Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003069.1

Orthogroup ID

OG0005168

Physical Location & Seq

Genomic Coordinates Forward (+)

109266 .. 112586

Gene Structure 3321 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003069.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3093 bp

atgcccatcatcccaaacaatcatcaatgggtatgttttccctcaccagtttccacatctttctgctcagttgagcgccaatgcacgtcgtcccccgcctccttcttccgcccaccattatcattttcagtcgtatcattttcagcagcctacaccaccacctctgcctcttgctccgaacccctaaaacacaagaggctcaaaccgattcgggtgaaccaaaaccttcggataaggtcccaaatactgatgaagcgaaaacccttgtctaggcttgctcgccgcagtcaaacccaaattcatggcgattcaaagacggaccgatgtggcgctcttttgattacctccgcagaacccgatgctttcgatgtgccagttgagaaatctcctgcttccgttcctgtgctgatagctgcagctgtgactggatgccgaaaccttctggtttcagaatcaacaccaacgcaccttgagcagaaaacccatctgggtaatcatgtagacatgctcgaactcaactctcaactgaagcagctagtcaaaatttgtaatgttaaagaagccaggaagatgttcgataaaaggcctaagcgagatgcggtttcatggaccagtatgatttcaggctatgctacagtttctgattcctctaaagcattagctctgttctctaacatgtgggtacagccacaagtgtttactcgtgtatcaagtgtttgtggaaccatgcactctacatattactcgccaagactcactactcatcgtgaagttgttgatgtttctgatgagatggcgatatgttctgtcagtgctaagcaggacaatggtggtttctttgaagataaggggcaggtagacttcacaactcctttaatatctaaatctctgaatacagaaaatgaggaaattgtgaatgccagagttgaagtagtggaaaccctttgtgaacattctaatgagaaattagatattggggagggagagagttctgataagaggacagagagttcaaagggaaatttggacttggatgggctttgggatgatagtggtggattgtccaccatgaagattaaatttaagagtttctgcaagcctaggttggtgtttagagactatgagcttattcatgacgaagaccacatgcttcaagatcgtaagcaaagtgtaactgtgattggctttcccgaattattgtgggatcgggaaaactcttctcaggtaacgattttcaatcctaggttggaagctactttcttgaatcgaaacttggttgaatcatttgcgacaatatcggtgtcaatgtttgatttctctaagcatgcaaggaaacacaaggccattgattttcagcagttcatattgtgtcattttggcattagtgaattaatggcaactcttgaaggagcaaacttacaagctagtctacctaattggaaatttagactaaaattttcagctttacgtcacaaaggatattttgaatatgatttgcatattacaaacttgactgggagcatgagaataaatgcccataatctatttgttcacatgcatgagaggcaaattgaagccacatcgtcagccttgcattgttatggtttcattaattcaattatcaatgttggtattgagaccattgtgccatcattttgtcatacctgggattttcaaattcatcaacttgggccacccttgcctacttctggtcattttgaggtgataaattttgcaaactggcttcttggtttccagatctatttttcaattggtaccattggtttcaagatgatagtcattgcttccataggtgagatctgcagtcaaatactacaaccacaaatgtgcaattccatatttgcagcaatttctaccaaactgagcccatttgtgcttgttactctggacattgagctacacaatcaactttgcattgttcttgtccaagcatttgcaaaatcagaagtctggtttaatcatgttctagaggctctaggacttcatgaatggttggcaggagctattgaaattagaaatccttatgctttgcttttggctctgaaaatgggagaaaaagtttatgtggccagtgcaagatttgggagccagtggaagatttgtgggaaaattaaatgtggtgggaaaaaggagttgcacgtgattctctttaaaattcatggggagccacttgagatatgtttggggtatgctttatctactttggacgcaatttgtttacatgcccagaagctttgcttggttgattgggcttttgcaaatgtaccaatatcttgtaaggatgtggaaaccaagttgtttgctcttaatgtggccactgaggtactcctacaggaaggccaaatctttgatttctcgatcattatgcagttggttgtgattttgtccactaggcctttggatgaactaaagggcatcatatgtattctgcatagttctcttgcaaacattgatgactcctattctaagtggatctctatttttcaaacaattgctagacccttaatgttatttatggcagtgatgtatggacctttaaatttgcagatattgaggtggataggagagggtcgggagagcagtcacttccctttggaaaataaggaagaagtggtttgcgcagttagtctgatctttggttctattaataacaaagaattacagaacaacttattggctacattgctttcttctagctttgaagctattggggaatttgttgataaagatagtagccattgcctgagacaaaattctactacctataccaaagtgatcaatgatgaacttgctaaacattttgctcatactaagtttgcatcaactcctatgaggtattgttcttcttcagctaccttaatcgttgatactcttcttccttctatggcattagttatgtgtgttactgcttgtggtgtgatggagactataaaaaaagcacacattgatggaattgttgagaaagctaagaagaagcaacttgatattgttctgggattagttgatgatgctttggattctcaggctgggacacagaatttaccaaggcaaattctacatatgagtgggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0007154 GO:0007165 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0023052 GO:0031090 GO:0031965 GO:0031967 GO:0031975 GO:0033036 GO:0033218 GO:0033365 GO:0034504 GO:0034613 GO:0038023 GO:0042277 GO:0042802 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060089 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Xpo1

