Rroxscaffold_3G00262780

DNA polymerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0005168
Physical Location & Seq
Forward (+)
56747623 .. 56754154
6532 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00262780.1

Sequence Viewer

Length: 2283 bp
ATGACTGGCTTTCCCCAATTATTGTGGGATGAGGAAAACTCTTCTCAGGTAACCATTTTCAATCCTAGGTTGGAAGCTACTTTCTTGAATCGAAACTTGGTTGAATCATTTGCGACAATAGCGGTGTCAATGTTTGATTTCTCTAAGCATGCAAGGAAACACAAGGCCATTGATTTTGAGCAGTTCATATTGTGTCATTTTGGCATTAGTGAATTAATGACAACTCTTGAAGGAGCAAACTTACAATCTAGTCTACCTAACTGGAAATTTAGATTAAAATTTTCAACTTCACGTCACAAAGGATATTTTGAATATGATCTGCATATTACAAACTTGACTGGGAGCATGAGAATAAATGCCCAGAATCTATTTGTTCACGTGCATGAGAGGCAAATTGAAGCCAAATCTTTAGCCCTACATTTTTCTAGTTTCATTAATTCAATTATCAATGCTGGTATTGAGACCATTGTGCCATCATTTAGTCATGCCTGGGATTTTCAAATTCACCAACTTGGACCACCCTTGCCTACTTCTGGTCATTTTGAGGTGATAAATTTTGCAAACAGGTTTCTTGCTTTCCAGATCTATTTTTCAATTGGTACCATTGGTTTCAAGATGACAGTCATTGCTTCCTTAGGTGAGATCTGCAGTCAAATACTACAACCTCAAATGTGCAATTCCATATTTGCAGCAATTTCTACCAAACTGAGCCCATTTGTGCTTGTTACTCTGGACATTGAGCTGCACAATCAAGTGAGTTGGTCTAAGCCATTATTGGGTGCTAATTGGCTTCTACGTTCTTTGGATAGTGATGATTTCTGGTCTGCAATGTTCAATTTTTTTCATCACTGTCTTTGCATAATTCTTGTCCAAGTATTTACAAGATCAGAAGTCTTGTTGAATCATGTTCTAGAGGCTCCAGGACTTCATGAATGGTTGGCAGGAGCTATTGAAATTGGAAATCCTTATGCTTTGCTTTTGGCTCTGAAAATGGGAGAAAAAGTTTATGTGGCCAGTGCAAGATTTGGGAGCCAGTGGAAGATTTGTGGGAAAATTAAATGTGGTGGGGAAAAGGAGTTGCATGTGATTCTCTTTAAAATTCATAGGGAGCCACTTGAGAAATGTTTGGCGTATGCTCTACCTACTTTGGATGCGATTTGTTTATGTGTCCAGAAGCTTTTCTTGGTTGATTGGGCTTTTGCAGATGTACCAATATCTTGGAAGGATGTGGAAACCAAGTTGTTTGCTCTTTACTTCCCTAACTTCATGATTGCATTCATCGAATTTGGCTTCGTGGCAATTGATGATGGAGTTCTTGCATTGGTTCCTCAAATACACTTTTCAGTACACATGTGGACAAAGGAAGCTCTTCTACTCGTCCTGTTGTCTGCAACTATGCACTCCCAAACAATGAAATTTGTAATTTCAAGCATTCTATTGCAGAGTCCCAATAGAGAAGCCTTGAGGGTTTTTTCTAATATGCAACATTTATATCATCGGCAATCAAATTTTAATTCTCAGGTGTGCGTTCATCTATGTGCACTACTCCATGCTTGGCAAGTTACTACAGATGATGGATACTTGCAATTGGATGATAAATTGGGTTGTGATCTTATGACTATGGATAATGAGACCGAGTTGGTTCTGTATACTGGATGTCAAACTCCACAGAACTGTTGGTCAATAACATATGAGAGCAGGAAAAGCAATAACAATATCAGTGGCAAGACTTGCTCTGTCTCTCTAGTGTCCAATTCATTGAATTTGTACTTAACAATATTGCTGCCATATGGAATTTTTGAGGTAGGAGAAGATTCTGTAAGTGGTATATTTTGCTCGCAATTGTTGCTGGACTTGGTAAGAAAAATGTTGCAGATTTGGACATGGGAAAATGGCGGATTTTTGCAGACTCAGATGATTGTTGAGGCAAGGGATTTTCAAAAAAGAACAATGTGTTGTCATCAACTGGTCTATAGCTCTTCAAGTTTCAAAGGATATGTGGCACTGACATCAGCCATCTTGCATAGAAGATTTGCAATGAATGGAGCAGCAGCAACAACAATTTTACATTTGTACTGGAACTGGTTTCACTTCTTTGCTGGAGTGCCTGCTGATATACATTTAAACTATGACTGGAAAGAGAGCTTCCCTGATGTTCCAACTGGGGGATTTGATCAGTTCAAAGCATTGGTGAGAGGTATCCAGATTTTGACTCAGAATGTGAAACTTGAGGACAAGTTTCTGTTAAGGGGGCTGCATTGTTATGAAATTAGGCCTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000182 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003712 GO:0003714 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006091 GO:0006139 GO:0006351 GO:0006355 GO:0006360 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0007154 GO:0007165 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0008219 GO:0008270 GO:0009058 GO:0009059 GO:0009267 GO:0009303 GO:0009605 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010629 GO:0010941 GO:0010942 GO:0012501 GO:0015980 GO:0016070 GO:0016072 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022900 GO:0022904 GO:0023052 GO:0031074 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032501 GO:0032774 GO:0032922 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0035556 GO:0042149 GO:0042564 GO:0042594 GO:0042790 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045333 GO:0045787 GO:0045892 GO:0045934 GO:0046483 GO:0046872 GO:0046914 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0051726 GO:0055114 GO:0060255 GO:0065007 GO:0070013 GO:0070888 GO:0071156 GO:0071158 GO:0071496 GO:0071704 GO:0072331 GO:0072332 GO:0080090 GO:0090068 GO:0090304 GO:0097159 GO:0097190 GO:0097193 GO:0097659 GO:0098781 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000112 GO:2000113 GO:2000209 GO:2000210 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_pol_phi

