Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001266.1

Orthogroup ID

OG0005168

Physical Location & Seq

Genomic Coordinates Reverse (-)

24532 .. 29751

Gene Structure 5220 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001266.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

atggggccggggagcgctgggaatccaccaccatactcatcaacacctccgcgtccacctgacctagatgaagtcaggaggaagaggatccaaatcgctagagaacaggcagctgcgtggcgccgtgaactcgagaaaactatggcatcgttccagtctgagttactaaacaagttgaggcattttcgcttggagctcatagctcaggtgatggagtcgtcagtgccgactttgtccgttccaatcatatctcagccagtgactcagtctgtctcttcagggctgcaacttgggatcatcgattgttacaaaccgctgccaccaccatcggccacggcgaatccctacccgtacggctacgagcttcaacaacttccacctccgccgcctagaccatcagtcaccgtccacacgttgggtgagccaccatcccaagcccacatgaggtacacctaccactcagtctcaattggtgatttcaatcaaaatatgaggtacacttaccactcgataaaaattggtgatttcaatcaaaatattaaccaggaacaacaatatttctctttgaatgatgattgtggtgctttaagtcctgtgtctgttgctaaattgactggtattgatgagaaattagatatgggagagggagataatgctgataagatggttaaggtgaatagtagggttggtagagacttcaatgagcttaagaatggcagttctgagcaggacgagggtggttctattgaagataaggagcagctgagcaatggaatgttagaatatcatgccctccaattgttcgataaaatgccaaagtcagaagggcggtgtaatgcaggaaggaccataattgcttctatgggcattcgaaacaaaggtggaggactcgctactcattgtgaaattgttgacgcttctgactatttaggccttcctaaagcacgttcccaggtccattataatgtccgccttgctgctgtagaggtgttagctgctgctttaaaaaaatctgtagttcaaggctatgcagctgtacaacaaccaatacctgctgcaagcccaattggaatgctaaacgtgatgcctccgatgtcaattgatcgtgtggaaactacaccatcaatccaatatggattttcaagcatgcctatcataactgctattgggttaaatagttgtaaatctcaattaactactatggaggtgactgcttgtacagtgaagaagaatgaaagtttcggaagtaaaattggtagaaagggtgcattgtgtataaggcttaagcattacattgaaggttttaacaagatttgtcataatgtactgcaactctgccttcctgggtttgataagaagttgatggtttggtccattaggcctttggatgaactgaagggtagtgtgtgcactctgcatagatctcttgcagacgttgttgactcccattctatgtggatctttgtttttcaaacaattgctagacccttgttgttatttcttgctgctggaatatcagaaaccttatcctcgagttcttgttcatctgcatggtgtaaattttttgaagatgcctctgcagtgatgtatgatccttcaaatttggagatattgatggggataggagagggtctcgagaacattcatttacctttcgaagatgaggaagaagttgttagtgcagtccttgatttctctacttatttagatgataatcttgacaccttagcccatgatcttggtgacaatagccatgctgctcttcattgcattgacaccactgttgttgagatgttgaacacaagtgttgttgagcaactaaattactatcatcagactcttggagaattggcaggattgaatgattggaaaaggagtcaaggatatcatgtggttctcagaattgtagcgttgaagatttatctttttgtggtgcttactgtttgctatgagaccaacccagatcgcttcatctcctccattcagtcctccctacgatggtctctaaatgcaattctcacccacagcggcgcaacaagaccgcaaaggcgagagcagtcggacccgatcggttctcctatgtctggtgacgtttgggcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0007154 GO:0007165 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0023052 GO:0031090 GO:0031965 GO:0031967 GO:0031975 GO:0033036 GO:0033218 GO:0033365 GO:0034504 GO:0034613 GO:0038023 GO:0042277 GO:0042802 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060089 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Xpo1

Protein Analysis

700

Amino Acids

77.23

Weight (kDa)

