Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012331.1

Orthogroup ID

OG0002267

Physical Location & Seq

Genomic Coordinates Reverse (-)

11218 .. 16522

Gene Structure 5305 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012331.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

atgtatcgacctacgtgggcgcattcgactccggttggccctcagcggtggcaagagacttgggctcgcctacttactcctttcaccctttggatatgtgtttcggtgagcattcgatatggttattatggagacaaccgtatggagcttggcccaagctcctcgcgcttgatgagggctagttctgtttttgtacaacaagttgtagtgagagatgttgataagaaaggggtttctctctatgctttttctgaagagcctgagttgagccaccaagctaattggagtgtgtctgactatttgattattaagacctatagtcgcaagggattttctttctggttaaacaagggttcaaggatatccatgagattggaagctcaccctgctcatgtaaatcaactccaagttgtcatgcttaaaggggaacggaaattagtagtactgcagccgaaccaaacaagttttgtgaatgcctttaatgaatccaatattggtaaagaagctgaatatagcattgaggaagatgacaggtactaccttgatatcataaacacaaatcctaaaagcataatcatacagatgaatgtaaatgtttcatcgaagatgcatgatactacgaatgctaaggccatctgctcgacagaaaataaggcttcttcgtgccagctcaggcttatattccccaatactcattatgtcatactgaccacacctaacaatggggatcttcttggatggtacatcgagctttcttttgtggctcgtgtgataacatatattggaattttagggtttatagtggtcatgatctttctaatattgaaataccttggcgcctgtgatgctgagagtagtactgtagtagaagacacaagacaagaaattagtgagacttaccctatagtgccacgcaagacagttccacaaacatatggtacaaatgaagaagatgatgattcaggagcttcgagtagctcctcagaggaattatatgatgagaagctatgcgtgatttgttatgatgagcagcggaactgcttcttcgttccttgtggtcactgtgctacctgctatgactgtgctcagaggatcatggatggggagagtaagtacatcagcttcagagttgcagagatcaacatagccatggaaacctcattccattactacattttgctcttcattatttatcttctcctcaagaactacttgcagaaaaataacaaaagactcccaccaagcccttctctatctttccctatcacaggtcatctctacctcatcaagaaacccctccacagaacacttgcaaaactagccaacaaatatggatcaatcttgtacatcaagtgcggctcccgccctgtcgtcattgtatcttctccttctgcagctgaggaatgcttcaccaaaaatgacattgcttttgctaaccgccctgggctgcttgccggaaaacacctaggatataaatacaccacccttgtctgggcctcttatggctctcactggcgcaacttgaggcgcatagcttcccttgagctattgtcatctcgccgccttcagatgtttcatggaatacgtgcagatgaagtcagatcattgattttacgccttttccgaggttccattggtggtgagttttacattgtggacatgaagtcgacgtttttccagctgactcttaatgttatcatgaggatgattgctggaaaaagatactatgaggaagacaggacaggattggaggaagctaagaggtttgaacagattgtggtagagacatttcaattgagtggagctactaacattggagattttgtaccagttttgaaatatgttggatcaaatgggcttgaaaaaaagttgttgatattgcaaaagaagagggacaagttcatgcaagatttgattgaagaacatagaagagggcagagtggctctgtttctgaacagaggagcaagaccatggtggatgtgttgctgtcactgcaagaaactgaacctgaatactacactgatgaaatcataagaggcctgatgcaagtgatgttatcagcaggaacagaaacctcagctggaaccatggaatggggcttttcacttttgctcaacaatccagaagccctagcaaaagcacagacagaaattgatgtccaaattgggcaaaccaggctcatagaggaagcagaccttgccaaccttccctatctccatggcatcataaacgagaccctcagaatgtacccagcagccccacttctagtacaccccatgagtcatcacaagagtgtacactgggaggctaccatatcccacgtggcacaatgctgtatgtgggccatacagaatgatcccaaattgtgggagcagcctgagcagttcaagccagagagatttttaactccacagaaggaagcaaacggtttcaagttgctgccatttgggacaggaaggaggggctgtcccggcgaagggttagcgaccagaatcgtagggctggccttagggtcactgatccagtgtttcgagtggaagagaaatggtgaagaaatggtggacatgagtgaaggggctggcctcaccgtgcctaaagctcaagccttactagcgaagtgcaggccacgcccgataatgctagccctactttcacagctctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00140 ko00232 ko00380 ko00591 ko00830 ko00905 ko00943 ko00980 ko00982 ko01100 ko01110 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00232 map00380 map00591 map00830 map00905 map00943 map00980 map00982 map01100 map01110 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

