Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001354.1

Orthogroup ID

OG0001757

Physical Location & Seq

Genomic Coordinates Forward (+)

125125 .. 129125

Gene Structure 4001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001354.1_g000032.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

atgaggcgaaggcaatggtctgatcttcctcctgaacttatcacagacatagcagaacgtctaggcctactcgaggttgtgaggttccgcagcatatgccaggcttggaactctgcttcttctacaatttcagcaaaaattgaatctttactaaactataaaccttggtttctacattatgggtatgattctgcccaatgtcagttggtaactactgagagtggtagcattaccatgaatcttccgcaactggatcaaactacaacttgcattgcatcgtatgaaggatggcttcttgtatttaaacaaggcggatcaatgttcttctttcgtcccttctcaaaaacaaagatagaccttcccaatttcccagtctcagaactcactgaccatgttgcagcattttcatcttctcccacatctcctgactgcacagtttgtgtcatcaaccgcagtactagcaatgacaatgagttggagcttaatctactttgtcgtggaggaggcaatggatggatccaacacaagcttgactgtccgcgattctccattgatacaatcaaatgtgctgcttatagcaaactaggagaattctcctttttggaccatggtgataacaaactcaagttatcagttacacacaacagagaaatttgctggaagaataataaagtagttgaggcgaaagatgacttaccaggaaatttttattatcagatggaatatttcaagaaaactgacatgatgaacaagctggggttagcagatcttcatgaggatgtttcgttttctgtttgcggaacacagacagagtataatggtaccgactattttatatataatgagatttatagtatcagtaatcatcatgaagagtccaatagcccgcggaaattcaaaggggcgtcgattcgctccccgatctccaactctggcgaggttcgacctctcgcccaggttccgctgcaactcgcagactccatgcaactcgccggtgagcttgaccgcgtccaaccgcctcgccggtgcgggtctacttttgcccagattctgctgcagctcgcccaagctcgatcgacgctgacaacgatgaccacaggacgtcttcgatggcctcctggatgcctcgctgtctctttggagtcgccgatggcctcctggacgcctcgtcgtctctttggcgccgccggtgctcaacccaagctgtggcagaggtcttcggtttctaacattaacattggcgccgtctgtcacaaaggtttcgtcacgtaccatgaacttcggtcaacgccgatcaaggctggtcaacgctacaccactccaaaaaaaaaaatattggctgcctatttactctggacaaccataagtataccgttgggcacccataagtctcttgttggcatcaatcgatcaaacttcgtcatcgaccactgctccgccaagcgtgaaataatcacaacaagagcaccgccaatcgatcagcttgctgctcaagcgtcggtcatccatcactggcccctcaccgctggccatcctccgctggccaccctccgctggatatcctctgctagccatccatcgctagccatgctccattggccaccctccgctggatatcctccgctacccatccatagctggatatcctccgctatccatccatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box

Protein Analysis

554

Amino Acids

61.91

Weight (kDa)

8.88

Isoelectric Point (pI)