Protein Analysis

760

Amino Acids

86.6

Weight (kDa)

6.45

Isoelectric Point (pI)

35.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 599
AccB1I GGYRCC 1 cut(s) 599
AccI GTMKAC 2 cut(s) 253, 1649
AciI CCGC 2 cut(s) 122, 1896
AcoI YGGCCR 1 cut(s) 1011
AcvI CACGTG 1 cut(s) 379
AfaI GTAC 5 cut(s) 601, 1209, 1347, 1769, 2075
AfiI CCNNNNNNNGG 3 cut(s) 533, 776, 2165
AflIII ACRYGT 1 cut(s) 1350
AjiI CACGTC 1 cut(s) 293
AjnI CCWGG 2 cut(s) 488, 919
AjuI GAANNNNNNNTTGG 4 cut(s) 80, 112, 1166, 1198
AluBI AGCT 7 cut(s) 77, 742, 947, 1177, 1367, 1977, 2145
AluI AGCT 7 cut(s) 77, 742, 947, 1177, 1367, 1977, 2145
Alw21I GWGCWC 1 cut(s) 1543
Alw26I GTCTC 3 cut(s) 455, 1625, 1744
Alw44I GTGCAC 1 cut(s) 1539
AoxI GGCC 3 cut(s) 165, 1011, 2273
ApaLI GTGCAC 1 cut(s) 1539
ApeKI GCWGC 6 cut(s) 689, 742, 1783, 2048, 2051, 2254
AseI ATTAAT 2 cut(s) 215, 435
Asp700I GAANNNNTTC 2 cut(s) 1178, 1368
Asp718I GGTACC 1 cut(s) 599
AspA2I CCTAGG 1 cut(s) 65
AspS9I GGNCC 1 cut(s) 515
AsuHPI GGTGA 4 cut(s) 497, 559, 650, 2203
AvaII GGWCC 1 cut(s) 515
AvrII CCTAGG 1 cut(s) 65
AxyI CCTNAGG 1 cut(s) 634
BaeGI GKGCMC 1 cut(s) 1543
BalI TGGCCA 1 cut(s) 1013
BanI GGYRCC 1 cut(s) 599
BanII GRGCYC 1 cut(s) 713
BarI GAAGNNNNNNTAC 2 cut(s) 1356, 1388
BbrPI CACGTG 1 cut(s) 379
Bbv12I GWGCWC 1 cut(s) 1543
BbvI GCAGC 6 cut(s) 701, 729, 1770, 2060, 2063, 2241
BccI CCATC 4 cut(s) 481, 1301, 1568, 2024
BciT130I CCWGG 2 cut(s) 490, 921
BciVI GTATCC 2 cut(s) 1571, 2210
BclI TGATCA 1 cut(s) 2173
BcoDI GTCTC 3 cut(s) 455, 1625, 1744
BfaI CTAG 5 cut(s) 66, 249, 426, 911, 1745
BfmI CTRYAG 3 cut(s) 646, 1566, 1972
BfuI GTATCC 2 cut(s) 1571, 2210
BglII AGATCT 2 cut(s) 582, 642
BisI GCNGC 6 cut(s) 690, 743, 1784, 2049, 2052, 2255
BlnI CCTAGG 1 cut(s) 65
BlsI GCNGC 6 cut(s) 691, 744, 1785, 2050, 2053, 2256
Bme1390I CCNGG 2 cut(s) 490, 921
Bme18I GGWCC 1 cut(s) 515
BmgBI CACGTC 1 cut(s) 293
BmgT120I GGNCC 1 cut(s) 515
BmiI GGNNCC 5 cut(s) 601, 918, 1031, 1110, 1326
BmrFI CCNGG 2 cut(s) 490, 921
BmrI ACTGGG 2 cut(s) 348, 2172
BmsI GCATC 1 cut(s) 1141
BmuI ACTGGG 2 cut(s) 348, 2172
BplI GAGNNNNNCTC 2 cut(s) 23, 55
BpmI CTGGAG 2 cut(s) 903, 2121
BpuEI CTTGAG 3 cut(s) 1136, 1483, 2249
