RLG00000035715

Belongs to the actin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000536
Physical Location & Seq
Forward (+)
70732551 .. 70739641
7091 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035715

Sequence Viewer

Length: 1491 bp
ATGGACTGTGATTCATGGAGCACTCCTCTTTGCACCGCCTCAAAGCCTTACCAATCCGCTCTTCAATCTTGTGAAGCTGCAAGGTTTGACTTGTCGCCGGCTCCCCGTCTTCCTGTTGCAGGAGAAGGCACTGGTGCAGCTTCTCGATCTACGACACTTCGCGCGGAGCATTTGGATTTGGAGGCTCTCTTCGCCGTCGCCGTCGCCATCACTGGACTTCTTAAAAACCCACCTCAAGATAACAAAGAACAAAAACGGTTCGGACATCATGGCGCGAGATCGGAGTGCCTTCTTCTTCTTCCTCCTCCTCTCACCCCAAAATTTCAAGTTGATACATCTCTACGACTAGTAATACAAATGGCCGAGGCTGAGGACATTCAACCACTTGTCTGTGACAATGGGACTGGGATGGTTAAGGCTGGATTTGCTGGAGATGATGCTCCAAGGGCTGTATTTCCAAGCATTGTTGGCCGCCCACGTCACACTGGTGTGATGGTTGGCATGGGTCAAAAGGATGCATATGTTGGAGACGAGGCTCAGTCTAAGCGTGGTATCTTGACCCTGAAATACCCCATTGAACATGGTATTGTGAGCAACTGGGATGATATGGAGAAAATTTGGCATCATACTTTCTACAATGAACTTCGTGTTGCCCCAGAAGAACATCCAGTTCTACTCACAGAAGCACCTCTGAACCCAAAGGCCAATCGTGAGAAAATGACCCAAATCATGTTTGAGACATTCAACACTCCTGCCATGTATGTCGCCATCCAGGCTGTTCTTTCCCTCTATGCCAGTGGTCGTACAACTGGTATTGTCCTGGACTCTGGAGATGGTGTCAGCCACACTGTTCCCATCTATGAGGGGTATGCTCTCCCACATGCCATTCTCCGTCTTGACTTAGCAGGTCGGGACCTCACTGATGCTCTTATGAAAATCTTGACTGAGCGTGGCTATTCCTTCACCACCACAGCTGAGCGAGAAATAGTCAGGGACATGAAGGAGAAGCTTGCATATCTTGCTCTTGACTATGAGCAGGAGCTTGAAACTGCTAAGACAAGTTCTTCAGTTGAGAAAAGCTATGAATTGCCTGATGGACAGGTGATCACCATCGGTGCTGAGCGATTCCGTTGCCCAGAAGTACTTTTCCAACCATCTATGATTGGAATGGAAGCTGCAGGCATTCATGAGACTACATACAACTCTATCATGAAGTGTGATGTCGATATCAGGAAGGATTTGTATGGAAACATTGTTCTCAGTGGTGGGTCTACCATGTTCCCTGGCATTGCTGACAGAATGAGCAAGGAAATCACGGCTTTGGCACCAAGCAGCATGAAAATCAAGGTTGTTGCTCCACCTGAGAGGAAGTACAGTGTCTGGATTGGTGGATCCATCCTCGCATCTCTAAGCACTTTCCAGCAGATGTGGATCGCAAAGGCAGAGTATGATGAATCTGGTCCATCAATTGTACACAGGAAGTGTTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Actin

Protein Analysis

497

Amino Acids

54.5

Weight (kDa)

5.56

Isoelectric Point (pI)

42.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Actin PF00022 124 - 496 2.9e-145 Actin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000536)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37620 AT2G37620 AT2G37620 AT2G37620 AT3G46520 AT3G46520 AT3G53750 AT3G53750 AT5G59370 AT5G59370