Protein Analysis

1030

Amino Acids

115.19

Weight (kDa)

6.84

Isoelectric Point (pI)

40.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005168)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g22470
rosa_chinensis	RchiOBHm_Chr4g0385821 RchiOBHm_Chr4g0393181 RchiOBHm_Chr4g0393191 RchiOBHm_Chr6g0274801 RchiOBHm_Chr7g0189981 RchiOBHm_Chr7g0189991
rosa_laevigata	RLG00000004572
rosa_multiflora	Rmu_sc0000365.1_g000052 Rmu_sc0000365.1_g000053 Rmu_sc0000827.1_g000018 Rmu_sc0001251.1_g000022 Rmu_sc0001266.1_g000003 Rmu_sc0001879.1_g000042 Rmu_sc0003069.1_g000022 Rmu_sc0004886.1_g000002 Rmu_sc0005120.1_g000011 Rmu_sc0005120.1_g000012 Rmu_sc0006153.1_g000015 Rmu_sc0014668.1_g000003
rosa_roxburghii	Rroxscaffold_1G00049180 Rroxscaffold_3G00241490 Rroxscaffold_3G00262780 Rroxscaffold_4G00276460 Rroxscaffold_4G00302780 Rroxscaffold_5G00359090 Rroxscaffold_5G00369400 Rroxscaffold_7G00165260
rosa_samantha	Rh6AG039900 Rh7CG111700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2641
Acc36I	ACCTGC	1 cut(s)	844
Acc65I	GGTACC	1 cut(s)	1775
AccB1I	GGYRCC	1 cut(s)	1775
AccI	GTMKAC	3 cut(s)	501, 858, 1429
AciI	CCGC	5 cut(s)	96, 109, 283, 348, 599
AclWI	GGATC	2 cut(s)	1212, 2501
AcoI	YGGCCR	2 cut(s)	2088, 2334
AcuI	CTGAAG	2 cut(s)	548, 2853
AcvI	CACGTG	1 cut(s)	2161
AfaI	GTAC	4 cut(s)	684, 1777, 2286, 2346
AfiI	CCNNNNNNNGG	2 cut(s)	270, 1709
AflIII	ACRYGT	1 cut(s)	675
AjiI	CACGTC	1 cut(s)	87
AjnI	CCWGG	2 cut(s)	563, 1664
AjuI	GAANNNNNNNTTGG	6 cut(s)	1256, 1288, 2243, 2275, 2678, 2710
AleI	CACNNNNGTG	1 cut(s)	1846
AloI	GAACNNNNNNTCC	2 cut(s)	994, 1026
Alw26I	GTCTC	4 cut(s)	1110, 1631, 2761, 2939
AlwI	GGATC	2 cut(s)	1212, 2501
AlwNI	CAGNNNCTG	1 cut(s)	641
AoxI	GGCC	7 cut(s)	584, 1341, 1691, 2088, 2334, 2359, 2414
ApeKI	GCWGC	5 cut(s)	146, 413, 416, 532, 1865
AseI	ATTAAT	3 cut(s)	1391, 1611, 2667
Asp700I	GAANNNNTTC	1 cut(s)	572
Asp718I	GGTACC	1 cut(s)	1775
AspA2I	CCTAGG	2 cut(s)	1100, 1241
AspLEI	GCGC	3 cut(s)	78, 332, 2642
AspS9I	GGNCC	5 cut(s)	237, 319, 609, 1691, 2552
AsuHPI	GGTGA	4 cut(s)	36, 226, 1735, 1826
AvaII	GGWCC	4 cut(s)	237, 319, 609, 2552
AvrII	CCTAGG	2 cut(s)	1100, 1241
