Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0001098

Physical Location & Seq

Genomic Coordinates Reverse (-)

56435626 .. 56438226

Gene Structure 2601 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG377500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2601 bp

ATGGGATCCTTCTTGTTCATCCCTGCTGTTTTCTTATTCTTTGTTGCTGTCTCTGGTATTTCTTTCACAGAGTTTATATACCCGCCTTTCTCTGCTTCACACTATCAATTCATTGACAACGCTGGTACCTTCTTGTCTTCTCGAAATGGGACATTCAGAGCTGCTATGTTTAATCCTGATGCTCAGTCCAACTTCTACTTGAGCATCATCCATGAGGTATCCAATACCGTCATCTGGTCTGCCAATCGCAATGCTGCCATCTCTAGTTCTGGTGAGATGAATCTCACGGTTAAAGGGCTTAGCATTTCAGATGCGGATGGCAATCCCGTTTGGTCAACTCCAGCATTGAAGTCATCAGTGTATGCATTATTGCTGAATGAAGTAGGGAATCTAATCCTTCTTGATCAATTCAATGGTTCTCTTTGGGAAAGTTTTCACTACCCAACAGACACGATTGTTATTGGACAAGAGTTATCAGTTGGGTCCATTCTGGCCAGTTCCAGTGGCGCAACAAACTTTTCAACCGGTGATTACAAGCTCGCACTAAGTTCTTCTGATGTGATACTTCAATGGCATGGGCAGACATATTGGAAGTTGTCAATGGATACACGGGCTTATAAAAACTCAAATTACGTAGCTGAATATATGGCTATCAACAGAACAGGTCTTCAGCTTCTTGGTCTTAATGGAACAATGGTCGTGATTCAGGTGCTCTTGACACCTTCTGACTTTCAAATCGCTCAGTTGGATCCCTCAGGAAAGTTTATTGTCAAAAGCTTTTCTGGTTCACAGTGGAACCAGGAATTTGTGGGGCCAATTGATGGTTGTAGAATTCCATTCTTTTGTGGCAGAATTGGTTTGTGTACAGGCTCTGCATCAACTAACCCTACATGTTCATCATGTCCATCAACTTTCCATGTAAGTTCCCAAGATAATGGTGGTTGCCTGCCCAATAGTCCTTATTCTCCGCCATTACCCTGTAACTCAACCAATAACGGCAGTCAGCTGAATTCATCAGCCGTTTCATATATCAAGCTTGGCAACGGTATGGATTACTTTTCCATTCTTTTTTCTGAGCCTGTAAAATACGGTGTTACTTTGTCCATCTGTCAAGAACTCTGCTCTAGCAACTGCTCTTGCTTGGGAGTTTTCTATCAAAATTCGTCTGGTTCTTGCTATTTGCTTGAAGATGAGTTGGGGTCCATTATTTCAAATAGTAATGCTGATGTAAATGATCCATTGGGTTACATCAAAGCCCTTGCCCCAACAGACACTAATAACAGTAACAATCCCAGTGCTGGAAAAAGAAACTTTCCTGTAGCGGCTCTGGTGCTTTTGCCATTTACTGGGTTCTCTCTGTTGGCAGCTCTAGGTTTTCTTCTGCACGGAAGACGGAGACGGGCAAAGGAAAAAGAGATAAAATTAGGGAGTTTCGACTCACGTTCTTCAGGAGATATGGATGGCTTCTACATCCCAGGATTACCTAAGAGGTTTGACTTTGAAGAACTTGAAGTGGCTACAGATAATTTTAAGACCCTGATTGGGTCTGGTGGGTTTGGTGCTGTCTATAAGGGAATTCTACGTGATAAAACTGTCGTAGCTGTAAAGAAGATAACAAATGTAGGAGTTCAAGGGAAAAAAGATTTCTGCGCTGAGATTGCAGTGATTGGTAATGTTCACCATGCCAATTTGGTTAAATTGAAAGGGTTTTGCGCCCAAGGCAGACGTCGCCTTTTGGTCTATGAATATATGAATCGTGGCTCGCTTGACCGGACACTTTTTGGTAGTGGACCAGTCATAGAATGGCAAGAGAGACTTGATATAGCTCTAGGGACAGCGCGTGGGCTCGCATACTTGCACGGTGGGTGTGATCAGAAGATTATCCATTGTGATGTAAAGCCAGAGAACATTCTCTTGCAGGATCATTTTCAGGCAAAGCTTTCAGATTTTGGCCTTTCAAAGCTTCTCAGTCCGGAACAATCCAGTCTATTTACAACTATGAGAGGCACTCGTGGCTATCTGGCACCAGAATGGCTAACTAACTCTGCAATCTCAGAAAAAACTGATGTCTATAGTTTTGGAATGGTACTTCTAGAACTTGTCAGTGGAAGGAAAAACACACTAAGACTGCAAAGCCATAATCTGAATGACAGTAGCAGCGGTGGTGGTCAGTCATCATCGTCATCTGGGTCAGGACCTGTTTATTTTCCATTGTTTGCACTAGAGATGCATGAGCAAGGGAGGTACTTGGAACTAGTTGATCTAAGACTGGAAGGACGGGTGACAAGTGAAGAGGTGGAGAAATTTGTGCGTGTTGCATTATGTTGTGTTCAAGAGGAACCAGCACTCAGGCCAAATATGAATACTGTTGTTGGCATGCTGGAAGGTGGCATCCCTTTGAGCCAGCCAAATTTTGATTCGTTGAATTTCTTGCGCTTTATTGGACGTCGATTCACTGAGGCGTCTATGATAGAAGAGGGAACTGAGAGAAATGATAGAGTGCTGTATCAAGAGTCAAATTCTTTTCCTACGCGGACAACAATTGGCTCGCATACTTGCTTTTCTTACGTCTCTTCACAGGAGGTTTCAGGCCCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_1 Pkinase S_locus_glycop Transgly

Protein Analysis

866

Amino Acids

94.54

Weight (kDa)

5.94

Isoelectric Point (pI)

42.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	76 - 160	1.1e-12	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	510 - 740	7.9e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	511 - 708	1e-48	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001098)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35370
fragaria_vesca	FvH4_2g26490 FvH4_5g31680 FvH4_5g31690
prunus_persica	Prupe.1G502100_v2.0.a1 Prupe.1G502100_v2.0.a1 Prupe.1G502100_v2.0.a1 Prupe.1G502100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0342661 RchiOBHm_Chr6g0295271 RchiOBHm_Chr7g0227271 RchiOBHm_Chr7g0227451 RchiOBHm_Chr7g0227561 RchiOBHm_Chr7g0227571 RchiOBHm_Chr7g0241321
rosa_laevigata	RLG00000001125 RLG00000001126 RLG00000001636 RLG00000001637 RLG00000001645 RLG00000001654 RLG00000011815
rosa_multiflora	Rmu_co8232247.1_g000001 Rmu_sc0000173.1_g000006 Rmu_sc0001772.1_g000015 Rmu_sc0001772.1_g000016 Rmu_sc0007232.1_g000005 Rmu_sc0010768.1_g000001
rosa_roxburghii	Rroxscaffold_171G00441460 Rroxscaffold_3G00232050 Rroxscaffold_3G00232070 Rroxscaffold_3G00232220 Rroxscaffold_7G00172610
rosa_rugosa	Rorug06G0250000 Rorug07G0241600
rosa_samantha	Rh1CG034900 Rh1CG153700 Rh6AG363000 Rh6BG370900 Rh6CG377500 Rh6DG363700 Rh7AG393600 Rh7AG395100 Rh7AG395200 Rh7BG376500 Rh7BG376800 Rh7BG376900 Rh7BG401500 Rh7CG413800 Rh7CG413900 Rh7CG468700 Rh7DG389300 Rh7DG390900 Rh7DG391000
