Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000171

Orthogroup ID

OG0001098

Physical Location & Seq

Genomic Coordinates Reverse (-)

84564 .. 87164

Gene Structure 2601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_171G00441460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGGGATCCTTCTTGTTCATCCCTGCTGTTTTCTTATTCTTTGTTGCTGTCTCTGGTATTTCTTTCACAGAGTTTATATACCCGCCTTTCTCTGCTTCACACTATCAATTCATTGACAACGCTGGTACCTTCTTGTCTTCTCGAAATGGGACATTCAGAGCTGCTCTGTTTAATCCTGATGCTCAGTCCAACTTCTACTTGAGCATCATCCATGTGGCATCCAATACCGTCATCTGGTCTGCCAATCGCGATGCTGCCATCTCTAGTTCTGGTGAGATGAATCTCACGGTTAAAGGACTTAGCATTTCAGATGCGGATGGCAATCCCGTTTGGTCAACTCCACCATTGAAGTCATCAGTGTATGCATTATTGCTGAATGAAGTAGGGAATCTAATCCTTCTTGATCAATTCAATGGTTCTCTTTGGGAAAGTTTTCACTACCCCACAGACACGGTTGTTATTGGACAAGAGTTATCAGTCGGGTCCATTCTGGCCAGTTCCAGTGGCGCAACAAACTTTTCAACCGGTGATTACAAGCTCGTACTAAGTTCTTCTGATGTGATACTTCAATGGCATGGGCAGACATATTGGAAGTTGTCAATGGATACACGGGCTTATAAAAACTCAAATTACGTAGCTGAATATATGGCTATCAACAGAACAGGTCTTCAGCTTCTTGGTCTTAATGGAACAATGGTCGTGATTCAGGTGCTCTTGACACCTTCTGACTTTCAAATCGCTCAGTTGGATCCCTCAGGAAAGTTTATTGTCAAAAGCTTTTCTGGTTCACAATGGAACCAGGAATTTGTGGGGCCAATTGATGGTTGTAGAATTCCGTTCTTTTGTGGCAGAATTGGTTTGTGTACAGGCTCTGCATCCACTAACCCTACATGTTCATCATGTCCATCAACTTTCCATGTAAGTTCCCAAGATAATGGTGGTTGCCTGCCAAATAGTCCTTATTCTCCGCCATTACCCTGTAACTCAACCAATAACGGCAGTCAGCTGAATTCATCAGCCGTTTCATATATCAAGCTTGGCAACGGTATGGATTACTTTTCCATTCTTTTTTCCAAGCCTGTAAAATACGGTGTTACTCTGTCCATCTGTCAAGAACTCTGCTCTAGCAACTGCTCTTGCTTGGGAGTTTTCTATCAAAATTCGTCTGGTTCTTGCTATTTGCTTGAAGAGGAGTTGGGGTCCATTATTTCAAATAGTAATGCTGATGTAAATGATCCATTGGGTTACATCAAAGCCCTTGCCCCAACAGACTCTACTAACAGTAACAATCCCAGTTCTGGAAAAGGAAACTTTCCTGTAGCGGCTCTGGTGCTTTTGCCATTTACTGGGTTCTTTCTGTTGGCAGCTCTAGGTTTTCTTCTGCACGGAAGACGGAGACGGTCAAAGGAAAAAGAGATAAAATTAGGGAGTTTCGACTCACGTTCTTCAGGAGATATGGATGGCTTCTACATCCCAGGATTACCTAAGAGACTGCAAAGCCATAATCTGAATGACAGTAGCAGCGGTGGTGGTCAGTCGTCATCGTCATCTGGGTCAGGACCTGTTTATTTTCCATTGTTTGCACTAGAGATGCATGAGCAAGGGAGGTACTTGGAACTAGTTGATCCAAGACTGGAAGGACGGGTGACAAGTGAAGAGGTGGAGAAATTTGTGCGTGTTGCATTATGTTGTGTTCAAGAGGAACCAGCACTCAGGCCAAATATGAATACTATTGTTGGCATGCTGGAAGGTGGCATCCCTTTAAGCCAGCCAAATTTTGATTCGTTGAATTTCTTGCGCTTTATTGGACGTCGATTCACTGAGGCGTCTATGATAGAAGAGGGAACTGAGAGAAATGATAGAGTGCTGTATCAAGAGTCAAATTCTTTTCCTACGCGGACAACAATTGGCTCGCATACTTGCTTTTCTTATGTCTCTTCACAGGAGGTTTCAGGCCCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_1 Pkinase S_locus_glycop Transgly

