviQI	GTAC	7 cut(s)	314, 403, 880, 1420, 1481, 1867, 1998
DrdI	GACNNNNNNGTC	1 cut(s)	1831
DseDI	GACNNNNNNGTC	1 cut(s)	1831
EaeI	YGGCCR	5 cut(s)	115, 176, 1365, 1954, 1966
EagI	CGGCCG	1 cut(s)	1365
Eam1104I	CTCTTC	2 cut(s)	1629, 2130
EarI	CTCTTC	2 cut(s)	1629, 2130
EciI	GGCGGA	1 cut(s)	2251
EclXI	CGGCCG	1 cut(s)	1365
Eco130I	CCWWGG	4 cut(s)	198, 561, 883, 1196
Eco147I	AGGCCT	2 cut(s)	327, 2275
Eco24I	GRGCYC	1 cut(s)	1697
Eco47I	GGWCC	4 cut(s)	350, 521, 557, 917
Eco52I	CGGCCG	1 cut(s)	1365
Eco57I	CTGAAG	2 cut(s)	419, 777
EcoNI	CCTNNNNNAGG	1 cut(s)	258
EcoRII	CCWGG	7 cut(s)	36, 259, 409, 583, 644, 761, 2299
EcoT14I	CCWWGG	4 cut(s)	198, 561, 883, 1196
EcoT22I	ATGCAT	1 cut(s)	1182
EcoT38I	GRGCYC	1 cut(s)	1697
ErhI	CCWWGG	4 cut(s)	198, 561, 883, 1196
FalI	AAGNNNNNCTT	2 cut(s)	2030, 2062
FaqI	GGGAC	4 cut(s)	293, 626, 639, 1745
Fnu4HI	GCNGC	5 cut(s)	609, 1122, 1853, 1924, 2521
FokI	GGATG	5 cut(s)	227, 783, 971, 1285, 2251
FriOI	GRGCYC	1 cut(s)	1697
Fsp4HI	GCNGC	5 cut(s)	609, 1122, 1853, 1924, 2521
FspBI	CTAG	5 cut(s)	933, 1040, 1047, 1395, 2331
FspI	TGCGCA	1 cut(s)	1260
GlaI	GCGC	2 cut(s)	1260, 1514
GluI	GCNGC	5 cut(s)	609, 1122, 1853, 1924, 2521
GsaI	CCCAGC	1 cut(s)	2111
GsuI	CTGGAG	1 cut(s)	1131
HapII	CCGG	3 cut(s)	1368, 2022, 2368
HgaI	GACGC	1 cut(s)	956
HhaI	GCGC	2 cut(s)	1261, 1515
Hin6I	GCGC	2 cut(s)	1259, 1513
HinP1I	GCGC	2 cut(s)	1259, 1513
HincII	GTYRAC	1 cut(s)	1532
HindII	GTYRAC	1 cut(s)	1532
HindIII	AAGCTT	2 cut(s)	1779, 2362
HinfI	GANTC	6 cut(s)	92, 220, 462, 509, 1786, 1825
HpaII	CCGG	3 cut(s)	1368, 2022, 2368
HphI	GGTGA	2 cut(s)	249, 2445
Hpy166II	GTNNAC	8 cut(s)	481, 581, 753, 777, 1268, 1532, 1824, 2264
Hpy188I	TCNGA	5 cut(s)	192, 225, 425, 2174, 2339
Hpy188III	TCNNGA	9 cut(s)	138, 238, 343, 956, 1082, 1110, 1217, 2250, 2491
Hpy8I	GTNNAC	8 cut(s)	481, 581, 753, 777, 1268, 1532, 1824, 2264
Hpy99I	CGWCG	1 cut(s)	950
HpyAV	CCTTC	6 cut(s)	197, 264, 1719, 2169, 2247, 2366
HpyCH4III	ACNGT	7 cut(s)	518, 972, 1060, 1234, 1489, 2057, 2449
