Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004886.1

Orthogroup ID

OG0005168

Physical Location & Seq

Genomic Coordinates Forward (+)

4551 .. 8037

Gene Structure 3487 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004886.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3153 bp

atggttagggctcctaccctaacaactggtatcagagcccacatcatggggccgaggggcactgggaatccaccaccatgctcatcaacacctccgcgtccacctgacctagaggaagtcaggaggaagaggatccaaatcgcgaaagaacaggcagttgcgtggcaccgtgaactcgagaaaactatggcgtcgttcaagtccgagtttctaaacgagttgaggcaatttcgattggagctcataactccggtgatggagcagttggtgccaacttcttccgtaccaatcatatccctgcgagtgactcagtctgtctcttcggggctgcaatttgggaccatcgaatcttacaaaccgccaccaccaccaccggccatggtggatccatacccttaccagcagcaagaacggccacctccgtctcggtctagaccaccagtccctcagccgcagcacgcggatccctacggttacgagctgcaacaaccgccacctccgccgcctagaccattagtcctcaaacagccacaattctctttgaatggtgattgtggtgctgtcaaattaactggttttgataagaaattagatgttgaggagggagagaattctgagaagatagttaaggtgaatagtgggaactcagaagggctgtgtgatgcaaaaaggatcgggttttgtaatgcaggaaggaccattatggctcctatgagcattagagacaaagagggaggactcgctactccttgtgaagttgttgatgcttctgactatttaggctatcccaaagcacgttccgaggtccattgtactatccaccttgctgctgtcagtgagatagcaatatgttttgtcagttgtaagcaggacaatggtggtttcattgaagataaggagctggagcagagtttgtctggacacactagtggcattgattcagtaagctttgattcttcagaggtcttagtagttgcaggcgctgcaagtggtacaattaagctttgggatttagaggaggccaaaattgtttgcacccttactggttacagatctaattgtatatctgtcgacttccatccttttggagcgttatttgcatctggctccctggacacaaatttaaaaatatgggatatcaggaagaaggggtgtattcacacatacaaaggccacacacgaggagtcaatgccattacgtttaccccagatggacgttgggttgtttctggtggagatgacaacactgtgaagctgtgggatctgactgatggaaagctcttgcatgattttaaatgtaatgagggccagatacaatgcataggctttcatccccatgagttcctgctcgcaacaggttcatcagatgggacagattcttttgacaacacattggttgatacagttgttgactttctcaaaagcaatgcaacgttatattttatgaggtacacttctaatgcacttctttcaaaagataattgtgtaggcttttggactaatatgtacaagctttttcaacacatggtgggacatgttcataaggatgagcttttcatggcaacgtgctcttccatttctcatccaccattccatgcacttgtgaagaaattgtctctctttttacctatggttgctatccagtcattacaaccacttttggctaatatattgagagaagatgcacagtttatttttggaattatgagggttgtgcacatcatttttcaagatggatggttgttgattcatgaacaagagcgaggtcttgccaagagcactataattgcagggtattgtcaagcaggttatgtggaaaaagcttttgagtatttgtggtggatgagaatggatgtaccaaacccaaatgagtatgcttttactcgtgtaccaagtgtttgtggaaccatggcgatgcttgctcaaggaaagcaattgcatgctcatgtgctaactgttgttctagactgtgaagctatggtacaaagtgccttggtcaatttgcacttcaaatgtggaagttcacaagaagctgcaaaaatctttgatgtgacaaaagttgatgatcacctatttgacttatacataattttcattgagcctctaattgcttgctacttgagatacatagataagcatctcagacatggaagatatgaagatgtggaggtatcagagaagtggtttctggatgtgatgaatatgaatttggagaccatggttggaaaaattaaatgtggtggggaaaagagactgcatatggatctctttaaaattcacagggggccacttgagaaatgtttggggtatgctctacctattttggatgcgatttgtttatgtgcccagaagcttttcttggttgattgggcttttgcagatgtaccaatatcttggaaggatgtggaaaccaagttgtttgctctttacttccctaacttcatgattgcattcatcgaatttggcttcgtggcaattgatgttggagctcttgcattggttcctcaaatacacttttcagtacacatgtggacaaatgaagctcttctactcgtcctgttgtctgcaattatgcactcccagacaatggaattcgtaatttcaagcattctattgcagagtcccaatagagaagccttgagggttttttctaatatgcaaaatttatatcatcggcaatcaaattttatttctcaggtgtgtgttcatctatgtgcactactccatgctcggcaagttactacagatgatggatacttgcaattggatgataaattgggctgtgatcttatgactatggataatgagagcgagttggttatgtatactggatgtcagactccacagatctgttggtcaataacatatgagagcaggaaaagcaataacaatatcagtggcaagacttgctatgtctctctagtgtccaattcattgaatttgtatttaacaatattgctgccatatggaatttttgaggtgggagaagattctgtaagtggtatattttgctcgcaattgttgctggacttggtaggaaaaatgttgcagatttggacatgggaaaatggaggatttttgcagactcagatgactgttgaggcaagggattttcaaaaaaagaacaatgtgttgtcatcaactggtctatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00051 map00051