47.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001757)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g24380 FvH4_2g24390 FvH4_2g24391 FvH4_2g24410 FvH4_2g24671 FvH4_2g24690 FvH4_2g24690 FvH4_2g24690 FvH4_2g24700
malus_domestica	MD11G1297700.v1.1
prunus_persica	Prupe.4G274600_v2.0.a1 Prupe.8G252000_v2.0.a1
pyrus_communis	pycom06g03770
rosa_chinensis	RchiOBHm_Chr6g0292521 RchiOBHm_Chr6g0292531
rosa_laevigata	RLG00000012013 RLG00000012014 RLG00000012015 RLG00000012016 RLG00000012017 RLG00000012049
rosa_multiflora	Rmu_sc0001354.1_g000031 Rmu_sc0001354.1_g000032 Rmu_sc0003908.1_g000003
rosa_roxburghii	Rroxscaffold_7G00174980 Rroxscaffold_7G00175290
rosa_rugosa	Rorug06G0224900 Rorug06G0227400 Rorug06G0227500
rosa_samantha	Rh4AG099200 Rh4CG108900 Rh4CG412100 Rh4DG094200 Rh6AG338000 Rh6AG340600 Rh6AG340700 Rh6BG345300 Rh6BG348000 Rh6BG348100 Rh6BG348200 Rh6CG352300 Rh6CG354900 Rh6CG355000 Rh6DG338300 Rh6DG340700 Rh6DG340800
rosa_wichuraiana	Rw6G029670 Rw6G029680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1105
Acc65I	GGTACC	1 cut(s)	821
AccB1I	GGYRCC	4 cut(s)	821, 1181, 1241, 1379
AccB7I	CCANNNNNTGG	1 cut(s)	1206
AccI	GTMKAC	2 cut(s)	1034, 1369
AccII	CGCG	3 cut(s)	541, 889, 1008
AclWI	GGATC	4 cut(s)	261, 322, 511, 524
AcoI	YGGCCR	3 cut(s)	1528, 1542, 1598
AcsI	RAATTY	4 cut(s)	590, 651, 703, 893
AcyI	GRCGYC	5 cut(s)	905, 1102, 1163, 1182, 1242
AfaI	GTAC	3 cut(s)	457, 823, 1271
AfiI	CCNNNNNNNGG	4 cut(s)	73, 1206, 1554, 1610
AgsI	TTSAA	3 cut(s)	143, 730, 898
AhdI	GACNNNNNGTC	1 cut(s)	1167
AjnI	CCWGG	5 cut(s)	99, 697, 954, 1117, 1157
AluBI	AGCT	9 cut(s)	481, 529, 754, 1000, 1060, 1070, 1204, 1483, 1638
AluI	AGCT	9 cut(s)	481, 529, 754, 1000, 1060, 1070, 1204, 1483, 1638
Alw21I	GWGCWC	2 cut(s)	1195, 1468
Alw26I	GTCTC	4 cut(s)	379, 1138, 1178, 1395
AlwI	GGATC	4 cut(s)	261, 322, 511, 524
AlwNI	CAGNNNCTG	1 cut(s)	1051
Ama87I	CYCGRG	1 cut(s)	71
AoxI	GGCC	7 cut(s)	64, 1112, 1152, 1514, 1528, 1542, 1598
ApeKI	GCWGC	8 cut(s)	90, 398, 569, 964, 1054, 1057, 1340, 1487
ApoI	RAATTY	4 cut(s)	590, 651, 703, 893
ArsI	GACNNNNNNTTYG	2 cut(s)	1248, 1280