5.78

Isoelectric Point (pI)

50.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005168)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g22470
rosa_chinensis	RchiOBHm_Chr4g0385821 RchiOBHm_Chr4g0393181 RchiOBHm_Chr4g0393191 RchiOBHm_Chr6g0274801 RchiOBHm_Chr7g0189981 RchiOBHm_Chr7g0189991
rosa_laevigata	RLG00000004572
rosa_multiflora	Rmu_sc0000365.1_g000052 Rmu_sc0000365.1_g000053 Rmu_sc0000827.1_g000018 Rmu_sc0001251.1_g000022 Rmu_sc0001266.1_g000003 Rmu_sc0001879.1_g000042 Rmu_sc0003069.1_g000022 Rmu_sc0004886.1_g000002 Rmu_sc0005120.1_g000011 Rmu_sc0005120.1_g000012 Rmu_sc0006153.1_g000015 Rmu_sc0014668.1_g000003
rosa_roxburghii	Rroxscaffold_1G00049180 Rroxscaffold_3G00241490 Rroxscaffold_3G00262780 Rroxscaffold_4G00276460 Rroxscaffold_4G00302780 Rroxscaffold_5G00359090 Rroxscaffold_5G00369400 Rroxscaffold_7G00165260
rosa_samantha	Rh6AG039900 Rh7CG111700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	963
Acc36I	ACCTGC	1 cut(s)	1060
AccB1I	GGYRCC	1 cut(s)	120
AccB7I	CCANNNNNTGG	1 cut(s)	415
AccII	CGCG	1 cut(s)	52
AciI	CCGC	8 cut(s)	50, 314, 383, 386, 829, 970, 2028, 2042
AclWI	GGATC	5 cut(s)	82, 95, 302, 1466, 1586
AcoI	YGGCCR	1 cut(s)	330
AcsI	RAATTY	2 cut(s)	1559, 1600
AcuI	CTGAAG	2 cut(s)	261, 1415
AcyI	GRCGYC	1 cut(s)	121
AfaI	GTAC	6 cut(s)	353, 449, 497, 1038, 1219, 1326
AfeI	AGCGCT	1 cut(s)	16
AfiI	CCNNNNNNNGG	4 cut(s)	415, 444, 1998, 2084
AflII	CTTAAG	2 cut(s)	707, 1283
AflIII	ACRYGT	1 cut(s)	411
AhdI	GACNNNNNGTC	1 cut(s)	398
AjnI	CCWGG	3 cut(s)	543, 951, 1342
AluBI	AGCT	8 cut(s)	113, 196, 203, 364, 706, 763, 995, 1034
AluI	AGCT	8 cut(s)	113, 196, 203, 364, 706, 763, 995, 1034
Alw21I	GWGCWC	2 cut(s)	198, 1412
Alw26I	GTCTC	6 cut(s)	277, 469, 687, 1637, 1946, 2007
Alw44I	GTGCAC	1 cut(s)	1408
AlwI	GGATC	5 cut(s)	82, 95, 302, 1466, 1586
Ama87I	CYCGRG	3 cut(s)	131, 1531, 1634
Aor51HI	AGCGCT	1 cut(s)	16
AoxI	GGCC	4 cut(s)	5, 330, 931, 1379
ApaLI	GTGCAC	1 cut(s)	1408
ApoI	RAATTY	2 cut(s)	1559, 1600
AspLEI	GCGC	3 cut(s)	17, 123, 2033
