Rmu_sc0003478.1_g000001

Glutamate-gated receptor that probably acts as non- selective cation channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003478.1
OG0001930
Physical Location & Seq
Reverse (-)
570 .. 3851
3282 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2694 bp
atggtacctacatatgagaatgcaaagactacaacaattccaggtagcttgaccatggcaaaccagaagcatttcctctggttcatcttcattgttttgttcatccctgggatcgagctttcaacgacgaaagaggtgatacaagtaccagtaggggttgttcttaacttaaattcctcagtgggagctatggcagagaactgcatgaccatggcacttgatgatttttatgctaagcatgctcattatcaaacaaggcttttctttctcaccagggattcaaagaatgatgttgtttcagcagcatttgaagcacagcacttggtaaacattgaaaatgtgagtgccattatcggacctcaaagttcagcagaagcaaagtttgtcatagagctgggaagaaggaatcatgttcccattctttcgttttctgccactagtccatctctttctccatcccatagttcatttttcgttcggacggcttttagtgactctgctcaagtagaagccatagctgccattgtcggagcttatagatggttggaagttgttctcatctatgaagacaccgagtatggaaatagcttaattccatatttggtagacgctttccagcaagttggcgctcgagtgccttatagaagtgtcattcctcctcattataatggcacaaaaattttaaaggagcttaaccacttgaaatcaactcgagcaagaatatttttggtccatatgactgcttcccttgggtccaaattctttttcttagcaagtaaggcagggatgatgactgaagggtatggatggattgttacggaagggttatcgactttattagatcctgtgggttcaagaaccatggactcaatgcaaggtgtagtgggggtaaggccatatataccaatgtcaaaagaacttaaagacttcgtgttgcgaatgaaaagattcaggttcagaaaatcaagcaagattactggtataaacctctttgggctgtgggcatatgatacagtttgggcattagcaatggcagtggagaaggttggaatagcaaattatagttccatgatacaaaatgttggcacaagcagagttgatcttgcaagtttgggaactggtgacaggggtcaaaatcttcttgaagctatcctagatttaaaatttgaaaacctcagttggaatttccggttggctaagggacagttggaagcttcaacctttgaggtatataatgtgattggcggaaaagaaagaataattggatattggaaccaaatgaatggagcagcaaagttggatgtaaggaagacactcgagaaaccaatctggccagggtacactacagacatccctccaacaaagaaattgaggattggagttcccttgaaaaaaggtttttatgaattcctaaaattcgaaaacaacaatatatcaggattctctgctgagatattctttgctgcagaaaagaaactgccattttccctttcatatgagttttctgccttcgcggggacttatgatgatcttctttatcaaattcatcttcagaaatatgatgctgtggtgggagacacaacaattgtagctgatcgctcattatatgtagattttacgttgccttattctgaatcaggagtttccatgatagttttgacagaagatagttttgtaatatggcttcttgagcaccgggaaaacaccgagttcagaggtcctccacagaaacaacttggcatgatattctggttctccttttcaaccctcgtctttgcacacagagagaaagtggtgaacaattggtcaaggtttgtgctgattatatgggtttttgtggtactgatcctaacacagagttacactgcaagcttagcctcgatgttaacagtacggaagttgcagcctgcattcactgatataaaagagatacaaagaaatggttacaaagtaggatatcaaaatagttcctttattaaagggtttctcatggaacatttaaattttgatgagacccagttggtgccattggtaaccattcaggattatcataacgcactctctagaggaaataagaatagagttgctgccattttagatgaagtcccttacctcaagttgatccttaaaaagaactgttccaagtacaccatggttggaccaacctacaaaactgatggatttggctttgctttccaatcagggtcctcgctggtatcctacatgtcaagcgcaatcttgaacgtgactcaagataaaaatcagatggataaacttcagtcgacttactttgattactttgataaccaacctgcctgtgaggatcaaagtgccaaaatttcttcagagggtccaagtcttggtgtctacagcttcggaggcctcttcatcatcgcaggtgtggtctccatggttgctcttttgatgtacatgtatcacttcctttgctctcattggccagctttgcgaacaattagttcttctgagagcagattttgggagaaattggttgaagtggcaaagcattttgacaagaaagatctcacttcacatcagtttaagcgaagagaatcaagagtacatgctttagacactcctgatgatggtctagcagctgcaccgggtgctaatgatatgcaaaagaactcagcaggtactcacataatagtggagaacaatcttggacataaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

897

Amino Acids

100.85

Weight (kDa)

8.55

Isoelectric Point (pI)

33.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 58 - 353 2.3e-22 Periplasmic binding protein
ANF_receptor PF01094 66 - 415 6.6e-75 Receptor family ligand binding region
SBP_bac_3 PF00497 468 - 765 9.4e-11 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 551 - 801 7.6e-31 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 666
AarI CACCTGC 1 cut(s) 2387
Acc36I ACCTGC 3 cut(s) 2320, 2387, 2642
Acc65I GGTACC 1 cut(s) 4
AccB1I GGYRCC 2 cut(s) 4, 2023
AccB7I CCANNNNNTGG 1 cut(s) 2360
AccI GTMKAC 3 cut(s) 606, 2282, 2367
AccII CGCG 1 cut(s) 1514
AciI CCGC 2 cut(s) 1245, 1514
AclWI GGATC 5 cut(s) 119, 836, 1840, 2116, 2331
AcoI YGGCCR 2 cut(s) 1331, 2456
AcuI CTGAAG 4 cut(s) 816, 1535, 2261, 2328
AdeI CACNNNGTG 1 cut(s) 2624
AfaI GTAC 9 cut(s) 6, 147, 1340, 1842, 1893, 2147, 2429, 2580, 2656
AfiI CCNNNNNNNGG 3 cut(s) 1515, 2360, 2603
AflIII ACRYGT 2 cut(s) 2223, 2430
AhlI ACTAGT 1 cut(s) 437
AjnI CCWGG 4 cut(s) 40, 106, 272, 1333
AjuI GAANNNNNNNTTGG 6 cut(s) 749, 781, 1175, 1207, 1245, 1277
Alw21I GWGCWC 1 cut(s) 1695
Alw26I GTCTC 3 cut(s) 1569, 2006, 2410
AlwI GGATC 5 cut(s) 119, 836, 1840, 2116, 2331
Ama87I CYCGRG 3 cut(s) 630, 711, 1316
AoxI GGCC 4 cut(s) 893, 1331, 2380, 2456
ApeKI GCWGC 8 cut(s) 302, 518, 1289, 1463, 1903, 2087, 2612, 2615