HpyCH4IV	ACGT	3 cut(s)	1075, 1340, 1653
HpySE526I	ACGT	3 cut(s)	1075, 1340, 1653
HspAI	GCGC	2 cut(s)	1259, 1513
LguI	GCTCTTC	1 cut(s)	1629
LmnI	GCTCC	3 cut(s)	955, 1112, 1378
Lsp1109I	GCAGC	3 cut(s)	620, 1864, 1935
LweI	GCATC	7 cut(s)	658, 1269, 1390, 1641, 2000, 2229, 2392
MabI	ACCWGGT	1 cut(s)	583
MaeI	CTAG	5 cut(s)	933, 1040, 1047, 1395, 2331
MaeII	ACGT	3 cut(s)	1075, 1340, 1653
MaeIII	GTNAC	6 cut(s)	710, 1060, 1346, 2012, 2051, 2443
MboII	GAAGA	7 cut(s)	1205, 1288, 1616, 1781, 2050, 2147, 2506
MflI	RGATCY	4 cut(s)	126, 140, 181, 2473
MhlI	GDGCHC	3 cut(s)	583, 1270, 1697
MlsI	TGGCCA	3 cut(s)	117, 178, 1956
MluNI	TGGCCA	3 cut(s)	117, 178, 1956
MlyI	GAGTC	3 cut(s)	518, 1795, 1819
Mox20I	TGGCCA	3 cut(s)	117, 178, 1956
Mph1103I	ATGCAT	1 cut(s)	1182
MscI	TGGCCA	3 cut(s)	117, 178, 1956
MseI	TTAA	9 cut(s)	72, 687, 867, 1460, 1581, 1706, 1716, 1770, 2048
Msp20I	TGGCCA	3 cut(s)	117, 178, 1956
MspA1I	CMGCKG	3 cut(s)	812, 1499, 1892
MspCI	CTTAAG	1 cut(s)	2047
MspI	CCGG	3 cut(s)	1368, 2022, 2368
MspR9I	CCNGG	8 cut(s)	38, 261, 411, 585, 646, 763, 2301, 2369
Mva1269I	GAATGC	3 cut(s)	1209, 1684, 1686
MvaI	CCWGG	7 cut(s)	38, 261, 411, 585, 646, 763, 2301
MvnI	CGCG	1 cut(s)	1515
NciI	CCSGG	1 cut(s)	2369
NcoI	CCATGG	2 cut(s)	561, 883
NheI	GCTAGC	1 cut(s)	2330
NlaIV	GGNNCC	6 cut(s)	128, 559, 992, 1695, 2341, 2475
NmuCI	GTSAC	2 cut(s)	710, 1346
NsbI	TGCGCA	1 cut(s)	1260
NsiI	ATGCAT	1 cut(s)	1182
NspI	RCATGY	1 cut(s)	1180
PagI	TCATGA	1 cut(s)	2490
PasI	CCCWGGG	2 cut(s)	645, 2300
PceI	AGGCCT	2 cut(s)	327, 2275
PciSI	GCTCTTC	1 cut(s)	1629
PctI	GAATGC	3 cut(s)	1209, 1684, 1686
PfeI	GAWTC	3 cut(s)	92, 220, 462
PfoI	TCCNGGA	1 cut(s)	2367
PkrI	GCNGC	5 cut(s)	610, 1123, 1854, 1925, 2522
PleI	GAGTC	3 cut(s)	517, 1794, 1819
PpsI	GAGTC	3 cut(s)	517, 1794, 1819
Ppu21I	YACGTR	1 cut(s)	1341
PsiI	TTATAA	4 cut(s)	738, 1239, 1758, 1986
Psp1406I	AACGTT	1 cut(s)	1653
Psp6I	CCWGG	7 cut(s)	36, 259, 409, 583, 644, 761, 2299
PspFI	CCCAGC	1 cut(s)	2107
PspGI	CCWGG	7 cut(s)	36, 259, 409, 583, 644, 761, 2299