Protein Analysis

654

Amino Acids

71.0

Weight (kDa)

5.33

Isoelectric Point (pI)

46.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	76 - 160	8.8e-13	D-mannose binding lectin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001098)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35370
fragaria_vesca	FvH4_2g26490 FvH4_5g31680 FvH4_5g31690
prunus_persica	Prupe.1G502100_v2.0.a1 Prupe.1G502100_v2.0.a1 Prupe.1G502100_v2.0.a1 Prupe.1G502100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0342661 RchiOBHm_Chr6g0295271 RchiOBHm_Chr7g0227271 RchiOBHm_Chr7g0227451 RchiOBHm_Chr7g0227561 RchiOBHm_Chr7g0227571 RchiOBHm_Chr7g0241321
rosa_laevigata	RLG00000001125 RLG00000001126 RLG00000001636 RLG00000001637 RLG00000001645 RLG00000001654 RLG00000011815
rosa_multiflora	Rmu_co8232247.1_g000001 Rmu_sc0000173.1_g000006 Rmu_sc0001772.1_g000015 Rmu_sc0001772.1_g000016 Rmu_sc0007232.1_g000005 Rmu_sc0010768.1_g000001
rosa_roxburghii	Rroxscaffold_171G00441460 Rroxscaffold_3G00232050 Rroxscaffold_3G00232070 Rroxscaffold_3G00232220 Rroxscaffold_7G00172610
rosa_rugosa	Rorug06G0250000 Rorug07G0241600
rosa_samantha	Rh1CG034900 Rh1CG153700 Rh6AG363000 Rh6BG370900 Rh6CG377500 Rh6DG363700 Rh7AG393600 Rh7AG395100 Rh7AG395200 Rh7BG376500 Rh7BG376800 Rh7BG376900 Rh7BG401500 Rh7CG413800 Rh7CG413900 Rh7CG468700 Rh7DG389300 Rh7DG390900 Rh7DG391000
rosa_wichuraiana	Rw1G013700 Rw6G031670 Rw7G032820 Rw7G032860 Rw7G032870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	618
AatII	GACGTC	1 cut(s)	1813
Acc65I	GGTACC	1 cut(s)	125
AccB1I	GGYRCC	1 cut(s)	125
AccB7I	CCANNNNNTGG	2 cut(s)	821, 1346
AccII	CGCG	2 cut(s)	249, 1897
AciI	CCGC	6 cut(s)	83, 314, 968, 1322, 1524, 1897
AclWI	GGATC	5 cut(s)	13, 743, 756, 1229, 1619
AcoI	YGGCCR	1 cut(s)	492
AcsI	RAATTY	8 cut(s)	803, 831, 1009, 1159, 1667, 1774, 1789, 1882
AcuI	CTGAAG	2 cut(s)	653, 1431
AcyI	GRCGYC	2 cut(s)	1810, 1826
AfaI	GTAC	4 cut(s)	127, 543, 865, 1610
AfiI	CCNNNNNNNGG	4 cut(s)	234, 821, 1298, 1346
AflIII	ACRYGT	1 cut(s)	890
AgeI	ACCGGT	1 cut(s)	524
AgsI	TTSAA	9 cut(s)	349, 412, 522, 569, 734, 1187, 1212, 1697, 1789
AhlI	ACTAGT	1 cut(s)	1618
AjnI	CCWGG	2 cut(s)	798, 1474
AjuI	GAANNNNNNNTTGG	2 cut(s)	1765, 1797
AluBI	AGCT	8 cut(s)	161, 538, 638, 673, 777, 1006, 1036, 1367