Asp700I GAANNNNTTC 3 cut(s) 71, 552, 947
Asp718I GGTACC 1 cut(s) 4
AspLEI GCGC 2 cut(s) 629, 2234
AspS9I GGNCC 7 cut(s) 356, 730, 753, 1718, 2159, 2205, 2351
AsuC2I CCSGG 2 cut(s) 1697, 2622
AsuHPI GGTGA 4 cut(s) 148, 262, 1133, 1807
AsuII TTCGAA 1 cut(s) 1419
AvaI CYCGRG 3 cut(s) 630, 711, 1316
AvaII GGWCC 7 cut(s) 356, 730, 753, 1718, 2159, 2205, 2351
BalI TGGCCA 2 cut(s) 1333, 2458
BanI GGYRCC 2 cut(s) 4, 2023
BarI GAAGNNNNNNTAC 2 cut(s) 1668, 1700
BbsI GAAGAC 2 cut(s) 573, 1316
Bbv12I GWGCWC 1 cut(s) 1695
BbvI GCAGC 8 cut(s) 314, 505, 1301, 1450, 1915, 2074, 2602, 2624
BccI CCATC 7 cut(s) 451, 463, 534, 801, 2171, 2260, 2597
BceAI ACGGC 1 cut(s) 498
BciT130I CCWGG 4 cut(s) 42, 108, 274, 1335
BciVI GTATCC 1 cut(s) 2227
BcnI CCSGG 2 cut(s) 1697, 2622
BcoDI GTCTC 3 cut(s) 1569, 2006, 2410
BcuI ACTAGT 1 cut(s) 437
BfaI CTAG 4 cut(s) 438, 1154, 2064, 2609
BfmI CTRYAG 3 cut(s) 1344, 1464, 2368
BfoI RGCGCY 1 cut(s) 630
BfuAI ACCTGC 3 cut(s) 2320, 2387, 2642
BfuI GTATCC 1 cut(s) 2227
BglII AGATCT 1 cut(s) 2539
BisI GCNGC 8 cut(s) 303, 519, 1290, 1464, 1904, 2088, 2613, 2616
BlpI GCTNAGC 2 cut(s) 234, 1873
BlsI GCNGC 8 cut(s) 304, 520, 1291, 1465, 1905, 2089, 2614, 2617
Bme1390I CCNGG 6 cut(s) 42, 108, 274, 1335, 1697, 2622
Bme18I GGWCC 7 cut(s) 356, 730, 753, 1718, 2159, 2205, 2351
BmeT110I CYCGRG 3 cut(s) 630, 711, 1316
BmgT120I GGNCC 7 cut(s) 356, 730, 753, 1718, 2159, 2205, 2351
BmiI GGNNCC 6 cut(s) 6, 754, 1274, 2025, 2206, 2352
BmrFI CCNGG 6 cut(s) 42, 108, 274, 1335, 1697, 2622
BmrI ACTGGG 1 cut(s) 2011
BmsI GCATC 1 cut(s) 1552
BmuI ACTGGG 1 cut(s) 2011
BoxI GACNNNNGTC 1 cut(s) 1128
BpiI GAAGAC 2 cut(s) 573, 1316
Bpu10I CCTNAGC 1 cut(s) 1197
Bpu1102I GCTNAGC 2 cut(s) 234, 1873
Bpu14I TTCGAA 1 cut(s) 1419
BpuEI CTTGAG 4 cut(s) 486, 1709, 2099, 2235
BpuMI CCSGG 2 cut(s) 1697, 2622
BsaBI GATNNNNATC 1 cut(s) 2259
BsaI GGTCTC 2 cut(s) 2006, 2410
BsaWI WCCGGW 1 cut(s) 1188
Bsc4I CCNNNNNNNGG 3 cut(s) 1515, 2360, 2603
Bse1I ACTGG 4 cut(s) 149, 982, 1123, 2017
Bse3DI GCAATG 1 cut(s) 1035
Bse8I GATNNNNATC 1 cut(s) 2259
BseBI CCWGG 4 cut(s) 42, 108, 274, 1335
BseGI GGATG 6 cut(s) 102, 455, 792, 812, 1306, 1350
BseJI GATNNNNATC 1 cut(s) 2259