rosa_wichuraiana	Rw1G013700 Rw6G031670 Rw7G032820 Rw7G032860 Rw7G032870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	618
AatII	GACGTC	2 cut(s)	1729, 2449
Acc65I	GGTACC	1 cut(s)	125
AccB1I	GGYRCC	2 cut(s)	125, 2023
AccB7I	CCANNNNNTGG	2 cut(s)	821, 1346
AccII	CGCG	2 cut(s)	1840, 2533
AccIII	TCCGGA	1 cut(s)	1972
AciI	CCGC	6 cut(s)	83, 314, 968, 1322, 2160, 2533
AclWI	GGATC	5 cut(s)	13, 743, 756, 1229, 1929
AcoI	YGGCCR	1 cut(s)	492
AcsI	RAATTY	9 cut(s)	803, 831, 1009, 1159, 1575, 2303, 2410, 2425, 2518
AcuI	CTGAAG	2 cut(s)	653, 1431
AcyI	GRCGYC	3 cut(s)	1726, 2446, 2462
AfaI	GTAC	4 cut(s)	127, 865, 2088, 2246
AfiI	CCNNNNNNNGG	5 cut(s)	234, 821, 1298, 1346, 1542
AflIII	ACRYGT	1 cut(s)	890
AgeI	ACCGGT	1 cut(s)	524
AhlI	ACTAGT	1 cut(s)	2254
AjnI	CCWGG	2 cut(s)	798, 1474
AjuI	GAANNNNNNNTTGG	2 cut(s)	2401, 2433
Alw21I	GWGCWC	1 cut(s)	714
Alw26I	GTCTC	4 cut(s)	55, 1390, 1807, 2575
AlwI	GGATC	5 cut(s)	13, 743, 756, 1229, 1929
AlwNI	CAGNNNCTG	2 cut(s)	872, 2198
Aor13HI	TCCGGA	1 cut(s)	1972
AoxI	GGCC	5 cut(s)	492, 812, 1951, 2351, 2590
ApeKI	GCWGC	4 cut(s)	161, 254, 1364, 2157
ApoI	RAATTY	9 cut(s)	803, 831, 1009, 1159, 1575, 2303, 2410, 2425, 2518
AsiGI	ACCGGT	1 cut(s)	524
Asp700I	GAANNNNTTC	1 cut(s)	432
Asp718I	GGTACC	1 cut(s)	125
AspLEI	GCGC	5 cut(s)	509, 1652, 1715, 1840, 2436
AspS9I	GGNCC	6 cut(s)	483, 812, 1200, 1790, 2195, 2591
AsuHPI	GGTGA	4 cut(s)	284, 539, 1670, 2293
AvaII	GGWCC	4 cut(s)	483, 1200, 1790, 2195
AxyI	CCTNAGG	1 cut(s)	754
BaeI	ACNNNNGTAYC	2 cut(s)	109, 142
BalI	TGGCCA	1 cut(s)	494
BamHI	GGATCC	2 cut(s)	5, 748
BanI	GGYRCC	2 cut(s)	125, 2023
BanII	GRGCYC	1 cut(s)	1848
BauI	CACGAG	1 cut(s)	2010
BbsI	GAAGAC	3 cut(s)	129, 659, 1396
Bbv12I	GWGCWC	1 cut(s)	714
BbvI	GCAGC	4 cut(s)	148, 241, 1376, 2169
BccI	CCATC	6 cut(s)	266, 311, 815, 913, 1112, 1454
BceAI	ACGGC	2 cut(s)	1004, 1012
BciT130I	CCWGG	2 cut(s)	800, 1476
BciVI	GTATCC	2 cut(s)	229, 598
BclI	TGATCA	2 cut(s)	403, 1870
BcoDI	GTCTC	4 cut(s)	55, 1390, 1807, 2575
BcuI	ACTAGT	1 cut(s)	2254
BfaI	CTAG	7 cut(s)	264, 1125, 1370, 1829, 2093, 2222, 2255
BfmI	CTRYAG	3 cut(s)	1317, 1518, 2071
BfuI	GTATCC	2 cut(s)	229, 598