Asp718I	GGTACC	1 cut(s)	821
AspLEI	GCGC	2 cut(s)	1184, 1244
AspS9I	GGNCC	2 cut(s)	604, 1515
AsuHPI	GGTGA	3 cut(s)	623, 1007, 1513
AsuNHI	GCTAGC	2 cut(s)	1568, 1582
AvaI	CYCGRG	1 cut(s)	71
AvaII	GGWCC	1 cut(s)	604
BaeGI	GKGCMC	1 cut(s)	1382
BalI	TGGCCA	3 cut(s)	1530, 1544, 1600
BamHI	GGATCC	1 cut(s)	516
BanI	GGYRCC	4 cut(s)	821, 1181, 1241, 1379
BbsI	GAAGAC	2 cut(s)	1097, 1209
Bbv12I	GWGCWC	2 cut(s)	1195, 1468
BbvI	GCAGC	8 cut(s)	102, 410, 556, 951, 1041, 1069, 1327, 1474
BceAI	ACGGC	1 cut(s)	1229
BcgI	CGANNNNNNTGC	2 cut(s)	1466, 1500
BciT130I	CCWGG	5 cut(s)	101, 699, 956, 1119, 1159
BcoDI	GTCTC	4 cut(s)	379, 1138, 1178, 1395
BfaI	CTAG	5 cut(s)	62, 459, 584, 1569, 1583
BfmI	CTRYAG	1 cut(s)	1055
BfoI	RGCGCY	2 cut(s)	1185, 1245
BglII	AGATCT	1 cut(s)	766
BisI	GCNGC	9 cut(s)	91, 399, 570, 965, 1055, 1058, 1185, 1341, 1488
BlsI	GCNGC	9 cut(s)	92, 400, 571, 966, 1056, 1059, 1186, 1342, 1489
BmcAI	AGTACT	1 cut(s)	457
Bme1390I	CCNGG	5 cut(s)	101, 699, 956, 1119, 1159
Bme18I	GGWCC	1 cut(s)	604
BmeRI	GACNNNNNGTC	1 cut(s)	1167
BmeT110I	CYCGRG	1 cut(s)	71
BmgT120I	GGNCC	2 cut(s)	604, 1515
BmiI	GGNNCC	8 cut(s)	86, 518, 823, 960, 1183, 1243, 1381, 1517
BmrFI	CCNGG	5 cut(s)	101, 699, 956, 1119, 1159
BmrI	ACTGGG	1 cut(s)	365
BmsI	GCATC	3 cut(s)	284, 1112, 1410
BmtI	GCTAGC	2 cut(s)	1572, 1586
BmuI	ACTGGG	1 cut(s)	365
BpiI	GAAGAC	2 cut(s)	1097, 1209
BpuEI	CTTGAG	2 cut(s)	608, 1476
Bsa29I	ATCGAT	2 cut(s)	1408, 1476
BsaAI	YACGTR	1 cut(s)	1269
BsaHI	GRCGYC	5 cut(s)	905, 1102, 1163, 1182, 1242
BsaJI	CCNNGG	4 cut(s)	164, 607, 887, 954
BsaXI	ACNNNNNCTCC	2 cut(s)	1418, 1448
Bsc4I	CCNNNNNNNGG	4 cut(s)	73, 1206, 1554, 1610
Bse118I	RCCGGY	3 cut(s)	992, 1023, 1187
Bse1I	ACTGG	3 cut(s)	255, 371, 1517
Bse3DI	GCAATG	4 cut(s)	20, 270, 469, 514
BseBI	CCWGG	5 cut(s)	101, 699, 956, 1119, 1159
BseCI	ATCGAT	2 cut(s)	1408, 1476
BseDI	CCNNGG	4 cut(s)	164, 607, 887, 954
BseGI	GGATG	9 cut(s)	293, 518, 784, 1127, 1503, 1531, 1573, 1629, 1657
BseLI	CCNNNNNNNGG	4 cut(s)	73, 1206, 1554, 1610
BseMI	GCAATG	4 cut(s)	20, 270, 469, 514
BseMII	CTCAG	2 cut(s)	207, 390
BseNI	ACTGG	3 cut(s)	255, 371, 1517