887

Amino Acids

100.7

Weight (kDa)

7.97

Isoelectric Point (pI)

45.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002267)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g33451 FvH4_2g33470 FvH4_2g33471 FvH4_2g33490
malus_domestica	MD08G1090000.v1.1 MD15G1074600.v1.1 MD15G1074800.v1.1
prunus_persica	Prupe.1G427100_v2.0.a1 Prupe.1G427300_v2.0.a1
pyrus_communis	pycom15g06960 pycom15g06970
rosa_chinensis	RchiOBHm_Chr6g0309031 RchiOBHm_Chr6g0309071
rosa_laevigata	RLG00000010592 RLG00000010595 RLG00000010596
rosa_multiflora	Rmu_co8367281.1_g000001 Rmu_co8411305.1_g000001 Rmu_sc0012331.1_g000004 Rmu_sc0012331.1_g000005 Rmu_sc0012331.1_g000007 Rmu_sc0019440.1_g000001 Rmu_sc0034731.1_g000001 Rmu_sc0040393.1_g000001
rosa_roxburghii	Rroxscaffold_7G00159670 Rroxscaffold_7G00159710 Rroxscaffold_7G00159720 Rroxscaffold_7G00159730
rosa_rugosa	Rorug06G0369400 Rorug07G0309400.1
rosa_samantha	Rh6AG481800 Rh6AG481900 Rh6AG482200 Rh6BG490800 Rh6BG491100 Rh6DG482300 Rh6DG482400 Rh6DG482500 Rh7BG435000 Rh7BG435400
rosa_wichuraiana	Rw6G041950 Rw6G041960 Rw6G041980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1079
AccB1I	GGYRCC	1 cut(s)	836
AccB7I	CCANNNNNTGG	2 cut(s)	2094, 2367
AccI	GTMKAC	1 cut(s)	1667
AccII	CGCG	1 cut(s)	166
AciI	CCGC	6 cut(s)	46, 1033, 1356, 1363, 1438, 1561
AclWI	GGATC	6 cut(s)	735, 1100, 1342, 1855, 2351, 2515
AcsI	RAATTY	1 cut(s)	786
AcuI	CTGAAG	3 cut(s)	273, 1108, 1550
AcvI	CACGTG	1 cut(s)	2323
AcyI	GRCGYC	1 cut(s)	837
AfiI	CCNNNNNNNGG	8 cut(s)	722, 1268, 1491, 1492, 2094, 2367, 2477, 2478
AgsI	TTSAA	9 cut(s)	357, 826, 1769, 1793, 1837, 1862, 1919, 2389, 2434
AhdI	GACNNNNNGTC	2 cut(s)	318, 1663
AjnI	CCWGG	2 cut(s)	1441, 2174
AjuI	GAANNNNNNNTTGG	2 cut(s)	477, 509
AleI	CACNNNNGTG	1 cut(s)	2292
Alw21I	GWGCWC	1 cut(s)	1087
Alw26I	GTCTC	5 cut(s)	50, 126, 887, 1778, 2228
AlwI	GGATC	6 cut(s)	735, 1100, 1342, 1855, 2351, 2515
AoxI	GGCC	9 cut(s)	37, 151, 630, 1494, 2038, 2343, 2505, 2581, 2624
ApeKI	GCWGC	7 cut(s)	448, 1030, 1394, 1447, 2255, 2374, 2440
ApoI	RAATTY	1 cut(s)	786
ArsI	GACNNNNNNTTYG	2 cut(s)	1412, 1444
Asp700I	GAANNNNTTC	1 cut(s)	1040
AspA2I	CCTAGG	1 cut(s)	1465