BisI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 2158
BlpI	GCTNAGC	1 cut(s)	299
BlsI	GCNGC	5 cut(s)	163, 256, 1324, 1366, 2159
Bme1390I	CCNGG	2 cut(s)	800, 1476
Bme18I	GGWCC	4 cut(s)	483, 1200, 1790, 2195
BmgT120I	GGNCC	6 cut(s)	483, 812, 1200, 1790, 2195, 2591
BmiI	GGNNCC	9 cut(s)	7, 127, 484, 750, 797, 813, 1201, 2025, 2340
BmrFI	CCNGG	2 cut(s)	800, 1476
BmrI	ACTGGG	2 cut(s)	1287, 1356
BmsI	GCATC	6 cut(s)	169, 213, 301, 884, 2217, 2400
BmuI	ACTGGG	2 cut(s)	1287, 1356
BpiI	GAAGAC	3 cut(s)	129, 659, 1396
BplI	GAGNNNNNCTC	2 cut(s)	1993, 2025
BpmI	CTGGAG	1 cut(s)	324
Bpu1102I	GCTNAGC	1 cut(s)	299
BpuEI	CTTGAG	1 cut(s)	220
BsaAI	YACGTR	2 cut(s)	634, 1583
BsaBI	GATNNNNATC	1 cut(s)	321
BsaHI	GRCGYC	3 cut(s)	1726, 2446, 2462
BsaJI	CCNNGG	2 cut(s)	1474, 1717
BsaWI	WCCGGW	3 cut(s)	524, 1770, 1972
Bsc4I	CCNNNNNNNGG	5 cut(s)	234, 821, 1298, 1346, 1542
Bse118I	RCCGGY	1 cut(s)	524
Bse1I	ACTGG	7 cut(s)	495, 501, 1293, 1351, 1793, 1983, 2274
Bse21I	CCTNAGG	1 cut(s)	754
Bse3DI	GCAATG	1 cut(s)	256
Bse8I	GATNNNNATC	1 cut(s)	321
BseAI	TCCGGA	1 cut(s)	1972
BseBI	CCWGG	2 cut(s)	800, 1476
BseDI	CCNNGG	2 cut(s)	1474, 1717
BseGI	GGATG	6 cut(s)	18, 207, 322, 1465, 1470, 2391
BseJI	GATNNNNATC	1 cut(s)	321
BseLI	CCNNNNNNNGG	5 cut(s)	234, 821, 1298, 1346, 1542
BseMI	GCAATG	1 cut(s)	256
BseNI	ACTGG	7 cut(s)	495, 501, 1293, 1351, 1793, 1983, 2274
BseXI	GCAGC	4 cut(s)	148, 241, 1376, 2169
BsgI	GTGCAG	1 cut(s)	1367
Bsh1236I	CGCG	2 cut(s)	1840, 2533
BshFI	GGCC	5 cut(s)	494, 814, 1953, 2353, 2592
BshNI	GGYRCC	2 cut(s)	125, 2023
BshTI	ACCGGT	1 cut(s)	524
BsiHKAI	GWGCWC	1 cut(s)	714
BsiSI	CCGG	3 cut(s)	525, 1771, 1973
BslFI	GGGAC	2 cut(s)	163, 1846
BslI	CCNNNNNNNGG	5 cut(s)	234, 821, 1298, 1346, 1542
BsmAI	GTCTC	4 cut(s)	55, 1390, 1807, 2575
BsmBI	CGTCTC	2 cut(s)	1390, 2575
BsmFI	GGGAC	2 cut(s)	163, 1846
BsnI	GGCC	5 cut(s)	494, 814, 1953, 2353, 2592
Bsp1286I	GDGCHC	2 cut(s)	714, 1848
Bsp13I	TCCGGA	1 cut(s)	1972
Bsp1407I	TGTACA	1 cut(s)	863
Bsp143I	GATC	7 cut(s)	5, 403, 748, 1234, 1870, 1921, 2260
Bsp1720I	GCTNAGC	1 cut(s)	299
BspACI	CCGC	6 cut(s)	83, 314, 968, 1322, 2160, 2533
BspANI	GGCC	5 cut(s)	494, 814, 1953, 2353, 2592
BspEI	TCCGGA	1 cut(s)	1972
BspFNI	CGCG	2 cut(s)	1840, 2533