BsaAI YACGTR 1 cut(s) 379
BsaI GGTCTC 2 cut(s) 455, 1625
BsaJI CCNNGG 2 cut(s) 65, 489
BsaXI ACNNNNNCTCC 2 cut(s) 987, 1017
Bsc4I CCNNNNNNNGG 3 cut(s) 533, 776, 2165
Bse21I CCTNAGG 1 cut(s) 634
Bse3DI GCAATG 3 cut(s) 624, 834, 2043
BseBI CCWGG 2 cut(s) 490, 921
BseDI CCNNGG 2 cut(s) 65, 489
BseGI GGATG 5 cut(s) 34, 1156, 1231, 1597, 1661
BseLI CCNNNNNNNGG 3 cut(s) 533, 776, 2165
BseMI GCAATG 3 cut(s) 624, 834, 2043
BseMII CTCAG 5 cut(s) 59, 698, 1532, 1925, 2228
BseSI GKGCMC 1 cut(s) 1543
BseXI GCAGC 6 cut(s) 701, 729, 1770, 2060, 2063, 2241
BsgI GTGCAG 1 cut(s) 728
BshFI GGCC 3 cut(s) 167, 1013, 2275
BshNI GGYRCC 1 cut(s) 599
BsiHKAI GWGCWC 1 cut(s) 1543
BslFI GGGAC 1 cut(s) 1431
BslI CCNNNNNNNGG 3 cut(s) 533, 776, 2165
BsmAI GTCTC 3 cut(s) 455, 1625, 1744
BsmFI GGGAC 1 cut(s) 1431
BsmI GAATGC 2 cut(s) 1274, 1431
BsnI GGCC 3 cut(s) 167, 1013, 2275
Bso31I GGTCTC 2 cut(s) 455, 1625
Bsp1286I GDGCHC 2 cut(s) 713, 1543
Bsp143I GATC 6 cut(s) 316, 582, 642, 884, 1609, 2173
BspACI CCGC 2 cut(s) 122, 1896
BspANI GGCC 3 cut(s) 167, 1013, 2275
BspCNI CTCAG 5 cut(s) 58, 699, 1531, 1924, 2227
BspHI TCATGA 2 cut(s) 928, 1266
BspLI GGNNCC 5 cut(s) 601, 918, 1031, 1110, 1326
BspMAI CTGCAG 1 cut(s) 650
BspQI GCTCTTC 2 cut(s) 1374, 1984
BspT107I GGYRCC 1 cut(s) 599
BspTNI GGTCTC 2 cut(s) 455, 1625
BsrDI GCAATG 3 cut(s) 624, 834, 2043
BssECI CCNNGG 2 cut(s) 65, 489
BssMI GATC 6 cut(s) 316, 582, 642, 884, 1609, 2173
BssNAI GTATAC 1 cut(s) 1650
BssT1I CCWWGG 1 cut(s) 65
Bst1107I GTATAC 1 cut(s) 1650
Bst2UI CCWGG 2 cut(s) 490, 921
Bst4CI ACNGT 3 cut(s) 622, 851, 1676
Bst6I CTCTTC 3 cut(s) 46, 1374, 1984
BstAPI GCANNNNNTGC 2 cut(s) 1731, 1846
BstBAI YACGTR 1 cut(s) 379
BstC8I GCNNGC 3 cut(s) 150, 1838, 2109
BstDEI CTNAG 8 cut(s) 45, 144, 634, 707, 765, 1518, 1911, 2214
BstEII GGTNACC 1 cut(s) 49
BstF5I GGATG 5 cut(s) 34, 1156, 1231, 1597, 1661
BstKTI GATC 6 cut(s) 319, 585, 645, 887, 1612, 2176
BstMAI GTCTC 3 cut(s) 455, 1625, 1744
BstMBI GATC 6 cut(s) 316, 582, 642, 884, 1609, 2173
BstMWI GCNNNNNNNGC 5 cut(s) 119, 388, 1704, 1731, 1846
BstNI CCWGG 2 cut(s) 490, 921
BstNSI RCATGY 3 cut(s) 152, 1085, 1354
BstPI GGTNACC 1 cut(s) 49