AspLEI	GCGC	5 cut(s)	22, 168, 839, 1518, 1530
AspS9I	GGNCC	4 cut(s)	38, 152, 1494, 2343
AsuC2I	CCSGG	1 cut(s)	2472
AsuHPI	GGTGA	7 cut(s)	76, 118, 374, 1402, 1652, 2561, 2578
AsuNHI	GCTAGC	1 cut(s)	2641
AvrII	CCTAGG	1 cut(s)	1465
AxyI	CCTNAGG	1 cut(s)	2509
BanI	GGYRCC	1 cut(s)	836
BanII	GRGCYC	1 cut(s)	67
BarI	GAAGNNNNNNTAC	2 cut(s)	1106, 1138
BauI	CACGAG	1 cut(s)	765
BbrPI	CACGTG	1 cut(s)	2323
BbsI	GAAGAC	2 cut(s)	876, 1740
Bbv12I	GWGCWC	1 cut(s)	1087
BbvCI	CCTCAGC	3 cut(s)	42, 1398, 2077
BbvI	GCAGC	7 cut(s)	460, 1042, 1406, 1434, 2267, 2386, 2427
BccI	CCATC	3 cut(s)	641, 732, 1094
BciT130I	CCWGG	2 cut(s)	1443, 2176
BcnI	CCSGG	1 cut(s)	2472
BcoDI	GTCTC	5 cut(s)	50, 126, 887, 1778, 2228
BfaI	CTAG	8 cut(s)	180, 1319, 1466, 2132, 2267, 2612, 2642, 2662
BfmI	CTRYAG	5 cut(s)	316, 446, 861, 903, 1392
BfoI	RGCGCY	1 cut(s)	840
BfuAI	ACCTGC	1 cut(s)	1079
BisI	GCNGC	9 cut(s)	449, 1031, 1357, 1395, 1448, 1561, 2256, 2375, 2441
BlnI	CCTAGG	1 cut(s)	1465
BlsI	GCNGC	9 cut(s)	450, 1032, 1358, 1396, 1449, 1562, 2257, 2376, 2442
BmcAI	AGTACT	2 cut(s)	444, 859
Bme1390I	CCNGG	3 cut(s)	1443, 2176, 2472
BmeRI	GACNNNNNGTC	2 cut(s)	318, 1663
BmgT120I	GGNCC	4 cut(s)	38, 152, 1494, 2343
BmiI	GGNNCC	4 cut(s)	838, 1360, 1630, 2086
BmrFI	CCNGG	3 cut(s)	1443, 2176, 2472
BmrI	ACTGGG	1 cut(s)	2311
BmsI	GCATC	4 cut(s)	597, 835, 2034, 2232
BmtI	GCTAGC	1 cut(s)	2645
BmuI	ACTGGG	1 cut(s)	2311
BpiI	GAAGAC	2 cut(s)	876, 1740
Bpu10I	CCTNAGC	6 cut(s)	42, 627, 671, 1398, 2077, 2379
BpuEI	CTTGAG	4 cut(s)	1187, 1543, 1562, 2586
BpuMI	CCSGG	1 cut(s)	2472
BsaAI	YACGTR	3 cut(s)	15, 1586, 2323
BsaHI	GRCGYC	1 cut(s)	837
BsaI	GGTCTC	1 cut(s)	2228
BsaJI	CCNNGG	9 cut(s)	832, 1149, 1441, 1442, 1465, 1624, 1971, 2088, 2218
BsaWI	WCCGGW	1 cut(s)	31
BsaXI	ACNNNNNCTCC	6 cut(s)	1097, 1127, 1809, 1839, 2452, 2482
Bsc4I	CCNNNNNNNGG	8 cut(s)	722, 1268, 1491, 1492, 2094, 2367, 2477, 2478
Bse1I	ACTGG	4 cut(s)	1517, 1829, 2306, 2524
Bse21I	CCTNAGG	1 cut(s)	2509
Bse3DI	GCAATG	1 cut(s)	1422
BseBI	CCWGG	2 cut(s)	1443, 2176
BseDI	CCNNGG	9 cut(s)	832, 1149, 1441, 1442, 1465, 1624, 1971, 2088, 2218
BseGI	GGATG	4 cut(s)	743, 1105, 1710, 1984