BseRI	GAGGAG	1 cut(s)	516
BseSI	GKGCMC	1 cut(s)	1382
BseXI	GCAGC	8 cut(s)	102, 410, 556, 951, 1041, 1069, 1327, 1474
BseYI	CCCAGC	1 cut(s)	754
BsgI	GTGCAG	1 cut(s)	415
Bsh1236I	CGCG	3 cut(s)	541, 889, 1008
Bsh1285I	CGRYCG	1 cut(s)	1076
BshFI	GGCC	7 cut(s)	66, 1114, 1154, 1516, 1530, 1544, 1600
BshNI	GGYRCC	4 cut(s)	821, 1181, 1241, 1379
BshVI	ATCGAT	2 cut(s)	1408, 1476
BsiEI	CGRYCG	1 cut(s)	1076
BsiHKAI	GWGCWC	2 cut(s)	1195, 1468
BsiHKCI	CYCGRG	1 cut(s)	71
BsiSI	CCGG	3 cut(s)	993, 1024, 1188
BslFI	GGGAC	1 cut(s)	318
BslI	CCNNNNNNNGG	4 cut(s)	73, 1206, 1554, 1610
BsmAI	GTCTC	4 cut(s)	379, 1138, 1178, 1395
BsmBI	CGTCTC	1 cut(s)	1178
BsmFI	GGGAC	1 cut(s)	318
BsnI	GGCC	7 cut(s)	66, 1114, 1154, 1516, 1530, 1544, 1600
BsoBI	CYCGRG	1 cut(s)	71
Bsp1286I	GDGCHC	3 cut(s)	1195, 1382, 1468
Bsp19I	CCATGG	1 cut(s)	607
BspANI	GGCC	7 cut(s)	66, 1114, 1154, 1516, 1530, 1544, 1600
BspCNI	CTCAG	2 cut(s)	208, 389
BspDI	ATCGAT	2 cut(s)	1408, 1476
BspFNI	CGCG	3 cut(s)	541, 889, 1008
BspHI	TCATGA	2 cut(s)	772, 868
BspLI	GGNNCC	8 cut(s)	86, 518, 823, 960, 1183, 1243, 1381, 1517
BspMAI	CTGCAG	1 cut(s)	1059
BspOI	GCTAGC	2 cut(s)	1572, 1586
BspPI	GGATC	4 cut(s)	261, 322, 511, 524
BspT107I	GGYRCC	4 cut(s)	821, 1181, 1241, 1379
BsrDI	GCAATG	4 cut(s)	20, 270, 469, 514
BsrFI	RCCGGY	3 cut(s)	992, 1023, 1187
BsrI	ACTGG	3 cut(s)	255, 371, 1517
BssAI	RCCGGY	3 cut(s)	992, 1023, 1187
BssECI	CCNNGG	4 cut(s)	164, 607, 887, 954
BssNAI	GTATAC	1 cut(s)	1370
BssNI	GRCGYC	5 cut(s)	905, 1102, 1163, 1182, 1242
BssT1I	CCWWGG	2 cut(s)	164, 607
Bst1107I	GTATAC	1 cut(s)	1370
Bst2UI	CCWGG	5 cut(s)	101, 699, 956, 1119, 1159
Bst4CI	ACNGT	3 cut(s)	436, 536, 1374
Bst6I	CTCTTC	1 cut(s)	867
BstACI	GRCGYC	5 cut(s)	905, 1102, 1163, 1182, 1242
BstAPI	GCANNNNNTGC	1 cut(s)	96
BstBAI	YACGTR	1 cut(s)	1269
BstC8I	GCNNGC	7 cut(s)	887, 1062, 1485, 1528, 1542, 1570, 1584
BstDEI	CTNAG	2 cut(s)	216, 376
BstDSI	CCRYGG	2 cut(s)	607, 887
BstENI	CCTNNNNNAGG	1 cut(s)	71
BstF5I	GGATG	9 cut(s)	293, 518, 784, 1127, 1503, 1531, 1573, 1629, 1657
BstFNI	CGCG	3 cut(s)	541, 889, 1008
BstH2I	RGCGCY	2 cut(s)	1185, 1245