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

1050

Amino Acids

117.57

Weight (kDa)

5.89

Isoelectric Point (pI)

38.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005168)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g22470
rosa_chinensis	RchiOBHm_Chr4g0385821 RchiOBHm_Chr4g0393181 RchiOBHm_Chr4g0393191 RchiOBHm_Chr6g0274801 RchiOBHm_Chr7g0189981 RchiOBHm_Chr7g0189991
rosa_laevigata	RLG00000004572
rosa_multiflora	Rmu_sc0000365.1_g000052 Rmu_sc0000365.1_g000053 Rmu_sc0000827.1_g000018 Rmu_sc0001251.1_g000022 Rmu_sc0001266.1_g000003 Rmu_sc0001879.1_g000042 Rmu_sc0003069.1_g000022 Rmu_sc0004886.1_g000002 Rmu_sc0005120.1_g000011 Rmu_sc0005120.1_g000012 Rmu_sc0006153.1_g000015 Rmu_sc0014668.1_g000003
rosa_roxburghii	Rroxscaffold_1G00049180 Rroxscaffold_3G00241490 Rroxscaffold_3G00262780 Rroxscaffold_4G00276460 Rroxscaffold_4G00302780 Rroxscaffold_5G00359090 Rroxscaffold_5G00369400 Rroxscaffold_7G00165260
rosa_samantha	Rh6AG039900 Rh7CG111700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1796
AccB1I	GGYRCC	2 cut(s)	165, 268
AccB7I	CCANNNNNTGG	2 cut(s)	46, 2587
AccI	GTMKAC	2 cut(s)	1071, 2825
AccII	CGCG	3 cut(s)	97, 143, 461
AciI	CCGC	7 cut(s)	95, 359, 452, 461, 491, 500, 503
AclI	AACGTT	1 cut(s)	1433
AclWI	GGATC	9 cut(s)	127, 140, 380, 393, 458, 471, 680, 1269, 2271
AcoI	YGGCCR	2 cut(s)	375, 413
AcuI	CTGAAG	1 cut(s)	942
AcyI	GRCGYC	1 cut(s)	191
AdeI	CACNNNGTG	1 cut(s)	1528
AfiI	CCNNNNNNNGG	2 cut(s)	46, 2587
AflIII	ACRYGT	2 cut(s)	1534, 2526
AhdI	GACNNNNNGTC	2 cut(s)	440, 515
AhlI	ACTAGT	1 cut(s)	926
AjnI	CCWGG	1 cut(s)	1110
AjuI	GAANNNNNNNTTGG	4 cut(s)	2192, 2224, 2342, 2374
AleI	CACNNNNGTG	1 cut(s)	927
Alw21I	GWGCWC	6 cut(s)	243, 1571, 1719, 1781, 2491, 2719
Alw26I	GTCTC	7 cut(s)	322, 429, 717, 1620, 2207, 2245, 2920
Alw44I	GTGCAC	2 cut(s)	1715, 2715
AlwI	GGATC	9 cut(s)	127, 140, 380, 393, 458, 471, 680, 1269, 2271
AlwNI	CAGNNNCTG	1 cut(s)	983
Ama87I	CYCGRG	1 cut(s)	176
AoxI	GGCC	7 cut(s)	50, 375, 413, 1020, 1171, 1306, 2285