BstSCI CCNGG 2 cut(s) 488, 919
BstSFI CTRYAG 3 cut(s) 646, 1566, 1972
BstSLI GKGCMC 1 cut(s) 1543
BstV1I GCAGC 6 cut(s) 701, 729, 1770, 2060, 2063, 2241
BstX2I RGATCY 2 cut(s) 582, 642
BstXI CCANNNNNNTGG 1 cut(s) 1218
BstYI RGATCY 2 cut(s) 582, 642
BstZ17I GTATAC 1 cut(s) 1650
Bsu36I CCTNAGG 1 cut(s) 634
BsuI GTATCC 2 cut(s) 1571, 2210
BsuRI GGCC 3 cut(s) 167, 1013, 2275
BtrI CACGTC 1 cut(s) 293
BtsCI GGATG 5 cut(s) 34, 1156, 1231, 1597, 1661
BtsIMutI CAGTG 5 cut(s) 847, 1021, 1040, 1726, 2003
Cac8I GCNNGC 3 cut(s) 150, 1838, 2109
CciI TCATGA 2 cut(s) 928, 1266
Cfr13I GGNCC 1 cut(s) 515
Csp6I GTAC 5 cut(s) 600, 1208, 1346, 1768, 2074
CspCI CAANNNNNGTGG 4 cut(s) 5, 40, 1702, 1737
CviQI GTAC 5 cut(s) 600, 1208, 1346, 1768, 2074
DdeI CTNAG 8 cut(s) 45, 144, 634, 707, 765, 1518, 1911, 2214
DpnI GATC 6 cut(s) 318, 584, 644, 886, 1611, 2175
DpnII GATC 6 cut(s) 316, 582, 642, 884, 1609, 2173
DraI TTTAAA 2 cut(s) 1096, 2124
EaeI YGGCCR 1 cut(s) 1011
Eam1104I CTCTTC 3 cut(s) 46, 1374, 1984
EarI CTCTTC 3 cut(s) 46, 1374, 1984
EciI GGCGGA 1 cut(s) 1911
Eco130I CCWWGG 1 cut(s) 65
Eco147I AGGCCT 1 cut(s) 2275
Eco24I GRGCYC 1 cut(s) 713
Eco31I GGTCTC 2 cut(s) 455, 1625
Eco47I GGWCC 1 cut(s) 515
Eco72I CACGTG 1 cut(s) 379
Eco81I CCTNAGG 1 cut(s) 634
Eco91I GGTNACC 1 cut(s) 49
EcoO65I GGTNACC 1 cut(s) 49
EcoRII CCWGG 2 cut(s) 488, 919
EcoT14I CCWWGG 1 cut(s) 65
EcoT38I GRGCYC 1 cut(s) 713
ErhI CCWWGG 1 cut(s) 65
FalI AAGNNNNNCTT 2 cut(s) 1166, 1198
FaqI GGGAC 1 cut(s) 1431
FauNDI CATATG 2 cut(s) 1690, 1789
FbaI TGATCA 1 cut(s) 2173
FblI GTMKAC 2 cut(s) 253, 1649
Fnu4HI GCNGC 6 cut(s) 690, 743, 1784, 2049, 2052, 2255
FokI GGATG 5 cut(s) 41, 1163, 1238, 1604, 1668
FriOI GRGCYC 1 cut(s) 713
Fsp4HI GCNGC 6 cut(s) 690, 743, 1784, 2049, 2052, 2255
FspBI CTAG 5 cut(s) 66, 249, 426, 911, 1745
GluI GCNGC 6 cut(s) 690, 743, 1784, 2049, 2052, 2255
GsuI CTGGAG 2 cut(s) 903, 2121
HaeIII GGCC 3 cut(s) 167, 1013, 2275
HindIII AAGCTT 1 cut(s) 1175
HinfI GANTC 9 cut(s) 88, 104, 364, 901, 1087, 1444, 1814, 1909, 2212
HphI GGTGA 4 cut(s) 497, 559, 650, 2203
Hpy166II GTNNAC 6 cut(s) 254, 376, 1348, 1356, 1541, 1650
Hpy188I TCNGA 4 cut(s) 889, 987, 1914, 2217
