Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0001098

Physical Location & Seq

Genomic Coordinates Forward (+)

12811844 .. 12814443

Gene Structure 2600 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00172610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGGATCCTTCTTGTTCATCCCTGCTGTTTTCTTATTCTTTGTTGCTGTCTCTGGTATTTCTTTCACAGAGTTTATATACCCGCCTTTCTCTGCTTCACACTATCAATTCATTGACAACGCTGGTACCTTCTTGTCTTCTCGAAATGGGACATTCAGAGCTGCTCTGTTTAATCCTGATGCTCAGTCCAACTTCTACTTGAGCATCATCCATGTGGCATCCAATACCGTCATCTGGTCTGCCAATCGCGATGCTGCCATCTCTAGTTCTGGTGAGATGAATCTCACGGTTAAAGGACTTAGCATTTCAGATGCGGATGGCAATCCCGTTTGGTCAACTCCACCATTGAAGTCATCAGTGTATGCATTATTGCTGAATGAAGTAGGGAATCTAATCCTTCTTGATCAATTCAATGGTTCTCTTTGGGAAAGTTTTCACTACCCCACAGACACGGTTGTTATTGGACAAGAGTTATCAGTCGGGTCCATTCTGGCCAGTTCCAGTGGCGCAACAAACTTTTCAACCGGTGATTACAAGCTCGTACTAAGTTCTTCTGATGTGATACTTCAATGGCATGGGCAGACATATTGGAAGTTGTCAATGGATACACGGGCTTATAAAAACTCAAATTACGTAGCTGAATATATGGCTATCAACAGAACAGGTCTTCAGCTTCTTGGTCTTAATGGAACAATGGTCGTGATTCAGGTGCTCTTGACACCTTCTGACTTTCAAATCGCTCAGTTGGATCCCTCAGGAAAGTTTATTGTCAAAAGCTTTTCTGGTTCACAATGGAACCAGGAATTTGTGGGGCCAATTGATGGTTGTAGAATTCCGTTCTTTTGTGGCAGAATTGGTTTGTGTACAGGCTCTGCATCCACTAACCCTACATGTTCATCATGTCCATCAACTTTCCATGTAAGTTCCCAAGATAATGGTGGTTGCCTGCCAAATAGTCCTTATTCTCCGCCATTACCCTGTAACTCAACCAATAACGGCAGTCAGCTGAATTCATCAGCCGTTTCATATATCAAGCTTGGCAACGGTATGGATTACTTTTCCATTCTTTTTTCCAAGCCTGTAAAATACGGTGTTACTCTGTCCATCTGTCAAGAACTCTGCTCTAGCAACTGCTCTTGCTTGGGAGTTTTCTATCAAAATTCGTCTGGTTCTTGCTATTTGCTTGAAGAGGAGTTGGGGTCCATTATTTCAAATAGTAATGCTGATGTAAATGATCCATTGGGTTACATCAAAGCCCTTGCCCCAACAGACTCTACTAACAGTAACAATCCCAGTTCTGGAAAAGGAAACTTTCCTGTAGCGGCTCTGGTGCTTTTGCCATTTACTGGGTTCTTTCTGTTGGCAGCTCTAGGTTTTCTTCTGCACGGAAGACGGAGACGGTCAAAGGAAAAAGAGATAAAATTAGGGAGTTTCGACTCACGTTCTTCAGGAGATATGGATGGCTTCTACATCCCAGGATTACCTAAGAGGTTTGACTTTGAAGAACTTGAAGTGGCTACAGATAATTTTAAGACCCTGATTGGACTGCAAAGCCATAATCTGAATGACAGTAGCAGCGGTGGTGGTCAGTCGTCATCGTCATCTGGGTCAGGACCTGTTTATTTTCCATTGTTTGCACTAGAGATGCATGAGCAAGGGAGGTACTTGGAACTAGTTGATCCAAGACTGGAAGGACGGGTGACAAGTGAAGAGGTGGAGAAATTTGTGCGTGTTGCATTATGTTGTGTTCAAGAGGAACCAGCACTCAGGCCAAATATGAATACTATTGTTGGCATGCTGGAAGGTGGCATCCCTTTAAGCCAGCCAAATTTTGATTCGTTGAATTTCTTGCGCTTTATTGGACGTCGATTCACTGAGGCGTCTATGATAGAAGAGGGAACTGAGAGAAATGATAGAGTGCTGTATCAAGAGTCAAATTCTTTTCCTACGCGGACAACAATTGGCTCGCATACTTGCTTTTCTTATGTCTCTTCACAGGAGGTTTCAGGCCCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_1 Pkinase S_locus_glycop Transgly