BseLI CCNNNNNNNGG 3 cut(s) 1515, 2360, 2603
BseMI GCAATG 1 cut(s) 1035
BseMII CTCAG 5 cut(s) 192, 1189, 1440, 2475, 2661
BseNI ACTGG 4 cut(s) 149, 982, 1123, 2017
BseRI GAGGAG 1 cut(s) 648
BseXI GCAGC 8 cut(s) 314, 505, 1301, 1450, 1915, 2074, 2602, 2624
BseYI CCCAGC 1 cut(s) 394
BsgI GTGCAG 1 cut(s) 2601
Bsh1236I CGCG 1 cut(s) 1514
BshFI GGCC 4 cut(s) 895, 1333, 2382, 2458
BshNI GGYRCC 2 cut(s) 4, 2023
BsiHKAI GWGCWC 1 cut(s) 1695
BsiHKCI CYCGRG 3 cut(s) 630, 711, 1316
BsiSI CCGG 3 cut(s) 1189, 1696, 2621
BslFI GGGAC 3 cut(s) 1215, 1531, 2090
BslI CCNNNNNNNGG 3 cut(s) 1515, 2360, 2603
BsmAI GTCTC 3 cut(s) 1569, 2006, 2410
BsmFI GGGAC 3 cut(s) 1215, 1531, 2090
BsmI GAATGC 2 cut(s) 25, 1910
BsnI GGCC 4 cut(s) 895, 1333, 2382, 2458
Bso31I GGTCTC 2 cut(s) 2006, 2410
BsoBI CYCGRG 3 cut(s) 630, 711, 1316
Bsp119I TTCGAA 1 cut(s) 1419
Bsp1286I GDGCHC 1 cut(s) 1695
Bsp1407I TGTACA 1 cut(s) 2427
Bsp143I GATC 9 cut(s) 111, 841, 1099, 1528, 1594, 1845, 2121, 2323, 2539
Bsp1720I GCTNAGC 2 cut(s) 234, 1873
Bsp19I CCATGG 5 cut(s) 54, 210, 861, 2151, 2409
BspACI CCGC 2 cut(s) 1245, 1514
BspANI GGCC 4 cut(s) 895, 1333, 2382, 2458
BspCNI CTCAG 5 cut(s) 191, 1188, 1441, 2476, 2660
BspFNI CGCG 1 cut(s) 1514
BspLI GGNNCC 6 cut(s) 6, 754, 1274, 2025, 2206, 2352
BspMAI CTGCAG 1 cut(s) 1468
BspMI ACCTGC 3 cut(s) 2320, 2387, 2642
BspPI GGATC 5 cut(s) 119, 836, 1840, 2116, 2331
BspT104I TTCGAA 1 cut(s) 1419
BspT107I GGYRCC 2 cut(s) 4, 2023
BspTNI GGTCTC 2 cut(s) 2006, 2410
BsrDI GCAATG 1 cut(s) 1035
BsrGI TGTACA 1 cut(s) 2427
BsrI ACTGG 4 cut(s) 149, 982, 1123, 2017
BssMI GATC 9 cut(s) 111, 841, 1099, 1528, 1594, 1845, 2121, 2323, 2539
BssT1I CCWWGG 6 cut(s) 54, 210, 748, 861, 2151, 2409
Bst2UI CCWGG 4 cut(s) 42, 108, 274, 1335
Bst4CI ACNGT 4 cut(s) 1015, 1206, 1891, 2138
Bst6I CTCTTC 2 cut(s) 2390, 2560
BstAPI GCANNNNNTGC 1 cut(s) 2624
BstAUI TGTACA 1 cut(s) 2427
BstBI TTCGAA 1 cut(s) 1419
BstC8I GCNNGC 4 cut(s) 240, 1870, 1908, 2460
BstDEI CTNAG 9 cut(s) 178, 234, 769, 1175, 1197, 1449, 1873, 2484, 2647
BstDSI CCRYGG 5 cut(s) 54, 210, 861, 2151, 2409
BstEII GGTNACC 1 cut(s) 2032
BstF5I GGATG 6 cut(s) 102, 455, 792, 812, 1306, 1350
BstFNI CGCG 1 cut(s) 1514