BstHHI	GCGC	2 cut(s)	1184, 1244
BstMAI	GTCTC	4 cut(s)	379, 1138, 1178, 1395
BstMCI	CGRYCG	1 cut(s)	1076
BstMWI	GCNNNNNNNGC	6 cut(s)	96, 459, 1190, 1493, 1588, 1597
BstNI	CCWGG	5 cut(s)	101, 699, 956, 1119, 1159
BstSCI	CCNGG	5 cut(s)	99, 697, 954, 1117, 1157
BstSFI	CTRYAG	1 cut(s)	1055
BstSLI	GKGCMC	1 cut(s)	1382
BstUI	CGCG	3 cut(s)	541, 889, 1008
BstV1I	GCAGC	8 cut(s)	102, 410, 556, 951, 1041, 1069, 1327, 1474
BstV2I	GAAGAC	2 cut(s)	1097, 1209
BstX2I	RGATCY	2 cut(s)	516, 766
BstYI	RGATCY	2 cut(s)	516, 766
BstZ17I	GTATAC	1 cut(s)	1370
Bsu15I	ATCGAT	2 cut(s)	1408, 1476
BsuRI	GGCC	7 cut(s)	66, 1114, 1154, 1516, 1530, 1544, 1600
BsuTUI	ATCGAT	2 cut(s)	1408, 1476
BtgI	CCRYGG	2 cut(s)	607, 887
BtgZI	GCGATG	1 cut(s)	1563
BtsCI	GGATG	9 cut(s)	293, 518, 784, 1127, 1503, 1531, 1573, 1629, 1657
BtsI	GCAGTG	1 cut(s)	1429
BtsIMutI	CAGTG	3 cut(s)	384, 1429, 1510
Cac8I	GCNNGC	7 cut(s)	887, 1062, 1485, 1528, 1542, 1570, 1584
CaiI	CAGNNNCTG	1 cut(s)	1051
CciI	TCATGA	2 cut(s)	772, 868
CfoI	GCGC	2 cut(s)	1184, 1244
Cfr10I	RCCGGY	3 cut(s)	992, 1023, 1187
Cfr13I	GGNCC	2 cut(s)	604, 1515
Cfr42I	CCGCGG	1 cut(s)	890
ClaI	ATCGAT	2 cut(s)	1408, 1476
CseI	GACGC	5 cut(s)	894, 997, 1087, 1171, 1485
Csp6I	GTAC	3 cut(s)	456, 822, 1270
CviAII	CATG	9 cut(s)	235, 392, 608, 742, 773, 869, 982, 1274, 1588
CviQI	GTAC	3 cut(s)	456, 822, 1270
DdeI	CTNAG	2 cut(s)	216, 376
DinI	GGCGCC	2 cut(s)	1183, 1243
DraI	TTTAAA	1 cut(s)	304
DriI	GACNNNNNGTC	1 cut(s)	1167
EaeI	YGGCCR	3 cut(s)	1528, 1542, 1598
Eam1104I	CTCTTC	1 cut(s)	867
Eam1105I	GACNNNNNGTC	1 cut(s)	1167
EarI	CTCTTC	1 cut(s)	867
EciI	GGCGGA	2 cut(s)	327, 1426
Eco130I	CCWWGG	2 cut(s)	164, 607
Eco147I	AGGCCT	1 cut(s)	66
Eco32I	GATATC	3 cut(s)	1560, 1616, 1644
Eco47I	GGWCC	1 cut(s)	604
Eco88I	CYCGRG	1 cut(s)	71
EcoNI	CCTNNNNNAGG	1 cut(s)	71
EcoRI	GAATTC	1 cut(s)	590
EcoRII	CCWGG	5 cut(s)	99, 697, 954, 1117, 1157
EcoRV	GATATC	3 cut(s)	1560, 1616, 1644
EcoT14I	CCWWGG	2 cut(s)	164, 607
EgeI	GGCGCC	2 cut(s)	1183, 1243
EheI	GGCGCC	2 cut(s)	1183, 1243
ErhI	CCWWGG	2 cut(s)	164, 607
Esp3I	CGTCTC	1 cut(s)	1178
FaeI	CATG	9 cut(s)	238, 395, 611, 745, 776, 872, 985, 1277, 1591