BspLI	GGNNCC	9 cut(s)	7, 127, 484, 750, 797, 813, 1201, 2025, 2340
BspPI	GGATC	5 cut(s)	13, 743, 756, 1229, 1929
BspT107I	GGYRCC	2 cut(s)	125, 2023
BsrDI	GCAATG	1 cut(s)	256
BsrFI	RCCGGY	1 cut(s)	524
BsrGI	TGTACA	1 cut(s)	863
BsrI	ACTGG	7 cut(s)	495, 501, 1293, 1351, 1793, 1983, 2274
BssAI	RCCGGY	1 cut(s)	524
BssECI	CCNNGG	2 cut(s)	1474, 1717
BssMI	GATC	7 cut(s)	5, 403, 748, 1234, 1870, 1921, 2260
BssNI	GRCGYC	3 cut(s)	1726, 2446, 2462
BssSI	CACGAG	1 cut(s)	2010
BssT1I	CCWWGG	1 cut(s)	1717
Bst2BI	CACGAG	1 cut(s)	2010
Bst2UI	CCWGG	2 cut(s)	800, 1476
Bst6I	CTCTTC	3 cut(s)	2286, 2469, 2578
BstACI	GRCGYC	3 cut(s)	1726, 2446, 2462
BstAUI	TGTACA	1 cut(s)	863
BstBAI	YACGTR	2 cut(s)	634, 1583
BstC8I	GCNNGC	7 cut(s)	540, 947, 1763, 1848, 2378, 2405, 2549
BstF5I	GGATG	6 cut(s)	18, 207, 322, 1465, 1470, 2391
BstFNI	CGCG	2 cut(s)	1840, 2533
BstHHI	GCGC	5 cut(s)	509, 1652, 1715, 1840, 2436
BstKTI	GATC	7 cut(s)	8, 406, 751, 1237, 1873, 1924, 2263
BstMAI	GTCTC	4 cut(s)	55, 1390, 1807, 2575
BstMBI	GATC	7 cut(s)	5, 403, 748, 1234, 1870, 1921, 2260
BstMWI	GCNNNNNNNGC	4 cut(s)	1658, 1719, 1728, 2013
BstNI	CCWGG	2 cut(s)	800, 1476
BstNSI	RCATGY	2 cut(s)	894, 2380
BstSCI	CCNGG	2 cut(s)	798, 1474
BstSFI	CTRYAG	3 cut(s)	1317, 1518, 2071
BstSNI	TACGTA	1 cut(s)	634
BstUI	CGCG	2 cut(s)	1840, 2533
BstV1I	GCAGC	4 cut(s)	148, 241, 1376, 2169
BstV2I	GAAGAC	3 cut(s)	129, 659, 1396
BstX2I	RGATCY	2 cut(s)	5, 748
BstXI	CCANNNNNNTGG	1 cut(s)	935
BstYI	RGATCY	2 cut(s)	5, 748
Bsu36I	CCTNAGG	1 cut(s)	754
BsuI	GTATCC	2 cut(s)	229, 598
BsuRI	GGCC	5 cut(s)	494, 814, 1953, 2353, 2592
BtsCI	GGATG	6 cut(s)	18, 207, 322, 1465, 1470, 2391
BtsI	GCAGTG	1 cut(s)	1668
BtsIMutI	CAGTG	7 cut(s)	363, 508, 797, 1300, 1668, 2110, 2454
Cac8I	GCNNGC	7 cut(s)	540, 947, 1763, 1848, 2378, 2405, 2549
CaiI	CAGNNNCTG	2 cut(s)	872, 2198
CfoI	GCGC	5 cut(s)	509, 1652, 1715, 1840, 2436
Cfr10I	RCCGGY	1 cut(s)	524
Cfr13I	GGNCC	6 cut(s)	483, 812, 1200, 1790, 2195, 2591
CseI	GACGC	1 cut(s)	2451
Csp6I	GTAC	4 cut(s)	126, 864, 2087, 2245
CspAI	ACCGGT	1 cut(s)	524
CviAII	CATG	8 cut(s)	212, 575, 891, 900, 917, 1682, 2231, 2377
CviQI	GTAC	4 cut(s)	126, 864, 2087, 2245
DpnI	GATC	7 cut(s)	7, 405, 750, 1236, 1872, 1923, 2262