Protein Analysis

672

Amino Acids

73.07

Weight (kDa)

5.1

Isoelectric Point (pI)

45.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	76 - 160	9.2e-13	D-mannose binding lectin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001098)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35370
fragaria_vesca	FvH4_2g26490 FvH4_5g31680 FvH4_5g31690
prunus_persica	Prupe.1G502100_v2.0.a1 Prupe.1G502100_v2.0.a1 Prupe.1G502100_v2.0.a1 Prupe.1G502100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0342661 RchiOBHm_Chr6g0295271 RchiOBHm_Chr7g0227271 RchiOBHm_Chr7g0227451 RchiOBHm_Chr7g0227561 RchiOBHm_Chr7g0227571 RchiOBHm_Chr7g0241321
rosa_laevigata	RLG00000001125 RLG00000001126 RLG00000001636 RLG00000001637 RLG00000001645 RLG00000001654 RLG00000011815
rosa_multiflora	Rmu_co8232247.1_g000001 Rmu_sc0000173.1_g000006 Rmu_sc0001772.1_g000015 Rmu_sc0001772.1_g000016 Rmu_sc0007232.1_g000005 Rmu_sc0010768.1_g000001
rosa_roxburghii	Rroxscaffold_171G00441460 Rroxscaffold_3G00232050 Rroxscaffold_3G00232070 Rroxscaffold_3G00232220 Rroxscaffold_7G00172610
rosa_rugosa	Rorug06G0250000 Rorug07G0241600
rosa_samantha	Rh1CG034900 Rh1CG153700 Rh6AG363000 Rh6BG370900 Rh6CG377500 Rh6DG363700 Rh7AG393600 Rh7AG395100 Rh7AG395200 Rh7BG376500 Rh7BG376800 Rh7BG376900 Rh7BG401500 Rh7CG413800 Rh7CG413900 Rh7CG468700 Rh7DG389300 Rh7DG390900 Rh7DG391000
rosa_wichuraiana	Rw1G013700 Rw6G031670 Rw7G032820 Rw7G032860 Rw7G032870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	618
AatII	GACGTC	1 cut(s)	1867
Acc65I	GGTACC	1 cut(s)	125
AccB1I	GGYRCC	1 cut(s)	125
AccB7I	CCANNNNNTGG	2 cut(s)	821, 1346
AccII	CGCG	2 cut(s)	249, 1951
AciI	CCGC	6 cut(s)	83, 314, 968, 1322, 1578, 1951
AclWI	GGATC	5 cut(s)	13, 743, 756, 1229, 1673
AcoI	YGGCCR	1 cut(s)	492
AcsI	RAATTY	8 cut(s)	803, 831, 1009, 1159, 1721, 1828, 1843, 1936
AcuI	CTGAAG	2 cut(s)	653, 1431
AcyI	GRCGYC	2 cut(s)	1864, 1880
AfaI	GTAC	4 cut(s)	127, 543, 865, 1664
AfiI	CCNNNNNNNGG	4 cut(s)	234, 821, 1298, 1346
AflIII	ACRYGT	1 cut(s)	890
AgeI	ACCGGT	1 cut(s)	524
AhlI	ACTAGT	1 cut(s)	1672
AjnI	CCWGG	2 cut(s)	798, 1474
AjuI	GAANNNNNNNTTGG	2 cut(s)	1819, 1851