AspS9I	GGNCC	5 cut(s)	5, 846, 955, 1371, 2062
AsuC2I	CCSGG	1 cut(s)	9
AsuII	TTCGAA	2 cut(s)	871, 1656
AvaI	CYCGRG	3 cut(s)	131, 1531, 1634
AvaII	GGWCC	4 cut(s)	846, 955, 1371, 2062
BaeGI	GKGCMC	1 cut(s)	1412
BamHI	GGATCC	1 cut(s)	87
BanI	GGYRCC	1 cut(s)	120
BanII	GRGCYC	1 cut(s)	198
Bbv12I	GWGCWC	2 cut(s)	198, 1412
BccI	CCATC	9 cut(s)	205, 334, 403, 436, 658, 1129, 1357, 1609, 1992
BceAI	ACGGC	3 cut(s)	108, 351, 370
BciT130I	CCWGG	3 cut(s)	545, 953, 1344
BcnI	CCSGG	1 cut(s)	9
BcoDI	GTCTC	6 cut(s)	277, 469, 687, 1637, 1946, 2007
BfaI	CTAG	4 cut(s)	65, 99, 390, 1482
BfmI	CTRYAG	3 cut(s)	981, 1014, 1578
BfoI	RGCGCY	2 cut(s)	18, 124
BfrI	CTTAAG	2 cut(s)	707, 1283
BfuAI	ACCTGC	1 cut(s)	1060
BglII	AGATCT	1 cut(s)	1421
BlpI	GCTNAGC	1 cut(s)	764
Bme1390I	CCNGG	4 cut(s)	9, 545, 953, 1344
Bme18I	GGWCC	4 cut(s)	846, 955, 1371, 2062
BmeRI	GACNNNNNGTC	1 cut(s)	398
BmeT110I	CYCGRG	3 cut(s)	131, 1531, 1634
BmgT120I	GGNCC	5 cut(s)	5, 846, 955, 1371, 2062
BmiI	GGNNCC	4 cut(s)	6, 89, 122, 2064
BmrFI	CCNGG	4 cut(s)	9, 545, 953, 1344
BmsI	GCATC	3 cut(s)	155, 1074, 1561
BplI	GAGNNNNNCTC	2 cut(s)	1617, 1649
Bpu10I	CCTNAGC	2 cut(s)	204, 1726
Bpu1102I	GCTNAGC	1 cut(s)	764
Bpu14I	TTCGAA	2 cut(s)	871, 1656
BpuMI	CCSGG	1 cut(s)	9
Bsa29I	ATCGAT	1 cut(s)	300
BsaBI	GATNNNNATC	4 cut(s)	92, 480, 528, 1713
BsaHI	GRCGYC	1 cut(s)	121
BsaI	GGTCTC	3 cut(s)	1637, 1946, 2007
BsaJI	CCNNGG	4 cut(s)	8, 333, 951, 1343
Bsc4I	CCNNNNNNNGG	4 cut(s)	415, 444, 1998, 2084
Bse1I	ACTGG	3 cut(s)	154, 257, 619
Bse3DI	GCAATG	2 cut(s)	775, 1765
Bse8I	GATNNNNATC	4 cut(s)	92, 480, 528, 1713
BseBI	CCWGG	3 cut(s)	545, 953, 1344
BseCI	ATCGAT	1 cut(s)	300
BseDI	CCNNGG	4 cut(s)	8, 333, 951, 1343
BseGI	GGATG	2 cut(s)	428, 1393
BseJI	GATNNNNATC	4 cut(s)	92, 480, 528, 1713
BseLI	CCNNNNNNNGG	4 cut(s)	415, 444, 1998, 2084
BseMI	GCAATG	2 cut(s)	775, 1765
BseMII	CTCAG	8 cut(s)	150, 218, 266, 278, 474, 714, 755, 1912
BseNI	ACTGG	3 cut(s)	154, 257, 619
BseRI	GAGGAG	1 cut(s)	1966
BseSI	GKGCMC	1 cut(s)	1412
BseYI	CCCAGC	1 cut(s)	17
BsgI	GTGCAG	1 cut(s)	1701
