Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0001950

Physical Location & Seq

Genomic Coordinates Forward (+)

41884678 .. 41895743

Gene Structure 11066 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG196100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGCTCCGGCTCCGATGCCTCCTTCTCTGCCTCACTATCCACTTCGCCGCGGTTGCCGCTGCGTTCTTCAAGCCGTTCAACGTCAGCTACGACCACCGCGCCCTCATCATCGATGGCAACCGCCGGATGCTCATCTCCGCCGGCATCCACTACCCTCGCGCCACTCCCCAGATGTGGCCTGATTTGATTGCAAAGAGCAAGGAAGGTGGGGCGGATGTGATCCAGACCTATGCATTTTGGAGCGGTCACGAGCCGCAGAGAGGACAGTACTATTTTGAAGGGAGATATGATATCGTCAAGTTTGTGAAGTTAGTGGGAGCTAGTGGACTCTATCTCCATCTTCGCATAGGGCCTTACGTCTGCGCTGAGTGGAACTTTGGTGGCTTCCCGGTGTGGTTGCGGGACATACCTGGAATAGAATTCCGAACAAACAATGCACCTTTTAAGGAAGAGATGCAGCGGTTTGTTAAAAAGATGGTGGATCTGATGCAAGAGGAAGAGCTGTTTTGTTGGCAAGGTGGTCCAGTAATTATGCTACAGGTTGATCTACATGCTGCTATAAAGCTGTGTGAGCCTGCTCTTGTTGCTGCTGATTCACCGGATTACATTAAATTGGGACCAAAACAGGAGAACTATGGTGCTTTCCTTGAGAAAGATGGGGCAGGATTTAGAGGACATGTCAAACTGACTGGGTTTAAAAATGGGGATATCGACCTCTCAACATTGTTATGGACTTACCAGGTTGGGCTTAAAGGAGAGTTTTTCAAAATATACACCGTAGAAGAAAATGAGAAGGCAGGTTGGGCTGAGTTGTCACTAGATGCTGATCCATCCACTTTTACCTGGTACAAGACATACTTTGATAGCCCTGCTGGCACAGATCCAGTGGCTCTAAATTTAGGAAGCATGGGAAAGGGCCAGGCTTGGGTCAATGGCCACCATATAGGAAGGTATTGGACACTTGTTGCTCCAAAAGATGGATGCCAAGAAATCTGTGATTATCGAGGGGCATACAACTCCGATAAGTGCACAACAAATTGTGGGAAGCCTACTCAAACCTGGTACCATATTCCACGGTCATGGTTGCAGGCTTCAAGTAATTTACTTGTTATCTTTGAGGAAATTGGAGGGAATCCATTTGAGATTTCAATCAACTCGCGTGCAGTTGGAACCATCTGTGCTCAAGTGTCAGAATCTCACTACCCACCTGTCCAGAAGTGGTTCAGTCCAGATTTTATTGATGAAAAAGGCAGAGTAAATGATCGGACACCAGAAATTCACTTGCAATGTCAAGACGGGTTTATAATATCTTCCATAGAATTTGCTAGCTATGGAAGTCCTCAAGGTCGTTGCCAGAAGTTTTCTCAAGGGAATTGCCACGCTTCGAATTCTTTCTCCATAGTTTCCGAGGCTTGCCTGGGAAAGAATAGCTGTTCAGTCGGAGTATCAAATCTTGTATTTGGAGATGACCCATGCTGGGGTATTGTTAAGACGTTGGCTGTTGAGGCAAGATGCAGGTCACTACCAACCGTTGGTTTTTCTCAGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0009505 GO:0015925 GO:0016020 GO:0016787 GO:0016798 GO:0030312 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

516

Amino Acids

57.73

Weight (kDa)

6.24

Isoelectric Point (pI)

36.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	35 - 192	6.6e-63	Glycosyl hydrolases family 35