FalI	AAGNNNNNCTT	2 cut(s)	276, 308
FaqI	GGGAC	1 cut(s)	318
FatI	CATG	9 cut(s)	234, 391, 607, 741, 772, 868, 981, 1273, 1587
FauI	CCCGC	2 cut(s)	894, 1022
FauNDI	CATATG	1 cut(s)	95
FblI	GTMKAC	2 cut(s)	1034, 1369
Fnu4HI	GCNGC	9 cut(s)	91, 399, 570, 965, 1055, 1058, 1185, 1341, 1488
FokI	GGATG	9 cut(s)	300, 525, 791, 1134, 1490, 1518, 1560, 1616, 1644
Fsp4HI	GCNGC	9 cut(s)	91, 399, 570, 965, 1055, 1058, 1185, 1341, 1488
FspBI	CTAG	5 cut(s)	62, 459, 584, 1569, 1583
GlaI	GCGC	2 cut(s)	1183, 1243
GluI	GCNGC	9 cut(s)	91, 399, 570, 965, 1055, 1058, 1185, 1341, 1488
GsaI	CCCAGC	1 cut(s)	758
HaeII	RGCGCY	2 cut(s)	1185, 1245
HaeIII	GGCC	7 cut(s)	66, 1114, 1154, 1516, 1530, 1544, 1600
HapII	CCGG	3 cut(s)	993, 1024, 1188
HgaI	GACGC	5 cut(s)	894, 997, 1087, 1171, 1485
HhaI	GCGC	2 cut(s)	1184, 1244
Hin1I	GRCGYC	5 cut(s)	905, 1102, 1163, 1182, 1242
Hin1II	CATG	9 cut(s)	238, 395, 611, 745, 776, 872, 985, 1277, 1591
Hin6I	GCGC	2 cut(s)	1182, 1242
HinP1I	GCGC	2 cut(s)	1182, 1242
HincII	GTYRAC	2 cut(s)	1287, 1307
HindII	GTYRAC	2 cut(s)	1287, 1307
HindIII	AAGCTT	1 cut(s)	527
HinfI	GANTC	9 cut(s)	143, 188, 238, 543, 875, 910, 977, 1048, 1142
HpaII	CCGG	3 cut(s)	993, 1024, 1188
HphI	GGTGA	3 cut(s)	623, 1007, 1513
Hpy166II	GTNNAC	4 cut(s)	1035, 1287, 1307, 1370
Hpy188I	TCNGA	3 cut(s)	22, 379, 717
Hpy188III	TCNNGA	6 cut(s)	32, 425, 730, 773, 869, 1354
Hpy8I	GTNNAC	4 cut(s)	1035, 1287, 1307, 1370
Hpy99I	CGWCG	4 cut(s)	910, 1081, 1173, 1501
HpyAV	CCTTC	4 cut(s)	3, 278, 346, 368
HpyCH4III	ACNGT	3 cut(s)	436, 536, 1374
HpyCH4IV	ACGT	3 cut(s)	58, 1102, 1268
HpyCH4V	TGCA	7 cut(s)	270, 275, 398, 432, 967, 985, 1057
HpyF10VI	GCNNNNNNNGC	6 cut(s)	96, 459, 1190, 1493, 1588, 1597
HpyF3I	CTNAG	2 cut(s)	216, 376
HpySE526I	ACGT	3 cut(s)	58, 1102, 1268
Hsp92I	GRCGYC	5 cut(s)	905, 1102, 1163, 1182, 1242
Hsp92II	CATG	9 cut(s)	238, 395, 611, 745, 776, 872, 985, 1277, 1591
HspAI	GCGC	2 cut(s)	1182, 1242
KasI	GGCGCC	2 cut(s)	1181, 1241
KpnI	GGTACC	1 cut(s)	825
KspI	CCGCGG	1 cut(s)	890
LmnI	GCTCC	4 cut(s)	478, 920, 1439, 1596
Lsp1109I	GCAGC	8 cut(s)	102, 410, 556, 951, 1041, 1069, 1327, 1474
