Rh7BG435400

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0002267
Physical Location & Seq
Forward (+)
50010179 .. 50011896
1718 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG435400.1

Sequence Viewer

Length: 1524 bp
ATGGAAACTTCAATCTCCTACTACCTTTGGCTCTTCATTGTCTTTCTTTTCCTCCTCAAGAACTATTTGCAGAAAACTAACAAAAGACTCCCACCAAGCCCTTCTCTTTCCTTTCCCATCATAGGTCATCTCTACCTCTTTAAGAAACCTCTCCACAGAACACTTGCAAAACTAACCGACAAATATGGTCCAATCTTATACCTTCAATTTGGATCCCGCCCGGTTGTTGTTGTTTCCTCTCTTTCTGCAGTTGAGGAATGCTTCACCAAAAACGATGTCACTTTCGCAAACCGTCCAAAGCTGCTTGCCGGCAAGCACCTTGGATATAACTATACTACGATTACCTGGGCTCCCTATGGCTCTCACTGGCGCAACTTGAGACGCATAGCTTCCCTTGAGCTATTGTCATCCAGCCGCCTTCAGATGTTTCACGGCATACGTGCAGATGAAGTTAGGTCACTAATTTACAAGCTTTTTCGAGGGTCTAAAGGTGGTGAACTGCGGAGTTTAGATATGAAGTCAACGTTTTTCGAGCTTACTCTTAATGTTTTGATGAGGGTGATTGCTGGGAAGAGATACTATGGGGAAGACATCGCAGAGTCCAGCGAAGCAAAGAGTTTTGAACAAATTGTGAAAGAGACTTTTCAATTGAGTGGGGCTAACAATATTGGAGATTTCTTGCCAGTTTTAGAGTACTTTGGATCAGGTGGCCTTGAGAAAAAGTTGGTGAAATTGCAAAAGAAGAGGGATACGTTCATGCAATATTTGATCGAAGAACACAGAAAAGTGCAGAGTGGCTCTGTTTCTGAACAGAAGAGCAAGACCATGGTGGATGTCTTGTTGTCGCTGCAAGCAACTGAACCTGAATATTATACTGATGAAATCATAAGAGGCATGATGCAAAACATGTTAACAGCAGGAACAGACACCTCAGCTGGGACCATGGAATGGGCTTTATCACTATTGCTCAACAACCCAGAAGCCCTTGCAAAGGCACAGACAGAAATTGATAACAAAATTGGGCAAAGCAGGCTAATTGAGGAATCAGACCTTGCTAATCTCCCCTATCTCCGCTGCATCATAAATGAGACCCTCAGAATGTACCCAGCAGCCGCACTTCTTCCCCCACATGAGTCATCAGAGGACTGCACCGTGGGAGGCTTCAACGTTCCTCGTGGAACAATGTTGTTGGTGAACGCATGGGCCATACATCATGATCCTAAGTTGTGGGAACAGCCTGAACAATTTAAGCCAGAGAGGTTCCAAAATGCACAAGAAGAAAGAGATGTTTTCATGTACTTTCCATTTGGGACAGGAAGGAGAGGCTGTCCTGGGGAAGGGTTAGCAAACCGGATCGTAGGGCTGGCCTTAGGGTCAGTCATTCAGTGTTTTGAATGGGGAAGAAGTGGTGAGGAGATGGTGGACATGAATGAAGGGACTGGCCTCACAATGCCTAAAGCTCACCCTTTGCTAGCAAAATGCAGGCCACGCCCAACAATGCTGGCCTTCCTTTCTCAACTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko00905 ko00943 ko01100 ko01110 ko04913 ko04917 ko04927 ko04934 map00140 map00905 map00943 map01100 map01110 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

507

Amino Acids

57.49

Weight (kDa)

8.66

Isoelectric Point (pI)