DpnII	GATC	7 cut(s)	5, 403, 748, 1234, 1870, 1921, 2260
EaeI	YGGCCR	1 cut(s)	492
Eam1104I	CTCTTC	3 cut(s)	2286, 2469, 2578
EarI	CTCTTC	3 cut(s)	2286, 2469, 2578
EciI	GGCGGA	1 cut(s)	957
Eco105I	TACGTA	1 cut(s)	634
Eco130I	CCWWGG	1 cut(s)	1717
Eco24I	GRGCYC	1 cut(s)	1848
Eco47I	GGWCC	4 cut(s)	483, 1200, 1790, 2195
Eco57I	CTGAAG	2 cut(s)	653, 1431
Eco81I	CCTNAGG	1 cut(s)	754
EcoO109I	RGGNCCY	1 cut(s)	2195
EcoRI	GAATTC	3 cut(s)	831, 1009, 1575
EcoRII	CCWGG	2 cut(s)	798, 1474
EcoT14I	CCWWGG	1 cut(s)	1717
EcoT22I	ATGCAT	2 cut(s)	367, 2232
EcoT38I	GRGCYC	1 cut(s)	1848
ErhI	CCWWGG	1 cut(s)	1717
Esp3I	CGTCTC	2 cut(s)	1390, 2575
FaeI	CATG	8 cut(s)	215, 578, 894, 903, 920, 1685, 2234, 2380
FalI	AAGNNNNNCTT	2 cut(s)	1800, 1832
FaqI	GGGAC	2 cut(s)	163, 1846
FatI	CATG	8 cut(s)	211, 574, 890, 899, 916, 1681, 2230, 2376
FauI	CCCGC	1 cut(s)	90
FbaI	TGATCA	2 cut(s)	403, 1870
Fnu4HI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 2158
FokI	GGATG	6 cut(s)	5, 194, 329, 1457, 1472, 2378
FriOI	GRGCYC	1 cut(s)	1848
Fsp4HI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 2158
FspBI	CTAG	7 cut(s)	264, 1125, 1370, 1829, 2093, 2222, 2255
GlaI	GCGC	5 cut(s)	508, 1651, 1714, 1839, 2435
GluI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 2158
GsuI	CTGGAG	1 cut(s)	324
HaeIII	GGCC	5 cut(s)	494, 814, 1953, 2353, 2592
HapII	CCGG	3 cut(s)	525, 1771, 1973
HgaI	GACGC	1 cut(s)	2451
HhaI	GCGC	5 cut(s)	509, 1652, 1715, 1840, 2436
Hin1I	GRCGYC	3 cut(s)	1726, 2446, 2462
Hin1II	CATG	8 cut(s)	215, 578, 894, 903, 920, 1685, 2234, 2380
Hin6I	GCGC	5 cut(s)	507, 1650, 1713, 1838, 2434
HinP1I	GCGC	5 cut(s)	507, 1650, 1713, 1838, 2434
HincII	GTYRAC	1 cut(s)	336
HindII	GTYRAC	1 cut(s)	336
HindIII	AAGCTT	4 cut(s)	775, 1034, 1937, 1961
HinfI	GANTC	8 cut(s)	280, 388, 703, 1436, 1753, 2417, 2451, 2513
HpaII	CCGG	3 cut(s)	525, 1771, 1973
HphI	GGTGA	4 cut(s)	284, 539, 1670, 2293
Hpy166II	GTNNAC	5 cut(s)	336, 788, 864, 1678, 1790
Hpy188I	TCNGA	9 cut(s)	158, 310, 556, 727, 1075, 1875, 1945, 2056, 2145
Hpy8I	GTNNAC	5 cut(s)	336, 788, 864, 1678, 1790
Hpy99I	CGWCG	2 cut(s)	1731, 2451
HpyAV	CCTTC	7 cut(s)	19, 139, 407, 732, 2103, 2267, 2378
HpyCH4IV	ACGT	6 cut(s)	633, 1441, 1582, 1726, 2446, 2568