fragaria_vesca FvH4_3g35960 FvH4_6g13940 FvH4_6g22300 FvH4_6g22300 FvH4_6g22300 FvH4_6g22300 FvH4_7g22410 FvH4_7g22410 FvH4_7g22410
malus_domestica MD03G1095300.v1.1 MD04G1127400.v1.1 MD11G1110300.v1.1 MD12G1056900.v1.1 MD12G1140800.v1.1 MD14G1056700.v1.1
prunus_persica Prupe.6G078800_v2.0.a1 Prupe.6G254100_v2.0.a1 Prupe.6G254100_v2.0.a1 Prupe.6G254100_v2.0.a1 Prupe.7G077300_v2.0.a1 Prupe.7G077300_v2.0.a1
pyrus_communis pycom01g02640 pycom03g07780 pycom11g09110 pycom126g00040 pycom14g04650 pycom15g30330
rosa_chinensis RchiOBHm_Chr1g0367041 RchiOBHm_Chr3g0466761 RchiOBHm_Chr3g0479651 RchiOBHm_Chr5g0064311
rosa_laevigata RLG00000023550 RLG00000024555 RLG00000027304 RLG00000035715
rosa_multiflora Rmu_co8518979.1_g000001 Rmu_sc0002269.1_g000004 Rmu_sc0003467.1_g000022 Rmu_sc0003755.1_g000002 Rmu_sc0013440.1_g000001 Rmu_sc0013700.1_g000002 Rmu_sc0026659.1_g000001 Rmu_sc0037142.1_g000001
rosa_roxburghii Rroxscaffold_1G00016700 Rroxscaffold_4G00289680 Rroxscaffold_6G00402090
rosa_rugosa Rorug01G0334100 Rorug03G0083700 Rorug03G0083800 Rorug03G0177100 Rorug03G0177200 Rorug05G0364000 Rorug05G0364100
rosa_samantha Rh1AG340900 Rh1BG301400 Rh1CG317600 Rh1DG333800 Rh2AG276500 Rh3AG130800 Rh3AG227900 Rh3BG151800 Rh3BG261100 Rh3CG151700 Rh3DG152500 Rh3DG254400 Rh5AG421900 Rh5BG437600 Rh5CG460300 Rh5DG450700
rosa_wichuraiana Rw0G023870 Rw1G030280 Rw3G012360 Rw3G020390 Rw5G039710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 896
AccB1I GGYRCC 1 cut(s) 1324
AccBSI CCGCTC 1 cut(s) 59
AccI GTMKAC 1 cut(s) 1271
AccII CGCG 3 cut(s) 162, 164, 275
AciI CCGC 4 cut(s) 36, 57, 164, 472
AclWI GGATC 3 cut(s) 1386, 1399, 1439
AcoI YGGCCR 2 cut(s) 360, 469
AcsI RAATTY 2 cut(s) 320, 615
AcuI CTGAAG 1 cut(s) 1050
AfaI GTAC 4 cut(s) 805, 1143, 1373, 1473
AfiI CCNNNNNNNGG 1 cut(s) 119
AgsI TTSAA 6 cut(s) 65, 326, 380, 578, 745, 1046
AhlI ACTAGT 1 cut(s) 346
AjiI CACGTC 1 cut(s) 479
AjnI CCWGG 3 cut(s) 771, 819, 1282
AjuI GAANNNNNNNTTGG 2 cut(s) 45, 77