LweI	GCATC	3 cut(s)	284, 1112, 1410
MaeI	CTAG	5 cut(s)	62, 459, 584, 1569, 1583
MaeII	ACGT	3 cut(s)	58, 1102, 1268
MaeIII	GTNAC	4 cut(s)	208, 634, 1250, 1264
MflI	RGATCY	2 cut(s)	516, 766
MhlI	GDGCHC	3 cut(s)	1195, 1382, 1468
MlsI	TGGCCA	3 cut(s)	1530, 1544, 1600
MluCI	AATT	7 cut(s)	126, 138, 364, 590, 651, 703, 893
MluNI	TGGCCA	3 cut(s)	1530, 1544, 1600
Mly113I	GGCGCC	2 cut(s)	1182, 1242
MlyI	GAGTC	3 cut(s)	884, 971, 1151
MmeI	TCCRAC	4 cut(s)	456, 544, 951, 1036
Mox20I	TGGCCA	3 cut(s)	1530, 1544, 1600
MscI	TGGCCA	3 cut(s)	1530, 1544, 1600
MseI	TTAA	3 cut(s)	303, 483, 1233
MslI	CAYNNNNRTG	2 cut(s)	233, 777
Msp20I	TGGCCA	3 cut(s)	1530, 1544, 1600
MspA1I	CMGCKG	6 cut(s)	889, 964, 1526, 1540, 1554, 1610
MspI	CCGG	3 cut(s)	993, 1024, 1188
MspR9I	CCNGG	5 cut(s)	101, 699, 956, 1119, 1159
MvaI	CCWGG	5 cut(s)	101, 699, 956, 1119, 1159
MvnI	CGCG	3 cut(s)	541, 889, 1008
MwoI	GCNNNNNNNGC	6 cut(s)	96, 459, 1190, 1493, 1588, 1597
NarI	GGCGCC	2 cut(s)	1182, 1242
NcoI	CCATGG	1 cut(s)	607
NdeI	CATATG	1 cut(s)	95
NheI	GCTAGC	2 cut(s)	1568, 1582
NlaIII	CATG	9 cut(s)	238, 395, 611, 745, 776, 872, 985, 1277, 1591
NlaIV	GGNNCC	8 cut(s)	86, 518, 823, 960, 1183, 1243, 1381, 1517
NmuCI	GTSAC	2 cut(s)	1250, 1264
PaeR7I	CTCGAG	1 cut(s)	71
PagI	TCATGA	2 cut(s)	772, 868
PceI	AGGCCT	1 cut(s)	66
PcsI	WCGNNNNNNNCGW	1 cut(s)	1085
PfeI	GAWTC	6 cut(s)	143, 188, 238, 543, 910, 1048
PflFI	GACNNNGTC	1 cut(s)	1007
PflMI	CCANNNNNTGG	1 cut(s)	1206
PfoI	TCCNGGA	2 cut(s)	1117, 1157
PkrI	GCNGC	9 cut(s)	92, 400, 571, 966, 1056, 1059, 1186, 1342, 1489
Ple19I	CGATCG	1 cut(s)	1076
PleI	GAGTC	3 cut(s)	883, 971, 1150
PluTI	GGCGCC	2 cut(s)	1185, 1245
PpsI	GAGTC	3 cut(s)	883, 971, 1150
Ppu21I	YACGTR	1 cut(s)	1269
Psp6I	CCWGG	5 cut(s)	99, 697, 954, 1117, 1157
PspFI	CCCAGC	1 cut(s)	754
PspGI	CCWGG	5 cut(s)	99, 697, 954, 1117, 1157
PspN4I	GGNNCC	8 cut(s)	86, 518, 823, 960, 1183, 1243, 1381, 1517
PspPI	GGNCC	2 cut(s)	604, 1515
PspXI	VCTCGAGB	1 cut(s)	71
PstI	CTGCAG	1 cut(s)	1059
PstNI	CAGNNNCTG	1 cut(s)	1051
PsuI	RGATCY	2 cut(s)	516, 766
PsyI	GACNNNGTC	1 cut(s)	1007
PvuI	CGATCG	1 cut(s)	1076