BetaGal_gal-bd	PF21467	281 - 367	7e-26	Beta-galactosidase, galactose-binding domain
SUEL_Lectin	PF02140	428 - 505	1.2e-22	D-galactoside/L-rhamnose binding SUEL lectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13750
fragaria_vesca	FvH4_6g33260 FvH4_6g33260 FvH4_6g33260 FvH4_6g33260 FvH4_6g33260
malus_domestica	MD03G1276100.v1.1 MD05G1210900.v1.1 MD09G1193900.v1.1 MD11G1104200.v1.1 MD11G1105200.v1.1 MD15G1317000.v1.1 MD16G1228200.v1.1
prunus_persica	Prupe.3G050200_v2.0.a1
pyrus_communis	pycom09g11040 pycom111g03560 pycom15g12320
rosa_chinensis	RchiOBHm_Chr0c25g0500881 RchiOBHm_Chr1g0331081 RchiOBHm_Chr2g0142961 RchiOBHm_Chr6g0257481 RchiOBHm_Chr6g0266311
rosa_laevigata	RLG00000020004
rosa_multiflora	Rmu_sc0006428.1_g000002 Rmu_sc0008528.1_g000001 Rmu_sc0028483.1_g000003
rosa_roxburghii	Rroxscaffold_1G00030970 Rroxscaffold_2G00102180 Rroxscaffold_7G00183160 Rroxscaffold_7G00216290
rosa_rugosa	Rorug02G0377400
rosa_samantha	Rh2AG100700 Rh2AG430500 Rh2BG138700 Rh2BG439500 Rh2CG416200 Rh2DG449500 Rh4CG196100 Rh5DG216000 Rh6AG145200 Rh6AG372600 Rh6AG422200 Rh6DG373500
rosa_wichuraiana	Rw2G035160 Rw5G019430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1304
Acc36I	ACCTGC	2 cut(s)	788, 1506
Acc65I	GGTACC	1 cut(s)	1062
AccB1I	GGYRCC	1 cut(s)	1062
AccB7I	CCANNNNNTGG	2 cut(s)	977, 1532
AccBSI	CCGCTC	1 cut(s)	243
AccII	CGCG	4 cut(s)	50, 99, 159, 1159
AclWI	GGATC	4 cut(s)	214, 489, 821, 875
AcoI	YGGCCR	1 cut(s)	934
AcsI	RAATTY	5 cut(s)	419, 895, 1275, 1319, 1387
AfaI	GTAC	3 cut(s)	269, 848, 1064
AfiI	CCNNNNNNNGG	7 cut(s)	174, 260, 925, 977, 1477, 1478, 1532
AflIII	ACRYGT	1 cut(s)	676
AgsI	TTSAA	6 cut(s)	70, 79, 278, 766, 1095, 1149
AjnI	CCWGG	6 cut(s)	409, 738, 842, 918, 1058, 1416
AluBI	AGCT	7 cut(s)	87, 320, 502, 565, 1329, 1431, 1546
AluI	AGCT	7 cut(s)	87, 320, 502, 565, 1329, 1431, 1546
Alw21I	GWGCWC	2 cut(s)	1031, 1183
Alw44I	GTGCAC	1 cut(s)	1027
AlwI	GGATC	4 cut(s)	214, 489, 821, 875
AoxI	GGCC	4 cut(s)	176, 350, 916, 934
ApaLI	GTGCAC	1 cut(s)	1027
ApeKI	GCWGC	4 cut(s)	59, 457, 554, 587
ApoI	RAATTY	5 cut(s)	419, 895, 1275, 1319, 1387
Asp700I	GAANNNNTTC	2 cut(s)	1220, 1391
Asp718I	GGTACC	1 cut(s)	1062