AleI CACNNNNGTG 2 cut(s) 486, 488
AloI GAACNNNNNNTCC 2 cut(s) 1239, 1271
AluBI AGCT 7 cut(s) 77, 140, 974, 1009, 1042, 1080, 1175
AluI AGCT 7 cut(s) 77, 140, 974, 1009, 1042, 1080, 1175
Alw21I GWGCWC 1 cut(s) 23
Alw26I GTCTC 3 cut(s) 522, 731, 1184
AlwI GGATC 3 cut(s) 1386, 1399, 1439
AlwNI CAGNNNCTG 1 cut(s) 1380
AoxI GGCC 3 cut(s) 360, 469, 702
ApeKI GCWGC 4 cut(s) 77, 137, 1175, 1332
ApoI RAATTY 2 cut(s) 320, 615
Asp700I GAANNNNTTC 1 cut(s) 1484
AspLEI GCGC 2 cut(s) 164, 275
AspS9I GGNCC 2 cut(s) 913, 1460
AsuHPI GGTGA 4 cut(s) 304, 955, 1099, 1114
AvaII GGWCC 2 cut(s) 913, 1460
BamHI GGATCC 1 cut(s) 1391
BanI GGYRCC 1 cut(s) 1324
BbsI GAAGAC 1 cut(s) 101
Bbv12I GWGCWC 1 cut(s) 23
BbvCI CCTCAGC 1 cut(s) 369
BbvI GCAGC 4 cut(s) 64, 149, 1162, 1344
BceAI ACGGC 3 cut(s) 179, 185, 1332
BcgI CGANNNNNNTGC 2 cut(s) 1113, 1147
BciT130I CCWGG 3 cut(s) 773, 821, 1284
BclI TGATCA 1 cut(s) 1104
BcoDI GTCTC 3 cut(s) 522, 731, 1184
BcuI ACTAGT 1 cut(s) 346
BfaI CTAG 2 cut(s) 347, 1489
BfmI CTRYAG 1 cut(s) 1176
BfuAI ACCTGC 1 cut(s) 896
BglI GCCNNNNNGGC 1 cut(s) 773
BisI GCNGC 5 cut(s) 78, 138, 472, 1176, 1333
BlpI GCTNAGC 2 cut(s) 975, 1119
BlsI GCNGC 5 cut(s) 79, 139, 473, 1177, 1334
BmcAI AGTACT 1 cut(s) 1143
Bme1390I CCNGG 3 cut(s) 773, 821, 1284
Bme18I GGWCC 2 cut(s) 913, 1460
BmgBI CACGTC 1 cut(s) 479
BmgT120I GGNCC 2 cut(s) 913, 1460
BmiI GGNNCC 4 cut(s) 102, 914, 1326, 1393
BmrFI CCNGG 3 cut(s) 773, 821, 1284
BmrI ACTGGG 2 cut(s) 414, 607
BmsI GCATC 5 cut(s) 427, 505, 631, 913, 1412
BmuI ACTGGG 2 cut(s) 414, 607
BpiI GAAGAC 1 cut(s) 101
BplI GAGNNNNNCTC 2 cut(s) 10, 42
BpmI CTGGAG 2 cut(s) 450, 849
Bpu10I CCTNAGC 1 cut(s) 369
Bpu1102I GCTNAGC 2 cut(s) 975, 1119
BpuEI CTTGAG 1 cut(s) 219
BsaBI GATNNNNATC 2 cut(s) 1109, 1430
BsaJI CCNNGG 3 cut(s) 363, 443, 1282
BsaXI ACNNNNNCTCC 2 cut(s) 822, 852
Bsc4I CCNNNNNNNGG 1 cut(s) 119
Bse118I RCCGGY 1 cut(s) 97
Bse1I ACTGG 8 cut(s) 136, 217, 409, 490, 602, 668, 795, 814
Bse3DI GCAATG 1 cut(s) 1287
Bse8I GATNNNNATC 2 cut(s) 1109, 1430
BseBI CCWGG 3 cut(s) 773, 821, 1284
BseDI CCNNGG 3 cut(s) 363, 443, 1282