BseLI	CCNNNNNNNGG	8 cut(s)	722, 1268, 1491, 1492, 2094, 2367, 2477, 2478
BseMI	GCAATG	1 cut(s)	1422
BseNI	ACTGG	4 cut(s)	1517, 1829, 2306, 2524
BseRI	GAGGAG	4 cut(s)	151, 970, 1190, 1975
BseXI	GCAGC	7 cut(s)	460, 1042, 1406, 1434, 2267, 2386, 2427
BseYI	CCCAGC	1 cut(s)	2251
BsgI	GTGCAG	2 cut(s)	1608, 2641
Bsh1236I	CGCG	1 cut(s)	166
BshFI	GGCC	9 cut(s)	39, 153, 632, 1496, 2040, 2345, 2507, 2583, 2626
BshNI	GGYRCC	1 cut(s)	836
BsiHKAI	GWGCWC	1 cut(s)	1087
BsiSI	CCGG	3 cut(s)	32, 1455, 2472
BslFI	GGGAC	3 cut(s)	1907, 2454, 2464
BslI	CCNNNNNNNGG	8 cut(s)	722, 1268, 1491, 1492, 2094, 2367, 2477, 2478
BsmAI	GTCTC	5 cut(s)	50, 126, 887, 1778, 2228
BsmFI	GGGAC	3 cut(s)	1907, 2454, 2464
BsmI	GAATGC	5 cut(s)	22, 111, 478, 628, 1409
BsnI	GGCC	9 cut(s)	39, 153, 632, 1496, 2040, 2345, 2507, 2583, 2626
Bso31I	GGTCTC	1 cut(s)	2228
Bsp1286I	GDGCHC	2 cut(s)	67, 1087
Bsp1407I	TGTACA	3 cut(s)	193, 1344, 2296
Bsp143I	GATC	9 cut(s)	727, 810, 1092, 1137, 1334, 1601, 1847, 2356, 2520
Bsp19I	CCATGG	4 cut(s)	1149, 1971, 2088, 2218
BspACI	CCGC	6 cut(s)	46, 1033, 1356, 1363, 1438, 1561
BspANI	GGCC	9 cut(s)	39, 153, 632, 1496, 2040, 2345, 2507, 2583, 2626
BspFNI	CGCG	1 cut(s)	166
BspHI	TCATGA	2 cut(s)	807, 1698
BspLI	GGNNCC	4 cut(s)	838, 1360, 1630, 2086
BspMAI	CTGCAG	2 cut(s)	450, 1396
BspMI	ACCTGC	1 cut(s)	1079
BspOI	GCTAGC	1 cut(s)	2645
BspPI	GGATC	6 cut(s)	735, 1100, 1342, 1855, 2351, 2515
BspQI	GCTCTTC	2 cut(s)	249, 1187
BspT107I	GGYRCC	1 cut(s)	836
BspTNI	GGTCTC	1 cut(s)	2228
BsrDI	GCAATG	1 cut(s)	1422
BsrGI	TGTACA	3 cut(s)	193, 1344, 2296
BsrI	ACTGG	4 cut(s)	1517, 1829, 2306, 2524
BssECI	CCNNGG	9 cut(s)	832, 1149, 1441, 1442, 1465, 1624, 1971, 2088, 2218
BssMI	GATC	9 cut(s)	727, 810, 1092, 1137, 1334, 1601, 1847, 2356, 2520
BssNI	GRCGYC	1 cut(s)	837
BssSI	CACGAG	1 cut(s)	765
BssT1I	CCWWGG	6 cut(s)	832, 1149, 1465, 1971, 2088, 2218
Bst2BI	CACGAG	1 cut(s)	765
Bst2UI	CCWGG	2 cut(s)	1443, 2176
Bst4CI	ACNGT	7 cut(s)	140, 862, 922, 1064, 1082, 2429, 2590
Bst6I	CTCTTC	5 cut(s)	249, 1187, 1883, 1924, 2534
BstACI	GRCGYC	1 cut(s)	837
BstAPI	GCANNNNNTGC	1 cut(s)	2198
BstAUI	TGTACA	3 cut(s)	193, 1344, 2296
BstBAI	YACGTR	3 cut(s)	15, 1586, 2323