AluI	AGCT	8 cut(s)	161, 538, 638, 673, 777, 1006, 1036, 1367
Alw21I	GWGCWC	1 cut(s)	714
Alw26I	GTCTC	4 cut(s)	55, 1390, 1483, 1939
AlwI	GGATC	5 cut(s)	13, 743, 756, 1229, 1619
AlwNI	CAGNNNCTG	2 cut(s)	872, 1562
AoxI	GGCC	4 cut(s)	492, 812, 1715, 1954
ApeKI	GCWGC	4 cut(s)	161, 254, 1364, 1521
ApoI	RAATTY	8 cut(s)	803, 831, 1009, 1159, 1667, 1774, 1789, 1882
AsiGI	ACCGGT	1 cut(s)	524
Asp700I	GAANNNNTTC	1 cut(s)	432
Asp718I	GGTACC	1 cut(s)	125
AspLEI	GCGC	2 cut(s)	509, 1800
AspS9I	GGNCC	5 cut(s)	483, 812, 1200, 1559, 1955
AsuHPI	GGTGA	3 cut(s)	284, 539, 1657
AvaII	GGWCC	3 cut(s)	483, 1200, 1559
AxyI	CCTNAGG	1 cut(s)	754
BaeI	ACNNNNGTAYC	2 cut(s)	109, 142
BalI	TGGCCA	1 cut(s)	494
BamHI	GGATCC	2 cut(s)	5, 748
BanI	GGYRCC	1 cut(s)	125
BbsI	GAAGAC	3 cut(s)	129, 659, 1396
Bbv12I	GWGCWC	1 cut(s)	714
BbvI	GCAGC	4 cut(s)	148, 241, 1376, 1533
BccI	CCATC	6 cut(s)	266, 311, 815, 913, 1112, 1454
BceAI	ACGGC	2 cut(s)	1004, 1012
BciT130I	CCWGG	2 cut(s)	800, 1476
BciVI	GTATCC	1 cut(s)	598
BclI	TGATCA	1 cut(s)	403
BcoDI	GTCTC	4 cut(s)	55, 1390, 1483, 1939
BcuI	ACTAGT	1 cut(s)	1618
BfaI	CTAG	5 cut(s)	264, 1125, 1370, 1586, 1619
BfmI	CTRYAG	1 cut(s)	1317
BfuI	GTATCC	1 cut(s)	598
BisI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 1522
BlsI	GCNGC	5 cut(s)	163, 256, 1324, 1366, 1523
Bme1390I	CCNGG	2 cut(s)	800, 1476
Bme18I	GGWCC	3 cut(s)	483, 1200, 1559
BmgT120I	GGNCC	5 cut(s)	483, 812, 1200, 1559, 1955
BmiI	GGNNCC	8 cut(s)	7, 127, 484, 750, 797, 813, 1201, 1704
BmrFI	CCNGG	2 cut(s)	800, 1476
BmrI	ACTGGG	2 cut(s)	1287, 1356
BmsI	GCATC	8 cut(s)	169, 213, 227, 241, 301, 884, 1581, 1764
BmuI	ACTGGG	2 cut(s)	1287, 1356
BpiI	GAAGAC	3 cut(s)	129, 659, 1396
BpuEI	CTTGAG	1 cut(s)	220
BsaAI	YACGTR	1 cut(s)	634
BsaBI	GATNNNNATC	1 cut(s)	321
BsaHI	GRCGYC	2 cut(s)	1810, 1826
BsaJI	CCNNGG	1 cut(s)	1474
BsaWI	WCCGGW	1 cut(s)	524
BsaXI	ACNNNNNCTCC	2 cut(s)	1184, 1214
Bsc4I	CCNNNNNNNGG	4 cut(s)	234, 821, 1298, 1346
Bse118I	RCCGGY	1 cut(s)	524
Bse1I	ACTGG	5 cut(s)	495, 501, 1293, 1351, 1638
Bse21I	CCTNAGG	1 cut(s)	754
Bse8I	GATNNNNATC	1 cut(s)	321
BseBI	CCWGG	2 cut(s)	800, 1476
BseDI	CCNNGG	1 cut(s)	1474
BseGI	GGATG	8 cut(s)	18, 207, 218, 322, 875, 1465, 1470, 1755
BseJI	GATNNNNATC	1 cut(s)	321