BseGI GGATG 6 cut(s) 414, 520, 607, 664, 768, 1395
BseJI GATNNNNATC 2 cut(s) 1109, 1430
BseLI CCNNNNNNNGG 1 cut(s) 119
BseMI GCAATG 1 cut(s) 1287
BseMII CTCAG 7 cut(s) 360, 551, 936, 966, 1110, 1273, 1353
BseNI ACTGG 8 cut(s) 136, 217, 409, 490, 602, 668, 795, 814
BseRI GAGGAG 3 cut(s) 15, 294, 297
BseXI GCAGC 4 cut(s) 64, 149, 1162, 1344
BsgI GTGCAG 1 cut(s) 156
Bsh1236I CGCG 3 cut(s) 162, 164, 275
BshFI GGCC 3 cut(s) 362, 471, 704
BshNI GGYRCC 1 cut(s) 1324
BsiHKAI GWGCWC 1 cut(s) 23
BsiSI CCGG 1 cut(s) 98
BslFI GGGAC 3 cut(s) 415, 926, 1007
BslI CCNNNNNNNGG 1 cut(s) 119
BsmAI GTCTC 3 cut(s) 522, 731, 1184
BsmBI CGTCTC 1 cut(s) 522
BsmFI GGGAC 3 cut(s) 415, 926, 1007
BsmI GAATGC 1 cut(s) 1182
BsnI GGCC 3 cut(s) 362, 471, 704
Bsp1286I GDGCHC 1 cut(s) 23
Bsp1407I TGTACA 1 cut(s) 1471
Bsp143I GATC 5 cut(s) 146, 278, 1104, 1391, 1431
Bsp1720I GCTNAGC 2 cut(s) 975, 1119
BspACI CCGC 4 cut(s) 36, 57, 164, 472
BspANI GGCC 3 cut(s) 362, 471, 704
BspCNI CTCAG 7 cut(s) 361, 550, 937, 967, 1111, 1272, 1354
BspFNI CGCG 3 cut(s) 162, 164, 275
BspHI TCATGA 2 cut(s) 1186, 1209
BspLI GGNNCC 4 cut(s) 102, 914, 1326, 1393
BspMAI CTGCAG 1 cut(s) 1180
BspMI ACCTGC 1 cut(s) 896
BspPI GGATC 3 cut(s) 1386, 1399, 1439
BspQI GCTCTTC 1 cut(s) 66
BspT107I GGYRCC 1 cut(s) 1324
BsrBI CCGCTC 1 cut(s) 59
BsrDI GCAATG 1 cut(s) 1287
BsrFI RCCGGY 1 cut(s) 97
BsrGI TGTACA 1 cut(s) 1471
BsrI ACTGG 8 cut(s) 136, 217, 409, 490, 602, 668, 795, 814
BssAI RCCGGY 1 cut(s) 97
BssECI CCNNGG 3 cut(s) 363, 443, 1282
BssMI GATC 5 cut(s) 146, 278, 1104, 1391, 1431
BssT1I CCWWGG 1 cut(s) 443
Bst2UI CCWGG 3 cut(s) 773, 821, 1284
Bst4CI ACNGT 4 cut(s) 8, 258, 850, 1376
Bst6I CTCTTC 2 cut(s) 66, 194
BstAPI GCANNNNNTGC 1 cut(s) 1019
BstAUI TGTACA 1 cut(s) 1471
BstC8I GCNNGC 3 cut(s) 99, 1011, 1180
BstENI CCTNNNNNAGG 1 cut(s) 117
BstF5I GGATG 6 cut(s) 414, 520, 607, 664, 768, 1395
BstFNI CGCG 3 cut(s) 162, 164, 275
BstHHI GCGC 2 cut(s) 164, 275
BstKTI GATC 5 cut(s) 149, 281, 1107, 1394, 1434
BstMAI GTCTC 3 cut(s) 522, 731, 1184
BstMBI GATC 5 cut(s) 146, 278, 1104, 1391, 1431
BstMWI GCNNNNNNNGC 6 cut(s) 191, 425, 446, 468, 773, 1019