AluBI	AGCT	8 cut(s)	161, 538, 638, 673, 777, 1006, 1036, 1367
AluI	AGCT	8 cut(s)	161, 538, 638, 673, 777, 1006, 1036, 1367
Alw21I	GWGCWC	1 cut(s)	714
Alw26I	GTCTC	3 cut(s)	55, 1390, 1993
AlwI	GGATC	5 cut(s)	13, 743, 756, 1229, 1673
AlwNI	CAGNNNCTG	2 cut(s)	872, 1616
AoxI	GGCC	4 cut(s)	492, 812, 1769, 2008
ApeKI	GCWGC	4 cut(s)	161, 254, 1364, 1575
ApoI	RAATTY	8 cut(s)	803, 831, 1009, 1159, 1721, 1828, 1843, 1936
AsiGI	ACCGGT	1 cut(s)	524
Asp700I	GAANNNNTTC	1 cut(s)	432
Asp718I	GGTACC	1 cut(s)	125
AspLEI	GCGC	2 cut(s)	509, 1854
AspS9I	GGNCC	5 cut(s)	483, 812, 1200, 1613, 2009
AsuHPI	GGTGA	3 cut(s)	284, 539, 1711
AvaII	GGWCC	3 cut(s)	483, 1200, 1613
AxyI	CCTNAGG	1 cut(s)	754
BaeI	ACNNNNGTAYC	2 cut(s)	109, 142
BalI	TGGCCA	1 cut(s)	494
BamHI	GGATCC	2 cut(s)	5, 748
BanI	GGYRCC	1 cut(s)	125
BbsI	GAAGAC	3 cut(s)	129, 659, 1396
Bbv12I	GWGCWC	1 cut(s)	714
BbvI	GCAGC	4 cut(s)	148, 241, 1376, 1587
BccI	CCATC	6 cut(s)	266, 311, 815, 913, 1112, 1454
BceAI	ACGGC	2 cut(s)	1004, 1012
BciT130I	CCWGG	2 cut(s)	800, 1476
BciVI	GTATCC	1 cut(s)	598
BclI	TGATCA	1 cut(s)	403
BcoDI	GTCTC	3 cut(s)	55, 1390, 1993
BcuI	ACTAGT	1 cut(s)	1672
BfaI	CTAG	5 cut(s)	264, 1125, 1370, 1640, 1673
BfmI	CTRYAG	2 cut(s)	1317, 1518
BfuI	GTATCC	1 cut(s)	598
BisI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 1576
BlsI	GCNGC	5 cut(s)	163, 256, 1324, 1366, 1577
Bme1390I	CCNGG	2 cut(s)	800, 1476
Bme18I	GGWCC	3 cut(s)	483, 1200, 1613
BmgT120I	GGNCC	5 cut(s)	483, 812, 1200, 1613, 2009
BmiI	GGNNCC	8 cut(s)	7, 127, 484, 750, 797, 813, 1201, 1758
BmrFI	CCNGG	2 cut(s)	800, 1476
BmrI	ACTGGG	2 cut(s)	1287, 1356
BmsI	GCATC	8 cut(s)	169, 213, 227, 241, 301, 884, 1635, 1818
BmuI	ACTGGG	2 cut(s)	1287, 1356
BpiI	GAAGAC	3 cut(s)	129, 659, 1396
BpuEI	CTTGAG	1 cut(s)	220
BsaAI	YACGTR	1 cut(s)	634
BsaBI	GATNNNNATC	1 cut(s)	321
BsaHI	GRCGYC	2 cut(s)	1864, 1880
BsaJI	CCNNGG	1 cut(s)	1474
BsaWI	WCCGGW	1 cut(s)	524
BsaXI	ACNNNNNCTCC	2 cut(s)	1184, 1214
Bsc4I	CCNNNNNNNGG	4 cut(s)	234, 821, 1298, 1346
Bse118I	RCCGGY	1 cut(s)	524
Bse1I	ACTGG	5 cut(s)	495, 501, 1293, 1351, 1692
Bse21I	CCTNAGG	1 cut(s)	754
Bse8I	GATNNNNATC	1 cut(s)	321
BseBI	CCWGG	2 cut(s)	800, 1476
BseDI	CCNNGG	1 cut(s)	1474
BseGI	GGATG	8 cut(s)	18, 207, 218, 322, 875, 1465, 1470, 1809
BseJI	GATNNNNATC	1 cut(s)	321