44.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 32 - 487 4.3e-100 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 948
AciI CCGC 5 cut(s) 217, 415, 502, 1072, 1113
AclI AACGTT 2 cut(s) 524, 1167
AclWI GGATC 5 cut(s) 207, 220, 709, 1211, 1361
AcuI CTGAAG 1 cut(s) 404
AfaI GTAC 3 cut(s) 695, 1103, 1298
AfiI CCNNNNNNNGG 5 cut(s) 122, 936, 948, 991, 1337
AflIII ACRYGT 1 cut(s) 906
AgsI TTSAA 6 cut(s) 12, 206, 623, 647, 1165, 1394
AjnI CCWGG 2 cut(s) 344, 1330
AluBI AGCT 7 cut(s) 301, 389, 400, 472, 535, 935, 1460
AluI AGCT 7 cut(s) 301, 389, 400, 472, 535, 935, 1460
Alw26I GTCTC 3 cut(s) 373, 632, 1082
AlwI GGATC 5 cut(s) 207, 220, 709, 1211, 1361
AoxI GGCC 6 cut(s) 709, 1203, 1365, 1441, 1484, 1503
ApeKI GCWGC 4 cut(s) 301, 847, 1074, 1109
ArsI GACNNNNNNTTYG 2 cut(s) 261, 293
AspLEI GCGC 1 cut(s) 372
AspS9I GGNCC 3 cut(s) 188, 939, 1203
AsuC2I CCSGG 1 cut(s) 221
AsuHPI GGTGA 7 cut(s) 256, 506, 571, 739, 1204, 1421, 1454
AsuNHI GCTAGC 1 cut(s) 1471
AvaII GGWCC 2 cut(s) 188, 939
AxyI CCTNAGG 1 cut(s) 1369
BamHI GGATCC 1 cut(s) 212
BanII GRGCYC 1 cut(s) 352
BauI CACGAG 1 cut(s) 1173
BbsI GAAGAC 1 cut(s) 594
BbvCI CCTCAGC 1 cut(s) 931
BbvI GCAGC 4 cut(s) 288, 834, 1061, 1121
BccI CCATC 2 cut(s) 125, 1411
BceAI ACGGC 1 cut(s) 448
BciT130I CCWGG 2 cut(s) 346, 1332
BciVI GTATCC 1 cut(s) 742
BcnI CCSGG 1 cut(s) 221
BcoDI GTCTC 3 cut(s) 373, 632, 1082
BfaI CTAG 1 cut(s) 1472
BfmI CTRYAG 1 cut(s) 246
BfuI GTATCC 1 cut(s) 742
BisI GCNGC 6 cut(s) 302, 415, 848, 1075, 1110, 1113
BlsI GCNGC 6 cut(s) 303, 416, 849, 1076, 1111, 1114
BmcAI AGTACT 1 cut(s) 695
Bme1390I CCNGG 3 cut(s) 221, 346, 1332
Bme18I GGWCC 2 cut(s) 188, 939
BmgT120I GGNCC 3 cut(s) 188, 939, 1203
BmiI GGNNCC 4 cut(s) 214, 351, 940, 1262
BmrFI CCNGG 3 cut(s) 221, 346, 1332
BmsI GCATC 2 cut(s) 888, 1086
BmtI GCTAGC 1 cut(s) 1475
BpiI GAAGAC 1 cut(s) 594
Bpu10I CCTNAGC 1 cut(s) 931
BpuEI CTTGAG 4 cut(s) 41, 397, 416, 734
BpuMI CCSGG 1 cut(s) 221
BsaAI YACGTR 1 cut(s) 440
BsaI GGTCTC 1 cut(s) 1082
BsaJI CCNNGG 6 cut(s) 319, 345, 825, 942, 1152, 1331
BsaWI WCCGGW 1 cut(s) 1350
BsaXI ACNNNNNCTCC 4 cut(s) 334, 364, 1312, 1342