BstC8I	GCNNGC	7 cut(s)	67, 668, 1452, 2505, 2581, 2624, 2643
BstDSI	CCRYGG	4 cut(s)	1149, 1971, 2088, 2218
BstENI	CCTNNNNNAGG	1 cut(s)	1266
BstF5I	GGATG	4 cut(s)	743, 1105, 1710, 1984
BstFNI	CGCG	1 cut(s)	166
BstH2I	RGCGCY	1 cut(s)	840
BstHHI	GCGC	5 cut(s)	22, 168, 839, 1518, 1530
BstKTI	GATC	9 cut(s)	730, 813, 1095, 1140, 1337, 1604, 1850, 2359, 2523
BstMAI	GTCTC	5 cut(s)	50, 126, 887, 1778, 2228
BstMBI	GATC	9 cut(s)	727, 810, 1092, 1137, 1334, 1601, 1847, 2356, 2520
BstNI	CCWGG	2 cut(s)	1443, 2176
BstSCI	CCNGG	3 cut(s)	1441, 2174, 2470
BstSFI	CTRYAG	5 cut(s)	316, 446, 861, 903, 1392
BstUI	CGCG	1 cut(s)	166
BstV1I	GCAGC	7 cut(s)	460, 1042, 1406, 1434, 2267, 2386, 2427
BstV2I	GAAGAC	2 cut(s)	876, 1740
BstX2I	RGATCY	1 cut(s)	727
BstXI	CCANNNNNNTGG	1 cut(s)	373
BstYI	RGATCY	1 cut(s)	727
Bsu36I	CCTNAGG	1 cut(s)	2509
BsuRI	GGCC	9 cut(s)	39, 153, 632, 1496, 2040, 2345, 2507, 2583, 2626
BtgI	CCRYGG	4 cut(s)	1149, 1971, 2088, 2218
BtsCI	GGATG	4 cut(s)	743, 1105, 1710, 1984
BtsI	GCAGTG	1 cut(s)	1991
BtsIMutI	CAGTG	7 cut(s)	1060, 1510, 1991, 2019, 2299, 2516, 2531
BveI	ACCTGC	1 cut(s)	1079
Cac8I	GCNNGC	7 cut(s)	67, 668, 1452, 2505, 2581, 2624, 2643
CciI	TCATGA	2 cut(s)	807, 1698
CfoI	GCGC	5 cut(s)	22, 168, 839, 1518, 1530
Cfr13I	GGNCC	4 cut(s)	38, 152, 1494, 2343
DinI	GGCGCC	1 cut(s)	838
DpnI	GATC	9 cut(s)	729, 812, 1094, 1139, 1336, 1603, 1849, 2358, 2522
DpnII	GATC	9 cut(s)	727, 810, 1092, 1137, 1334, 1601, 1847, 2356, 2520
DriI	GACNNNNNGTC	2 cut(s)	318, 1663
Eam1104I	CTCTTC	5 cut(s)	249, 1187, 1883, 1924, 2534
Eam1105I	GACNNNNNGTC	2 cut(s)	318, 1663
EarI	CTCTTC	5 cut(s)	249, 1187, 1883, 1924, 2534
Eco130I	CCWWGG	6 cut(s)	832, 1149, 1465, 1971, 2088, 2218
Eco147I	AGGCCT	1 cut(s)	2040
Eco24I	GRGCYC	1 cut(s)	67
Eco31I	GGTCTC	1 cut(s)	2228
Eco32I	GATATC	2 cut(s)	363, 547
Eco57I	CTGAAG	3 cut(s)	273, 1108, 1550
Eco72I	CACGTG	1 cut(s)	2323
Eco81I	CCTNAGG	1 cut(s)	2509
EcoNI	CCTNNNNNAGG	1 cut(s)	1266
EcoRII	CCWGG	2 cut(s)	1441, 2174
EcoRV	GATATC	2 cut(s)	363, 547
EcoT14I	CCWWGG	6 cut(s)	832, 1149, 1465, 1971, 2088, 2218
EcoT22I	ATGCAT	1 cut(s)	612
EcoT38I	GRGCYC	1 cut(s)	67
EgeI	GGCGCC	1 cut(s)	838