BseLI	CCNNNNNNNGG	4 cut(s)	234, 821, 1298, 1346
BseMII	CTCAG	6 cut(s)	197, 755, 768, 1726, 1812, 1839
BseNI	ACTGG	5 cut(s)	495, 501, 1293, 1351, 1638
BseRI	GAGGAG	1 cut(s)	1205
BseXI	GCAGC	4 cut(s)	148, 241, 1376, 1533
BsgI	GTGCAG	1 cut(s)	1367
Bsh1236I	CGCG	2 cut(s)	249, 1897
BshFI	GGCC	4 cut(s)	494, 814, 1717, 1956
BshNI	GGYRCC	1 cut(s)	125
BshTI	ACCGGT	1 cut(s)	524
BsiHKAI	GWGCWC	1 cut(s)	714
BsiSI	CCGG	1 cut(s)	525
BslFI	GGGAC	1 cut(s)	163
BslI	CCNNNNNNNGG	4 cut(s)	234, 821, 1298, 1346
BsmAI	GTCTC	4 cut(s)	55, 1390, 1483, 1939
BsmBI	CGTCTC	1 cut(s)	1390
BsmFI	GGGAC	1 cut(s)	163
BsnI	GGCC	4 cut(s)	494, 814, 1717, 1956
Bsp1286I	GDGCHC	1 cut(s)	714
Bsp1407I	TGTACA	1 cut(s)	863
Bsp143I	GATC	5 cut(s)	5, 403, 748, 1234, 1624
Bsp68I	TCGCGA	1 cut(s)	249
BspACI	CCGC	6 cut(s)	83, 314, 968, 1322, 1524, 1897
BspANI	GGCC	4 cut(s)	494, 814, 1717, 1956
BspCNI	CTCAG	6 cut(s)	196, 754, 767, 1725, 1813, 1840
BspFNI	CGCG	2 cut(s)	249, 1897
BspLI	GGNNCC	8 cut(s)	7, 127, 484, 750, 797, 813, 1201, 1704
BspPI	GGATC	5 cut(s)	13, 743, 756, 1229, 1619
BspT107I	GGYRCC	1 cut(s)	125
BsrFI	RCCGGY	1 cut(s)	524
BsrGI	TGTACA	1 cut(s)	863
BsrI	ACTGG	5 cut(s)	495, 501, 1293, 1351, 1638
BssAI	RCCGGY	1 cut(s)	524
BssECI	CCNNGG	1 cut(s)	1474
BssMI	GATC	5 cut(s)	5, 403, 748, 1234, 1624
BssNI	GRCGYC	2 cut(s)	1810, 1826
Bst2UI	CCWGG	2 cut(s)	800, 1476
Bst4CI	ACNGT	8 cut(s)	229, 289, 454, 1046, 1091, 1283, 1401, 1517
Bst6I	CTCTTC	4 cut(s)	1182, 1650, 1833, 1942
BstACI	GRCGYC	2 cut(s)	1810, 1826
BstAUI	TGTACA	1 cut(s)	863
BstBAI	YACGTR	1 cut(s)	634
BstC8I	GCNNGC	4 cut(s)	947, 1742, 1769, 1913
BstDEI	CTNAG	9 cut(s)	183, 299, 545, 741, 754, 1485, 1712, 1821, 1848
BstF5I	GGATG	8 cut(s)	18, 207, 218, 322, 875, 1465, 1470, 1755
BstFNI	CGCG	2 cut(s)	249, 1897
BstHHI	GCGC	2 cut(s)	509, 1800
BstKTI	GATC	5 cut(s)	8, 406, 751, 1237, 1627
BstMAI	GTCTC	4 cut(s)	55, 1390, 1483, 1939
BstMBI	GATC	5 cut(s)	5, 403, 748, 1234, 1624
BstNI	CCWGG	2 cut(s)	800, 1476
BstNSI	RCATGY	2 cut(s)	894, 1744
BstSCI	CCNGG	2 cut(s)	798, 1474
BstSFI	CTRYAG	1 cut(s)	1317
BstSNI	TACGTA	1 cut(s)	634
BstUI	CGCG	2 cut(s)	249, 1897
BstV1I	GCAGC	4 cut(s)	148, 241, 1376, 1533
BstV2I	GAAGAC	3 cut(s)	129, 659, 1396
BstX2I	RGATCY	2 cut(s)	5, 748
BstXI	CCANNNNNNTGG	1 cut(s)	935
BstYI	RGATCY	2 cut(s)	5, 748