RsaI	GTAC	3 cut(s)	457, 823, 1271
RsaNI	GTAC	3 cut(s)	456, 822, 1270
RseI	CAYNNNNRTG	2 cut(s)	233, 777
SacII	CCGCGG	1 cut(s)	890
SaqAI	TTAA	3 cut(s)	303, 483, 1233
SatI	GCNGC	9 cut(s)	91, 399, 570, 965, 1055, 1058, 1185, 1341, 1488
Sau96I	GGNCC	2 cut(s)	604, 1515
ScaI	AGTACT	1 cut(s)	457
SchI	GAGTC	3 cut(s)	884, 971, 1151
ScrFI	CCNGG	5 cut(s)	101, 699, 956, 1119, 1159
SduI	GDGCHC	3 cut(s)	1195, 1382, 1468
SfaNI	GCATC	3 cut(s)	284, 1112, 1410
SfcI	CTRYAG	1 cut(s)	1055
SfoI	GGCGCC	2 cut(s)	1183, 1243
Sfr274I	CTCGAG	1 cut(s)	71
Sfr303I	CCGCGG	1 cut(s)	890
SgrAI	CRCCGGYG	3 cut(s)	992, 1023, 1187
SgrBI	CCGCGG	1 cut(s)	890
SinI	GGWCC	1 cut(s)	604
SlaI	CTCGAG	1 cut(s)	71
SmiMI	CAYNNNNRTG	2 cut(s)	233, 777
SmlI	CTYRAG	3 cut(s)	71, 623, 1491
SmoI	CTYRAG	3 cut(s)	71, 623, 1491
Sse9I	AATT	7 cut(s)	126, 138, 364, 590, 651, 703, 893
SseBI	AGGCCT	1 cut(s)	66
SspDI	GGCGCC	2 cut(s)	1181, 1241
SspI	AATATT	2 cut(s)	725, 1335
SspMI	CTAG	5 cut(s)	62, 459, 584, 1569, 1583
StuI	AGGCCT	1 cut(s)	66
StyD4I	CCNGG	5 cut(s)	99, 697, 954, 1117, 1157
StyI	CCWWGG	2 cut(s)	164, 607
TaaI	ACNGT	3 cut(s)	436, 536, 1374
TaiI	ACGT	3 cut(s)	61, 1105, 1271
TaqI	TCGA	9 cut(s)	72, 908, 943, 1072, 1076, 1108, 1408, 1425, 1476
TaqII	GACCGA	2 cut(s)	1272, 1489
TasI	AATT	7 cut(s)	126, 138, 364, 590, 651, 703, 893
TatI	WGTACW	1 cut(s)	455
TauI	GCSGC	1 cut(s)	1187
TfiI	GAWTC	6 cut(s)	143, 188, 238, 543, 910, 1048
Tru1I	TTAA	3 cut(s)	303, 483, 1233
Tru9I	TTAA	3 cut(s)	303, 483, 1233
TscAI	CASTG	3 cut(s)	391, 1436, 1517
TseFI	GTSAC	2 cut(s)	1250, 1264
TseI	GCWGC	8 cut(s)	90, 398, 569, 964, 1054, 1057, 1340, 1487
Tsp45I	GTSAC	2 cut(s)	1250, 1264
TspDTI	ATGAA	7 cut(s)	251, 297, 396, 761, 761, 885, 1290
TspRI	CASTG	3 cut(s)	391, 1436, 1517
Tth111I	GACNNNGTC	1 cut(s)	1007
Van91I	CCANNNNNTGG	1 cut(s)	1206
VpaK11BI	GGWCC	1 cut(s)	604
XagI	CCTNNNNNAGG	1 cut(s)	71
XapI	RAATTY	4 cut(s)	590, 651, 703, 893
XhoI	CTCGAG	1 cut(s)	71
XmiI	GTMKAC	2 cut(s)	1034, 1369
XspI	CTAG	5 cut(s)	62, 459, 584, 1569, 1583
ZraI	GACGTC	1 cut(s)	1103
ZrmI	AGTACT	1 cut(s)	457

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.