AspLEI	GCGC	3 cut(s)	101, 161, 365
AspS9I	GGNCC	4 cut(s)	350, 521, 617, 916
AsuC2I	CCSGG	1 cut(s)	389
AsuHPI	GGTGA	1 cut(s)	588
AsuII	TTCGAA	1 cut(s)	1385
AsuNHI	GCTAGC	1 cut(s)	1325
AvaII	GGWCC	2 cut(s)	521, 617
BaeGI	GKGCMC	1 cut(s)	1031
BalI	TGGCCA	1 cut(s)	936
BanI	GGYRCC	1 cut(s)	1062
BauI	CACGAG	1 cut(s)	248
Bbv12I	GWGCWC	2 cut(s)	1031, 1183
BbvI	GCAGC	4 cut(s)	46, 469, 541, 574
BccI	CCATC	7 cut(s)	107, 345, 469, 650, 838, 971, 1181
BceAI	ACGGC	1 cut(s)	58
BciT130I	CCWGG	6 cut(s)	411, 740, 844, 920, 1060, 1418
BcnI	CCSGG	1 cut(s)	389
BfaI	CTAG	3 cut(s)	321, 818, 1326
BfmI	CTRYAG	1 cut(s)	536
BfuAI	ACCTGC	2 cut(s)	788, 1506
BglI	GCCNNNNNGGC	1 cut(s)	873
BisI	GCNGC	7 cut(s)	48, 57, 60, 254, 458, 555, 588
BlsI	GCNGC	7 cut(s)	49, 58, 61, 255, 459, 556, 589
BmcAI	AGTACT	1 cut(s)	269
Bme1390I	CCNGG	7 cut(s)	389, 411, 740, 844, 920, 1060, 1418
Bme18I	GGWCC	2 cut(s)	521, 617
BmgT120I	GGNCC	4 cut(s)	350, 521, 617, 916
BmiI	GGNNCC	4 cut(s)	11, 618, 1064, 1171
BmrFI	CCNGG	7 cut(s)	389, 411, 740, 844, 920, 1060, 1418
BmrI	ACTGGG	1 cut(s)	699
BmsI	GCATC	8 cut(s)	5, 117, 153, 444, 477, 811, 971, 1502
BmtI	GCTAGC	1 cut(s)	1329
BmuI	ACTGGG	1 cut(s)	699
Bpu14I	TTCGAA	1 cut(s)	1385
BpuEI	CTTGAG	4 cut(s)	668, 1167, 1326, 1350
BpuMI	CCSGG	1 cut(s)	389
Bsa29I	ATCGAT	1 cut(s)	111
BsaBI	GATNNNNATC	3 cut(s)	131, 825, 1148
BsaJI	CCNNGG	4 cut(s)	48, 1073, 1407, 1417
BsaWI	WCCGGW	1 cut(s)	598
BsaXI	ACNNNNNCTCC	2 cut(s)	318, 348
Bsc4I	CCNNNNNNNGG	7 cut(s)	174, 260, 925, 977, 1477, 1478, 1532
Bse118I	RCCGGY	1 cut(s)	140
Bse1I	ACTGG	3 cut(s)	524, 694, 884
Bse3DI	GCAATG	1 cut(s)	1292
Bse8I	GATNNNNATC	3 cut(s)	131, 825, 1148
BseBI	CCWGG	6 cut(s)	411, 740, 844, 920, 1060, 1418
BseCI	ATCGAT	1 cut(s)	111
BseDI	CCNNGG	4 cut(s)	48, 1073, 1407, 1417
BseGI	GGATG	5 cut(s)	132, 144, 220, 830, 986
BseJI	GATNNNNATC	3 cut(s)	131, 825, 1148
BseLI	CCNNNNNNNGG	7 cut(s)	174, 260, 925, 977, 1477, 1478, 1532
BseMI	GCAATG	1 cut(s)	1292
BseMII	CTCAG	2 cut(s)	357, 798
BseNI	ACTGG	3 cut(s)	524, 694, 884
BseSI	GKGCMC	1 cut(s)	1031
BseXI	GCAGC	4 cut(s)	46, 469, 541, 574
BseYI	CCCAGC	1 cut(s)	1476
BsgI	GTGCAG	1 cut(s)	1182
Bsh1236I	CGCG	4 cut(s)	50, 99, 159, 1159