Bsu36I	CCTNAGG	1 cut(s)	754
BsuI	GTATCC	1 cut(s)	598
BsuRI	GGCC	4 cut(s)	494, 814, 1717, 1956
BtgZI	GCGATG	1 cut(s)	264
BtsCI	GGATG	8 cut(s)	18, 207, 218, 322, 875, 1465, 1470, 1755
BtsIMutI	CAGTG	3 cut(s)	363, 508, 1818
BtuMI	TCGCGA	1 cut(s)	249
Cac8I	GCNNGC	4 cut(s)	947, 1742, 1769, 1913
CaiI	CAGNNNCTG	2 cut(s)	872, 1562
CfoI	GCGC	2 cut(s)	509, 1800
Cfr10I	RCCGGY	1 cut(s)	524
Cfr13I	GGNCC	5 cut(s)	483, 812, 1200, 1559, 1955
CseI	GACGC	1 cut(s)	1815
Csp6I	GTAC	4 cut(s)	126, 542, 864, 1609
CspAI	ACCGGT	1 cut(s)	524
CviAII	CATG	7 cut(s)	212, 575, 891, 900, 917, 1595, 1741
CviQI	GTAC	4 cut(s)	126, 542, 864, 1609
DdeI	CTNAG	9 cut(s)	183, 299, 545, 741, 754, 1485, 1712, 1821, 1848
DpnI	GATC	5 cut(s)	7, 405, 750, 1236, 1626
DpnII	GATC	5 cut(s)	5, 403, 748, 1234, 1624
EaeI	YGGCCR	1 cut(s)	492
Eam1104I	CTCTTC	4 cut(s)	1182, 1650, 1833, 1942
EarI	CTCTTC	4 cut(s)	1182, 1650, 1833, 1942
EciI	GGCGGA	1 cut(s)	957
Eco105I	TACGTA	1 cut(s)	634
Eco47I	GGWCC	3 cut(s)	483, 1200, 1559
Eco57I	CTGAAG	2 cut(s)	653, 1431
Eco81I	CCTNAGG	1 cut(s)	754
EcoO109I	RGGNCCY	1 cut(s)	1559
EcoRI	GAATTC	2 cut(s)	831, 1009
EcoRII	CCWGG	2 cut(s)	798, 1474
EcoT22I	ATGCAT	2 cut(s)	367, 1596
Esp3I	CGTCTC	1 cut(s)	1390
FaeI	CATG	7 cut(s)	215, 578, 894, 903, 920, 1598, 1744
FaqI	GGGAC	1 cut(s)	163
FatI	CATG	7 cut(s)	211, 574, 890, 899, 916, 1594, 1740
FauI	CCCGC	1 cut(s)	90
FbaI	TGATCA	1 cut(s)	403
Fnu4HI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 1522
FokI	GGATG	8 cut(s)	5, 194, 205, 329, 862, 1457, 1472, 1742
Fsp4HI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 1522
FspBI	CTAG	5 cut(s)	264, 1125, 1370, 1586, 1619
GlaI	GCGC	2 cut(s)	508, 1799
GluI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 1522
HaeIII	GGCC	4 cut(s)	494, 814, 1717, 1956
HapII	CCGG	1 cut(s)	525
HgaI	GACGC	1 cut(s)	1815
HhaI	GCGC	2 cut(s)	509, 1800
Hin1I	GRCGYC	2 cut(s)	1810, 1826
Hin1II	CATG	7 cut(s)	215, 578, 894, 903, 920, 1598, 1744
Hin6I	GCGC	2 cut(s)	507, 1798
HinP1I	GCGC	2 cut(s)	507, 1798
HincII	GTYRAC	1 cut(s)	336
HindII	GTYRAC	1 cut(s)	336
HindIII	AAGCTT	2 cut(s)	775, 1034
HinfI	GANTC	8 cut(s)	280, 388, 703, 1271, 1436, 1781, 1815, 1877
HpaII	CCGG	1 cut(s)	525
HphI	GGTGA	3 cut(s)	284, 539, 1657
Hpy166II	GTNNAC	3 cut(s)	336, 788, 864