BaeI	ACNNNNGTAYC	2 cut(s)	690, 723
BalI	TGGCCA	2 cut(s)	2090, 2336
BanI	GGYRCC	1 cut(s)	1775
BanII	GRGCYC	1 cut(s)	1889
BauI	CACGAG	1 cut(s)	702
BbrPI	CACGTG	1 cut(s)	2161
BbsI	GAAGAC	1 cut(s)	1146
BbvI	GCAGC	5 cut(s)	158, 400, 428, 544, 1877
BccI	CCATC	7 cut(s)	14, 492, 787, 1028, 1657, 2935, 2963
BcgI	CGANNNNNNTGC	2 cut(s)	2368, 2402
BciT130I	CCWGG	2 cut(s)	565, 1666
BclI	TGATCA	1 cut(s)	2796
BcoDI	GTCTC	4 cut(s)	1110, 1631, 2761, 2939
BfmI	CTRYAG	4 cut(s)	414, 633, 1822, 2351
BfoI	RGCGCY	2 cut(s)	79, 333
BfuAI	ACCTGC	1 cut(s)	844
BglII	AGATCT	2 cut(s)	1758, 1818
BisI	GCNGC	6 cut(s)	147, 283, 414, 417, 533, 1866
BlnI	CCTAGG	2 cut(s)	1100, 1241
BlpI	GCTNAGC	1 cut(s)	816
BlsI	GCNGC	6 cut(s)	148, 284, 415, 418, 534, 1867
Bme1390I	CCNGG	2 cut(s)	565, 1666
Bme18I	GGWCC	4 cut(s)	237, 319, 609, 2552
BmgBI	CACGTC	1 cut(s)	87
BmgT120I	GGNCC	5 cut(s)	237, 319, 609, 1691, 2552
BmiI	GGNNCC	5 cut(s)	239, 724, 1777, 2108, 2187
BmrFI	CCNGG	2 cut(s)	565, 1666
BmrI	ACTGGG	1 cut(s)	1524
BmsI	GCATC	6 cut(s)	349, 419, 586, 2445, 2849, 3019
BmuI	ACTGGG	1 cut(s)	1524
BpiI	GAAGAC	1 cut(s)	1146
Bpu10I	CCTNAGC	1 cut(s)	588
Bpu1102I	GCTNAGC	1 cut(s)	816
BpuEI	CTTGAG	2 cut(s)	491, 2213
BsaAI	YACGTR	1 cut(s)	2161
BsaI	GGTCTC	1 cut(s)	1631
BsaJI	CCNNGG	4 cut(s)	1100, 1241, 1665, 3065
BsaXI	ACNNNNNCTCC	2 cut(s)	2064, 2094
Bsc4I	CCNNNNNNNGG	2 cut(s)	270, 1709
Bse1I	ACTGG	8 cut(s)	47, 374, 430, 612, 1519, 1745, 2091, 2110
Bse3DI	GCAATG	3 cut(s)	1800, 2702, 2758
BseBI	CCWGG	2 cut(s)	565, 1666
BseDI	CCNNGG	4 cut(s)	1100, 1241, 1665, 3065
BseGI	GGATG	6 cut(s)	9, 434, 1039, 1051, 2308, 2428
BseLI	CCNNNNNNNGG	2 cut(s)	270, 1709
BseMI	GCAATG	3 cut(s)	1800, 2702, 2758
BseMII	CTCAG	6 cut(s)	81, 1235, 1874, 2331, 2756, 3056
BseNI	ACTGG	8 cut(s)	47, 374, 430, 612, 1519, 1745, 2091, 2110
BseXI	GCAGC	5 cut(s)	158, 400, 428, 544, 1877
BseYI	CCCAGC	1 cut(s)	3047
BshFI	GGCC	7 cut(s)	586, 1343, 1693, 2090, 2336, 2361, 2416
BshNI	GGYRCC	1 cut(s)	1775
BslFI	GGGAC	3 cut(s)	76, 223, 3064
BslI	CCNNNNNNNGG	2 cut(s)	270, 1709
BsmAI	GTCTC	4 cut(s)	1110, 1631, 2761, 2939
BsmFI	GGGAC	3 cut(s)	76, 223, 3064