Bsh1236I	CGCG	1 cut(s)	52
Bsh1285I	CGRYCG	1 cut(s)	2070
BshFI	GGCC	4 cut(s)	7, 332, 933, 1381
BshNI	GGYRCC	1 cut(s)	120
BshVI	ATCGAT	1 cut(s)	300
BsiEI	CGRYCG	1 cut(s)	2070
BsiHKAI	GWGCWC	2 cut(s)	198, 1412
BsiHKCI	CYCGRG	3 cut(s)	131, 1531, 1634
BsiSI	CCGG	1 cut(s)	8
BsiWI	CGTACG	1 cut(s)	351
BslI	CCNNNNNNNGG	4 cut(s)	415, 444, 1998, 2084
BsmAI	GTCTC	6 cut(s)	277, 469, 687, 1637, 1946, 2007
BsmI	GAATGC	2 cut(s)	867, 1077
BsnI	GGCC	4 cut(s)	7, 332, 933, 1381
Bso31I	GGTCTC	3 cut(s)	1637, 1946, 2007
BsoBI	CYCGRG	3 cut(s)	131, 1531, 1634
Bsp119I	TTCGAA	2 cut(s)	871, 1656
Bsp1286I	GDGCHC	2 cut(s)	198, 1412
Bsp1407I	TGTACA	2 cut(s)	1036, 1217
Bsp143I	GATC	9 cut(s)	87, 294, 1102, 1421, 1458, 1591, 1735, 1963, 2067
Bsp1720I	GCTNAGC	1 cut(s)	764
BspACI	CCGC	8 cut(s)	50, 314, 383, 386, 829, 970, 2028, 2042
BspANI	GGCC	4 cut(s)	7, 332, 933, 1381
BspCNI	CTCAG	8 cut(s)	151, 217, 265, 277, 473, 715, 756, 1911
BspDI	ATCGAT	1 cut(s)	300
BspFNI	CGCG	1 cut(s)	52
BspLI	GGNNCC	4 cut(s)	6, 89, 122, 2064
BspMAI	CTGCAG	1 cut(s)	1582
BspMI	ACCTGC	1 cut(s)	1060
BspPI	GGATC	5 cut(s)	82, 95, 302, 1466, 1586
BspQI	GCTCTTC	1 cut(s)	1767
BspT104I	TTCGAA	2 cut(s)	871, 1656
BspT107I	GGYRCC	1 cut(s)	120
BspTI	CTTAAG	2 cut(s)	707, 1283
BspTNI	GGTCTC	3 cut(s)	1637, 1946, 2007
BsrDI	GCAATG	2 cut(s)	775, 1765
BsrGI	TGTACA	2 cut(s)	1036, 1217
BsrI	ACTGG	3 cut(s)	154, 257, 619
BssECI	CCNNGG	4 cut(s)	8, 333, 951, 1343
BssMI	GATC	9 cut(s)	87, 294, 1102, 1421, 1458, 1591, 1735, 1963, 2067
BssNI	GRCGYC	1 cut(s)	121
Bst2UI	CCWGG	3 cut(s)	545, 953, 1344
Bst4CI	ACNGT	4 cut(s)	406, 1222, 1783, 1942
Bst6I	CTCTTC	3 cut(s)	77, 280, 1767
BstACI	GRCGYC	1 cut(s)	121
BstAFI	CTTAAG	2 cut(s)	707, 1283
BstAUI	TGTACA	2 cut(s)	1036, 1217
BstBI	TTCGAA	2 cut(s)	871, 1656
BstC8I	GCNNGC	2 cut(s)	1060, 1148
BstDEI	CTNAG	9 cut(s)	159, 204, 252, 264, 460, 723, 764, 1726, 1898
BstDSI	CCRYGG	1 cut(s)	333
BstF5I	GGATG	2 cut(s)	428, 1393
BstFNI	CGCG	1 cut(s)	52
BstH2I	RGCGCY	2 cut(s)	18, 124
BstHHI	GCGC	3 cut(s)	17, 123, 2033