Hpy188I	TCNGA	5 cut(s)	158, 310, 556, 727, 1509
Hpy8I	GTNNAC	3 cut(s)	336, 788, 864
Hpy99I	CGWCG	1 cut(s)	1815
HpyAV	CCTTC	6 cut(s)	19, 139, 407, 732, 1631, 1742
HpyCH4III	ACNGT	8 cut(s)	229, 289, 454, 1046, 1091, 1283, 1401, 1517
HpyCH4IV	ACGT	3 cut(s)	633, 1441, 1810
HpyCH4V	TGCA	7 cut(s)	365, 875, 1384, 1495, 1583, 1594, 1682
HpyF3I	CTNAG	9 cut(s)	183, 299, 545, 741, 754, 1485, 1712, 1821, 1848
HpySE526I	ACGT	3 cut(s)	633, 1441, 1810
Hsp92I	GRCGYC	2 cut(s)	1810, 1826
Hsp92II	CATG	7 cut(s)	215, 578, 894, 903, 920, 1598, 1744
HspAI	GCGC	2 cut(s)	507, 1798
KpnI	GGTACC	1 cut(s)	129
Ksp22I	TGATCA	1 cut(s)	403
Kzo9I	GATC	5 cut(s)	5, 403, 748, 1234, 1624
Lsp1109I	GCAGC	4 cut(s)	148, 241, 1376, 1533
LweI	GCATC	8 cut(s)	169, 213, 227, 241, 301, 884, 1581, 1764
MaeI	CTAG	5 cut(s)	264, 1125, 1370, 1586, 1619
MaeII	ACGT	3 cut(s)	633, 1441, 1810
MaeIII	GTNAC	5 cut(s)	980, 1093, 1244, 1283, 1645
MalI	GATC	5 cut(s)	7, 405, 750, 1236, 1626
MboI	GATC	5 cut(s)	5, 403, 748, 1234, 1624
MfeI	CAATTG	2 cut(s)	816, 1905
MflI	RGATCY	2 cut(s)	5, 748
MhlI	GDGCHC	1 cut(s)	714
MlsI	TGGCCA	1 cut(s)	494
MluNI	TGGCCA	1 cut(s)	494
MlyI	GAGTC	3 cut(s)	1265, 1430, 1886
MmeI	TCCRAC	2 cut(s)	213, 726
MnlI	CCTC	8 cut(s)	763, 1183, 1599, 1651, 1693, 1816, 1834, 1939
Mox20I	TGGCCA	1 cut(s)	494
Mph1103I	ATGCAT	2 cut(s)	367, 1596
MroXI	GAANNNNTTC	1 cut(s)	432
MscI	TGGCCA	1 cut(s)	494
MseI	TTAA	4 cut(s)	171, 291, 684, 1763
MslI	CAYNNNNRTG	1 cut(s)	212
Msp20I	TGGCCA	1 cut(s)	494
MspA1I	CMGCKG	2 cut(s)	1006, 1524
MspI	CCGG	1 cut(s)	525
MspR9I	CCNGG	2 cut(s)	800, 1476
MunI	CAATTG	2 cut(s)	816, 1905
MvaI	CCWGG	2 cut(s)	800, 1476
MvnI	CGCG	2 cut(s)	249, 1897
NdeII	GATC	5 cut(s)	5, 403, 748, 1234, 1624
NlaIII	CATG	7 cut(s)	215, 578, 894, 903, 920, 1598, 1744
NlaIV	GGNNCC	8 cut(s)	7, 127, 484, 750, 797, 813, 1201, 1704
NmuCI	GTSAC	1 cut(s)	1645
NruI	TCGCGA	1 cut(s)	249
NsiI	ATGCAT	2 cut(s)	367, 1596
NspI	RCATGY	2 cut(s)	894, 1744
PaeI	GCATGC	1 cut(s)	1744
PciI	ACATGT	1 cut(s)	890
PdmI	GAANNNNTTC	1 cut(s)	432
PfeI	GAWTC	5 cut(s)	280, 388, 703, 1781, 1815
PflMI	CCANNNNNTGG	2 cut(s)	821, 1346
PinAI	ACCGGT	1 cut(s)	524
PkrI	GCNGC	5 cut(s)	163, 256, 1324, 1366, 1523
PleI	GAGTC	3 cut(s)	1265, 1430, 1885
PpsI	GAGTC	3 cut(s)	1265, 1430, 1885