BseLI	CCNNNNNNNGG	4 cut(s)	234, 821, 1298, 1346
BseMII	CTCAG	6 cut(s)	197, 755, 768, 1780, 1866, 1893
BseNI	ACTGG	5 cut(s)	495, 501, 1293, 1351, 1692
BseRI	GAGGAG	1 cut(s)	1205
BseXI	GCAGC	4 cut(s)	148, 241, 1376, 1587
BsgI	GTGCAG	1 cut(s)	1367
Bsh1236I	CGCG	2 cut(s)	249, 1951
BshFI	GGCC	4 cut(s)	494, 814, 1771, 2010
BshNI	GGYRCC	1 cut(s)	125
BshTI	ACCGGT	1 cut(s)	524
BsiHKAI	GWGCWC	1 cut(s)	714
BsiSI	CCGG	1 cut(s)	525
BslFI	GGGAC	1 cut(s)	163
BslI	CCNNNNNNNGG	4 cut(s)	234, 821, 1298, 1346
BsmAI	GTCTC	3 cut(s)	55, 1390, 1993
BsmBI	CGTCTC	1 cut(s)	1390
BsmFI	GGGAC	1 cut(s)	163
BsnI	GGCC	4 cut(s)	494, 814, 1771, 2010
Bsp1286I	GDGCHC	1 cut(s)	714
Bsp1407I	TGTACA	1 cut(s)	863
Bsp143I	GATC	5 cut(s)	5, 403, 748, 1234, 1678
Bsp68I	TCGCGA	1 cut(s)	249
BspACI	CCGC	6 cut(s)	83, 314, 968, 1322, 1578, 1951
BspANI	GGCC	4 cut(s)	494, 814, 1771, 2010
BspCNI	CTCAG	6 cut(s)	196, 754, 767, 1779, 1867, 1894
BspFNI	CGCG	2 cut(s)	249, 1951
BspLI	GGNNCC	8 cut(s)	7, 127, 484, 750, 797, 813, 1201, 1758
BspPI	GGATC	5 cut(s)	13, 743, 756, 1229, 1673
BspT107I	GGYRCC	1 cut(s)	125
BsrFI	RCCGGY	1 cut(s)	524
BsrGI	TGTACA	1 cut(s)	863
BsrI	ACTGG	5 cut(s)	495, 501, 1293, 1351, 1692
BssAI	RCCGGY	1 cut(s)	524
BssECI	CCNNGG	1 cut(s)	1474
BssMI	GATC	5 cut(s)	5, 403, 748, 1234, 1678
BssNI	GRCGYC	2 cut(s)	1864, 1880
Bst2UI	CCWGG	2 cut(s)	800, 1476
Bst4CI	ACNGT	8 cut(s)	229, 289, 454, 1046, 1091, 1283, 1401, 1571
Bst6I	CTCTTC	4 cut(s)	1182, 1704, 1887, 1996
BstACI	GRCGYC	2 cut(s)	1864, 1880
BstAUI	TGTACA	1 cut(s)	863
BstBAI	YACGTR	1 cut(s)	634
BstC8I	GCNNGC	4 cut(s)	947, 1796, 1823, 1967
BstDEI	CTNAG	9 cut(s)	183, 299, 545, 741, 754, 1485, 1766, 1875, 1902
BstF5I	GGATG	8 cut(s)	18, 207, 218, 322, 875, 1465, 1470, 1809
BstFNI	CGCG	2 cut(s)	249, 1951
BstHHI	GCGC	2 cut(s)	509, 1854
BstKTI	GATC	5 cut(s)	8, 406, 751, 1237, 1681
BstMAI	GTCTC	3 cut(s)	55, 1390, 1993
BstMBI	GATC	5 cut(s)	5, 403, 748, 1234, 1678
BstNI	CCWGG	2 cut(s)	800, 1476
BstNSI	RCATGY	2 cut(s)	894, 1798
BstSCI	CCNGG	2 cut(s)	798, 1474
BstSFI	CTRYAG	2 cut(s)	1317, 1518
BstSNI	TACGTA	1 cut(s)	634
BstUI	CGCG	2 cut(s)	249, 1951
BstV1I	GCAGC	4 cut(s)	148, 241, 1376, 1587
BstV2I	GAAGAC	3 cut(s)	129, 659, 1396
BstX2I	RGATCY	2 cut(s)	5, 748
BstXI	CCANNNNNNTGG	1 cut(s)	935
BstYI	RGATCY	2 cut(s)	5, 748