BstKTI	GATC	9 cut(s)	90, 297, 1105, 1424, 1461, 1594, 1738, 1966, 2070
BstMAI	GTCTC	6 cut(s)	277, 469, 687, 1637, 1946, 2007
BstMBI	GATC	9 cut(s)	87, 294, 1102, 1421, 1458, 1591, 1735, 1963, 2067
BstMCI	CGRYCG	1 cut(s)	2070
BstNI	CCWGG	3 cut(s)	545, 953, 1344
BstNSI	RCATGY	1 cut(s)	1150
BstSCI	CCNGG	4 cut(s)	7, 543, 951, 1342
BstSFI	CTRYAG	3 cut(s)	981, 1014, 1578
BstSLI	GKGCMC	1 cut(s)	1412
BstUI	CGCG	1 cut(s)	52
BstX2I	RGATCY	3 cut(s)	87, 1421, 1458
BstXI	CCANNNNNNTGG	1 cut(s)	1739
BstYI	RGATCY	3 cut(s)	87, 1421, 1458
Bsu15I	ATCGAT	1 cut(s)	300
BsuRI	GGCC	4 cut(s)	7, 332, 933, 1381
BsuTUI	ATCGAT	1 cut(s)	300
BtgI	CCRYGG	1 cut(s)	333
BtsCI	GGATG	2 cut(s)	428, 1393
BtsI	GCAGTG	1 cut(s)	1587
BtsIMutI	CAGTG	5 cut(s)	228, 264, 1227, 1587, 1779
BveI	ACCTGC	1 cut(s)	1060
Cac8I	GCNNGC	2 cut(s)	1060, 1148
CfoI	GCGC	3 cut(s)	17, 123, 2033
Cfr13I	GGNCC	5 cut(s)	5, 846, 955, 1371, 2062
ClaI	ATCGAT	1 cut(s)	300
CseI	GACGC	2 cut(s)	41, 923
Csp6I	GTAC	6 cut(s)	352, 448, 496, 1037, 1218, 1325
CspCI	CAANNNNNGTGG	2 cut(s)	1768, 1803
CviAII	CATG	7 cut(s)	442, 788, 1147, 1551, 1733, 1754, 1889
CviQI	GTAC	6 cut(s)	352, 448, 496, 1037, 1218, 1325
DdeI	CTNAG	9 cut(s)	159, 204, 252, 264, 460, 723, 764, 1726, 1898
DinI	GGCGCC	1 cut(s)	122
DpnI	GATC	9 cut(s)	89, 296, 1104, 1423, 1460, 1593, 1737, 1965, 2069
DpnII	GATC	9 cut(s)	87, 294, 1102, 1421, 1458, 1591, 1735, 1963, 2067
DraI	TTTAAA	1 cut(s)	1005
DriI	GACNNNNNGTC	1 cut(s)	398
EaeI	YGGCCR	1 cut(s)	330
Eam1104I	CTCTTC	3 cut(s)	77, 280, 1767
Eam1105I	GACNNNNNGTC	1 cut(s)	398
EarI	CTCTTC	3 cut(s)	77, 280, 1767
EciI	GGCGGA	2 cut(s)	372, 959
Ecl136II	GAGCTC	1 cut(s)	196
Eco147I	AGGCCT	2 cut(s)	933, 1381
Eco24I	GRGCYC	1 cut(s)	198
Eco31I	GGTCTC	3 cut(s)	1637, 1946, 2007
Eco32I	GATATC	1 cut(s)	1886
Eco47I	GGWCC	4 cut(s)	846, 955, 1371, 2062
Eco47III	AGCGCT	1 cut(s)	16
Eco53kI	GAGCTC	1 cut(s)	196
Eco57I	CTGAAG	2 cut(s)	261, 1415
Eco88I	CYCGRG	3 cut(s)	131, 1531, 1634
EcoICRI	GAGCTC	1 cut(s)	196
EcoRII	CCWGG	3 cut(s)	543, 951, 1342