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1658, 1719, 1728, 2013
HpySE526I	ACGT	6 cut(s)	633, 1441, 1582, 1726, 2446, 2568
Hsp92I	GRCGYC	3 cut(s)	1726, 2446, 2462
Hsp92II	CATG	8 cut(s)	215, 578, 894, 903, 920, 1685, 2234, 2380
HspAI	GCGC	5 cut(s)	507, 1650, 1713, 1838, 2434
Kpn2I	TCCGGA	1 cut(s)	1972
KpnI	GGTACC	1 cut(s)	129
Ksp22I	TGATCA	2 cut(s)	403, 1870
Kzo9I	GATC	7 cut(s)	5, 403, 748, 1234, 1870, 1921, 2260
Lsp1109I	GCAGC	4 cut(s)	148, 241, 1376, 2169
LweI	GCATC	6 cut(s)	169, 213, 301, 884, 2217, 2400
MaeI	CTAG	7 cut(s)	264, 1125, 1370, 1829, 2093, 2222, 2255
MaeII	ACGT	6 cut(s)	633, 1441, 1582, 1726, 2446, 2568
MaeIII	GTNAC	5 cut(s)	980, 1093, 1244, 1283, 2281
MalI	GATC	7 cut(s)	7, 405, 750, 1236, 1872, 1923, 2262
MboI	GATC	7 cut(s)	5, 403, 748, 1234, 1870, 1921, 2260
MfeI	CAATTG	2 cut(s)	816, 2541
MflI	RGATCY	2 cut(s)	5, 748
MhlI	GDGCHC	2 cut(s)	714, 1848
MlsI	TGGCCA	1 cut(s)	494
MluNI	TGGCCA	1 cut(s)	494
MlyI	GAGTC	2 cut(s)	1430, 2522
MmeI	TCCRAC	2 cut(s)	213, 726
Mox20I	TGGCCA	1 cut(s)	494
Mph1103I	ATGCAT	2 cut(s)	367, 2232
MroI	TCCGGA	1 cut(s)	1972
MroXI	GAANNNNTTC	1 cut(s)	432
MscI	TGGCCA	1 cut(s)	494
MseI	TTAA	5 cut(s)	171, 291, 684, 1530, 1695
MslI	CAYNNNNRTG	2 cut(s)	1890, 2029
Msp20I	TGGCCA	1 cut(s)	494
MspA1I	CMGCKG	2 cut(s)	1006, 2160
MspI	CCGG	3 cut(s)	525, 1771, 1973
MspR9I	CCNGG	2 cut(s)	800, 1476
MunI	CAATTG	2 cut(s)	816, 2541
MvaI	CCWGG	2 cut(s)	800, 1476
MvnI	CGCG	2 cut(s)	1840, 2533
MwoI	GCNNNNNNNGC	4 cut(s)	1658, 1719, 1728, 2013
NdeII	GATC	7 cut(s)	5, 403, 748, 1234, 1870, 1921, 2260
NlaIII	CATG	8 cut(s)	215, 578, 894, 903, 920, 1685, 2234, 2380
NlaIV	GGNNCC	9 cut(s)	7, 127, 484, 750, 797, 813, 1201, 2025, 2340
NmuCI	GTSAC	1 cut(s)	2281
NsiI	ATGCAT	2 cut(s)	367, 2232
NspI	RCATGY	2 cut(s)	894, 2380
PaeI	GCATGC	1 cut(s)	2380
PciI	ACATGT	1 cut(s)	890
PdmI	GAANNNNTTC	1 cut(s)	432
PfeI	GAWTC	6 cut(s)	280, 388, 703, 1753, 2417, 2451
PflMI	CCANNNNNTGG	2 cut(s)	821, 1346
PinAI	ACCGGT	1 cut(s)	524
PkrI	GCNGC	5 cut(s)	163, 256, 1324, 1366, 2159
PleI	GAGTC	2 cut(s)	1430, 2521
PpsI	GAGTC	2 cut(s)	1430, 2521
Ppu21I	YACGTR	2 cut(s)	634, 1583
PpuMI	RGGWCCY	1 cut(s)	2195
PscI	ACATGT	1 cut(s)	890
PsiI	TTATAA	1 cut(s)	618