BstNI CCWGG 3 cut(s) 773, 821, 1284
BstNSI RCATGY 1 cut(s) 884
BstSCI CCNGG 3 cut(s) 771, 819, 1282
BstSFI CTRYAG 1 cut(s) 1176
BstUI CGCG 3 cut(s) 162, 164, 275
BstV1I GCAGC 4 cut(s) 64, 149, 1162, 1344
BstV2I GAAGAC 1 cut(s) 101
BstX2I RGATCY 1 cut(s) 1391
BstYI RGATCY 1 cut(s) 1391
BsuRI GGCC 3 cut(s) 362, 471, 704
BtrI CACGTC 1 cut(s) 479
BtsCI GGATG 6 cut(s) 414, 520, 607, 664, 768, 1395
BtsIMutI CAGTG 8 cut(s) 129, 210, 483, 802, 846, 918, 1267, 1381
BveI ACCTGC 1 cut(s) 896
Cac8I GCNNGC 3 cut(s) 99, 1011, 1180
CaiI CAGNNNCTG 1 cut(s) 1380
CciI TCATGA 2 cut(s) 1186, 1209
CfoI GCGC 2 cut(s) 164, 275
Cfr10I RCCGGY 1 cut(s) 97
Cfr13I GGNCC 2 cut(s) 913, 1460
Csp6I GTAC 4 cut(s) 804, 1142, 1372, 1472
CviQI GTAC 4 cut(s) 804, 1142, 1372, 1472
DpnI GATC 5 cut(s) 148, 280, 1106, 1393, 1433
DpnII GATC 5 cut(s) 146, 278, 1104, 1391, 1431
EaeI YGGCCR 2 cut(s) 360, 469
Eam1104I CTCTTC 2 cut(s) 66, 194
EarI CTCTTC 2 cut(s) 66, 194
Eco130I CCWWGG 1 cut(s) 443
Eco32I GATATC 1 cut(s) 1228
Eco47I GGWCC 2 cut(s) 913, 1460
Eco57I CTGAAG 1 cut(s) 1050
EcoNI CCTNNNNNAGG 1 cut(s) 117
EcoO109I RGGNCCY 1 cut(s) 913
EcoRII CCWGG 3 cut(s) 771, 819, 1282
EcoRV GATATC 1 cut(s) 1228
EcoT14I CCWWGG 1 cut(s) 443
EcoT22I ATGCAT 1 cut(s) 520
ErhI CCWWGG 1 cut(s) 443
Esp3I CGTCTC 1 cut(s) 522
FaqI GGGAC 3 cut(s) 415, 926, 1007
FauNDI CATATG 1 cut(s) 520
FbaI TGATCA 1 cut(s) 1104
FblI GTMKAC 1 cut(s) 1271
Fnu4HI GCNGC 5 cut(s) 78, 138, 472, 1176, 1333
FokI GGATG 6 cut(s) 421, 527, 614, 651, 755, 1382
Fsp4HI GCNGC 5 cut(s) 78, 138, 472, 1176, 1333
FspBI CTAG 2 cut(s) 347, 1489
GlaI GCGC 2 cut(s) 163, 274
GluI GCNGC 5 cut(s) 78, 138, 472, 1176, 1333
GsuI CTGGAG 2 cut(s) 450, 849
HaeIII GGCC 3 cut(s) 362, 471, 704
HapII CCGG 1 cut(s) 98
HhaI GCGC 2 cut(s) 164, 275
Hin6I GCGC 2 cut(s) 162, 273
HinP1I GCGC 2 cut(s) 162, 273
HindIII AAGCTT 1 cut(s) 1007
HinfI GANTC 4 cut(s) 11, 824, 1125, 1454
HpaII CCGG 1 cut(s) 98
HphI GGTGA 4 cut(s) 304, 955, 1099, 1114
Hpy166II GTNNAC 2 cut(s) 1272, 1474
Hpy188I TCNGA 3 cut(s) 263, 283, 693
Hpy8I GTNNAC 2 cut(s) 1272, 1474