BshFI	GGCC	4 cut(s)	178, 352, 918, 936
BshNI	GGYRCC	1 cut(s)	1062
BshVI	ATCGAT	1 cut(s)	111
BsiHKAI	GWGCWC	2 cut(s)	1031, 1183
BsiSI	CCGG	5 cut(s)	7, 124, 141, 389, 599
BslFI	GGGAC	2 cut(s)	416, 630
BslI	CCNNNNNNNGG	7 cut(s)	174, 260, 925, 977, 1477, 1478, 1532
BsmFI	GGGAC	2 cut(s)	416, 630
BsnI	GGCC	4 cut(s)	178, 352, 918, 936
Bsp119I	TTCGAA	1 cut(s)	1385
Bsp1286I	GDGCHC	2 cut(s)	1031, 1183
Bsp143I	GATC	6 cut(s)	219, 481, 544, 826, 880, 1261
BspANI	GGCC	4 cut(s)	178, 352, 918, 936
BspCNI	CTCAG	2 cut(s)	358, 799
BspDI	ATCGAT	1 cut(s)	111
BspFNI	CGCG	4 cut(s)	50, 99, 159, 1159
BspLI	GGNNCC	4 cut(s)	11, 618, 1064, 1171
BspMI	ACCTGC	2 cut(s)	788, 1506
BspOI	GCTAGC	1 cut(s)	1329
BspPI	GGATC	4 cut(s)	214, 489, 821, 875
BspQI	GCTCTTC	1 cut(s)	492
BspT104I	TTCGAA	1 cut(s)	1385
BspT107I	GGYRCC	1 cut(s)	1062
BsrBI	CCGCTC	1 cut(s)	243
BsrDI	GCAATG	1 cut(s)	1292
BsrFI	RCCGGY	1 cut(s)	140
BsrI	ACTGG	3 cut(s)	524, 694, 884
BssAI	RCCGGY	1 cut(s)	140
BssECI	CCNNGG	4 cut(s)	48, 1073, 1407, 1417
BssMI	GATC	6 cut(s)	219, 481, 544, 826, 880, 1261
BssSI	CACGAG	1 cut(s)	248
Bst2BI	CACGAG	1 cut(s)	248
Bst2UI	CCWGG	6 cut(s)	411, 740, 844, 920, 1060, 1418
Bst4CI	ACNGT	4 cut(s)	267, 778, 1077, 1531
Bst6I	CTCTTC	2 cut(s)	444, 492
BstBI	TTCGAA	1 cut(s)	1385
BstC8I	GCNNGC	7 cut(s)	142, 576, 874, 1089, 1161, 1327, 1414
BstDEI	CTNAG	3 cut(s)	366, 807, 1542
BstDSI	CCRYGG	2 cut(s)	48, 1073
BstF5I	GGATG	5 cut(s)	132, 144, 220, 830, 986
BstFNI	CGCG	4 cut(s)	50, 99, 159, 1159
BstHHI	GCGC	3 cut(s)	101, 161, 365
BstKTI	GATC	6 cut(s)	222, 484, 547, 829, 883, 1264
BstMBI	GATC	6 cut(s)	219, 481, 544, 826, 880, 1261
BstMWI	GCNNNNNNNGC	7 cut(s)	53, 56, 571, 584, 803, 873, 1505
BstNI	CCWGG	6 cut(s)	411, 740, 844, 920, 1060, 1418
BstNSI	RCATGY	2 cut(s)	554, 680
BstSCI	CCNGG	7 cut(s)	387, 409, 738, 842, 918, 1058, 1416
BstSFI	CTRYAG	1 cut(s)	536
BstSLI	GKGCMC	1 cut(s)	1031
BstUI	CGCG	4 cut(s)	50, 99, 159, 1159
BstV1I	GCAGC	4 cut(s)	46, 469, 541, 574
BstX2I	RGATCY	2 cut(s)	481, 880
BstXI	CCANNNNNNTGG	1 cut(s)	1080
BstYI	RGATCY	2 cut(s)	481, 880
Bsu15I	ATCGAT	1 cut(s)	111
BsuRI	GGCC	4 cut(s)	178, 352, 918, 936
BsuTUI	ATCGAT	1 cut(s)	111
BtgI	CCRYGG	2 cut(s)	48, 1073