EcoRV	GATATC	1 cut(s)	1886
EcoT38I	GRGCYC	1 cut(s)	198
EgeI	GGCGCC	1 cut(s)	122
EheI	GGCGCC	1 cut(s)	122
FaeI	CATG	7 cut(s)	445, 791, 1150, 1554, 1736, 1757, 1892
FatI	CATG	7 cut(s)	441, 787, 1146, 1550, 1732, 1753, 1888
FokI	GGATG	2 cut(s)	415, 1400
FriOI	GRGCYC	1 cut(s)	198
FspBI	CTAG	4 cut(s)	65, 99, 390, 1482
GlaI	GCGC	3 cut(s)	16, 122, 2032
GsaI	CCCAGC	1 cut(s)	21
HaeII	RGCGCY	2 cut(s)	18, 124
HaeIII	GGCC	4 cut(s)	7, 332, 933, 1381
HapII	CCGG	1 cut(s)	8
HgaI	GACGC	2 cut(s)	41, 923
HhaI	GCGC	3 cut(s)	17, 123, 2033
Hin1I	GRCGYC	1 cut(s)	121
Hin1II	CATG	7 cut(s)	445, 791, 1150, 1554, 1736, 1757, 1892
Hin6I	GCGC	3 cut(s)	15, 121, 2031
HinP1I	GCGC	3 cut(s)	15, 121, 2031
HincII	GTYRAC	2 cut(s)	913, 1441
HindII	GTYRAC	2 cut(s)	913, 1441
HinfI	GANTC	8 cut(s)	22, 215, 262, 340, 888, 1442, 1837, 1876
HpaII	CCGG	1 cut(s)	8
Hpy166II	GTNNAC	8 cut(s)	56, 128, 409, 450, 498, 913, 1410, 1441
Hpy188III	TCNNGA	5 cut(s)	76, 133, 1634, 1636, 1718
Hpy8I	GTNNAC	8 cut(s)	56, 128, 409, 450, 498, 913, 1410, 1441
HpyAV	CCTTC	7 cut(s)	818, 837, 944, 1292, 1349, 1390, 1605
HpyCH4III	ACNGT	4 cut(s)	406, 1222, 1783, 1942
HpyCH4IV	ACGT	5 cut(s)	413, 946, 1080, 1434, 2091
HpyF3I	CTNAG	9 cut(s)	159, 204, 252, 264, 460, 723, 764, 1726, 1898
HpySE526I	ACGT	5 cut(s)	413, 946, 1080, 1434, 2091
Hsp92I	GRCGYC	1 cut(s)	121
Hsp92II	CATG	7 cut(s)	445, 791, 1150, 1554, 1736, 1757, 1892
HspAI	GCGC	3 cut(s)	15, 121, 2031
KasI	GGCGCC	1 cut(s)	120
Kzo9I	GATC	9 cut(s)	87, 294, 1102, 1421, 1458, 1591, 1735, 1963, 2067
LguI	GCTCTTC	1 cut(s)	1767
LmnI	GCTCC	3 cut(s)	12, 193, 757
LweI	GCATC	3 cut(s)	155, 1074, 1561
MaeI	CTAG	4 cut(s)	65, 99, 390, 1482
MaeII	ACGT	5 cut(s)	413, 946, 1080, 1434, 2091
MaeIII	GTNAC	7 cut(s)	162, 259, 305, 400, 1207, 1742, 2087
MalI	GATC	9 cut(s)	89, 296, 1104, 1423, 1460, 1593, 1737, 1965, 2069
MboI	GATC	9 cut(s)	87, 294, 1102, 1421, 1458, 1591, 1735, 1963, 2067
MfeI	CAATTG	5 cut(s)	468, 797, 1065, 1098, 1476
MflI	RGATCY	3 cut(s)	87, 1421, 1458
MhlI	GDGCHC	2 cut(s)	198, 1412