EheI	GGCGCC	1 cut(s)	838
ErhI	CCWWGG	6 cut(s)	832, 1149, 1465, 1971, 2088, 2218
FalI	AAGNNNNNCTT	4 cut(s)	1196, 1228, 2181, 2213
FaqI	GGGAC	3 cut(s)	1907, 2454, 2464
FauI	CCCGC	1 cut(s)	1370
FauNDI	CATATG	1 cut(s)	934
FblI	GTMKAC	1 cut(s)	1667
Fnu4HI	GCNGC	9 cut(s)	449, 1031, 1357, 1395, 1448, 1561, 2256, 2375, 2441
FokI	GGATG	4 cut(s)	750, 1112, 1717, 1991
FriOI	GRGCYC	1 cut(s)	67
Fsp4HI	GCNGC	9 cut(s)	449, 1031, 1357, 1395, 1448, 1561, 2256, 2375, 2441
FspBI	CTAG	8 cut(s)	180, 1319, 1466, 2132, 2267, 2612, 2642, 2662
GlaI	GCGC	5 cut(s)	21, 167, 838, 1517, 1529
GluI	GCNGC	9 cut(s)	449, 1031, 1357, 1395, 1448, 1561, 2256, 2375, 2441
GsaI	CCCAGC	1 cut(s)	2255
HaeII	RGCGCY	1 cut(s)	840
HaeIII	GGCC	9 cut(s)	39, 153, 632, 1496, 2040, 2345, 2507, 2583, 2626
HapII	CCGG	3 cut(s)	32, 1455, 2472
HhaI	GCGC	5 cut(s)	22, 168, 839, 1518, 1530
Hin1I	GRCGYC	1 cut(s)	837
Hin6I	GCGC	5 cut(s)	20, 166, 837, 1516, 1528
HinP1I	GCGC	5 cut(s)	20, 166, 837, 1516, 1528
HincII	GTYRAC	1 cut(s)	1668
HindII	GTYRAC	1 cut(s)	1668
HinfI	GANTC	7 cut(s)	28, 485, 959, 1233, 1684, 2281, 2493
HpaII	CCGG	3 cut(s)	32, 1455, 2472
HphI	GGTGA	7 cut(s)	76, 118, 374, 1402, 1652, 2561, 2578
Hpy166II	GTNNAC	6 cut(s)	1657, 1668, 2272, 2297, 2299, 2563
Hpy188III	TCNNGA	6 cut(s)	808, 963, 1204, 1288, 1699, 2123
Hpy8I	GTNNAC	6 cut(s)	1657, 1668, 2272, 2297, 2299, 2563
Hpy99I	CGWCG	1 cut(s)	1672
HpyAV	CCTTC	8 cut(s)	1257, 1398, 1574, 2216, 2410, 2451, 2471, 2567
HpyCH4III	ACNGT	7 cut(s)	140, 862, 922, 1064, 1082, 2429, 2590
HpyCH4IV	ACGT	4 cut(s)	14, 1585, 1670, 2322
HpySE526I	ACGT	4 cut(s)	14, 1585, 1670, 2322
Hsp92I	GRCGYC	1 cut(s)	837
HspAI	GCGC	5 cut(s)	20, 166, 837, 1516, 1528
KasI	GGCGCC	1 cut(s)	836
Kzo9I	GATC	9 cut(s)	727, 810, 1092, 1137, 1334, 1601, 1847, 2356, 2520
LguI	GCTCTTC	2 cut(s)	249, 1187
LmnI	GCTCC	8 cut(s)	145, 164, 965, 983, 1364, 1802, 1962, 2371
Lsp1109I	GCAGC	7 cut(s)	460, 1042, 1406, 1434, 2267, 2386, 2427
LweI	GCATC	4 cut(s)	597, 835, 2034, 2232
MaeI	CTAG	8 cut(s)	180, 1319, 1466, 2132, 2267, 2612, 2642, 2662
MaeII	ACGT	4 cut(s)	14, 1585, 1670, 2322
MaeIII	GTNAC	3 cut(s)	1058, 1989, 2514