BsmI	GAATGC	1 cut(s)	922
BsnI	GGCC	7 cut(s)	586, 1343, 1693, 2090, 2336, 2361, 2416
Bso31I	GGTCTC	1 cut(s)	1631
Bsp1286I	GDGCHC	1 cut(s)	1889
Bsp143I	GATC	8 cut(s)	1156, 1204, 1758, 1818, 2379, 2493, 2652, 2796
Bsp1720I	GCTNAGC	1 cut(s)	816
BspACI	CCGC	5 cut(s)	96, 109, 283, 348, 599
BspANI	GGCC	7 cut(s)	586, 1343, 1693, 2090, 2336, 2361, 2416
BspCNI	CTCAG	6 cut(s)	80, 1234, 1875, 2332, 2757, 3055
BspHI	TCATGA	2 cut(s)	1132, 2005
BspLI	GGNNCC	5 cut(s)	239, 724, 1777, 2108, 2187
BspMAI	CTGCAG	2 cut(s)	418, 1826
BspMI	ACCTGC	1 cut(s)	844
BspPI	GGATC	2 cut(s)	1212, 2501
BspT107I	GGYRCC	1 cut(s)	1775
BspTNI	GGTCTC	1 cut(s)	1631
BsrDI	GCAATG	3 cut(s)	1800, 2702, 2758
BsrI	ACTGG	8 cut(s)	47, 374, 430, 612, 1519, 1745, 2091, 2110
BssECI	CCNNGG	4 cut(s)	1100, 1241, 1665, 3065
BssMI	GATC	8 cut(s)	1156, 1204, 1758, 1818, 2379, 2493, 2652, 2796
BssSI	CACGAG	1 cut(s)	702
BssT1I	CCWWGG	3 cut(s)	1100, 1241, 3065
Bst2BI	CACGAG	1 cut(s)	702
Bst2UI	CCWGG	2 cut(s)	565, 1666
Bst4CI	ACNGT	2 cut(s)	637, 1177
Bst6I	CTCTTC	2 cut(s)	1222, 2898
BstBAI	YACGTR	1 cut(s)	2161
BstC8I	GCNNGC	4 cut(s)	276, 280, 1097, 1326
BstENI	CCTNNNNNAGG	1 cut(s)	268
BstF5I	GGATG	6 cut(s)	9, 434, 1039, 1051, 2308, 2428
BstH2I	RGCGCY	2 cut(s)	79, 333
BstHHI	GCGC	3 cut(s)	78, 332, 2642
BstKTI	GATC	8 cut(s)	1159, 1207, 1761, 1821, 2382, 2496, 2655, 2799
BstMAI	GTCTC	4 cut(s)	1110, 1631, 2761, 2939
BstMBI	GATC	8 cut(s)	1156, 1204, 1758, 1818, 2379, 2493, 2652, 2796
BstMWI	GCNNNNNNNGC	3 cut(s)	472, 1564, 1699
BstNI	CCWGG	2 cut(s)	565, 1666
BstNSI	RCATGY	6 cut(s)	508, 679, 1150, 1328, 1558, 2246
BstSCI	CCNGG	2 cut(s)	563, 1664
BstSFI	CTRYAG	4 cut(s)	414, 633, 1822, 2351
BstV1I	GCAGC	5 cut(s)	158, 400, 428, 544, 1877
BstV2I	GAAGAC	1 cut(s)	1146
BstX2I	RGATCY	3 cut(s)	1758, 1818, 2493
BstXI	CCANNNNNNTGG	1 cut(s)	302
BstYI	RGATCY	3 cut(s)	1758, 1818, 2493
BsuRI	GGCC	7 cut(s)	586, 1343, 1693, 2090, 2336, 2361, 2416
BtrI	CACGTC	1 cut(s)	87
BtsCI	GGATG	6 cut(s)	9, 434, 1039, 1051, 2308, 2428
BtsI	GCAGTG	1 cut(s)	2547
BtsIMutI	CAGTG	5 cut(s)	817, 2098, 2117, 2337, 2547
BveI	ACCTGC	1 cut(s)	844
Cac8I	GCNNGC	4 cut(s)	276, 280, 1097, 1326