Bsc4I CCNNNNNNNGG 5 cut(s) 122, 936, 948, 991, 1337
Bse118I RCCGGY 1 cut(s) 308
Bse1I ACTGG 3 cut(s) 371, 683, 1444
Bse21I CCTNAGG 1 cut(s) 1369
BseBI CCWGG 2 cut(s) 346, 1332
BseDI CCNNGG 6 cut(s) 319, 345, 825, 942, 1152, 1331
BseGI GGATG 2 cut(s) 407, 838
BseLI CCNNNNNNNGG 5 cut(s) 122, 936, 948, 991, 1337
BseMII CTCAG 2 cut(s) 945, 1108
BseNI ACTGG 3 cut(s) 371, 683, 1444
BseRI GAGGAG 2 cut(s) 44, 1427
BseXI GCAGC 4 cut(s) 288, 834, 1061, 1121
BseYI CCCAGC 3 cut(s) 566, 935, 1105
BsgI GTGCAG 3 cut(s) 462, 809, 1132
BshFI GGCC 6 cut(s) 711, 1205, 1367, 1443, 1486, 1505
BsiSI CCGG 3 cut(s) 221, 309, 1351
BslFI GGGAC 3 cut(s) 952, 1324, 1450
BslI CCNNNNNNNGG 5 cut(s) 122, 936, 948, 991, 1337
BsmAI GTCTC 3 cut(s) 373, 632, 1082
BsmBI CGTCTC 1 cut(s) 373
BsmFI GGGAC 3 cut(s) 952, 1324, 1450
BsmI GAATGC 1 cut(s) 263
BsnI GGCC 6 cut(s) 711, 1205, 1367, 1443, 1486, 1505
Bso31I GGTCTC 1 cut(s) 1082
Bsp1286I GDGCHC 1 cut(s) 352
Bsp143I GATC 5 cut(s) 212, 701, 768, 1216, 1353
Bsp19I CCATGG 2 cut(s) 825, 942
BspACI CCGC 5 cut(s) 217, 415, 502, 1072, 1113
BspANI GGCC 6 cut(s) 711, 1205, 1367, 1443, 1486, 1505
BspCNI CTCAG 2 cut(s) 944, 1107
BspHI TCATGA 1 cut(s) 1213
BspLI GGNNCC 4 cut(s) 214, 351, 940, 1262
BspMAI CTGCAG 1 cut(s) 250
BspOI GCTAGC 1 cut(s) 1475
BspPI GGATC 5 cut(s) 207, 220, 709, 1211, 1361
BspQI GCTCTTC 2 cut(s) 38, 809
BspTNI GGTCTC 1 cut(s) 1082
BsrFI RCCGGY 1 cut(s) 308
BsrI ACTGG 3 cut(s) 371, 683, 1444
BssAI RCCGGY 1 cut(s) 308
BssECI CCNNGG 6 cut(s) 319, 345, 825, 942, 1152, 1331
BssMI GATC 5 cut(s) 212, 701, 768, 1216, 1353
BssSI CACGAG 1 cut(s) 1173
BssT1I CCWWGG 3 cut(s) 319, 825, 942
Bst2BI CACGAG 1 cut(s) 1173
Bst2UI CCWGG 2 cut(s) 346, 1332
Bst4CI ACNGT 2 cut(s) 293, 1153
Bst6I CTCTTC 4 cut(s) 38, 566, 737, 809
BstBAI YACGTR 1 cut(s) 440
BstC8I GCNNGC 9 cut(s) 306, 310, 314, 852, 1031, 1365, 1473, 1484, 1503
BstDEI CTNAG 4 cut(s) 931, 1094, 1221, 1369
BstDSI CCRYGG 3 cut(s) 825, 942, 1152
BstENI CCTNNNNNAGG 2 cut(s) 989, 1335
BstF5I GGATG 2 cut(s) 407, 838
BstHHI GCGC 1 cut(s) 372
BstKTI GATC 5 cut(s) 215, 704, 771, 1219, 1356