Mly113I	GGCGCC	1 cut(s)	121
MlyI	GAGTC	6 cut(s)	224, 256, 882, 1436, 1831, 1885
MmeI	TCCRAC	1 cut(s)	2040
MseI	TTAA	9 cut(s)	540, 587, 669, 708, 1004, 1172, 1193, 1284, 1305
MslI	CAYNNNNRTG	2 cut(s)	963, 1549
MspA1I	CMGCKG	5 cut(s)	113, 316, 763, 1034, 2028
MspCI	CTTAAG	2 cut(s)	707, 1283
MspI	CCGG	1 cut(s)	8
MspR9I	CCNGG	4 cut(s)	9, 545, 953, 1344
MunI	CAATTG	5 cut(s)	468, 797, 1065, 1098, 1476
Mva1269I	GAATGC	2 cut(s)	867, 1077
MvaI	CCWGG	3 cut(s)	545, 953, 1344
MvnI	CGCG	1 cut(s)	52
NarI	GGCGCC	1 cut(s)	121
NciI	CCSGG	1 cut(s)	9
NdeII	GATC	9 cut(s)	87, 294, 1102, 1421, 1458, 1591, 1735, 1963, 2067
NlaIII	CATG	7 cut(s)	445, 791, 1150, 1554, 1736, 1757, 1892
NlaIV	GGNNCC	4 cut(s)	6, 89, 122, 2064
NmuCI	GTSAC	5 cut(s)	259, 400, 1207, 1742, 2087
NspI	RCATGY	1 cut(s)	1150
NspV	TTCGAA	2 cut(s)	871, 1656
PaeI	GCATGC	1 cut(s)	1150
PaeR7I	CTCGAG	3 cut(s)	131, 1531, 1634
PceI	AGGCCT	2 cut(s)	933, 1381
PciSI	GCTCTTC	1 cut(s)	1767
PcsI	WCGNNNNNNNCGW	2 cut(s)	224, 335
PctI	GAATGC	2 cut(s)	867, 1077
PfeI	GAWTC	2 cut(s)	22, 340
Pfl23II	CGTACG	1 cut(s)	351
PflFI	GACNNNGTC	2 cut(s)	232, 265
PflMI	CCANNNNNTGG	1 cut(s)	415
Ple19I	CGATCG	1 cut(s)	2070
PleI	GAGTC	6 cut(s)	223, 256, 882, 1436, 1831, 1884
PluTI	GGCGCC	1 cut(s)	124
PpsI	GAGTC	6 cut(s)	223, 256, 882, 1436, 1831, 1884
PsiI	TTATAA	1 cut(s)	963
Psp124BI	GAGCTC	1 cut(s)	198
Psp6I	CCWGG	3 cut(s)	543, 951, 1342
PspFI	CCCAGC	1 cut(s)	17
PspGI	CCWGG	3 cut(s)	543, 951, 1342
PspLI	CGTACG	1 cut(s)	351
PspN4I	GGNNCC	4 cut(s)	6, 89, 122, 2064
PspPI	GGNCC	5 cut(s)	5, 846, 955, 1371, 2062
PspXI	VCTCGAGB	1 cut(s)	1531
PstI	CTGCAG	1 cut(s)	1582
PsuI	RGATCY	3 cut(s)	87, 1421, 1458
PsyI	GACNNNGTC	2 cut(s)	232, 265
PvuI	CGATCG	1 cut(s)	2070
PvuII	CAGCTG	3 cut(s)	113, 763, 1034
RsaI	GTAC	6 cut(s)	353, 449, 497, 1038, 1219, 1326
RsaNI	GTAC	6 cut(s)	352, 448, 496, 1037, 1218, 1325
RseI	CAYNNNNRTG	2 cut(s)	963, 1549
SacI	GAGCTC	1 cut(s)	198
SapI	GCTCTTC	1 cut(s)	1767
SaqAI	TTAA	9 cut(s)	540, 587, 669, 708, 1004, 1172, 1193, 1284, 1305