BtsCI	GGATG	5 cut(s)	132, 144, 220, 830, 986
BtsIMutI	CAGTG	1 cut(s)	891
BveI	ACCTGC	2 cut(s)	788, 1506
Cac8I	GCNNGC	7 cut(s)	142, 576, 874, 1089, 1161, 1327, 1414
CfoI	GCGC	3 cut(s)	101, 161, 365
Cfr10I	RCCGGY	1 cut(s)	140
Cfr13I	GGNCC	4 cut(s)	350, 521, 617, 916
Cfr42I	CCGCGG	1 cut(s)	51
ClaI	ATCGAT	1 cut(s)	111
CsiI	ACCWGGT	3 cut(s)	738, 842, 1058
Csp6I	GTAC	3 cut(s)	268, 847, 1063
CspCI	CAANNNNNGTGG	2 cut(s)	187, 222
CviAII	CATG	5 cut(s)	551, 677, 907, 1080, 1473
CviQI	GTAC	3 cut(s)	268, 847, 1063
DdeI	CTNAG	3 cut(s)	366, 807, 1542
DpnI	GATC	6 cut(s)	221, 483, 546, 828, 882, 1263
DpnII	GATC	6 cut(s)	219, 481, 544, 826, 880, 1261
DraI	TTTAAA	1 cut(s)	697
EaeI	YGGCCR	1 cut(s)	934
Eam1104I	CTCTTC	2 cut(s)	444, 492
EarI	CTCTTC	2 cut(s)	444, 492
EciI	GGCGGA	2 cut(s)	127, 227
Eco32I	GATATC	2 cut(s)	292, 709
Eco47I	GGWCC	2 cut(s)	521, 617
EcoO109I	RGGNCCY	1 cut(s)	350
EcoRI	GAATTC	2 cut(s)	419, 1387
EcoRII	CCWGG	6 cut(s)	409, 738, 842, 918, 1058, 1416
EcoRV	GATATC	2 cut(s)	292, 709
EcoT22I	ATGCAT	1 cut(s)	235
FaeI	CATG	5 cut(s)	554, 680, 910, 1083, 1476
FalI	AAGNNNNNCTT	2 cut(s)	842, 874
FaqI	GGGAC	2 cut(s)	416, 630
FatI	CATG	5 cut(s)	550, 676, 906, 1079, 1472
FauI	CCCGC	1 cut(s)	393
Fnu4HI	GCNGC	7 cut(s)	48, 57, 60, 254, 458, 555, 588
FokI	GGATG	5 cut(s)	131, 139, 227, 817, 993
Fsp4HI	GCNGC	7 cut(s)	48, 57, 60, 254, 458, 555, 588
FspBI	CTAG	3 cut(s)	321, 818, 1326
GlaI	GCGC	3 cut(s)	100, 160, 364
GluI	GCNGC	7 cut(s)	48, 57, 60, 254, 458, 555, 588
GsaI	CCCAGC	1 cut(s)	1480
HaeIII	GGCC	4 cut(s)	178, 352, 918, 936
HapII	CCGG	5 cut(s)	7, 124, 141, 389, 599
HhaI	GCGC	3 cut(s)	101, 161, 365
Hin1II	CATG	5 cut(s)	554, 680, 910, 1083, 1476
Hin6I	GCGC	3 cut(s)	99, 159, 363
HinP1I	GCGC	3 cut(s)	99, 159, 363
HinfI	GANTC	4 cut(s)	327, 593, 1132, 1193
HpaII	CCGG	5 cut(s)	7, 124, 141, 389, 599
HphI	GGTGA	1 cut(s)	588
Hpy166II	GTNNAC	2 cut(s)	326, 1029
Hpy188I	TCNGA	9 cut(s)	14, 425, 486, 1021, 1192, 1266, 1408, 1442, 1550
Hpy188III	TCNNGA	5 cut(s)	223, 248, 1213, 1229, 1292
Hpy8I	GTNNAC	2 cut(s)	326, 1029
HpyAV	CCTTC	5 cut(s)	32, 197, 272, 787, 942
HpyCH4III	ACNGT	4 cut(s)	267, 778, 1077, 1531
HpyCH4IV	ACGT	3 cut(s)	81, 357, 1493