BstMAI GTCTC 3 cut(s) 373, 632, 1082
BstMBI GATC 5 cut(s) 212, 701, 768, 1216, 1353
BstMWI GCNNNNNNNGC 2 cut(s) 1030, 1488
BstNI CCWGG 2 cut(s) 346, 1332
BstNSI RCATGY 1 cut(s) 910
BstSCI CCNGG 3 cut(s) 219, 344, 1330
BstSFI CTRYAG 1 cut(s) 246
BstV1I GCAGC 4 cut(s) 288, 834, 1061, 1121
BstV2I GAAGAC 1 cut(s) 594
BstX2I RGATCY 1 cut(s) 212
BstYI RGATCY 1 cut(s) 212
Bsu36I CCTNAGG 1 cut(s) 1369
BsuI GTATCC 1 cut(s) 742
BsuRI GGCC 6 cut(s) 711, 1205, 1367, 1443, 1486, 1505
BtgI CCRYGG 3 cut(s) 825, 942, 1152
BtgZI GCGATG 1 cut(s) 577
BtsCI GGATG 2 cut(s) 407, 838
BtsIMutI CAGTG 2 cut(s) 364, 1391
Cac8I GCNNGC 9 cut(s) 306, 310, 314, 852, 1031, 1365, 1473, 1484, 1503
CciI TCATGA 1 cut(s) 1213
CfoI GCGC 1 cut(s) 372
Cfr10I RCCGGY 1 cut(s) 308
Cfr13I GGNCC 3 cut(s) 188, 939, 1203
CseI GACGC 1 cut(s) 390
Csp6I GTAC 3 cut(s) 694, 1102, 1297
CviQI GTAC 3 cut(s) 694, 1102, 1297
DdeI CTNAG 4 cut(s) 931, 1094, 1221, 1369
DpnI GATC 5 cut(s) 214, 703, 770, 1218, 1355
DpnII GATC 5 cut(s) 212, 701, 768, 1216, 1353
Eam1104I CTCTTC 4 cut(s) 38, 566, 737, 809
EarI CTCTTC 4 cut(s) 38, 566, 737, 809
Eco130I CCWWGG 3 cut(s) 319, 825, 942
Eco24I GRGCYC 1 cut(s) 352
Eco31I GGTCTC 1 cut(s) 1082
Eco47I GGWCC 2 cut(s) 188, 939
Eco57I CTGAAG 1 cut(s) 404
Eco81I CCTNAGG 1 cut(s) 1369
EcoNI CCTNNNNNAGG 2 cut(s) 989, 1335
EcoRII CCWGG 2 cut(s) 344, 1330
EcoT14I CCWWGG 3 cut(s) 319, 825, 942
EcoT38I GRGCYC 1 cut(s) 352
ErhI CCWWGG 3 cut(s) 319, 825, 942
Esp3I CGTCTC 1 cut(s) 373
FaqI GGGAC 3 cut(s) 952, 1324, 1450
FauI CCCGC 1 cut(s) 224
Fnu4HI GCNGC 6 cut(s) 302, 415, 848, 1075, 1110, 1113
FokI GGATG 2 cut(s) 394, 845
FriOI GRGCYC 1 cut(s) 352
Fsp4HI GCNGC 6 cut(s) 302, 415, 848, 1075, 1110, 1113
FspBI CTAG 1 cut(s) 1472
GlaI GCGC 1 cut(s) 371
GluI GCNGC 6 cut(s) 302, 415, 848, 1075, 1110, 1113
GsaI CCCAGC 3 cut(s) 570, 939, 1109
HaeIII GGCC 6 cut(s) 711, 1205, 1367, 1443, 1486, 1505
HapII CCGG 3 cut(s) 221, 309, 1351
HgaI GACGC 1 cut(s) 390
HhaI GCGC 1 cut(s) 372
Hin6I GCGC 1 cut(s) 370
HinP1I GCGC 1 cut(s) 370
HincII GTYRAC 2 cut(s) 522, 912
HindII GTYRAC 2 cut(s) 522, 912