Sau3AI	GATC	9 cut(s)	87, 294, 1102, 1421, 1458, 1591, 1735, 1963, 2067
Sau96I	GGNCC	5 cut(s)	5, 846, 955, 1371, 2062
SchI	GAGTC	6 cut(s)	224, 256, 882, 1436, 1831, 1885
ScrFI	CCNGG	4 cut(s)	9, 545, 953, 1344
SduI	GDGCHC	2 cut(s)	198, 1412
SfaNI	GCATC	3 cut(s)	155, 1074, 1561
SfcI	CTRYAG	3 cut(s)	981, 1014, 1578
SfoI	GGCGCC	1 cut(s)	122
Sfr274I	CTCGAG	3 cut(s)	131, 1531, 1634
SfuI	TTCGAA	2 cut(s)	871, 1656
SinI	GGWCC	4 cut(s)	846, 955, 1371, 2062
SlaI	CTCGAG	3 cut(s)	131, 1531, 1634
SmiMI	CAYNNNNRTG	2 cut(s)	963, 1549
SmlI	CTYRAG	5 cut(s)	131, 707, 1283, 1531, 1634
SmoI	CTYRAG	5 cut(s)	131, 707, 1283, 1531, 1634
SphI	GCATGC	1 cut(s)	1150
SseBI	AGGCCT	2 cut(s)	933, 1381
SsiI	CCGC	8 cut(s)	50, 314, 383, 386, 829, 970, 2028, 2042
SspDI	GGCGCC	1 cut(s)	120
SspI	AATATT	2 cut(s)	538, 557
SspMI	CTAG	4 cut(s)	65, 99, 390, 1482
SstI	GAGCTC	1 cut(s)	198
StuI	AGGCCT	2 cut(s)	933, 1381
StyD4I	CCNGG	4 cut(s)	7, 543, 951, 1342
TaaI	ACNGT	4 cut(s)	406, 1222, 1783, 1942
TaiI	ACGT	5 cut(s)	416, 949, 1083, 1437, 2094
TaqI	TCGA	8 cut(s)	132, 300, 509, 804, 871, 1532, 1635, 1656
TatI	WGTACW	3 cut(s)	1036, 1217, 1324
TauI	GCSGC	2 cut(s)	388, 2031
TfiI	GAWTC	2 cut(s)	22, 340
Tru1I	TTAA	9 cut(s)	540, 587, 669, 708, 1004, 1172, 1193, 1284, 1305
Tru9I	TTAA	9 cut(s)	540, 587, 669, 708, 1004, 1172, 1193, 1284, 1305
TscAI	CASTG	5 cut(s)	228, 264, 1227, 1587, 1786
TseFI	GTSAC	5 cut(s)	259, 400, 1207, 1742, 2087
Tsp45I	GTSAC	5 cut(s)	259, 400, 1207, 1742, 2087
TspDTI	ATGAA	7 cut(s)	84, 1248, 1404, 1533, 1634, 1754, 1960
TspGWI	ACGGA	1 cut(s)	226
TspRI	CASTG	5 cut(s)	228, 264, 1227, 1587, 1786
Tth111I	GACNNNGTC	2 cut(s)	232, 265
Van91I	CCANNNNNTGG	1 cut(s)	415
Vha464I	CTTAAG	2 cut(s)	707, 1283
VneI	GTGCAC	1 cut(s)	1408
VpaK11BI	GGWCC	4 cut(s)	846, 955, 1371, 2062
XapI	RAATTY	2 cut(s)	1559, 1600
XceI	RCATGY	1 cut(s)	1150
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1381
XhoI	CTCGAG	3 cut(s)	131, 1531, 1634
XspI	CTAG	4 cut(s)	65, 99, 390, 1482

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.