Bsu36I	CCTNAGG	1 cut(s)	754
BsuI	GTATCC	1 cut(s)	598
BsuRI	GGCC	4 cut(s)	494, 814, 1771, 2010
BtgZI	GCGATG	1 cut(s)	264
BtsCI	GGATG	8 cut(s)	18, 207, 218, 322, 875, 1465, 1470, 1809
BtsIMutI	CAGTG	3 cut(s)	363, 508, 1872
BtuMI	TCGCGA	1 cut(s)	249
Cac8I	GCNNGC	4 cut(s)	947, 1796, 1823, 1967
CaiI	CAGNNNCTG	2 cut(s)	872, 1616
CfoI	GCGC	2 cut(s)	509, 1854
Cfr10I	RCCGGY	1 cut(s)	524
Cfr13I	GGNCC	5 cut(s)	483, 812, 1200, 1613, 2009
CseI	GACGC	1 cut(s)	1869
Csp6I	GTAC	4 cut(s)	126, 542, 864, 1663
CspAI	ACCGGT	1 cut(s)	524
CviAII	CATG	7 cut(s)	212, 575, 891, 900, 917, 1649, 1795
CviQI	GTAC	4 cut(s)	126, 542, 864, 1663
DdeI	CTNAG	9 cut(s)	183, 299, 545, 741, 754, 1485, 1766, 1875, 1902
DpnI	GATC	5 cut(s)	7, 405, 750, 1236, 1680
DpnII	GATC	5 cut(s)	5, 403, 748, 1234, 1678
EaeI	YGGCCR	1 cut(s)	492
Eam1104I	CTCTTC	4 cut(s)	1182, 1704, 1887, 1996
EarI	CTCTTC	4 cut(s)	1182, 1704, 1887, 1996
EciI	GGCGGA	1 cut(s)	957
Eco105I	TACGTA	1 cut(s)	634
Eco47I	GGWCC	3 cut(s)	483, 1200, 1613
Eco57I	CTGAAG	2 cut(s)	653, 1431
Eco81I	CCTNAGG	1 cut(s)	754
EcoO109I	RGGNCCY	1 cut(s)	1613
EcoRI	GAATTC	2 cut(s)	831, 1009
EcoRII	CCWGG	2 cut(s)	798, 1474
EcoT22I	ATGCAT	2 cut(s)	367, 1650
Esp3I	CGTCTC	1 cut(s)	1390
FaeI	CATG	7 cut(s)	215, 578, 894, 903, 920, 1652, 1798
FaqI	GGGAC	1 cut(s)	163
FatI	CATG	7 cut(s)	211, 574, 890, 899, 916, 1648, 1794
FauI	CCCGC	1 cut(s)	90
FbaI	TGATCA	1 cut(s)	403
Fnu4HI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 1576
FokI	GGATG	8 cut(s)	5, 194, 205, 329, 862, 1457, 1472, 1796
Fsp4HI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 1576
FspBI	CTAG	5 cut(s)	264, 1125, 1370, 1640, 1673
GlaI	GCGC	2 cut(s)	508, 1853
GluI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 1576
HaeIII	GGCC	4 cut(s)	494, 814, 1771, 2010
HapII	CCGG	1 cut(s)	525
HgaI	GACGC	1 cut(s)	1869
HhaI	GCGC	2 cut(s)	509, 1854
Hin1I	GRCGYC	2 cut(s)	1864, 1880
Hin1II	CATG	7 cut(s)	215, 578, 894, 903, 920, 1652, 1798
Hin6I	GCGC	2 cut(s)	507, 1852
HinP1I	GCGC	2 cut(s)	507, 1852
HincII	GTYRAC	1 cut(s)	336
HindII	GTYRAC	1 cut(s)	336
HindIII	AAGCTT	2 cut(s)	775, 1034
HinfI	GANTC	8 cut(s)	280, 388, 703, 1271, 1436, 1835, 1869, 1931
HpaII	CCGG	1 cut(s)	525
HphI	GGTGA	3 cut(s)	284, 539, 1711
Hpy166II	GTNNAC	3 cut(s)	336, 788, 864