BstH2I RGCGCY 1 cut(s) 630
BstHHI GCGC 2 cut(s) 629, 2234
BstKTI GATC 9 cut(s) 114, 844, 1102, 1531, 1597, 1848, 2124, 2326, 2542
BstMAI GTCTC 3 cut(s) 1569, 2006, 2410
BstMBI GATC 9 cut(s) 111, 841, 1099, 1528, 1594, 1845, 2121, 2323, 2539
BstMWI GCNNNNNNNGC 9 cut(s) 239, 311, 518, 779, 1690, 1874, 2379, 2464, 2624
BstNI CCWGG 4 cut(s) 42, 108, 274, 1335
BstNSI RCATGY 4 cut(s) 242, 2227, 2434, 2585
BstPAI GACNNNNGTC 1 cut(s) 1128
BstPI GGTNACC 1 cut(s) 2032
BstSCI CCNGG 6 cut(s) 40, 106, 272, 1333, 1695, 2620
BstSFI CTRYAG 3 cut(s) 1344, 1464, 2368
BstUI CGCG 1 cut(s) 1514
BstV1I GCAGC 8 cut(s) 314, 505, 1301, 1450, 1915, 2074, 2602, 2624
BstV2I GAAGAC 2 cut(s) 573, 1316
BstX2I RGATCY 2 cut(s) 841, 2539
BstXI CCANNNNNNTGG 2 cut(s) 623, 1283
BstYI RGATCY 2 cut(s) 841, 2539
BsuI GTATCC 1 cut(s) 2227
BsuRI GGCC 4 cut(s) 895, 1333, 2382, 2458
BtgI CCRYGG 5 cut(s) 54, 210, 861, 2151, 2409
BtgZI GCGATG 1 cut(s) 2377
BtsCI GGATG 6 cut(s) 102, 455, 792, 812, 1306, 1350
BtsI GCAGTG 2 cut(s) 1041, 1863
BtsIMutI CAGTG 4 cut(s) 186, 1041, 1863, 1914
BveI ACCTGC 3 cut(s) 2320, 2387, 2642
Cac8I GCNNGC 4 cut(s) 240, 1870, 1908, 2460
CfoI GCGC 2 cut(s) 629, 2234
Cfr13I GGNCC 7 cut(s) 356, 730, 753, 1718, 2159, 2205, 2351
CseI GACGC 1 cut(s) 617
Csp6I GTAC 9 cut(s) 5, 146, 1339, 1841, 1892, 2146, 2428, 2579, 2655
CspCI CAANNNNNGTGG 2 cut(s) 1017, 1052
CviQI GTAC 9 cut(s) 5, 146, 1339, 1841, 1892, 2146, 2428, 2579, 2655
DdeI CTNAG 9 cut(s) 178, 234, 769, 1175, 1197, 1449, 1873, 2484, 2647
DpnI GATC 9 cut(s) 113, 843, 1101, 1530, 1596, 1847, 2123, 2325, 2541
DpnII GATC 9 cut(s) 111, 841, 1099, 1528, 1594, 1845, 2121, 2323, 2539
DraI TTTAAA 3 cut(s) 684, 1161, 2001
DraIII CACNNNGTG 1 cut(s) 2624
EaeI YGGCCR 2 cut(s) 1331, 2456
Eam1104I CTCTTC 2 cut(s) 2390, 2560
EarI CTCTTC 2 cut(s) 2390, 2560
EciI GGCGGA 1 cut(s) 1260
Eco130I CCWWGG 6 cut(s) 54, 210, 748, 861, 2151, 2409
Eco147I AGGCCT 1 cut(s) 2382
Eco31I GGTCTC 2 cut(s) 2006, 2410
Eco32I GATATC 1 cut(s) 1958
Eco47I GGWCC 7 cut(s) 356, 730, 753, 1718, 2159, 2205, 2351
Eco57I CTGAAG 4 cut(s) 816, 1535, 2261, 2328
Eco88I CYCGRG 3 cut(s) 630, 711, 1316
Eco91I GGTNACC 1 cut(s) 2032
EcoO109I RGGNCCY 2 cut(s) 1718, 2205