CaiI	CAGNNNCTG	1 cut(s)	641
CciI	TCATGA	2 cut(s)	1132, 2005
CfoI	GCGC	3 cut(s)	78, 332, 2642
Cfr13I	GGNCC	5 cut(s)	237, 319, 609, 1691, 2552
CpoI	CGGWCCG	1 cut(s)	319
CseI	GACGC	1 cut(s)	2237
Csp6I	GTAC	4 cut(s)	683, 1776, 2285, 2345
CspI	CGGWCCG	1 cut(s)	319
CviQI	GTAC	4 cut(s)	683, 1776, 2285, 2345
DpnI	GATC	8 cut(s)	1158, 1206, 1760, 1820, 2381, 2495, 2654, 2798
DpnII	GATC	8 cut(s)	1156, 1204, 1758, 1818, 2379, 2493, 2652, 2796
DraI	TTTAAA	2 cut(s)	2173, 2559
EaeI	YGGCCR	2 cut(s)	2088, 2334
Eam1104I	CTCTTC	2 cut(s)	1222, 2898
EarI	CTCTTC	2 cut(s)	1222, 2898
EciI	GGCGGA	1 cut(s)	98
Eco130I	CCWWGG	3 cut(s)	1100, 1241, 3065
Eco147I	AGGCCT	2 cut(s)	586, 2416
Eco24I	GRGCYC	1 cut(s)	1889
Eco31I	GGTCTC	1 cut(s)	1631
Eco47I	GGWCC	4 cut(s)	237, 319, 609, 2552
Eco57I	CTGAAG	2 cut(s)	548, 2853
Eco72I	CACGTG	1 cut(s)	2161
EcoNI	CCTNNNNNAGG	1 cut(s)	268
EcoO109I	RGGNCCY	1 cut(s)	237
EcoRII	CCWGG	2 cut(s)	563, 1664
EcoT14I	CCWWGG	3 cut(s)	1100, 1241, 3065
EcoT22I	ATGCAT	1 cut(s)	1560
EcoT38I	GRGCYC	1 cut(s)	1889
ErhI	CCWWGG	3 cut(s)	1100, 1241, 3065
FalI	AAGNNNNNCTT	2 cut(s)	2243, 2275
FaqI	GGGAC	3 cut(s)	76, 223, 3064
FauI	CCCGC	1 cut(s)	103
FauNDI	CATATG	2 cut(s)	2441, 3081
FbaI	TGATCA	1 cut(s)	2796
FblI	GTMKAC	3 cut(s)	501, 858, 1429
Fnu4HI	GCNGC	6 cut(s)	147, 283, 414, 417, 533, 1866
FokI	GGATG	5 cut(s)	441, 1046, 1058, 2315, 2435
FriOI	GRGCYC	1 cut(s)	1889
Fsp4HI	GCNGC	6 cut(s)	147, 283, 414, 417, 533, 1866
FspI	TGCGCA	1 cut(s)	2641
GlaI	GCGC	3 cut(s)	77, 331, 2641
GluI	GCNGC	6 cut(s)	147, 283, 414, 417, 533, 1866
GsaI	CCCAGC	1 cut(s)	3051
HaeII	RGCGCY	2 cut(s)	79, 333
HaeIII	GGCC	7 cut(s)	586, 1343, 1693, 2090, 2336, 2361, 2416
HgaI	GACGC	1 cut(s)	2237
HhaI	GCGC	3 cut(s)	78, 332, 2642
Hin6I	GCGC	3 cut(s)	76, 330, 2640
HinP1I	GCGC	3 cut(s)	76, 330, 2640
HindIII	AAGCTT	1 cut(s)	2252
HphI	GGTGA	4 cut(s)	36, 226, 1735, 1826
Hpy99I	CGWCG	1 cut(s)	91
HpyAV	CCTTC	6 cut(s)	112, 236, 449, 1400, 2351, 2910
HpyCH4III	ACNGT	2 cut(s)	637, 1177
HpyCH4IV	ACGT	3 cut(s)	86, 1468, 2160
HpyF10VI	GCNNNNNNNGC	3 cut(s)	472, 1564, 1699
HpySE526I	ACGT	3 cut(s)	86, 1468, 2160
