Rmu_sc0004502.1_g000016

ABC transporter I family member

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004502.1
Physical Location & Seq
Forward (+)
64304 .. 66692
2389 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004502.1_g000016.1.cds

Sequence Viewer

Length: 1014 bp
atggcagcttgttccccaagtaagtcatcgcctatatataaccactgcaagtggcctagttgttcttgcctagttgggtgtgctccccaacctaggttggaaccccaaagctgtcaaagtggccaggcactgtgctgcaatgcacagttgaagcatttcacatgcgccgaaggggtttatcttgggcctaggaagcctttggaaaccccaaccccaggtccaaacccgacccaatcccccaccaccctcctccacctcgctttcaaccaagaccacacctgcttctctaccgccaccgacttcggcttccgcgtctacacctgcgacccctccggtctacgcggcggcgttggattcgtccagatgctcttccactgccactacttcgccgtcttcggcggcggacccgacctgttctgcacgcccaacaaggtcatgatctacgacgatcgccagtcccgctgcgtcagcgagctcttgttccagtccgaggtcaagtcggtcaggctccgccgcgaccgcatctggaaaaccctaagggactgtgttccgcccgacgccaagcctctaatcgacgacttctccctcaccctcaacatcggcgaccgatgcctcctcgttggatccaacggcgccggcaaaaccatgatcctcaggattcttggaggcaagcacatggtccgggttatgggtcgctcggctttccacgacaccgctctcaccggcttcggcgacctgtcgtacctaggcggagagtggcggcgtgacgtggcctttgctggtttcgacgttccgatacagatggatgtttgggctgataaattgatcaacggggtagctgggattgacccacaaaggagagctgagctgatcaaggtgcttctgcttgatgagatcacggtggaccttgatgtgctagcgacggcggacctgctccaattcttgaggaaggaatgtgaggagcaaggtgctatgatcgtttctcaagccccaaattggagagagagagtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

337

Amino Acids

37.26

Weight (kDa)

7.03

Isoelectric Point (pI)