HindIII AAGCTT 1 cut(s) 470
HinfI GANTC 4 cut(s) 87, 599, 1043, 1133
HpaI GTTAAC 1 cut(s) 912
HpaII CCGG 3 cut(s) 221, 309, 1351
HphI GGTGA 7 cut(s) 256, 506, 571, 739, 1204, 1421, 1454
Hpy166II GTNNAC 5 cut(s) 497, 522, 912, 1195, 1423
Hpy188I TCNGA 5 cut(s) 423, 808, 1048, 1097, 1141
Hpy188III TCNNGA 2 cut(s) 58, 1214
Hpy8I GTNNAC 5 cut(s) 497, 522, 912, 1195, 1423
HpyAV CCTTC 7 cut(s) 111, 212, 428, 1311, 1331, 1427, 1516
HpyCH4III ACNGT 2 cut(s) 293, 1153
HpyCH4IV ACGT 4 cut(s) 439, 524, 752, 1167
HpyF10VI GCNNNNNNNGC 2 cut(s) 1030, 1488
HpyF3I CTNAG 4 cut(s) 931, 1094, 1221, 1369
HpySE526I ACGT 4 cut(s) 439, 524, 752, 1167
HspAI GCGC 1 cut(s) 370
KroI GCCGGC 1 cut(s) 308
KroNI GCCGGC 1 cut(s) 310
KspAI GTTAAC 1 cut(s) 912
Kzo9I GATC 5 cut(s) 212, 701, 768, 1216, 1353
LguI GCTCTTC 2 cut(s) 38, 809
LmnI GCTCC 1 cut(s) 355
Lsp1109I GCAGC 4 cut(s) 288, 834, 1061, 1121
LweI GCATC 2 cut(s) 888, 1086
MaeI CTAG 1 cut(s) 1472
MaeII ACGT 4 cut(s) 439, 524, 752, 1167
MaeIII GTNAC 2 cut(s) 277, 456
MalI GATC 5 cut(s) 214, 703, 770, 1218, 1355
MboI GATC 5 cut(s) 212, 701, 768, 1216, 1353
MboII GAAGA 9 cut(s) 25, 583, 599, 754, 785, 826, 1112, 1289, 1413
MfeI CAATTG 1 cut(s) 647
MflI RGATCY 1 cut(s) 212
MhlI GDGCHC 1 cut(s) 352
MluCI AATT 9 cut(s) 206, 462, 627, 647, 731, 1005, 1017, 1035, 1244
MlyI GAGTC 3 cut(s) 81, 608, 1142
MroNI GCCGGC 1 cut(s) 308
MseI TTAA 4 cut(s) 141, 543, 911, 1248
MspA1I CMGCKG 2 cut(s) 935, 1074
MspI CCGG 3 cut(s) 221, 309, 1351
MspR9I CCNGG 3 cut(s) 221, 346, 1332
MunI CAATTG 1 cut(s) 647
Mva1269I GAATGC 1 cut(s) 263
MvaI CCWGG 2 cut(s) 346, 1332
MwoI GCNNNNNNNGC 2 cut(s) 1030, 1488
NaeI GCCGGC 1 cut(s) 310
NciI CCSGG 1 cut(s) 221
NcoI CCATGG 2 cut(s) 825, 942
NdeII GATC 5 cut(s) 212, 701, 768, 1216, 1353
NgoMIV GCCGGC 1 cut(s) 308
NheI GCTAGC 1 cut(s) 1471
NlaIV GGNNCC 4 cut(s) 214, 351, 940, 1262
NmuCI GTSAC 2 cut(s) 277, 456
NspI RCATGY 1 cut(s) 910
PagI TCATGA 1 cut(s) 1213
PciI ACATGT 1 cut(s) 906
PciSI GCTCTTC 2 cut(s) 38, 809
PctI GAATGC 1 cut(s) 263
PdiI GCCGGC 1 cut(s) 310
PfeI GAWTC 1 cut(s) 1043