HspAI	GCGC	3 cut(s)	76, 330, 2640
KpnI	GGTACC	1 cut(s)	1779
Ksp22I	TGATCA	1 cut(s)	2796
Kzo9I	GATC	8 cut(s)	1156, 1204, 1758, 1818, 2379, 2493, 2652, 2796
LmnI	GCTCC	6 cut(s)	179, 1409, 1518, 2021, 2106, 2185
Lsp1109I	GCAGC	5 cut(s)	158, 400, 428, 544, 1877
LweI	GCATC	6 cut(s)	349, 419, 586, 2445, 2849, 3019
MaeII	ACGT	3 cut(s)	86, 1468, 2160
MaeIII	GTNAC	7 cut(s)	421, 1171, 1225, 1469, 1900, 2603, 2923
MalI	GATC	8 cut(s)	1158, 1206, 1760, 1820, 2381, 2495, 2654, 2798
MboI	GATC	8 cut(s)	1156, 1204, 1758, 1818, 2379, 2493, 2652, 2796
MfeI	CAATTG	2 cut(s)	1770, 2511
MflI	RGATCY	3 cut(s)	1758, 1818, 2493
MhlI	GDGCHC	1 cut(s)	1889
MlsI	TGGCCA	2 cut(s)	2090, 2336
MluNI	TGGCCA	2 cut(s)	2090, 2336
MlyI	GAGTC	2 cut(s)	747, 2471
MmeI	TCCRAC	1 cut(s)	1227
Mox20I	TGGCCA	2 cut(s)	2090, 2336
Mph1103I	ATGCAT	1 cut(s)	1560
MroXI	GAANNNNTTC	1 cut(s)	572
MscI	TGGCCA	2 cut(s)	2090, 2336
MslI	CAYNNNNRTG	6 cut(s)	957, 1557, 1599, 1846, 2967, 3084
Msp20I	TGGCCA	2 cut(s)	2090, 2336
MspA1I	CMGCKG	1 cut(s)	419
MspR9I	CCNGG	2 cut(s)	565, 1666
MunI	CAATTG	2 cut(s)	1770, 2511
Mva1269I	GAATGC	1 cut(s)	922
MvaI	CCWGG	2 cut(s)	565, 1666
MwoI	GCNNNNNNNGC	3 cut(s)	472, 1564, 1699
NdeI	CATATG	2 cut(s)	2441, 3081
NdeII	GATC	8 cut(s)	1156, 1204, 1758, 1818, 2379, 2493, 2652, 2796
NlaIV	GGNNCC	5 cut(s)	239, 724, 1777, 2108, 2187
NmuCI	GTSAC	3 cut(s)	421, 1469, 2603
NsbI	TGCGCA	1 cut(s)	2641
NsiI	ATGCAT	1 cut(s)	1560
NspI	RCATGY	6 cut(s)	508, 679, 1150, 1328, 1558, 2246
OliI	CACNNNNGTG	1 cut(s)	1846
PaeI	GCATGC	1 cut(s)	1328
PagI	TCATGA	2 cut(s)	1132, 2005
PceI	AGGCCT	2 cut(s)	586, 2416
PciI	ACATGT	1 cut(s)	675
PctI	GAATGC	1 cut(s)	922
PdmI	GAANNNNTTC	1 cut(s)	572
PfeI	GAWTC	8 cut(s)	208, 308, 452, 644, 1264, 1280, 2164, 3038
PkrI	GCNGC	6 cut(s)	148, 284, 415, 418, 534, 1867
PleI	GAGTC	2 cut(s)	747, 2471
PmaCI	CACGTG	1 cut(s)	2161
PmlI	CACGTG	1 cut(s)	2161
PpsI	GAGTC	2 cut(s)	747, 2471
Ppu21I	YACGTR	1 cut(s)	2161
PpuMI	RGGWCCY	1 cut(s)	237
PscI	ACATGT	1 cut(s)	675
PshBI	ATTAAT	3 cut(s)	1391, 1611, 2667
Psp5II	RGGWCCY	1 cut(s)	237
Psp6I	CCWGG	2 cut(s)	563, 1664
PspCI	CACGTG	1 cut(s)	2161
PspFI	CCCAGC	1 cut(s)	3047