47.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 287, 329
Acc36I ACCTGC 3 cut(s) 287, 329, 939
AccB1I GGYRCC 1 cut(s) 632
AccBSI CCGCTC 1 cut(s) 716
AccI GTMKAC 2 cut(s) 315, 337
AccII CGCG 3 cut(s) 312, 342, 516
AclWI GGATC 3 cut(s) 618, 631, 643
AcoI YGGCCR 1 cut(s) 121
AcyI GRCGYC 2 cut(s) 558, 633
AfaI GTAC 1 cut(s) 743
AfiI CCNNNNNNNGG 5 cut(s) 93, 215, 490, 688, 996
AgsI TTSAA 2 cut(s) 151, 265
AjiI CACGTC 1 cut(s) 769
AjnI CCWGG 2 cut(s) 123, 214
AluBI AGCT 6 cut(s) 8, 111, 475, 839, 863, 868
AluI AGCT 6 cut(s) 8, 111, 475, 839, 863, 868
Alw21I GWGCWC 2 cut(s) 85, 477
AlwI GGATC 3 cut(s) 618, 631, 643
AlwNI CAGNNNCTG 1 cut(s) 130
AoxI GGCC 4 cut(s) 53, 121, 185, 771
ApeKI GCWGC 3 cut(s) 5, 135, 462
ArsI GACNNNNNNTTYG 2 cut(s) 758, 790
Asp700I GAANNNNTTC 1 cut(s) 155
AspA2I CCTAGG 3 cut(s) 92, 188, 745
AspLEI GCGC 2 cut(s) 167, 635
AspS9I GGNCC 6 cut(s) 185, 218, 404, 679, 904, 928
AsuC2I CCSGG 1 cut(s) 683
AsuHPI GGTGA 2 cut(s) 580, 712
AsuNHI GCTAGC 1 cut(s) 916
AvaII GGWCC 5 cut(s) 218, 404, 679, 904, 928
AvrII CCTAGG 3 cut(s) 92, 188, 745
AxyI CCTNAGG 2 cut(s) 536, 653
BalI TGGCCA 1 cut(s) 123
BamHI GGATCC 1 cut(s) 623
BanI GGYRCC 1 cut(s) 632
BanII GRGCYC 1 cut(s) 477
BbsI GAAGAC 1 cut(s) 385
Bbv12I GWGCWC 2 cut(s) 85, 477
BbvI GCAGC 3 cut(s) 17, 122, 449
BccI CCATC 1 cut(s) 796
BceAI ACGGC 3 cut(s) 374, 646, 939
BciT130I CCWGG 2 cut(s) 125, 216
BclI TGATCA 2 cut(s) 825, 870
BcnI CCSGG 1 cut(s) 683
BfaI CTAG 6 cut(s) 57, 71, 93, 189, 746, 917
BfoI RGCGCY 1 cut(s) 636
BfuAI ACCTGC 3 cut(s) 287, 329, 939
BisI GCNGC 8 cut(s) 6, 136, 343, 346, 400, 463, 514, 761
BlnI CCTAGG 3 cut(s) 92, 188, 745
BlpI GCTNAGC 1 cut(s) 864
BlsI GCNGC 8 cut(s) 7, 137, 344, 347, 401, 464, 515, 762
Bme1390I CCNGG 3 cut(s) 125, 216, 683
Bme18I GGWCC 5 cut(s) 218, 404, 679, 904, 928
BmgBI CACGTC 1 cut(s) 769
BmgT120I GGNCC 6 cut(s) 185, 218, 404, 679, 904, 928
BmiI GGNNCC 5 cut(s) 102, 406, 509, 625, 634
BmrFI CCNGG 3 cut(s) 125, 216, 683
BmsI GCATC 3 cut(s) 354, 531, 599
BmtI GCTAGC 1 cut(s) 920
BpiI GAAGAC 1 cut(s) 385
Bpu1102I GCTNAGC 1 cut(s) 864
BpuEI CTTGAG 2 cut(s) 964, 969
BpuMI CCSGG 1 cut(s) 683
BsaHI GRCGYC 2 cut(s) 558, 633
BsaJI CCNNGG 5 cut(s) 92, 188, 214, 489, 745
BsaWI WCCGGW 1 cut(s) 332
BsaXI ACNNNNNCTCC 2 cut(s) 566, 596
Bsc4I CCNNNNNNNGG 5 cut(s) 93, 215, 490, 688, 996
Bse118I RCCGGY 2 cut(s) 635, 722
Bse1I ACTGG 2 cut(s) 454, 484
Bse21I CCTNAGG 2 cut(s) 536, 653
Bse3DI GCAATG 1 cut(s) 145
BseBI CCWGG 2 cut(s) 125, 216
BseDI CCNNGG 5 cut(s) 92, 188, 214, 489, 745
BseGI GGATG 1 cut(s) 811
BseLI CCNNNNNNNGG 5 cut(s) 93, 215, 490, 688, 996
BseMI GCAATG 1 cut(s) 145
BseMII CTCAG 2 cut(s) 667, 855
BseNI ACTGG 2 cut(s) 454, 484
BseRI GAGGAG 3 cut(s) 239, 605, 974
BseXI GCAGC 3 cut(s) 17, 122, 449