ApaLI	GTGCAC	2 cut(s)	1715, 2715
ApeKI	GCWGC	8 cut(s)	328, 403, 454, 481, 827, 983, 2033, 2959
Asp700I	GAANNNNTTC	2 cut(s)	2354, 2544
AspLEI	GCGC	1 cut(s)	983
AspS9I	GGNCC	6 cut(s)	50, 339, 696, 805, 1306, 2285
AsuHPI	GGTGA	4 cut(s)	265, 560, 643, 2060
AvaI	CYCGRG	1 cut(s)	176
AvaII	GGWCC	3 cut(s)	339, 696, 805
BaeGI	GKGCMC	4 cut(s)	62, 1719, 2347, 2719
BaeI	ACNNNNGTAYC	4 cut(s)	1392, 1425, 1872, 1905
BamHI	GGATCC	3 cut(s)	132, 385, 463
BanI	GGYRCC	2 cut(s)	165, 268
BanII	GRGCYC	4 cut(s)	13, 40, 243, 2491
BarI	GAAGNNNNNNTAC	4 cut(s)	1965, 1997, 2532, 2564
BauI	CACGAG	2 cut(s)	1179, 1884
Bbv12I	GWGCWC	6 cut(s)	243, 1571, 1719, 1781, 2491, 2719
BbvCI	CCTCAGC	1 cut(s)	447
BbvI	GCAGC	8 cut(s)	315, 415, 466, 468, 814, 970, 2020, 2946
BccI	CCATC	9 cut(s)	250, 350, 1086, 1205, 1265, 1361, 1727, 1731, 2744
BceAI	ACGGC	1 cut(s)	428
BciT130I	CCWGG	1 cut(s)	1112
BciVI	GTATCC	1 cut(s)	2747
BclI	TGATCA	1 cut(s)	2065
BcoDI	GTCTC	7 cut(s)	322, 429, 717, 1620, 2207, 2245, 2920
BcuI	ACTAGT	1 cut(s)	926
BfaI	CTAG	6 cut(s)	110, 432, 507, 927, 1964, 2921
BfmI	CTRYAG	2 cut(s)	2742, 3149
BfoI	RGCGCY	1 cut(s)	984
BfuAI	ACCTGC	1 cut(s)	1796
BfuI	GTATCC	1 cut(s)	2747
BglII	AGATCT	2 cut(s)	1052, 2847
Bme1390I	CCNGG	1 cut(s)	1112
Bme18I	GGWCC	3 cut(s)	339, 696, 805
BmeRI	GACNNNNNGTC	2 cut(s)	440, 515
BmeT110I	CYCGRG	1 cut(s)	176
BmgT120I	GGNCC	6 cut(s)	50, 339, 696, 805, 1306, 2285
BmrFI	CCNGG	1 cut(s)	1112
BmrI	ACTGGG	1 cut(s)	72
BmsI	GCATC	7 cut(s)	652, 754, 1109, 1672, 1905, 2146, 2317
BmuI	ACTGGG	1 cut(s)	72
BpmI	CTGGAG	1 cut(s)	923
Bpu10I	CCTNAGC	1 cut(s)	447
BpuEI	CTTGAG	4 cut(s)	1908, 2140, 2312, 2659
BsaBI	GATNNNNATC	2 cut(s)	137, 2136
BsaHI	GRCGYC	1 cut(s)	191
BsaI	GGTCTC	1 cut(s)	2207
BsaJI	CCNNGG	7 cut(s)	53, 378, 801, 1110, 1908, 1992, 2217
BsaWI	WCCGGW	1 cut(s)	250
Bsc4I	CCNNNNNNNGG	2 cut(s)	46, 2587
Bse118I	RCCGGY	1 cut(s)	373
Bse1I	ACTGG	8 cut(s)	31, 67, 440, 577, 1048, 1642, 2833, 3148
Bse3DI	GCAATG	1 cut(s)	1432