EcoO65I GGTNACC 1 cut(s) 2032
EcoRI GAATTC 1 cut(s) 1406
EcoRII CCWGG 4 cut(s) 40, 106, 272, 1333
EcoRV GATATC 1 cut(s) 1958
EcoT14I CCWWGG 6 cut(s) 54, 210, 748, 861, 2151, 2409
ErhI CCWWGG 6 cut(s) 54, 210, 748, 861, 2151, 2409
FaqI GGGAC 3 cut(s) 1215, 1531, 2090
FauI CCCGC 1 cut(s) 1507
FauNDI CATATG 4 cut(s) 13, 735, 1006, 1495
FblI GTMKAC 3 cut(s) 606, 2282, 2367
Fnu4HI GCNGC 8 cut(s) 303, 519, 1290, 1464, 1904, 2088, 2613, 2616
FokI GGATG 6 cut(s) 89, 442, 799, 819, 1313, 1337
Fsp4HI GCNGC 8 cut(s) 303, 519, 1290, 1464, 1904, 2088, 2613, 2616
FspBI CTAG 4 cut(s) 438, 1154, 2064, 2609
GlaI GCGC 2 cut(s) 628, 2233
GluI GCNGC 8 cut(s) 303, 519, 1290, 1464, 1904, 2088, 2613, 2616
GsaI CCCAGC 1 cut(s) 398
HaeII RGCGCY 1 cut(s) 630
HaeIII GGCC 4 cut(s) 895, 1333, 2382, 2458
HapII CCGG 3 cut(s) 1189, 1696, 2621
HgaI GACGC 1 cut(s) 617
HhaI GCGC 2 cut(s) 629, 2234
Hin6I GCGC 2 cut(s) 627, 2232
HinP1I GCGC 2 cut(s) 627, 2232
HincII GTYRAC 2 cut(s) 1887, 2283
HindII GTYRAC 2 cut(s) 1887, 2283
HindIII AAGCTT 2 cut(s) 1212, 1870
HinfI GANTC 9 cut(s) 278, 406, 494, 866, 948, 1440, 1634, 2248, 2570
HpaI GTTAAC 1 cut(s) 1887
HpaII CCGG 3 cut(s) 1189, 1696, 2621
HphI GGTGA 4 cut(s) 148, 262, 1133, 1807
Hpy166II GTNNAC 8 cut(s) 328, 607, 1341, 1798, 1887, 2148, 2283, 2368
Hpy8I GTNNAC 8 cut(s) 328, 607, 1341, 1798, 1887, 2148, 2283, 2368
Hpy99I CGWCG 1 cut(s) 130
HpyAV CCTTC 5 cut(s) 396, 791, 815, 1036, 1519
HpyCH4III ACNGT 4 cut(s) 1015, 1206, 1891, 2138
HpyCH4IV ACGT 2 cut(s) 1619, 2244
HpyF10VI GCNNNNNNNGC 9 cut(s) 239, 311, 518, 779, 1690, 1874, 2379, 2464, 2624
HpyF3I CTNAG 9 cut(s) 178, 234, 769, 1175, 1197, 1449, 1873, 2484, 2647
HpySE526I ACGT 2 cut(s) 1619, 2244
HspAI GCGC 2 cut(s) 627, 2232
KpnI GGTACC 1 cut(s) 8
KspAI GTTAAC 1 cut(s) 1887
Kzo9I GATC 9 cut(s) 111, 841, 1099, 1528, 1594, 1845, 2121, 2323, 2539
LmnI GCTCC 4 cut(s) 185, 530, 688, 1286
Lsp1109I GCAGC 8 cut(s) 314, 505, 1301, 1450, 1915, 2074, 2602, 2624
LweI GCATC 1 cut(s) 1552
MaeI CTAG 4 cut(s) 438, 1154, 2064, 2609
MaeII ACGT 2 cut(s) 1619, 2244
MaeIII GTNAC 7 cut(s) 491, 814, 1121, 1859, 1943, 2032, 2245
MalI GATC 9 cut(s) 113, 843, 1101, 1530, 1596, 1847, 2123, 2325, 2541