BseYI CCCAGC 1 cut(s) 839
BsgI GTGCAG 1 cut(s) 403
Bsh1236I CGCG 3 cut(s) 312, 342, 516
Bsh1285I CGRYCG 3 cut(s) 451, 520, 607
BshFI GGCC 4 cut(s) 55, 123, 187, 773
BshNI GGYRCC 1 cut(s) 632
BsiEI CGRYCG 3 cut(s) 451, 520, 607
BsiHKAI GWGCWC 2 cut(s) 85, 477
BsiSI CCGG 4 cut(s) 333, 636, 682, 723
BslFI GGGAC 2 cut(s) 442, 554
BslI CCNNNNNNNGG 5 cut(s) 93, 215, 490, 688, 996
BsmFI GGGAC 2 cut(s) 442, 554
BsnI GGCC 4 cut(s) 55, 123, 187, 773
Bsp1286I GDGCHC 2 cut(s) 85, 477
Bsp143I GATC 8 cut(s) 438, 448, 623, 648, 825, 870, 894, 975
Bsp1720I GCTNAGC 1 cut(s) 864
BspANI GGCC 4 cut(s) 55, 123, 187, 773
BspCNI CTCAG 2 cut(s) 666, 856
BspFNI CGCG 3 cut(s) 312, 342, 516
BspHI TCATGA 1 cut(s) 435
BspLI GGNNCC 5 cut(s) 102, 406, 509, 625, 634
BspMI ACCTGC 3 cut(s) 287, 329, 939
BspOI GCTAGC 1 cut(s) 920
BspPI GGATC 3 cut(s) 618, 631, 643
BspQI GCTCTTC 1 cut(s) 374
BspT107I GGYRCC 1 cut(s) 632
BsrBI CCGCTC 1 cut(s) 716
BsrDI GCAATG 1 cut(s) 145
BsrFI RCCGGY 2 cut(s) 635, 722
BsrI ACTGG 2 cut(s) 454, 484
BssAI RCCGGY 2 cut(s) 635, 722
BssECI CCNNGG 5 cut(s) 92, 188, 214, 489, 745
BssMI GATC 8 cut(s) 438, 448, 623, 648, 825, 870, 894, 975
BssNI GRCGYC 2 cut(s) 558, 633
BssT1I CCWWGG 3 cut(s) 92, 188, 745
Bst2UI CCWGG 2 cut(s) 125, 216
Bst4CI ACNGT 4 cut(s) 132, 147, 545, 901
Bst6I CTCTTC 1 cut(s) 374
BstACI GRCGYC 2 cut(s) 558, 633
BstC8I GCNNGC 5 cut(s) 422, 473, 637, 671, 918
BstDEI CTNAG 3 cut(s) 536, 653, 864
BstF5I GGATG 1 cut(s) 811
BstFNI CGCG 3 cut(s) 312, 342, 516
BstH2I RGCGCY 1 cut(s) 636
BstHHI GCGC 2 cut(s) 167, 635
BstKTI GATC 8 cut(s) 441, 451, 626, 651, 828, 873, 897, 978
BstMBI GATC 8 cut(s) 438, 448, 623, 648, 825, 870, 894, 975
BstMCI CGRYCG 3 cut(s) 451, 520, 607
BstMWI GCNNNNNNNGC 5 cut(s) 193, 459, 468, 519, 609
BstNI CCWGG 2 cut(s) 125, 216
BstNSI RCATGY 1 cut(s) 165
BstSCI CCNGG 3 cut(s) 123, 214, 681
BstUI CGCG 3 cut(s) 312, 342, 516
BstV1I GCAGC 3 cut(s) 17, 122, 449
BstV2I GAAGAC 1 cut(s) 385
BstX2I RGATCY 1 cut(s) 623
BstYI RGATCY 1 cut(s) 623
Bsu36I CCTNAGG 2 cut(s) 536, 653
BsuRI GGCC 4 cut(s) 55, 123, 187, 773
BtgZI GCGATG 1 cut(s) 12
BtrI CACGTC 1 cut(s) 769
BtsCI GGATG 1 cut(s) 811
BtsI GCAGTG 2 cut(s) 43, 373
BtsIMutI CAGTG 3 cut(s) 43, 128, 373
BveI ACCTGC 3 cut(s) 287, 329, 939
Cac8I GCNNGC 5 cut(s) 422, 473, 637, 671, 918
CaiI CAGNNNCTG 1 cut(s) 130
CciI TCATGA 1 cut(s) 435
CfoI GCGC 2 cut(s) 167, 635
Cfr10I RCCGGY 2 cut(s) 635, 722
Cfr13I GGNCC 6 cut(s) 185, 218, 404, 679, 904, 928
CseI GACGC 3 cut(s) 301, 454, 566
Csp6I GTAC 1 cut(s) 742
CviAII CATG 4 cut(s) 162, 436, 646, 676
CviQI GTAC 1 cut(s) 742
DdeI CTNAG 3 cut(s) 536, 653, 864
DinI GGCGCC 1 cut(s) 634
DpnI GATC 8 cut(s) 440, 450, 625, 650, 827, 872, 896, 977
DpnII GATC 8 cut(s) 438, 448, 623, 648, 825, 870, 894, 975