Bse8I	GATNNNNATC	2 cut(s)	137, 2136
BseBI	CCWGG	1 cut(s)	1112
BseDI	CCNNGG	7 cut(s)	53, 378, 801, 1110, 1908, 1992, 2217
BseJI	GATNNNNATC	2 cut(s)	137, 2136
BseLI	CCNNNNNNNGG	2 cut(s)	46, 2587
BseMI	GCAATG	1 cut(s)	1432
BseMII	CTCAG	7 cut(s)	323, 461, 606, 660, 2155, 2708, 3101
BseNI	ACTGG	8 cut(s)	31, 67, 440, 577, 1048, 1642, 2833, 3148
BseRI	GAGGAG	3 cut(s)	614, 1031, 1197
BseSI	GKGCMC	4 cut(s)	62, 1719, 2347, 2719
BseXI	GCAGC	8 cut(s)	315, 415, 466, 468, 814, 970, 2020, 2946
Bsh1236I	CGCG	3 cut(s)	97, 143, 461
BshFI	GGCC	7 cut(s)	52, 377, 415, 1022, 1173, 1308, 2287
BshNI	GGYRCC	2 cut(s)	165, 268
BsiHKAI	GWGCWC	6 cut(s)	243, 1571, 1719, 1781, 2491, 2719
BsiHKCI	CYCGRG	1 cut(s)	176
BsiSI	CCGG	2 cut(s)	251, 374
BslFI	GGGAC	5 cut(s)	352, 428, 1384, 1545, 2607
BslI	CCNNNNNNNGG	2 cut(s)	46, 2587
BsmAI	GTCTC	7 cut(s)	322, 429, 717, 1620, 2207, 2245, 2920
BsmBI	CGTCTC	1 cut(s)	429
BsmFI	GGGAC	5 cut(s)	352, 428, 1384, 1545, 2607
BsmI	GAATGC	2 cut(s)	2450, 2607
BsnI	GGCC	7 cut(s)	52, 377, 415, 1022, 1173, 1308, 2287
Bso31I	GGTCTC	1 cut(s)	2207
BsoBI	CYCGRG	1 cut(s)	176
Bsp1407I	TGTACA	1 cut(s)	1506
Bsp19I	CCATGG	3 cut(s)	378, 1908, 2217
Bsp68I	TCGCGA	1 cut(s)	143
BspACI	CCGC	7 cut(s)	95, 359, 452, 461, 491, 500, 503
BspANI	GGCC	7 cut(s)	52, 377, 415, 1022, 1173, 1308, 2287
BspCNI	CTCAG	7 cut(s)	322, 460, 607, 659, 2154, 2707, 3100
BspFNI	CGCG	3 cut(s)	97, 143, 461
BspHI	TCATGA	2 cut(s)	1750, 2442
BspMI	ACCTGC	1 cut(s)	1796
BspPI	GGATC	9 cut(s)	127, 140, 380, 393, 458, 471, 680, 1269, 2271
BspQI	GCTCTTC	2 cut(s)	1576, 2550
BspT107I	GGYRCC	2 cut(s)	165, 268
BspTNI	GGTCTC	1 cut(s)	2207
BsrDI	GCAATG	1 cut(s)	1432
BsrFI	RCCGGY	1 cut(s)	373
BsrGI	TGTACA	1 cut(s)	1506
BsrI	ACTGG	8 cut(s)	31, 67, 440, 577, 1048, 1642, 2833, 3148
BssAI	RCCGGY	1 cut(s)	373
BssECI	CCNNGG	7 cut(s)	53, 378, 801, 1110, 1908, 1992, 2217
BssNAI	GTATAC	1 cut(s)	2826
BssNI	GRCGYC	1 cut(s)	191
BssSI	CACGAG	2 cut(s)	1179, 1884
BssT1I	CCWWGG	4 cut(s)	378, 1908, 1992, 2217