PflMI CCANNNNNTGG 1 cut(s) 948
PkrI GCNGC 6 cut(s) 303, 416, 849, 1076, 1111, 1114
PleI GAGTC 3 cut(s) 81, 607, 1141
PpsI GAGTC 3 cut(s) 81, 607, 1141
Ppu21I YACGTR 1 cut(s) 440
PscI ACATGT 1 cut(s) 906
Psp1406I AACGTT 2 cut(s) 524, 1167
Psp6I CCWGG 2 cut(s) 344, 1330
PspFI CCCAGC 3 cut(s) 566, 935, 1105
PspGI CCWGG 2 cut(s) 344, 1330
PspN4I GGNNCC 4 cut(s) 214, 351, 940, 1262
PspPI GGNCC 3 cut(s) 188, 939, 1203
PstI CTGCAG 1 cut(s) 250
PsuI RGATCY 1 cut(s) 212
PvuII CAGCTG 1 cut(s) 935
RsaI GTAC 3 cut(s) 695, 1103, 1298
RsaNI GTAC 3 cut(s) 694, 1102, 1297
SapI GCTCTTC 2 cut(s) 38, 809
SaqAI TTAA 4 cut(s) 141, 543, 911, 1248
SatI GCNGC 6 cut(s) 302, 415, 848, 1075, 1110, 1113
Sau3AI GATC 5 cut(s) 212, 701, 768, 1216, 1353
Sau96I GGNCC 3 cut(s) 188, 939, 1203
ScaI AGTACT 1 cut(s) 695
SchI GAGTC 3 cut(s) 81, 608, 1142
ScrFI CCNGG 3 cut(s) 221, 346, 1332
SduI GDGCHC 1 cut(s) 352
SfaNI GCATC 2 cut(s) 888, 1086
SfcI CTRYAG 1 cut(s) 246
SinI GGWCC 2 cut(s) 188, 939
SmlI CTYRAG 4 cut(s) 56, 376, 395, 713
SmoI CTYRAG 4 cut(s) 56, 376, 395, 713
Sse9I AATT 9 cut(s) 206, 462, 627, 647, 731, 1005, 1017, 1035, 1244
SsiI CCGC 5 cut(s) 217, 415, 502, 1072, 1113
SspI AATATT 3 cut(s) 667, 764, 869
SspMI CTAG 1 cut(s) 1472
StyD4I CCNGG 3 cut(s) 219, 344, 1330
StyI CCWWGG 3 cut(s) 319, 825, 942
TaaI ACNGT 2 cut(s) 293, 1153
TaiI ACGT 4 cut(s) 442, 527, 755, 1170
TaqI TCGA 3 cut(s) 478, 531, 771
TasI AATT 9 cut(s) 206, 462, 627, 647, 731, 1005, 1017, 1035, 1244
TatI WGTACW 2 cut(s) 693, 1296
TauI GCSGC 2 cut(s) 417, 1115
TfiI GAWTC 1 cut(s) 1043
Tru1I TTAA 4 cut(s) 141, 543, 911, 1248
Tru9I TTAA 4 cut(s) 141, 543, 911, 1248
TscAI CASTG 2 cut(s) 371, 1391
TseFI GTSAC 2 cut(s) 277, 456
TseI GCWGC 4 cut(s) 301, 847, 1074, 1109
Tsp45I GTSAC 2 cut(s) 277, 456
TspDTI ATGAA 8 cut(s) 25, 462, 530, 745, 894, 1282, 1442, 1446
TspRI CASTG 2 cut(s) 371, 1391
Van91I CCANNNNNTGG 1 cut(s) 948
VpaK11BI GGWCC 2 cut(s) 188, 939
XagI CCTNNNNNAGG 2 cut(s) 989, 1335
XceI RCATGY 1 cut(s) 910
XspI CTAG 1 cut(s) 1472
ZrmI AGTACT 1 cut(s) 695
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.