MboI GATC 9 cut(s) 111, 841, 1099, 1528, 1594, 1845, 2121, 2323, 2539
MfeI CAATTG 2 cut(s) 1584, 1801
MflI RGATCY 2 cut(s) 841, 2539
MhlI GDGCHC 1 cut(s) 1695
MlsI TGGCCA 2 cut(s) 1333, 2458
MluNI TGGCCA 2 cut(s) 1333, 2458
MlyI GAGTC 3 cut(s) 488, 860, 2242
MmeI TCCRAC 8 cut(s) 508, 525, 1027, 1160, 1188, 1278, 1382, 2137
Mox20I TGGCCA 2 cut(s) 1333, 2458
MroXI GAANNNNTTC 3 cut(s) 71, 552, 947
MscI TGGCCA 2 cut(s) 1333, 2458
MslI CAYNNNNRTG 3 cut(s) 209, 666, 2666
Msp20I TGGCCA 2 cut(s) 1333, 2458
MspA1I CMGCKG 1 cut(s) 2615
MspI CCGG 3 cut(s) 1189, 1696, 2621
MspR9I CCNGG 6 cut(s) 42, 108, 274, 1335, 1697, 2622
MunI CAATTG 2 cut(s) 1584, 1801
Mva1269I GAATGC 2 cut(s) 25, 1910
MvaI CCWGG 4 cut(s) 42, 108, 274, 1335
MvnI CGCG 1 cut(s) 1514
MwoI GCNNNNNNNGC 9 cut(s) 239, 311, 518, 779, 1690, 1874, 2379, 2464, 2624
NciI CCSGG 2 cut(s) 1697, 2622
NcoI CCATGG 5 cut(s) 54, 210, 861, 2151, 2409
NdeI CATATG 4 cut(s) 13, 735, 1006, 1495
NdeII GATC 9 cut(s) 111, 841, 1099, 1528, 1594, 1845, 2121, 2323, 2539
NlaIV GGNNCC 6 cut(s) 6, 754, 1274, 2025, 2206, 2352
NmuCI GTSAC 3 cut(s) 491, 1121, 2245
NspI RCATGY 4 cut(s) 242, 2227, 2434, 2585
NspV TTCGAA 1 cut(s) 1419
PaeI GCATGC 1 cut(s) 242
PaeR7I CTCGAG 3 cut(s) 630, 711, 1316
PaqCI CACCTGC 1 cut(s) 2387
PasI CCCWGGG 1 cut(s) 107
PceI AGGCCT 1 cut(s) 2382
PciI ACATGT 2 cut(s) 2223, 2430
PctI GAATGC 2 cut(s) 25, 1910
PdmI GAANNNNTTC 3 cut(s) 71, 552, 947
PfeI GAWTC 6 cut(s) 278, 406, 948, 1440, 1634, 2570
PflMI CCANNNNNTGG 1 cut(s) 2360
PkrI GCNGC 8 cut(s) 304, 520, 1291, 1465, 1905, 2089, 2614, 2617
PleI GAGTC 3 cut(s) 488, 860, 2242
PpsI GAGTC 3 cut(s) 488, 860, 2242
PpuMI RGGWCCY 2 cut(s) 1718, 2205
PscI ACATGT 2 cut(s) 2223, 2430
PshAI GACNNNNGTC 1 cut(s) 1128
PsiI TTATAA 1 cut(s) 666
Psp5II RGGWCCY 2 cut(s) 1718, 2205
Psp6I CCWGG 4 cut(s) 40, 106, 272, 1333
PspEI GGTNACC 1 cut(s) 2032
PspFI CCCAGC 1 cut(s) 394
PspGI CCWGG 4 cut(s) 40, 106, 272, 1333
PspN4I GGNNCC 6 cut(s) 6, 754, 1274, 2025, 2206, 2352
PspPI GGNCC 7 cut(s) 356, 730, 753, 1718, 2159, 2205, 2351
PspPPI RGGWCCY 2 cut(s) 1718, 2205
PspXI VCTCGAGB 2 cut(s) 630, 711
PsrI GAACNNNNNNTAC 2 cut(s) 144, 176
PstI CTGCAG 1 cut(s) 1468
PsuI RGATCY 2 cut(s) 841, 2539