Bst1107I	GTATAC	1 cut(s)	2826
Bst2BI	CACGAG	2 cut(s)	1179, 1884
Bst2UI	CCWGG	1 cut(s)	1112
Bst4CI	ACNGT	8 cut(s)	170, 473, 1249, 1405, 1689, 1957, 1970, 3097
Bst6I	CTCTTC	4 cut(s)	122, 325, 1576, 2550
BstACI	GRCGYC	1 cut(s)	191
BstAPI	GCANNNNNTGC	4 cut(s)	268, 983, 2907, 3022
BstAUI	TGTACA	1 cut(s)	1506
BstC8I	GCNNGC	7 cut(s)	459, 979, 1350, 1920, 1941, 2113, 3014
BstDEI	CTNAG	8 cut(s)	309, 447, 615, 646, 967, 2141, 2694, 3087
BstDSI	CCRYGG	3 cut(s)	378, 1908, 2217
BstFNI	CGCG	3 cut(s)	97, 143, 461
BstH2I	RGCGCY	1 cut(s)	984
BstHHI	GCGC	1 cut(s)	983
BstMAI	GTCTC	7 cut(s)	322, 429, 717, 1620, 2207, 2245, 2920
BstNI	CCWGG	1 cut(s)	1112
BstNSI	RCATGY	3 cut(s)	1538, 1943, 2530
BstSCI	CCNGG	1 cut(s)	1110
BstSFI	CTRYAG	2 cut(s)	2742, 3149
BstSLI	GKGCMC	4 cut(s)	62, 1719, 2347, 2719
BstUI	CGCG	3 cut(s)	97, 143, 461
BstV1I	GCAGC	8 cut(s)	315, 415, 466, 468, 814, 970, 2020, 2946
BstX2I	RGATCY	7 cut(s)	132, 385, 463, 1052, 1261, 2263, 2847
BstXI	CCANNNNNNTGG	2 cut(s)	1085, 2394
BstYI	RGATCY	7 cut(s)	132, 385, 463, 1052, 1261, 2263, 2847
BstZ17I	GTATAC	1 cut(s)	2826
BsuI	GTATCC	1 cut(s)	2747
BsuRI	GGCC	7 cut(s)	52, 377, 415, 1022, 1173, 1308, 2287
BtgI	CCRYGG	3 cut(s)	378, 1908, 2217
BtgZI	GCGATG	1 cut(s)	1928
BtsIMutI	CAGTG	4 cut(s)	60, 841, 1245, 2902
BtuMI	TCGCGA	1 cut(s)	143
BveI	ACCTGC	1 cut(s)	1796
Cac8I	GCNNGC	7 cut(s)	459, 979, 1350, 1920, 1941, 2113, 3014
CaiI	CAGNNNCTG	1 cut(s)	983
CciI	TCATGA	2 cut(s)	1750, 2442
CfoI	GCGC	1 cut(s)	983
Cfr10I	RCCGGY	1 cut(s)	373
Cfr13I	GGNCC	6 cut(s)	50, 339, 696, 805, 1306, 2285
CseI	GACGC	2 cut(s)	86, 180
CspCI	CAANNNNNGTGG	2 cut(s)	2878, 2913
DdeI	CTNAG	8 cut(s)	309, 447, 615, 646, 967, 2141, 2694, 3087
DraI	TTTAAA	3 cut(s)	1125, 1294, 2272
DraIII	CACNNNGTG	1 cut(s)	1528
DriI	GACNNNNNGTC	2 cut(s)	440, 515
EaeI	YGGCCR	2 cut(s)	375, 413
Eam1104I	CTCTTC	4 cut(s)	122, 325, 1576, 2550
Eam1105I	GACNNNNNGTC	2 cut(s)	440, 515
EarI	CTCTTC	4 cut(s)	122, 325, 1576, 2550
EciI	GGCGGA	1 cut(s)	489