HpyF10VI	GCNNNNNNNGC	7 cut(s)	53, 56, 571, 584, 803, 873, 1505
HpyF3I	CTNAG	3 cut(s)	366, 807, 1542
HpySE526I	ACGT	3 cut(s)	81, 357, 1493
Hsp92II	CATG	5 cut(s)	554, 680, 910, 1083, 1476
HspAI	GCGC	3 cut(s)	99, 159, 363
KpnI	GGTACC	1 cut(s)	1066
KroI	GCCGGC	1 cut(s)	140
KroNI	GCCGGC	1 cut(s)	142
KspI	CCGCGG	1 cut(s)	51
Kzo9I	GATC	6 cut(s)	219, 481, 544, 826, 880, 1261
LguI	GCTCTTC	1 cut(s)	492
LmnI	GCTCC	5 cut(s)	9, 15, 240, 317, 973
Lsp1109I	GCAGC	4 cut(s)	46, 469, 541, 574
LweI	GCATC	8 cut(s)	5, 117, 153, 444, 477, 811, 971, 1502
MabI	ACCWGGT	3 cut(s)	738, 842, 1058
MaeI	CTAG	3 cut(s)	321, 818, 1326
MaeII	ACGT	3 cut(s)	81, 357, 1493
MaeIII	GTNAC	3 cut(s)	245, 813, 1518
MalI	GATC	6 cut(s)	221, 483, 546, 828, 882, 1263
MbiI	CCGCTC	1 cut(s)	243
MboI	GATC	6 cut(s)	219, 481, 544, 826, 880, 1261
MboII	GAAGA	6 cut(s)	58, 332, 461, 509, 794, 1302
MflI	RGATCY	2 cut(s)	481, 880
MhlI	GDGCHC	2 cut(s)	1031, 1183
MlsI	TGGCCA	1 cut(s)	936
MluNI	TGGCCA	1 cut(s)	936
MlyI	GAGTC	1 cut(s)	321
MmeI	TCCRAC	2 cut(s)	1147, 1420
Mox20I	TGGCCA	1 cut(s)	936
Mph1103I	ATGCAT	1 cut(s)	235
MroNI	GCCGGC	1 cut(s)	140
MroXI	GAANNNNTTC	2 cut(s)	1220, 1391
MscI	TGGCCA	1 cut(s)	936
MseI	TTAA	6 cut(s)	444, 468, 609, 696, 750, 1488
MslI	CAYNNNNRTG	2 cut(s)	727, 1078
Msp20I	TGGCCA	1 cut(s)	936
MspA1I	CMGCKG	3 cut(s)	50, 59, 460
MspI	CCGG	5 cut(s)	7, 124, 141, 389, 599
MspR9I	CCNGG	7 cut(s)	389, 411, 740, 844, 920, 1060, 1418
MvaI	CCWGG	6 cut(s)	411, 740, 844, 920, 1060, 1418
MvnI	CGCG	4 cut(s)	50, 99, 159, 1159
MwoI	GCNNNNNNNGC	7 cut(s)	53, 56, 571, 584, 803, 873, 1505
NaeI	GCCGGC	1 cut(s)	142
NciI	CCSGG	1 cut(s)	389
NdeII	GATC	6 cut(s)	219, 481, 544, 826, 880, 1261
NgoMIV	GCCGGC	1 cut(s)	140
NheI	GCTAGC	1 cut(s)	1325
NlaIII	CATG	5 cut(s)	554, 680, 910, 1083, 1476
NlaIV	GGNNCC	4 cut(s)	11, 618, 1064, 1171
NmuCI	GTSAC	3 cut(s)	245, 813, 1518
NsiI	ATGCAT	1 cut(s)	235
NspI	RCATGY	2 cut(s)	554, 680
NspV	TTCGAA	1 cut(s)	1385
PciI	ACATGT	1 cut(s)	676
PciSI	GCTCTTC	1 cut(s)	492
PcsI	WCGNNNNNNNCGW	1 cut(s)	87
PdiI	GCCGGC	1 cut(s)	142
PdmI	GAANNNNTTC	2 cut(s)	1220, 1391
PfeI	GAWTC	3 cut(s)	593, 1132, 1193
PflMI	CCANNNNNTGG	2 cut(s)	977, 1532