EaeI YGGCCR 1 cut(s) 121
Eam1104I CTCTTC 1 cut(s) 374
EarI CTCTTC 1 cut(s) 374
EciI GGCGGA 5 cut(s) 417, 500, 540, 765, 941
Ecl136II GAGCTC 1 cut(s) 475
Eco130I CCWWGG 3 cut(s) 92, 188, 745
Eco24I GRGCYC 1 cut(s) 477
Eco47I GGWCC 5 cut(s) 218, 404, 679, 904, 928
Eco53kI GAGCTC 1 cut(s) 475
Eco81I CCTNAGG 2 cut(s) 536, 653
EcoICRI GAGCTC 1 cut(s) 475
EcoRII CCWGG 2 cut(s) 123, 214
EcoT14I CCWWGG 3 cut(s) 92, 188, 745
EcoT38I GRGCYC 1 cut(s) 477
EgeI GGCGCC 1 cut(s) 634
EheI GGCGCC 1 cut(s) 634
ErhI CCWWGG 3 cut(s) 92, 188, 745
FaeI CATG 4 cut(s) 165, 439, 649, 679
FaiI YATR 9 cut(s) 35, 37, 39, 163, 437, 647, 677, 689, 974
FaqI GGGAC 2 cut(s) 442, 554
FatI CATG 4 cut(s) 161, 435, 645, 675
FauI CCCGC 1 cut(s) 467
FbaI TGATCA 2 cut(s) 825, 870
FblI GTMKAC 2 cut(s) 315, 337
Fnu4HI GCNGC 8 cut(s) 6, 136, 343, 346, 400, 463, 514, 761
FokI GGATG 1 cut(s) 818
FriOI GRGCYC 1 cut(s) 477
Fsp4HI GCNGC 8 cut(s) 6, 136, 343, 346, 400, 463, 514, 761
FspBI CTAG 6 cut(s) 57, 71, 93, 189, 746, 917
GlaI GCGC 2 cut(s) 166, 634
GluI GCNGC 8 cut(s) 6, 136, 343, 346, 400, 463, 514, 761
GsaI CCCAGC 1 cut(s) 843
HaeII RGCGCY 1 cut(s) 636
HaeIII GGCC 4 cut(s) 55, 123, 187, 773
HapII CCGG 4 cut(s) 333, 636, 682, 723
HgaI GACGC 3 cut(s) 301, 454, 566
HhaI GCGC 2 cut(s) 167, 635
Hin1I GRCGYC 2 cut(s) 558, 633
Hin1II CATG 4 cut(s) 165, 439, 649, 679
Hin6I GCGC 2 cut(s) 165, 633
HinP1I GCGC 2 cut(s) 165, 633
HinfI GANTC 3 cut(s) 354, 658, 1008
HpaII CCGG 4 cut(s) 333, 636, 682, 723
HphI GGTGA 2 cut(s) 580, 712
Hpy166II GTNNAC 3 cut(s) 316, 338, 904
Hpy188I TCNGA 3 cut(s) 490, 795, 1013
Hpy188III TCNNGA 5 cut(s) 361, 436, 526, 655, 943
Hpy8I GTNNAC 3 cut(s) 316, 338, 904
Hpy99I CGWCG 5 cut(s) 449, 560, 578, 791, 925
HpyAV CCTTC 2 cut(s) 164, 943
HpyCH4III ACNGT 4 cut(s) 132, 147, 545, 901
HpyCH4IV ACGT 2 cut(s) 768, 789
HpyCH4V TGCA 4 cut(s) 48, 138, 143, 420
HpyF10VI GCNNNNNNNGC 5 cut(s) 193, 459, 468, 519, 609
HpyF3I CTNAG 3 cut(s) 536, 653, 864
HpySE526I ACGT 2 cut(s) 768, 789
Hsp92I GRCGYC 2 cut(s) 558, 633
Hsp92II CATG 4 cut(s) 165, 439, 649, 679
HspAI GCGC 2 cut(s) 165, 633
KasI GGCGCC 1 cut(s) 632
KroI GCCGGC 1 cut(s) 635
KroNI GCCGGC 1 cut(s) 637
Ksp22I TGATCA 2 cut(s) 825, 870
Kzo9I GATC 8 cut(s) 438, 448, 623, 648, 825, 870, 894, 975
LguI GCTCTTC 1 cut(s) 374
LmnI GCTCC 4 cut(s) 88, 513, 939, 961
Lsp1109I GCAGC 3 cut(s) 17, 122, 449
LweI GCATC 3 cut(s) 354, 531, 599
MaeI CTAG 6 cut(s) 57, 71, 93, 189, 746, 917
MaeII ACGT 2 cut(s) 768, 789
MaeIII GTNAC 1 cut(s) 764
MalI GATC 8 cut(s) 440, 450, 625, 650, 827, 872, 896, 977
MbiI CCGCTC 1 cut(s) 716
MboI GATC 8 cut(s) 438, 448, 623, 648, 825, 870, 894, 975
MboII GAAGA 2 cut(s) 361, 385
MflI RGATCY 1 cut(s) 623
MhlI GDGCHC 2 cut(s) 85, 477
MlsI TGGCCA 1 cut(s) 123