MalI	GATC	9 cut(s)	729, 812, 1094, 1139, 1336, 1603, 1849, 2358, 2522
MboI	GATC	9 cut(s)	727, 810, 1092, 1137, 1334, 1601, 1847, 2356, 2520
MfeI	CAATTG	1 cut(s)	1793
MflI	RGATCY	1 cut(s)	727
MhlI	GDGCHC	2 cut(s)	67, 1087
MluCI	AATT	9 cut(s)	280, 434, 786, 885, 989, 1793, 2151, 2163, 2363
Mly113I	GGCGCC	1 cut(s)	837
MlyI	GAGTC	4 cut(s)	22, 1227, 1678, 2290
MmeI	TCCRAC	1 cut(s)	1825
Mph1103I	ATGCAT	1 cut(s)	612
MroXI	GAANNNNTTC	1 cut(s)	1040
MseI	TTAA	6 cut(s)	309, 344, 420, 480, 1689, 2405
MslI	CAYNNNNRTG	4 cut(s)	581, 1148, 1703, 2292
MspA1I	CMGCKG	5 cut(s)	46, 1033, 1397, 1681, 2081
MspI	CCGG	3 cut(s)	32, 1455, 2472
MspR9I	CCNGG	3 cut(s)	1443, 2176, 2472
MunI	CAATTG	1 cut(s)	1793
Mva1269I	GAATGC	5 cut(s)	22, 111, 478, 628, 1409
MvaI	CCWGG	2 cut(s)	1443, 2176
MvnI	CGCG	1 cut(s)	166
NarI	GGCGCC	1 cut(s)	837
NciI	CCSGG	1 cut(s)	2472
NcoI	CCATGG	4 cut(s)	1149, 1971, 2088, 2218
NdeI	CATATG	1 cut(s)	934
NdeII	GATC	9 cut(s)	727, 810, 1092, 1137, 1334, 1601, 1847, 2356, 2520
NheI	GCTAGC	1 cut(s)	2641
NlaIV	GGNNCC	4 cut(s)	838, 1360, 1630, 2086
NmuCI	GTSAC	3 cut(s)	1058, 1989, 2514
NsiI	ATGCAT	1 cut(s)	612
OliI	CACNNNNGTG	1 cut(s)	2292
PagI	TCATGA	2 cut(s)	807, 1698
PasI	CCCWGGG	1 cut(s)	1442
PceI	AGGCCT	1 cut(s)	2040
PciSI	GCTCTTC	2 cut(s)	249, 1187
PcsI	WCGNNNNNNNCGW	1 cut(s)	1621
PctI	GAATGC	5 cut(s)	22, 111, 478, 628, 1409
PdmI	GAANNNNTTC	1 cut(s)	1040
PfeI	GAWTC	3 cut(s)	485, 959, 2493
PflMI	CCANNNNNTGG	2 cut(s)	2094, 2367
PkrI	GCNGC	9 cut(s)	450, 1032, 1358, 1396, 1449, 1562, 2257, 2376, 2442
PleI	GAGTC	4 cut(s)	22, 1227, 1678, 2289
PluTI	GGCGCC	1 cut(s)	840
PmaCI	CACGTG	1 cut(s)	2323
PmlI	CACGTG	1 cut(s)	2323
PpsI	GAGTC	4 cut(s)	22, 1227, 1678, 2289
Ppu21I	YACGTR	3 cut(s)	15, 1586, 2323
Psp6I	CCWGG	2 cut(s)	1441, 2174
PspCI	CACGTG	1 cut(s)	2323
PspFI	CCCAGC	1 cut(s)	2251
PspGI	CCWGG	2 cut(s)	1441, 2174
PspN4I	GGNNCC	4 cut(s)	838, 1360, 1630, 2086
PspPI	GGNCC	4 cut(s)	38, 152, 1494, 2343
PstI	CTGCAG	2 cut(s)	450, 1396
PsuI	RGATCY	1 cut(s)	727
PvuII	CAGCTG	3 cut(s)	1397, 1681, 2081
RseI	CAYNNNNRTG	4 cut(s)	581, 1148, 1703, 2292
SalI	GTCGAC	1 cut(s)	1666
SapI	GCTCTTC	2 cut(s)	249, 1187
SaqAI	TTAA	6 cut(s)	309, 344, 420, 480, 1689, 2405