PspN4I	GGNNCC	6 cut(s)	128, 559, 992, 1695, 2341, 2475
PspOMI	GGGCCC	1 cut(s)	1693
PsrI	GAACNNNNNNTAC	2 cut(s)	1166, 1198
PstNI	CAGNNNCTG	2 cut(s)	1544, 2447
PsuI	RGATCY	4 cut(s)	126, 140, 181, 2473
PvuII	CAGCTG	3 cut(s)	812, 1499, 1892
RsaI	GTAC	7 cut(s)	315, 404, 881, 1421, 1482, 1868, 1999
RsaNI	GTAC	7 cut(s)	314, 403, 880, 1420, 1481, 1867, 1998
SapI	GCTCTTC	1 cut(s)	1629
SaqAI	TTAA	9 cut(s)	72, 687, 867, 1460, 1581, 1706, 1716, 1770, 2048
SatI	GCNGC	5 cut(s)	609, 1122, 1853, 1924, 2521
SchI	GAGTC	3 cut(s)	518, 1795, 1819
ScrFI	CCNGG	8 cut(s)	38, 261, 411, 585, 646, 763, 2301, 2369
SduI	GDGCHC	3 cut(s)	583, 1270, 1697
SexAI	ACCWGGT	1 cut(s)	583
SfaNI	GCATC	7 cut(s)	658, 1269, 1390, 1641, 2000, 2229, 2392
SinI	GGWCC	4 cut(s)	350, 521, 557, 917
SmlI	CTYRAG	1 cut(s)	2047
SmoI	CTYRAG	1 cut(s)	2047
SpeI	ACTAGT	1 cut(s)	932
SseBI	AGGCCT	2 cut(s)	327, 2275
SsiI	CCGC	2 cut(s)	1122, 2236
SspMI	CTAG	5 cut(s)	933, 1040, 1047, 1395, 2331
StuI	AGGCCT	2 cut(s)	327, 2275
StyD4I	CCNGG	8 cut(s)	36, 259, 409, 583, 644, 761, 2299, 2367
StyI	CCWWGG	4 cut(s)	198, 561, 883, 1196
TaaI	ACNGT	7 cut(s)	518, 972, 1060, 1234, 1489, 2057, 2449
TaiI	ACGT	3 cut(s)	1078, 1343, 1656
TaqI	TCGA	1 cut(s)	507
TatI	WGTACW	2 cut(s)	402, 1480
TauI	GCSGC	1 cut(s)	1124
TfiI	GAWTC	3 cut(s)	92, 220, 462
Tru1I	TTAA	9 cut(s)	72, 687, 867, 1460, 1581, 1706, 1716, 1770, 2048
Tru9I	TTAA	9 cut(s)	72, 687, 867, 1460, 1581, 1706, 1716, 1770, 2048
TscAI	CASTG	3 cut(s)	604, 640, 1411
TseFI	GTSAC	2 cut(s)	710, 1346
TseI	GCWGC	4 cut(s)	608, 1852, 1923, 2520
Tsp45I	GTSAC	2 cut(s)	710, 1346
TspGWI	ACGGA	1 cut(s)	1285
TspRI	CASTG	3 cut(s)	604, 640, 1411
Vha464I	CTTAAG	1 cut(s)	2047
VneI	GTGCAC	2 cut(s)	579, 1266
VpaK11BI	GGWCC	4 cut(s)	350, 521, 557, 917
XagI	CCTNNNNNAGG	1 cut(s)	258
XapI	RAATTY	6 cut(s)	299, 895, 1105, 1594, 1897, 2461
XceI	RCATGY	1 cut(s)	1180
XspI	CTAG	5 cut(s)	933, 1040, 1047, 1395, 2331
Zsp2I	ATGCAT	1 cut(s)	1182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.