PkrI	GCNGC	7 cut(s)	49, 58, 61, 255, 459, 556, 589
PleI	GAGTC	1 cut(s)	321
PpsI	GAGTC	1 cut(s)	321
PscI	ACATGT	1 cut(s)	676
PsiI	TTATAA	1 cut(s)	1304
Psp6I	CCWGG	6 cut(s)	409, 738, 842, 918, 1058, 1416
PspFI	CCCAGC	1 cut(s)	1476
PspGI	CCWGG	6 cut(s)	409, 738, 842, 918, 1058, 1416
PspN4I	GGNNCC	4 cut(s)	11, 618, 1064, 1171
PspPI	GGNCC	4 cut(s)	350, 521, 617, 916
PsuI	RGATCY	2 cut(s)	481, 880
RsaI	GTAC	3 cut(s)	269, 848, 1064
RsaNI	GTAC	3 cut(s)	268, 847, 1063
RseI	CAYNNNNRTG	2 cut(s)	727, 1078
SacII	CCGCGG	1 cut(s)	51
SapI	GCTCTTC	1 cut(s)	492
SaqAI	TTAA	6 cut(s)	444, 468, 609, 696, 750, 1488
SatI	GCNGC	7 cut(s)	48, 57, 60, 254, 458, 555, 588
Sau3AI	GATC	6 cut(s)	219, 481, 544, 826, 880, 1261
Sau96I	GGNCC	4 cut(s)	350, 521, 617, 916
ScaI	AGTACT	1 cut(s)	269
SchI	GAGTC	1 cut(s)	321
ScrFI	CCNGG	7 cut(s)	389, 411, 740, 844, 920, 1060, 1418
SduI	GDGCHC	2 cut(s)	1031, 1183
SexAI	ACCWGGT	3 cut(s)	738, 842, 1058
SfaNI	GCATC	8 cut(s)	5, 117, 153, 444, 477, 811, 971, 1502
SfcI	CTRYAG	1 cut(s)	536
Sfr303I	CCGCGG	1 cut(s)	51
SfuI	TTCGAA	1 cut(s)	1385
SgrBI	CCGCGG	1 cut(s)	51
SinI	GGWCC	2 cut(s)	521, 617
SmiMI	CAYNNNNRTG	2 cut(s)	727, 1078
SmlI	CTYRAG	4 cut(s)	647, 1182, 1341, 1365
SmoI	CTYRAG	4 cut(s)	647, 1182, 1341, 1365
SspMI	CTAG	3 cut(s)	321, 818, 1326
StyD4I	CCNGG	7 cut(s)	387, 409, 738, 842, 918, 1058, 1416
TaaI	ACNGT	4 cut(s)	267, 778, 1077, 1531
TaiI	ACGT	3 cut(s)	84, 360, 1496
TaqI	TCGA	4 cut(s)	111, 711, 1003, 1385
TatI	WGTACW	1 cut(s)	267
TauI	GCSGC	3 cut(s)	50, 59, 256
TfiI	GAWTC	3 cut(s)	593, 1132, 1193
Tru1I	TTAA	6 cut(s)	444, 468, 609, 696, 750, 1488
Tru9I	TTAA	6 cut(s)	444, 468, 609, 696, 750, 1488
TscAI	CASTG	1 cut(s)	891
TseFI	GTSAC	3 cut(s)	245, 813, 1518
TseI	GCWGC	4 cut(s)	59, 457, 554, 587
Tsp45I	GTSAC	3 cut(s)	245, 813, 1518
TspDTI	ATGAA	1 cut(s)	1257
TspRI	CASTG	1 cut(s)	891
Van91I	CCANNNNNTGG	2 cut(s)	977, 1532
VneI	GTGCAC	1 cut(s)	1027
VpaK11BI	GGWCC	2 cut(s)	521, 617
XapI	RAATTY	5 cut(s)	419, 895, 1275, 1319, 1387
XceI	RCATGY	2 cut(s)	554, 680
XmnI	GAANNNNTTC	2 cut(s)	1220, 1391
XspI	CTAG	3 cut(s)	321, 818, 1326
ZrmI	AGTACT	1 cut(s)	269
Zsp2I	ATGCAT	1 cut(s)	235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.