SatI	GCNGC	9 cut(s)	449, 1031, 1357, 1395, 1448, 1561, 2256, 2375, 2441
Sau3AI	GATC	9 cut(s)	727, 810, 1092, 1137, 1334, 1601, 1847, 2356, 2520
Sau96I	GGNCC	4 cut(s)	38, 152, 1494, 2343
ScaI	AGTACT	2 cut(s)	444, 859
SchI	GAGTC	4 cut(s)	22, 1227, 1678, 2290
ScrFI	CCNGG	3 cut(s)	1443, 2176, 2472
SduI	GDGCHC	2 cut(s)	67, 1087
SfaNI	GCATC	4 cut(s)	597, 835, 2034, 2232
SfcI	CTRYAG	5 cut(s)	316, 446, 861, 903, 1392
SfoI	GGCGCC	1 cut(s)	838
SmiMI	CAYNNNNRTG	4 cut(s)	581, 1148, 1703, 2292
SmlI	CTYRAG	4 cut(s)	1202, 1522, 1541, 2601
SmoI	CTYRAG	4 cut(s)	1202, 1522, 1541, 2601
Sse9I	AATT	9 cut(s)	280, 434, 786, 885, 989, 1793, 2151, 2163, 2363
SseBI	AGGCCT	1 cut(s)	2040
SsiI	CCGC	6 cut(s)	46, 1033, 1356, 1363, 1438, 1561
SspDI	GGCGCC	1 cut(s)	836
SspI	AATATT	2 cut(s)	493, 822
SspMI	CTAG	8 cut(s)	180, 1319, 1466, 2132, 2267, 2612, 2642, 2662
StuI	AGGCCT	1 cut(s)	2040
StyD4I	CCNGG	3 cut(s)	1441, 2174, 2470
StyI	CCWWGG	6 cut(s)	832, 1149, 1465, 1971, 2088, 2218
TaaI	ACNGT	7 cut(s)	140, 862, 922, 1064, 1082, 2429, 2590
TaiI	ACGT	4 cut(s)	17, 1588, 1673, 2325
TaqI	TCGA	9 cut(s)	7, 26, 115, 602, 641, 747, 971, 1667, 2532
TasI	AATT	9 cut(s)	280, 434, 786, 885, 989, 1793, 2151, 2163, 2363
TatI	WGTACW	7 cut(s)	193, 442, 857, 1113, 1344, 2269, 2296
TauI	GCSGC	2 cut(s)	1359, 1563
TfiI	GAWTC	3 cut(s)	485, 959, 2493
Tru1I	TTAA	6 cut(s)	309, 344, 420, 480, 1689, 2405
Tru9I	TTAA	6 cut(s)	309, 344, 420, 480, 1689, 2405
TscAI	CASTG	7 cut(s)	1067, 1517, 1998, 2026, 2306, 2523, 2531
TseFI	GTSAC	3 cut(s)	1058, 1989, 2514
TseI	GCWGC	7 cut(s)	448, 1030, 1394, 1447, 2255, 2374, 2440
Tsp45I	GTSAC	3 cut(s)	1058, 1989, 2514
TspGWI	ACGGA	1 cut(s)	445
TspRI	CASTG	7 cut(s)	1067, 1517, 1998, 2026, 2306, 2523, 2531
Van91I	CCANNNNNTGG	2 cut(s)	2094, 2367
XagI	CCTNNNNNAGG	1 cut(s)	1266
XapI	RAATTY	1 cut(s)	786
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2320
XmaJI	CCTAGG	1 cut(s)	1465
XmiI	GTMKAC	1 cut(s)	1667
XmnI	GAANNNNTTC	1 cut(s)	1040
XspI	CTAG	8 cut(s)	180, 1319, 1466, 2132, 2267, 2612, 2642, 2662
ZrmI	AGTACT	2 cut(s)	444, 859
Zsp2I	ATGCAT	1 cut(s)	612

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.