Hpy188I	TCNGA	5 cut(s)	158, 310, 556, 727, 1563
Hpy8I	GTNNAC	3 cut(s)	336, 788, 864
Hpy99I	CGWCG	1 cut(s)	1869
HpyAV	CCTTC	6 cut(s)	19, 139, 407, 732, 1685, 1796
HpyCH4III	ACNGT	8 cut(s)	229, 289, 454, 1046, 1091, 1283, 1401, 1571
HpyCH4IV	ACGT	3 cut(s)	633, 1441, 1864
HpyCH4V	TGCA	7 cut(s)	365, 875, 1384, 1549, 1637, 1648, 1736
HpyF3I	CTNAG	9 cut(s)	183, 299, 545, 741, 754, 1485, 1766, 1875, 1902
HpySE526I	ACGT	3 cut(s)	633, 1441, 1864
Hsp92I	GRCGYC	2 cut(s)	1864, 1880
Hsp92II	CATG	7 cut(s)	215, 578, 894, 903, 920, 1652, 1798
HspAI	GCGC	2 cut(s)	507, 1852
KpnI	GGTACC	1 cut(s)	129
Ksp22I	TGATCA	1 cut(s)	403
Kzo9I	GATC	5 cut(s)	5, 403, 748, 1234, 1678
Lsp1109I	GCAGC	4 cut(s)	148, 241, 1376, 1587
LweI	GCATC	8 cut(s)	169, 213, 227, 241, 301, 884, 1635, 1818
MaeI	CTAG	5 cut(s)	264, 1125, 1370, 1640, 1673
MaeII	ACGT	3 cut(s)	633, 1441, 1864
MaeIII	GTNAC	5 cut(s)	980, 1093, 1244, 1283, 1699
MalI	GATC	5 cut(s)	7, 405, 750, 1236, 1680
MboI	GATC	5 cut(s)	5, 403, 748, 1234, 1678
MfeI	CAATTG	2 cut(s)	816, 1959
MflI	RGATCY	2 cut(s)	5, 748
MhlI	GDGCHC	1 cut(s)	714
MlsI	TGGCCA	1 cut(s)	494
MluNI	TGGCCA	1 cut(s)	494
MlyI	GAGTC	3 cut(s)	1265, 1430, 1940
MmeI	TCCRAC	2 cut(s)	213, 726
MnlI	CCTC	9 cut(s)	763, 1183, 1482, 1653, 1705, 1747, 1870, 1888, 1993
Mox20I	TGGCCA	1 cut(s)	494
Mph1103I	ATGCAT	2 cut(s)	367, 1650
MroXI	GAANNNNTTC	1 cut(s)	432
MscI	TGGCCA	1 cut(s)	494
MseI	TTAA	5 cut(s)	171, 291, 684, 1530, 1817
MslI	CAYNNNNRTG	1 cut(s)	212
Msp20I	TGGCCA	1 cut(s)	494
MspA1I	CMGCKG	2 cut(s)	1006, 1578
MspI	CCGG	1 cut(s)	525
MspR9I	CCNGG	2 cut(s)	800, 1476
MunI	CAATTG	2 cut(s)	816, 1959
MvaI	CCWGG	2 cut(s)	800, 1476
MvnI	CGCG	2 cut(s)	249, 1951
NdeII	GATC	5 cut(s)	5, 403, 748, 1234, 1678
NlaIII	CATG	7 cut(s)	215, 578, 894, 903, 920, 1652, 1798
NlaIV	GGNNCC	8 cut(s)	7, 127, 484, 750, 797, 813, 1201, 1758
NmuCI	GTSAC	1 cut(s)	1699
NruI	TCGCGA	1 cut(s)	249
NsiI	ATGCAT	2 cut(s)	367, 1650
NspI	RCATGY	2 cut(s)	894, 1798
PaeI	GCATGC	1 cut(s)	1798
PciI	ACATGT	1 cut(s)	890
PdmI	GAANNNNTTC	1 cut(s)	432
PfeI	GAWTC	5 cut(s)	280, 388, 703, 1835, 1869
PflMI	CCANNNNNTGG	2 cut(s)	821, 1346
PinAI	ACCGGT	1 cut(s)	524
PkrI	GCNGC	5 cut(s)	163, 256, 1324, 1366, 1577
PleI	GAGTC	3 cut(s)	1265, 1430, 1939
PpsI	GAGTC	3 cut(s)	1265, 1430, 1939