Ppu21I	YACGTR	1 cut(s)	634
PpuMI	RGGWCCY	1 cut(s)	1559
PscI	ACATGT	1 cut(s)	890
PsiI	TTATAA	1 cut(s)	618
Psp5II	RGGWCCY	1 cut(s)	1559
Psp6I	CCWGG	2 cut(s)	798, 1474
PspGI	CCWGG	2 cut(s)	798, 1474
PspN4I	GGNNCC	8 cut(s)	7, 127, 484, 750, 797, 813, 1201, 1704
PspPI	GGNCC	5 cut(s)	483, 812, 1200, 1559, 1955
PspPPI	RGGWCCY	1 cut(s)	1559
PstNI	CAGNNNCTG	2 cut(s)	872, 1562
PsuI	RGATCY	2 cut(s)	5, 748
PvuII	CAGCTG	1 cut(s)	1006
RruI	TCGCGA	1 cut(s)	249
RsaI	GTAC	4 cut(s)	127, 543, 865, 1610
RsaNI	GTAC	4 cut(s)	126, 542, 864, 1609
RseI	CAYNNNNRTG	1 cut(s)	212
SaqAI	TTAA	4 cut(s)	171, 291, 684, 1763
SatI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 1522
Sau3AI	GATC	5 cut(s)	5, 403, 748, 1234, 1624
Sau96I	GGNCC	5 cut(s)	483, 812, 1200, 1559, 1955
SchI	GAGTC	3 cut(s)	1265, 1430, 1886
ScrFI	CCNGG	2 cut(s)	800, 1476
SduI	GDGCHC	1 cut(s)	714
SfaNI	GCATC	8 cut(s)	169, 213, 227, 241, 301, 884, 1581, 1764
SfcI	CTRYAG	1 cut(s)	1317
SinI	GGWCC	3 cut(s)	483, 1200, 1559
SmiMI	CAYNNNNRTG	1 cut(s)	212
SmlI	CTYRAG	1 cut(s)	199
SmoI	CTYRAG	1 cut(s)	199
SnaBI	TACGTA	1 cut(s)	634
SpeI	ACTAGT	1 cut(s)	1618
SphI	GCATGC	1 cut(s)	1744
SsiI	CCGC	6 cut(s)	83, 314, 968, 1322, 1524, 1897
SspMI	CTAG	5 cut(s)	264, 1125, 1370, 1586, 1619
StyD4I	CCNGG	2 cut(s)	798, 1474
TaaI	ACNGT	8 cut(s)	229, 289, 454, 1046, 1091, 1283, 1401, 1517
TaiI	ACGT	3 cut(s)	636, 1444, 1813
TaqI	TCGA	3 cut(s)	142, 1434, 1813
TatI	WGTACW	1 cut(s)	863
TauI	GCSGC	1 cut(s)	1325
TfiI	GAWTC	5 cut(s)	280, 388, 703, 1781, 1815
Tru1I	TTAA	4 cut(s)	171, 291, 684, 1763
Tru9I	TTAA	4 cut(s)	171, 291, 684, 1763
TscAI	CASTG	3 cut(s)	363, 508, 1825
TseFI	GTSAC	1 cut(s)	1645
TseI	GCWGC	4 cut(s)	161, 254, 1364, 1521
Tsp45I	GTSAC	1 cut(s)	1645
TspDTI	ATGAA	8 cut(s)	7, 100, 293, 393, 885, 1002, 1014, 1739
TspGWI	ACGGA	3 cut(s)	825, 1401, 1408
TspRI	CASTG	3 cut(s)	363, 508, 1825
Van91I	CCANNNNNTGG	2 cut(s)	821, 1346
VpaK11BI	GGWCC	3 cut(s)	483, 1200, 1559
XapI	RAATTY	8 cut(s)	803, 831, 1009, 1159, 1667, 1774, 1789, 1882
XceI	RCATGY	2 cut(s)	894, 1744
XcmI	CCANNNNNNNNNTGG	1 cut(s)	935
XmnI	GAANNNNTTC	1 cut(s)	432
XspI	CTAG	5 cut(s)	264, 1125, 1370, 1586, 1619
ZraI	GACGTC	1 cut(s)	1811
Zsp2I	ATGCAT	2 cut(s)	367, 1596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.