Hpy8I GTNNAC 6 cut(s) 254, 376, 1348, 1356, 1541, 1650
HpyAV CCTTC 2 cut(s) 224, 1216
HpyCH4III ACNGT 3 cut(s) 622, 851, 1676
HpyCH4IV ACGT 3 cut(s) 292, 378, 796
HpyF10VI GCNNNNNNNGC 5 cut(s) 119, 388, 1704, 1731, 1846
HpyF3I CTNAG 8 cut(s) 45, 144, 634, 707, 765, 1518, 1911, 2214
HpySE526I ACGT 3 cut(s) 292, 378, 796
KpnI GGTACC 1 cut(s) 603
Ksp22I TGATCA 1 cut(s) 2173
Kzo9I GATC 6 cut(s) 316, 582, 642, 884, 1609, 2173
LguI GCTCTTC 2 cut(s) 1374, 1984
LmnI GCTCC 7 cut(s) 233, 342, 922, 944, 1029, 1108, 2045
Lsp1109I GCAGC 6 cut(s) 701, 729, 1770, 2060, 2063, 2241
LweI GCATC 1 cut(s) 1141
MaeI CTAG 5 cut(s) 66, 249, 426, 911, 1745
MaeII ACGT 3 cut(s) 292, 378, 796
MaeIII GTNAC 4 cut(s) 49, 293, 724, 1561
MalI GATC 6 cut(s) 318, 584, 644, 886, 1611, 2175
MboI GATC 6 cut(s) 316, 582, 642, 884, 1609, 2173
MboII GAAGA 6 cut(s) 33, 1051, 1361, 1823, 1971, 2040
MfeI CAATTG 4 cut(s) 594, 1299, 1586, 1841
MflI RGATCY 2 cut(s) 582, 642
MhlI GDGCHC 2 cut(s) 713, 1543
MlsI TGGCCA 1 cut(s) 1013
MluNI TGGCCA 1 cut(s) 1013
MlyI GAGTC 3 cut(s) 1453, 1903, 2206
MmeI TCCRAC 2 cut(s) 51, 2183
Mox20I TGGCCA 1 cut(s) 1013
MroXI GAANNNNTTC 2 cut(s) 1178, 1368
MscI TGGCCA 1 cut(s) 1013
MseI TTAA 9 cut(s) 215, 275, 435, 1056, 1095, 1512, 1772, 2123, 2246
MslI CAYNNNNRTG 3 cut(s) 381, 1536, 2262
Msp20I TGGCCA 1 cut(s) 1013
MspR9I CCNGG 2 cut(s) 490, 921
MunI CAATTG 4 cut(s) 594, 1299, 1586, 1841
Mva1269I GAATGC 2 cut(s) 1274, 1431
MvaI CCWGG 2 cut(s) 490, 921
MwoI GCNNNNNNNGC 5 cut(s) 119, 388, 1704, 1731, 1846
NdeI CATATG 2 cut(s) 1690, 1789
NdeII GATC 6 cut(s) 316, 582, 642, 884, 1609, 2173
NlaIV GGNNCC 5 cut(s) 601, 918, 1031, 1110, 1326
NmuCI GTSAC 1 cut(s) 293
NspI RCATGY 3 cut(s) 152, 1085, 1354
PaeI GCATGC 1 cut(s) 152
PagI TCATGA 2 cut(s) 928, 1266
PceI AGGCCT 1 cut(s) 2275
PciI ACATGT 1 cut(s) 1350
PciSI GCTCTTC 2 cut(s) 1374, 1984
PctI GAATGC 2 cut(s) 1274, 1431
PdmI GAANNNNTTC 2 cut(s) 1178, 1368
PfeI GAWTC 6 cut(s) 88, 104, 364, 901, 1087, 1814
PfoI TCCNGGA 1 cut(s) 919
PkrI GCNGC 6 cut(s) 691, 744, 1785, 2050, 2053, 2256
PleI GAGTC 3 cut(s) 1452, 1903, 2206
PmaCI CACGTG 1 cut(s) 379
PmlI CACGTG 1 cut(s) 379
PpsI GAGTC 3 cut(s) 1452, 1903, 2206