MluCI AATT 3 cut(s) 821, 938, 994
MluNI TGGCCA 1 cut(s) 123
Mly113I GGCGCC 1 cut(s) 633
MmeI TCCRAC 4 cut(s) 78, 331, 601, 651
Mox20I TGGCCA 1 cut(s) 123
MroNI GCCGGC 1 cut(s) 635
MroXI GAANNNNTTC 1 cut(s) 155
MscI TGGCCA 1 cut(s) 123
Msp20I TGGCCA 1 cut(s) 123
MspA1I CMGCKG 1 cut(s) 462
MspI CCGG 4 cut(s) 333, 636, 682, 723
MspR9I CCNGG 3 cut(s) 125, 216, 683
MvaI CCWGG 2 cut(s) 125, 216
MvnI CGCG 3 cut(s) 312, 342, 516
MwoI GCNNNNNNNGC 5 cut(s) 193, 459, 468, 519, 609
NaeI GCCGGC 1 cut(s) 637
NarI GGCGCC 1 cut(s) 633
NciI CCSGG 1 cut(s) 683
NdeII GATC 8 cut(s) 438, 448, 623, 648, 825, 870, 894, 975
NgoMIV GCCGGC 1 cut(s) 635
NheI GCTAGC 1 cut(s) 916
NlaIII CATG 4 cut(s) 165, 439, 649, 679
NlaIV GGNNCC 5 cut(s) 102, 406, 509, 625, 634
NmeAIII GCCGAG 1 cut(s) 677
NmuCI GTSAC 1 cut(s) 764
NspI RCATGY 1 cut(s) 165
PagI TCATGA 1 cut(s) 435
PaqCI CACCTGC 2 cut(s) 287, 329
PciSI GCTCTTC 1 cut(s) 374
PcsI WCGNNNNNNNCGW 1 cut(s) 309
PdiI GCCGGC 1 cut(s) 637
PdmI GAANNNNTTC 1 cut(s) 155
PfeI GAWTC 2 cut(s) 354, 658
PkrI GCNGC 8 cut(s) 7, 137, 344, 347, 401, 464, 515, 762
Ple19I CGATCG 1 cut(s) 451
PluTI GGCGCC 1 cut(s) 636
Psp124BI GAGCTC 1 cut(s) 477
Psp6I CCWGG 2 cut(s) 123, 214
PspFI CCCAGC 1 cut(s) 839
PspGI CCWGG 2 cut(s) 123, 214
PspN4I GGNNCC 5 cut(s) 102, 406, 509, 625, 634
PspPI GGNCC 6 cut(s) 185, 218, 404, 679, 904, 928
PstNI CAGNNNCTG 1 cut(s) 130
PsuI RGATCY 1 cut(s) 623
PvuI CGATCG 1 cut(s) 451
RsaI GTAC 1 cut(s) 743
RsaNI GTAC 1 cut(s) 742
SacI GAGCTC 1 cut(s) 477
SapI GCTCTTC 1 cut(s) 374
SatI GCNGC 8 cut(s) 6, 136, 343, 346, 400, 463, 514, 761
Sau3AI GATC 8 cut(s) 438, 448, 623, 648, 825, 870, 894, 975
Sau96I GGNCC 6 cut(s) 185, 218, 404, 679, 904, 928
ScrFI CCNGG 3 cut(s) 125, 216, 683
SduI GDGCHC 2 cut(s) 85, 477
SfaNI GCATC 3 cut(s) 354, 531, 599
SfoI GGCGCC 1 cut(s) 634
SinI GGWCC 5 cut(s) 218, 404, 679, 904, 928
SmlI CTYRAG 2 cut(s) 943, 984
SmoI CTYRAG 2 cut(s) 943, 984
Sse9I AATT 3 cut(s) 821, 938, 994
SspDI GGCGCC 1 cut(s) 632
SspMI CTAG 6 cut(s) 57, 71, 93, 189, 746, 917
SstI GAGCTC 1 cut(s) 477
StyD4I CCNGG 3 cut(s) 123, 214, 681
StyI CCWWGG 3 cut(s) 92, 188, 745
TaaI ACNGT 4 cut(s) 132, 147, 545, 901
TaiI ACGT 2 cut(s) 771, 792
TaqI TCGA 2 cut(s) 573, 786
TaqII GACCGA 2 cut(s) 490, 621
TasI AATT 3 cut(s) 821, 938, 994
TauI GCSGC 5 cut(s) 345, 348, 402, 516, 763
TfiI GAWTC 2 cut(s) 354, 658
TscAI CASTG 3 cut(s) 50, 135, 380
TseFI GTSAC 1 cut(s) 764
TseI GCWGC 3 cut(s) 5, 135, 462
Tsp45I GTSAC 1 cut(s) 764
TspRI CASTG 3 cut(s) 50, 135, 380
VpaK11BI GGWCC 5 cut(s) 218, 404, 679, 904, 928
XceI RCATGY 1 cut(s) 165
XmaJI CCTAGG 3 cut(s) 92, 188, 745
XmiI GTMKAC 2 cut(s) 315, 337
XmnI GAANNNNTTC 1 cut(s) 155
XspI CTAG 6 cut(s) 57, 71, 93, 189, 746, 917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.