PspGI	CCWGG	2 cut(s)	563, 1664
PspN4I	GGNNCC	5 cut(s)	239, 724, 1777, 2108, 2187
PspPI	GGNCC	5 cut(s)	237, 319, 609, 1691, 2552
PspPPI	RGGWCCY	1 cut(s)	237
PstI	CTGCAG	2 cut(s)	418, 1826
PstNI	CAGNNNCTG	1 cut(s)	641
PsuI	RGATCY	3 cut(s)	1758, 1818, 2493
PvuII	CAGCTG	1 cut(s)	419
RsaI	GTAC	4 cut(s)	684, 1777, 2286, 2346
RsaNI	GTAC	4 cut(s)	683, 1776, 2285, 2345
RseI	CAYNNNNRTG	6 cut(s)	957, 1557, 1599, 1846, 2967, 3084
Rsr2I	CGGWCCG	1 cut(s)	319
RsrII	CGGWCCG	1 cut(s)	319
SatI	GCNGC	6 cut(s)	147, 283, 414, 417, 533, 1866
Sau3AI	GATC	8 cut(s)	1156, 1204, 1758, 1818, 2379, 2493, 2652, 2796
Sau96I	GGNCC	5 cut(s)	237, 319, 609, 1691, 2552
SchI	GAGTC	2 cut(s)	747, 2471
ScrFI	CCNGG	2 cut(s)	565, 1666
SduI	GDGCHC	1 cut(s)	1889
SfaNI	GCATC	6 cut(s)	349, 419, 586, 2445, 2849, 3019
SfcI	CTRYAG	4 cut(s)	414, 633, 1822, 2351
SinI	GGWCC	4 cut(s)	237, 319, 609, 2552
SmiMI	CAYNNNNRTG	6 cut(s)	957, 1557, 1599, 1846, 2967, 3084
SmlI	CTYRAG	2 cut(s)	470, 2192
SmoI	CTYRAG	2 cut(s)	470, 2192
SphI	GCATGC	1 cut(s)	1328
SseBI	AGGCCT	2 cut(s)	586, 2416
SsiI	CCGC	5 cut(s)	96, 109, 283, 348, 599
StuI	AGGCCT	2 cut(s)	586, 2416
StyD4I	CCNGG	2 cut(s)	563, 1664
StyI	CCWWGG	3 cut(s)	1100, 1241, 3065
TaaI	ACNGT	2 cut(s)	637, 1177
TaiI	ACGT	3 cut(s)	89, 1471, 2163
TaqI	TCGA	5 cut(s)	366, 510, 576, 1267, 2378
TaqII	GACCGA	1 cut(s)	336
TauI	GCSGC	1 cut(s)	285
TfiI	GAWTC	8 cut(s)	208, 308, 452, 644, 1264, 1280, 2164, 3038
TscAI	CASTG	5 cut(s)	817, 2098, 2117, 2344, 2547
TseFI	GTSAC	3 cut(s)	421, 1469, 2603
TseI	GCWGC	5 cut(s)	146, 413, 416, 532, 1865
Tsp45I	GTSAC	3 cut(s)	421, 1469, 2603
TspGWI	ACGGA	2 cut(s)	332, 385
TspRI	CASTG	5 cut(s)	817, 2098, 2117, 2344, 2547
VpaK11BI	GGWCC	4 cut(s)	237, 319, 609, 2552
VspI	ATTAAT	3 cut(s)	1391, 1611, 2667
XagI	CCTNNNNNAGG	1 cut(s)	268
XbaI	TCTAGA	1 cut(s)	1987
XceI	RCATGY	6 cut(s)	508, 679, 1150, 1328, 1558, 2246
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2416
XmaJI	CCTAGG	2 cut(s)	1100, 1241
XmiI	GTMKAC	3 cut(s)	501, 858, 1429
XmnI	GAANNNNTTC	1 cut(s)	572
Zsp2I	ATGCAT	1 cut(s)	1560

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.