Ppu21I	YACGTR	1 cut(s)	634
PpuMI	RGGWCCY	1 cut(s)	1613
PscI	ACATGT	1 cut(s)	890
PsiI	TTATAA	1 cut(s)	618
Psp5II	RGGWCCY	1 cut(s)	1613
Psp6I	CCWGG	2 cut(s)	798, 1474
PspGI	CCWGG	2 cut(s)	798, 1474
PspN4I	GGNNCC	8 cut(s)	7, 127, 484, 750, 797, 813, 1201, 1758
PspPI	GGNCC	5 cut(s)	483, 812, 1200, 1613, 2009
PspPPI	RGGWCCY	1 cut(s)	1613
PstNI	CAGNNNCTG	2 cut(s)	872, 1616
PsuI	RGATCY	2 cut(s)	5, 748
PvuII	CAGCTG	1 cut(s)	1006
RruI	TCGCGA	1 cut(s)	249
RsaI	GTAC	4 cut(s)	127, 543, 865, 1664
RsaNI	GTAC	4 cut(s)	126, 542, 864, 1663
RseI	CAYNNNNRTG	1 cut(s)	212
SaqAI	TTAA	5 cut(s)	171, 291, 684, 1530, 1817
SatI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 1576
Sau3AI	GATC	5 cut(s)	5, 403, 748, 1234, 1678
Sau96I	GGNCC	5 cut(s)	483, 812, 1200, 1613, 2009
SchI	GAGTC	3 cut(s)	1265, 1430, 1940
ScrFI	CCNGG	2 cut(s)	800, 1476
SduI	GDGCHC	1 cut(s)	714
SfaNI	GCATC	8 cut(s)	169, 213, 227, 241, 301, 884, 1635, 1818
SfcI	CTRYAG	2 cut(s)	1317, 1518
SinI	GGWCC	3 cut(s)	483, 1200, 1613
SmiMI	CAYNNNNRTG	1 cut(s)	212
SmlI	CTYRAG	1 cut(s)	199
SmoI	CTYRAG	1 cut(s)	199
SnaBI	TACGTA	1 cut(s)	634
SpeI	ACTAGT	1 cut(s)	1672
SphI	GCATGC	1 cut(s)	1798
SsiI	CCGC	6 cut(s)	83, 314, 968, 1322, 1578, 1951
SspMI	CTAG	5 cut(s)	264, 1125, 1370, 1640, 1673
StyD4I	CCNGG	2 cut(s)	798, 1474
TaaI	ACNGT	8 cut(s)	229, 289, 454, 1046, 1091, 1283, 1401, 1571
TaiI	ACGT	3 cut(s)	636, 1444, 1867
TaqI	TCGA	3 cut(s)	142, 1434, 1867
TatI	WGTACW	1 cut(s)	863
TauI	GCSGC	1 cut(s)	1325
TfiI	GAWTC	5 cut(s)	280, 388, 703, 1835, 1869
Tru1I	TTAA	5 cut(s)	171, 291, 684, 1530, 1817
Tru9I	TTAA	5 cut(s)	171, 291, 684, 1530, 1817
TscAI	CASTG	3 cut(s)	363, 508, 1879
TseFI	GTSAC	1 cut(s)	1699
TseI	GCWGC	4 cut(s)	161, 254, 1364, 1575
Tsp45I	GTSAC	1 cut(s)	1699
TspDTI	ATGAA	8 cut(s)	7, 100, 293, 393, 885, 1002, 1014, 1793
TspGWI	ACGGA	3 cut(s)	825, 1401, 1408
TspRI	CASTG	3 cut(s)	363, 508, 1879
Van91I	CCANNNNNTGG	2 cut(s)	821, 1346
VpaK11BI	GGWCC	3 cut(s)	483, 1200, 1613
XapI	RAATTY	8 cut(s)	803, 831, 1009, 1159, 1721, 1828, 1843, 1936
XceI	RCATGY	2 cut(s)	894, 1798
XcmI	CCANNNNNNNNNTGG	1 cut(s)	935
XmnI	GAANNNNTTC	1 cut(s)	432
XspI	CTAG	5 cut(s)	264, 1125, 1370, 1640, 1673
ZraI	GACGTC	1 cut(s)	1865
Zsp2I	ATGCAT	2 cut(s)	367, 1650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.