Ecl136II	GAGCTC	2 cut(s)	241, 2489
Eco130I	CCWWGG	4 cut(s)	378, 1908, 1992, 2217
Eco24I	GRGCYC	4 cut(s)	13, 40, 243, 2491
Eco31I	GGTCTC	1 cut(s)	2207
Eco32I	GATATC	1 cut(s)	1138
Eco47I	GGWCC	3 cut(s)	339, 696, 805
Eco53kI	GAGCTC	2 cut(s)	241, 2489
Eco57I	CTGAAG	1 cut(s)	942
Eco88I	CYCGRG	1 cut(s)	176
EcoICRI	GAGCTC	2 cut(s)	241, 2489
EcoRI	GAATTC	2 cut(s)	610, 2591
EcoRII	CCWGG	1 cut(s)	1110
EcoRV	GATATC	1 cut(s)	1138
EcoT14I	CCWWGG	4 cut(s)	378, 1908, 1992, 2217
EcoT22I	ATGCAT	1 cut(s)	1322
EcoT38I	GRGCYC	4 cut(s)	13, 40, 243, 2491
ErhI	CCWWGG	4 cut(s)	378, 1908, 1992, 2217
Esp3I	CGTCTC	1 cut(s)	429
FalI	AAGNNNNNCTT	2 cut(s)	2342, 2374
FaqI	GGGAC	5 cut(s)	352, 428, 1384, 1545, 2607
FauNDI	CATATG	3 cut(s)	2259, 2866, 2965
FbaI	TGATCA	1 cut(s)	2065
FblI	GTMKAC	2 cut(s)	1071, 2825
FriOI	GRGCYC	4 cut(s)	13, 40, 243, 2491
FspBI	CTAG	6 cut(s)	110, 432, 507, 927, 1964, 2921
GlaI	GCGC	1 cut(s)	982
GsuI	CTGGAG	1 cut(s)	923
HaeII	RGCGCY	1 cut(s)	984
HaeIII	GGCC	7 cut(s)	52, 377, 415, 1022, 1173, 1308, 2287
HapII	CCGG	2 cut(s)	251, 374
HgaI	GACGC	2 cut(s)	86, 180
HhaI	GCGC	1 cut(s)	983
Hin1I	GRCGYC	1 cut(s)	191
Hin6I	GCGC	1 cut(s)	981
HinP1I	GCGC	1 cut(s)	981
HincII	GTYRAC	2 cut(s)	1072, 1411
HindII	GTYRAC	2 cut(s)	1072, 1411
HindIII	AAGCTT	5 cut(s)	946, 1001, 1511, 1821, 2351
HpaII	CCGG	2 cut(s)	251, 374
HphI	GGTGA	4 cut(s)	265, 560, 643, 2060
Hpy99I	CGWCG	1 cut(s)	196
HpyAV	CCTTC	4 cut(s)	644, 687, 1141, 2392
HpyCH4III	ACNGT	8 cut(s)	170, 473, 1249, 1405, 1689, 1957, 1970, 3097
HpyCH4IV	ACGT	5 cut(s)	796, 1199, 1216, 1433, 1565
HpyF3I	CTNAG	8 cut(s)	309, 447, 615, 646, 967, 2141, 2694, 3087
HpySE526I	ACGT	5 cut(s)	796, 1199, 1216, 1433, 1565
Hsp92I	GRCGYC	1 cut(s)	191
HspAI	GCGC	1 cut(s)	981
Ksp22I	TGATCA	1 cut(s)	2065
LguI	GCTCTTC	2 cut(s)	1576, 2550
LmnI	GCTCC	9 cut(s)	16, 238, 259, 712, 898, 904, 1088, 1112, 2486
Lsp1109I	GCAGC	8 cut(s)	315, 415, 466, 468, 814, 970, 2020, 2946
LweI	GCATC	7 cut(s)	652, 754, 1109, 1672, 1905, 2146, 2317