Ppu21I YACGTR 1 cut(s) 379
PscI ACATGT 1 cut(s) 1350
PshBI ATTAAT 2 cut(s) 215, 435
Psp6I CCWGG 2 cut(s) 488, 919
PspCI CACGTG 1 cut(s) 379
PspEI GGTNACC 1 cut(s) 49
PspGI CCWGG 2 cut(s) 488, 919
PspN4I GGNNCC 5 cut(s) 601, 918, 1031, 1110, 1326
PspPI GGNCC 1 cut(s) 515
PstI CTGCAG 1 cut(s) 650
PsuI RGATCY 2 cut(s) 582, 642
RsaI GTAC 5 cut(s) 601, 1209, 1347, 1769, 2075
RsaNI GTAC 5 cut(s) 600, 1208, 1346, 1768, 2074
RseI CAYNNNNRTG 3 cut(s) 381, 1536, 2262
SapI GCTCTTC 2 cut(s) 1374, 1984
SaqAI TTAA 9 cut(s) 215, 275, 435, 1056, 1095, 1512, 1772, 2123, 2246
SatI GCNGC 6 cut(s) 690, 743, 1784, 2049, 2052, 2255
Sau3AI GATC 6 cut(s) 316, 582, 642, 884, 1609, 2173
Sau96I GGNCC 1 cut(s) 515
SchI GAGTC 3 cut(s) 1453, 1903, 2206
ScrFI CCNGG 2 cut(s) 490, 921
SduI GDGCHC 2 cut(s) 713, 1543
SfaNI GCATC 1 cut(s) 1141
SfcI CTRYAG 3 cut(s) 646, 1566, 1972
SinI GGWCC 1 cut(s) 515
SmiMI CAYNNNNRTG 3 cut(s) 381, 1536, 2262
SmlI CTYRAG 3 cut(s) 1115, 1462, 2228
SmoI CTYRAG 3 cut(s) 1115, 1462, 2228
SphI GCATGC 1 cut(s) 152
SseBI AGGCCT 1 cut(s) 2275
SsiI CCGC 2 cut(s) 122, 1896
SspI AATATT 1 cut(s) 1779
SspMI CTAG 5 cut(s) 66, 249, 426, 911, 1745
StuI AGGCCT 1 cut(s) 2275
StyD4I CCNGG 2 cut(s) 488, 919
StyI CCWWGG 1 cut(s) 65
TaaI ACNGT 3 cut(s) 622, 851, 1676
TaiI ACGT 3 cut(s) 295, 381, 799
TaqI TCGA 2 cut(s) 91, 1281
TaqII GACCGA 1 cut(s) 1649
TatI WGTACW 3 cut(s) 1345, 1767, 2073
TfiI GAWTC 6 cut(s) 88, 104, 364, 901, 1087, 1814
Tru1I TTAA 9 cut(s) 215, 275, 435, 1056, 1095, 1512, 1772, 2123, 2246
Tru9I TTAA 9 cut(s) 215, 275, 435, 1056, 1095, 1512, 1772, 2123, 2246
TscAI CASTG 5 cut(s) 854, 1021, 1040, 1726, 2010
TseFI GTSAC 1 cut(s) 293
TseI GCWGC 6 cut(s) 689, 742, 1783, 2048, 2051, 2254
Tsp45I GTSAC 1 cut(s) 293
TspRI CASTG 5 cut(s) 854, 1021, 1040, 1726, 2010
VneI GTGCAC 1 cut(s) 1539
VpaK11BI GGWCC 1 cut(s) 515
VspI ATTAAT 2 cut(s) 215, 435
XbaI TCTAGA 1 cut(s) 910
XceI RCATGY 3 cut(s) 152, 1085, 1354
XcmI CCANNNNNNNNNTGG 1 cut(s) 1674
XmaJI CCTAGG 1 cut(s) 65
XmiI GTMKAC 2 cut(s) 253, 1649
XmnI GAANNNNTTC 2 cut(s) 1178, 1368
XspI CTAG 5 cut(s) 66, 249, 426, 911, 1745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.