Psp5II	RGGWCCY	1 cut(s)	2195
Psp6I	CCWGG	2 cut(s)	798, 1474
PspGI	CCWGG	2 cut(s)	798, 1474
PspN4I	GGNNCC	9 cut(s)	7, 127, 484, 750, 797, 813, 1201, 2025, 2340
PspPI	GGNCC	6 cut(s)	483, 812, 1200, 1790, 2195, 2591
PspPPI	RGGWCCY	1 cut(s)	2195
PstNI	CAGNNNCTG	2 cut(s)	872, 2198
PsuI	RGATCY	2 cut(s)	5, 748
PvuII	CAGCTG	1 cut(s)	1006
RsaI	GTAC	4 cut(s)	127, 865, 2088, 2246
RsaNI	GTAC	4 cut(s)	126, 864, 2087, 2245
RseI	CAYNNNNRTG	2 cut(s)	1890, 2029
SaqAI	TTAA	5 cut(s)	171, 291, 684, 1530, 1695
SatI	GCNGC	5 cut(s)	162, 255, 1323, 1365, 2158
Sau3AI	GATC	7 cut(s)	5, 403, 748, 1234, 1870, 1921, 2260
Sau96I	GGNCC	6 cut(s)	483, 812, 1200, 1790, 2195, 2591
SchI	GAGTC	2 cut(s)	1430, 2522
ScrFI	CCNGG	2 cut(s)	800, 1476
SduI	GDGCHC	2 cut(s)	714, 1848
SfaNI	GCATC	6 cut(s)	169, 213, 301, 884, 2217, 2400
SfcI	CTRYAG	3 cut(s)	1317, 1518, 2071
SinI	GGWCC	4 cut(s)	483, 1200, 1790, 2195
SmiMI	CAYNNNNRTG	2 cut(s)	1890, 2029
SmlI	CTYRAG	1 cut(s)	199
SmoI	CTYRAG	1 cut(s)	199
SnaBI	TACGTA	1 cut(s)	634
SpeI	ACTAGT	1 cut(s)	2254
SphI	GCATGC	1 cut(s)	2380
SsiI	CCGC	6 cut(s)	83, 314, 968, 1322, 2160, 2533
SspMI	CTAG	7 cut(s)	264, 1125, 1370, 1829, 2093, 2222, 2255
StyD4I	CCNGG	2 cut(s)	798, 1474
StyI	CCWWGG	1 cut(s)	1717
TaiI	ACGT	6 cut(s)	636, 1444, 1585, 1729, 2449, 2571
TaqI	TCGA	3 cut(s)	142, 1434, 2449
TatI	WGTACW	1 cut(s)	863
TauI	GCSGC	1 cut(s)	1325
TfiI	GAWTC	6 cut(s)	280, 388, 703, 1753, 2417, 2451
Tru1I	TTAA	5 cut(s)	171, 291, 684, 1530, 1695
Tru9I	TTAA	5 cut(s)	171, 291, 684, 1530, 1695
TscAI	CASTG	7 cut(s)	363, 508, 797, 1300, 1668, 2110, 2461
TseFI	GTSAC	1 cut(s)	2281
TseI	GCWGC	4 cut(s)	161, 254, 1364, 2157
Tsp45I	GTSAC	1 cut(s)	2281
TspGWI	ACGGA	2 cut(s)	1401, 1408
TspRI	CASTG	7 cut(s)	363, 508, 797, 1300, 1668, 2110, 2461
Van91I	CCANNNNNTGG	2 cut(s)	821, 1346
VpaK11BI	GGWCC	4 cut(s)	483, 1200, 1790, 2195
XapI	RAATTY	9 cut(s)	803, 831, 1009, 1159, 1575, 2303, 2410, 2425, 2518
XbaI	TCTAGA	1 cut(s)	2092
XceI	RCATGY	2 cut(s)	894, 2380
XcmI	CCANNNNNNNNNTGG	2 cut(s)	935, 1800
XmnI	GAANNNNTTC	1 cut(s)	432
XspI	CTAG	7 cut(s)	264, 1125, 1370, 1829, 2093, 2222, 2255
ZraI	GACGTC	2 cut(s)	1727, 2447
Zsp2I	ATGCAT	2 cut(s)	367, 2232

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.