MaeI	CTAG	6 cut(s)	110, 432, 507, 927, 1964, 2921
MaeII	ACGT	5 cut(s)	796, 1199, 1216, 1433, 1565
MaeIII	GTNAC	5 cut(s)	304, 473, 1046, 2050, 2737
MfeI	CAATTG	4 cut(s)	1934, 2475, 2762, 3017
MflI	RGATCY	7 cut(s)	132, 385, 463, 1052, 1261, 2263, 2847
MlyI	GAGTC	6 cut(s)	301, 732, 1194, 2629, 2833, 3079
MmeI	TCCRAC	2 cut(s)	2203, 2464
Mph1103I	ATGCAT	1 cut(s)	1322
MroXI	GAANNNNTTC	2 cut(s)	2354, 2544
MseI	TTAA	8 cut(s)	569, 627, 999, 1124, 1293, 2232, 2271, 2948
MslI	CAYNNNNRTG	7 cut(s)	76, 927, 1335, 1545, 1913, 1944, 2712
MspI	CCGG	2 cut(s)	251, 374
MspR9I	CCNGG	1 cut(s)	1112
MunI	CAATTG	4 cut(s)	1934, 2475, 2762, 3017
Mva1269I	GAATGC	2 cut(s)	2450, 2607
MvaI	CCWGG	1 cut(s)	1112
MvnI	CGCG	3 cut(s)	97, 143, 461
NcoI	CCATGG	3 cut(s)	378, 1908, 2217
NdeI	CATATG	3 cut(s)	2259, 2866, 2965
NmeAIII	GCCGAG	2 cut(s)	78, 2710
NmuCI	GTSAC	2 cut(s)	304, 2050
NruI	TCGCGA	1 cut(s)	143
NsiI	ATGCAT	1 cut(s)	1322
NspI	RCATGY	3 cut(s)	1538, 1943, 2530
OliI	CACNNNNGTG	1 cut(s)	927
PaeI	GCATGC	1 cut(s)	1943
PaeR7I	CTCGAG	1 cut(s)	176
PagI	TCATGA	2 cut(s)	1750, 2442
PciI	ACATGT	2 cut(s)	1534, 2526
PciSI	GCTCTTC	2 cut(s)	1576, 2550
PctI	GAATGC	2 cut(s)	2450, 2607
PdmI	GAANNNNTTC	2 cut(s)	2354, 2544
PfeI	GAWTC	7 cut(s)	67, 347, 938, 953, 1376, 1747, 2990
PflFI	GACNNNGTC	1 cut(s)	310
PflMI	CCANNNNNTGG	2 cut(s)	46, 2587
PleI	GAGTC	6 cut(s)	301, 732, 1193, 2628, 2833, 3079
PpsI	GAGTC	6 cut(s)	301, 732, 1193, 2628, 2833, 3079
PscI	ACATGT	2 cut(s)	1534, 2526
Psp124BI	GAGCTC	2 cut(s)	243, 2491
Psp1406I	AACGTT	1 cut(s)	1433
Psp6I	CCWGG	1 cut(s)	1110
PspGI	CCWGG	1 cut(s)	1110
PspPI	GGNCC	6 cut(s)	50, 339, 696, 805, 1306, 2285
PstNI	CAGNNNCTG	1 cut(s)	983
PsuI	RGATCY	7 cut(s)	132, 385, 463, 1052, 1261, 2263, 2847
PsyI	GACNNNGTC	1 cut(s)	310
RruI	TCGCGA	1 cut(s)	143
RseI	CAYNNNNRTG	7 cut(s)	76, 927, 1335, 1545, 1913, 1944, 2712
SacI	GAGCTC	2 cut(s)	243, 2491
SalI	GTCGAC	1 cut(s)	1070
SapI	GCTCTTC	2 cut(s)	1576, 2550