PvuII CAGCTG 1 cut(s) 2615
RsaI GTAC 9 cut(s) 6, 147, 1340, 1842, 1893, 2147, 2429, 2580, 2656
RsaNI GTAC 9 cut(s) 5, 146, 1339, 1841, 1892, 2146, 2428, 2579, 2655
RseI CAYNNNNRTG 3 cut(s) 209, 666, 2666
SalI GTCGAC 1 cut(s) 2281
SatI GCNGC 8 cut(s) 303, 519, 1290, 1464, 1904, 2088, 2613, 2616
Sau3AI GATC 9 cut(s) 111, 841, 1099, 1528, 1594, 1845, 2121, 2323, 2539
Sau96I GGNCC 7 cut(s) 356, 730, 753, 1718, 2159, 2205, 2351
SchI GAGTC 3 cut(s) 488, 860, 2242
ScrFI CCNGG 6 cut(s) 42, 108, 274, 1335, 1697, 2622
SduI GDGCHC 1 cut(s) 1695
SfaNI GCATC 1 cut(s) 1552
SfcI CTRYAG 3 cut(s) 1344, 1464, 2368
Sfr274I CTCGAG 3 cut(s) 630, 711, 1316
SfuI TTCGAA 1 cut(s) 1419
SinI GGWCC 7 cut(s) 356, 730, 753, 1718, 2159, 2205, 2351
SlaI CTCGAG 3 cut(s) 630, 711, 1316
SmiI ATTTAAAT 1 cut(s) 2001
SmiMI CAYNNNNRTG 3 cut(s) 209, 666, 2666
SmlI CTYRAG 7 cut(s) 501, 630, 711, 1316, 1688, 2114, 2250
SmoI CTYRAG 7 cut(s) 501, 630, 711, 1316, 1688, 2114, 2250
SpeI ACTAGT 1 cut(s) 437
SphI GCATGC 1 cut(s) 242
SseBI AGGCCT 1 cut(s) 2382
SsiI CCGC 2 cut(s) 1245, 1514
SspI AATATT 1 cut(s) 723
SspMI CTAG 4 cut(s) 438, 1154, 2064, 2609
StuI AGGCCT 1 cut(s) 2382
StyD4I CCNGG 6 cut(s) 40, 106, 272, 1333, 1695, 2620
StyI CCWWGG 6 cut(s) 54, 210, 748, 861, 2151, 2409
SwaI ATTTAAAT 1 cut(s) 2001
TaaI ACNGT 4 cut(s) 1015, 1206, 1891, 2138
TaiI ACGT 2 cut(s) 1622, 2247
TaqI TCGA 8 cut(s) 114, 631, 712, 830, 1317, 1419, 1880, 2282
TatI WGTACW 3 cut(s) 2145, 2427, 2578
TfiI GAWTC 6 cut(s) 278, 406, 948, 1440, 1634, 2570
TscAI CASTG 4 cut(s) 186, 1041, 1870, 1921
TseFI GTSAC 3 cut(s) 491, 1121, 2245
TseI GCWGC 8 cut(s) 302, 518, 1289, 1463, 1903, 2087, 2612, 2615
Tsp45I GTSAC 3 cut(s) 491, 1121, 2245
TspGWI ACGGA 2 cut(s) 833, 1909
TspRI CASTG 4 cut(s) 186, 1041, 1870, 1921
Van91I CCANNNNNTGG 1 cut(s) 2360
VpaK11BI GGWCC 7 cut(s) 356, 730, 753, 1718, 2159, 2205, 2351
XbaI TCTAGA 1 cut(s) 2063
XceI RCATGY 4 cut(s) 242, 2227, 2434, 2585
XcmI CCANNNNNNNNNTGG 1 cut(s) 2149
XhoI CTCGAG 3 cut(s) 630, 711, 1316
XmiI GTMKAC 3 cut(s) 606, 2282, 2367
XmnI GAANNNNTTC 3 cut(s) 71, 552, 947
XspI CTAG 4 cut(s) 438, 1154, 2064, 2609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.