Hpy99I CGWCG 2 cut(s) 200, 206
HpyAV CCTTC 5 cut(s) 119, 299, 970, 994, 1228
HpyCH4III ACNGT 4 cut(s) 8, 258, 850, 1376
HpyCH4IV ACGT 1 cut(s) 478
HpyCH4V TGCA 7 cut(s) 33, 80, 119, 137, 518, 1013, 1178
HpyF10VI GCNNNNNNNGC 6 cut(s) 191, 425, 446, 468, 773, 1019
HpySE526I ACGT 1 cut(s) 478
HspAI GCGC 2 cut(s) 162, 273
KroI GCCGGC 1 cut(s) 97
KroNI GCCGGC 1 cut(s) 99
Ksp22I TGATCA 1 cut(s) 1104
Kzo9I GATC 5 cut(s) 146, 278, 1104, 1391, 1431
LguI GCTCTTC 1 cut(s) 66
LmnI GCTCC 6 cut(s) 18, 106, 166, 445, 1039, 1360
Lsp1109I GCAGC 4 cut(s) 64, 149, 1162, 1344
LweI GCATC 5 cut(s) 427, 505, 631, 913, 1412
MaeI CTAG 2 cut(s) 347, 1489
MaeII ACGT 1 cut(s) 478
MaeIII GTNAC 2 cut(s) 392, 479
MalI GATC 5 cut(s) 148, 280, 1106, 1393, 1433
MbiI CCGCTC 1 cut(s) 59
MboI GATC 5 cut(s) 146, 278, 1104, 1391, 1431
MboII GAAGA 8 cut(s) 53, 101, 181, 284, 287, 290, 671, 1056
MfeI CAATTG 1 cut(s) 1467
MflI RGATCY 1 cut(s) 1391
MhlI GDGCHC 1 cut(s) 23
MluCI AATT 4 cut(s) 320, 615, 1085, 1467
MlyI GAGTC 1 cut(s) 818
MmeI TCCRAC 2 cut(s) 505, 1174
Mph1103I ATGCAT 1 cut(s) 520
MroNI GCCGGC 1 cut(s) 97
MroXI GAANNNNTTC 1 cut(s) 1484
MseI TTAA 2 cut(s) 222, 414
MslI CAYNNNNRTG 2 cut(s) 486, 488
MspA1I CMGCKG 1 cut(s) 974
MspI CCGG 1 cut(s) 98
MspR9I CCNGG 3 cut(s) 773, 821, 1284
MunI CAATTG 1 cut(s) 1467
Mva1269I GAATGC 1 cut(s) 1182
MvaI CCWGG 3 cut(s) 773, 821, 1284
MvnI CGCG 3 cut(s) 162, 164, 275
MwoI GCNNNNNNNGC 6 cut(s) 191, 425, 446, 468, 773, 1019
NaeI GCCGGC 1 cut(s) 99
NdeI CATATG 1 cut(s) 520
NdeII GATC 5 cut(s) 146, 278, 1104, 1391, 1431
NgoMIV GCCGGC 1 cut(s) 97
NlaIV GGNNCC 4 cut(s) 102, 914, 1326, 1393
NmeAIII GCCGAG 1 cut(s) 388
NmuCI GTSAC 2 cut(s) 392, 479
NsiI ATGCAT 1 cut(s) 520
NspI RCATGY 1 cut(s) 884
OliI CACNNNNGTG 2 cut(s) 486, 488
PagI TCATGA 2 cut(s) 1186, 1209
PciSI GCTCTTC 1 cut(s) 66
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PctI GAATGC 1 cut(s) 1182
PdiI GCCGGC 1 cut(s) 99
PdmI GAANNNNTTC 1 cut(s) 1484
PfeI GAWTC 3 cut(s) 11, 1125, 1454
PfoI TCCNGGA 1 cut(s) 819
PkrI GCNGC 5 cut(s) 79, 139, 473, 1177, 1334
PleI GAGTC 1 cut(s) 818