SaqAI	TTAA	8 cut(s)	569, 627, 999, 1124, 1293, 2232, 2271, 2948
Sau96I	GGNCC	6 cut(s)	50, 339, 696, 805, 1306, 2285
SchI	GAGTC	6 cut(s)	301, 732, 1194, 2629, 2833, 3079
ScrFI	CCNGG	1 cut(s)	1112
SfaNI	GCATC	7 cut(s)	652, 754, 1109, 1672, 1905, 2146, 2317
SfcI	CTRYAG	2 cut(s)	2742, 3149
Sfr274I	CTCGAG	1 cut(s)	176
SinI	GGWCC	3 cut(s)	339, 696, 805
SlaI	CTCGAG	1 cut(s)	176
SmiMI	CAYNNNNRTG	7 cut(s)	76, 927, 1335, 1545, 1913, 1944, 2712
SmlI	CTYRAG	5 cut(s)	176, 1923, 2119, 2291, 2638
SmoI	CTYRAG	5 cut(s)	176, 1923, 2119, 2291, 2638
SpeI	ACTAGT	1 cut(s)	926
SphI	GCATGC	1 cut(s)	1943
SsiI	CCGC	7 cut(s)	95, 359, 452, 461, 491, 500, 503
SspI	AATATT	1 cut(s)	2955
SspMI	CTAG	6 cut(s)	110, 432, 507, 927, 1964, 2921
SstI	GAGCTC	2 cut(s)	243, 2491
StyD4I	CCNGG	1 cut(s)	1110
StyI	CCWWGG	4 cut(s)	378, 1908, 1992, 2217
TaaI	ACNGT	8 cut(s)	170, 473, 1249, 1405, 1689, 1957, 1970, 3097
TaiI	ACGT	5 cut(s)	799, 1202, 1219, 1436, 1568
TaqI	TCGA	5 cut(s)	177, 232, 345, 1071, 2457
TaqII	GACCGA	1 cut(s)	417
TatI	WGTACW	3 cut(s)	812, 1506, 2521
TauI	GCSGC	2 cut(s)	454, 505
TfiI	GAWTC	7 cut(s)	67, 347, 938, 953, 1376, 1747, 2990
Tru1I	TTAA	8 cut(s)	569, 627, 999, 1124, 1293, 2232, 2271, 2948
Tru9I	TTAA	8 cut(s)	569, 627, 999, 1124, 1293, 2232, 2271, 2948
TscAI	CASTG	4 cut(s)	67, 841, 1252, 2902
TseFI	GTSAC	2 cut(s)	304, 2050
TseI	GCWGC	8 cut(s)	328, 403, 454, 481, 827, 983, 2033, 2959
Tsp45I	GTSAC	2 cut(s)	304, 2050
TspGWI	ACGGA	2 cut(s)	271, 411
TspRI	CASTG	4 cut(s)	67, 841, 1252, 2902
Tth111I	GACNNNGTC	1 cut(s)	310
Van91I	CCANNNNNTGG	2 cut(s)	46, 2587
VneI	GTGCAC	2 cut(s)	1715, 2715
VpaK11BI	GGWCC	3 cut(s)	339, 696, 805
XbaI	TCTAGA	2 cut(s)	431, 1963
XceI	RCATGY	3 cut(s)	1538, 1943, 2530
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1215, 2850
XhoI	CTCGAG	1 cut(s)	176
XmiI	GTMKAC	2 cut(s)	1071, 2825
XmnI	GAANNNNTTC	2 cut(s)	2354, 2544
XspI	CTAG	6 cut(s)	110, 432, 507, 927, 1964, 2921
Zsp2I	ATGCAT	1 cut(s)	1322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.