PpsI GAGTC 1 cut(s) 818
PpuMI RGGWCCY 1 cut(s) 913
Psp5II RGGWCCY 1 cut(s) 913
Psp6I CCWGG 3 cut(s) 771, 819, 1282
PspGI CCWGG 3 cut(s) 771, 819, 1282
PspN4I GGNNCC 4 cut(s) 102, 914, 1326, 1393
PspPI GGNCC 2 cut(s) 913, 1460
PspPPI RGGWCCY 1 cut(s) 913
PstI CTGCAG 1 cut(s) 1180
PstNI CAGNNNCTG 1 cut(s) 1380
PsuI RGATCY 1 cut(s) 1391
PvuII CAGCTG 1 cut(s) 974
RsaI GTAC 4 cut(s) 805, 1143, 1373, 1473
RsaNI GTAC 4 cut(s) 804, 1142, 1372, 1472
RseI CAYNNNNRTG 2 cut(s) 486, 488
SapI GCTCTTC 1 cut(s) 66
SaqAI TTAA 2 cut(s) 222, 414
SatI GCNGC 5 cut(s) 78, 138, 472, 1176, 1333
Sau3AI GATC 5 cut(s) 146, 278, 1104, 1391, 1431
Sau96I GGNCC 2 cut(s) 913, 1460
ScaI AGTACT 1 cut(s) 1143
SchI GAGTC 1 cut(s) 818
ScrFI CCNGG 3 cut(s) 773, 821, 1284
SduI GDGCHC 1 cut(s) 23
SfaNI GCATC 5 cut(s) 427, 505, 631, 913, 1412
SfcI CTRYAG 1 cut(s) 1176
SinI GGWCC 2 cut(s) 913, 1460
SmiMI CAYNNNNRTG 2 cut(s) 486, 488
SmlI CTYRAG 1 cut(s) 234
SmoI CTYRAG 1 cut(s) 234
SpeI ACTAGT 1 cut(s) 346
Sse9I AATT 4 cut(s) 320, 615, 1085, 1467
SsiI CCGC 4 cut(s) 36, 57, 164, 472
SspMI CTAG 2 cut(s) 347, 1489
StyD4I CCNGG 3 cut(s) 771, 819, 1282
StyI CCWWGG 1 cut(s) 443
TaaI ACNGT 4 cut(s) 8, 258, 850, 1376
TaiI ACGT 1 cut(s) 481
TaqI TCGA 2 cut(s) 145, 1224
TasI AATT 4 cut(s) 320, 615, 1085, 1467
TatI WGTACW 3 cut(s) 1141, 1371, 1471
TauI GCSGC 1 cut(s) 474
TfiI GAWTC 3 cut(s) 11, 1125, 1454
Tru1I TTAA 2 cut(s) 222, 414
Tru9I TTAA 2 cut(s) 222, 414
TscAI CASTG 8 cut(s) 136, 217, 490, 802, 853, 925, 1267, 1381
TseFI GTSAC 2 cut(s) 392, 479
TseI GCWGC 4 cut(s) 77, 137, 1175, 1332
Tsp45I GTSAC 2 cut(s) 392, 479
TspDTI ATGAA 8 cut(s) 654, 947, 1013, 1098, 1175, 1226, 1352, 1467
TspGWI ACGGA 2 cut(s) 881, 1118
TspRI CASTG 8 cut(s) 136, 217, 490, 802, 853, 925, 1267, 1381
VpaK11BI GGWCC 2 cut(s) 913, 1460
XagI CCTNNNNNAGG 1 cut(s) 117
XapI RAATTY 2 cut(s) 320, 615
XceI RCATGY 1 cut(s) 884
XmiI GTMKAC 1 cut(s) 1271
XmnI GAANNNNTTC 1 cut(s) 1484
XspI CTAG 2 cut(s) 347, 1489
ZrmI AGTACT 1 cut(s) 1143
Zsp2I ATGCAT 1 cut(s) 520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.