B3 domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G78635 AT1G78640 AT2G33720 |
| fragaria_vesca | FvH4_3g33791 FvH4_3g37630 |
| malus_domestica | MD14G1106900.v1.1 |
| prunus_persica | Prupe.5G092200_v2.0.a1 Prupe.5G102200_v2.0.a1 Prupe.5G102300_v2.0.a1 Prupe.5G102400_v2.0.a1 Prupe.5G102500_v2.0.a1 |
| pyrus_communis | pycom05g30850 pycom05g30870 pycom14g10060 |
| rosa_chinensis | RchiOBHm_Chr2g0116441 |
| rosa_laevigata | RLG00000003924 RLG00000018270 RLG00000035460 RLG00000035470 |
| rosa_multiflora | Rmu_sc0000338.1_g000013 Rmu_sc0000689.1_g000016 Rmu_sc0001164.1_g000007 Rmu_sc0004191.1_g000056 Rmu_sc0019528.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00019310 Rroxscaffold_1G00019370 Rroxscaffold_5G00379640 |
| rosa_rugosa | Rorug05G0141100 Rorug05G0339700 |
| rosa_samantha | Rh2AG262200 Rh2CG268400 Rh2CG268500 Rh2DG270400 Rh5AG402000 Rh5BG019500 Rh5BG414100 Rh5CG438600 Rh5DG428700 Rh7AG166100 Rh7BG168200 Rh7CG174500 Rh7DG167800 |
| rosa_wichuraiana | Rw5G037840 Rw7G014460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 193 |
| AciI | CCGC | 1 cut(s) | 226 |
| AclWI | GGATC | 1 cut(s) | 146 |
| AcoI | YGGCCR | 1 cut(s) | 335 |
| AfaI | GTAC | 1 cut(s) | 437 |
| AflIII | ACRYGT | 1 cut(s) | 217 |
| AgsI | TTSAA | 4 cut(s) | 39, 247, 328, 403 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 302, 334 |
| AluBI | AGCT | 4 cut(s) | 80, 243, 410, 416 |
| AluI | AGCT | 4 cut(s) | 80, 243, 410, 416 |
| Alw21I | GWGCWC | 1 cut(s) | 70 |
| Alw26I | GTCTC | 2 cut(s) | 420, 449 |
| Alw44I | GTGCAC | 1 cut(s) | 66 |
| AlwI | GGATC | 1 cut(s) | 146 |
| AoxI | GGCC | 1 cut(s) | 335 |
| ApaLI | GTGCAC | 1 cut(s) | 66 |
| AspS9I | GGNCC | 1 cut(s) | 256 |
| AsuHPI | GGTGA | 1 cut(s) | 274 |
| AvaII | GGWCC | 1 cut(s) | 256 |
| BaeGI | GKGCMC | 2 cut(s) | 70, 198 |
| BanI | GGYRCC | 1 cut(s) | 193 |
| BanII | GRGCYC | 1 cut(s) | 119 |
| BbsI | GAAGAC | 1 cut(s) | 316 |
| Bbv12I | GWGCWC | 1 cut(s) | 70 |
| BccI | CCATC | 1 cut(s) | 31 |
| BceAI | ACGGC | 1 cut(s) | 322 |
| BcoDI | GTCTC | 2 cut(s) | 420, 449 |
| BfaI | CTAG | 1 cut(s) | 101 |
| BmcAI | AGTACT | 1 cut(s) | 437 |
| Bme18I | GGWCC | 1 cut(s) | 256 |
| BmgT120I | GGNCC | 1 cut(s) | 256 |
| BmiI | GGNNCC | 3 cut(s) | 118, 195, 257 |
| BpiI | GAAGAC | 1 cut(s) | 316 |
| BpuEI | CTTGAG | 1 cut(s) | 431 |
| BsaI | GGTCTC | 1 cut(s) | 449 |
| BsaJI | CCNNGG | 2 cut(s) | 134, 169 |
| Bse1I | ACTGG | 2 cut(s) | 338, 374 |
| Bse3DI | GCAATG | 1 cut(s) | 274 |
| BseDI | CCNNGG | 2 cut(s) | 134, 169 |
| BseMI | GCAATG | 1 cut(s) | 274 |
| BseNI | ACTGG | 2 cut(s) | 338, 374 |
| BseSI | GKGCMC | 2 cut(s) | 70, 198 |
| BshFI | GGCC | 1 cut(s) | 337 |
| BshNI | GGYRCC | 1 cut(s) | 193 |
| BsiHKAI | GWGCWC | 1 cut(s) | 70 |
| BsmAI | GTCTC | 2 cut(s) | 420, 449 |
| BsmBI | CGTCTC | 1 cut(s) | 420 |
| BsnI | GGCC | 1 cut(s) | 337 |
| Bso31I | GGTCTC | 1 cut(s) | 449 |
| Bsp1286I | GDGCHC | 3 cut(s) | 70, 119, 198 |
| Bsp143I | GATC | 2 cut(s) | 97, 138 |
| BspACI | CCGC | 1 cut(s) | 226 |
| BspANI | GGCC | 1 cut(s) | 337 |
| BspHI | TCATGA | 1 cut(s) | 231 |
| BspLI | GGNNCC | 3 cut(s) | 118, 195, 257 |
| BspPI | GGATC | 1 cut(s) | 146 |
| BspQI | GCTCTTC | 1 cut(s) | 42 |
| BspT107I | GGYRCC | 1 cut(s) | 193 |
| BspTNI | GGTCTC | 1 cut(s) | 449 |
| BsrDI | GCAATG | 1 cut(s) | 274 |
| BsrI | ACTGG | 2 cut(s) | 338, 374 |
| BssECI | CCNNGG | 2 cut(s) | 134, 169 |
| BssMI | GATC | 2 cut(s) | 97, 138 |
| Bst4CI | ACNGT | 4 cut(s) | 160, 263, 286, 296 |
| Bst6I | CTCTTC | 1 cut(s) | 42 |
| BstC8I | GCNNGC | 2 cut(s) | 185, 363 |
| BstDEI | CTNAG | 1 cut(s) | 107 |
| BstDSI | CCRYGG | 1 cut(s) | 134 |
| BstKTI | GATC | 2 cut(s) | 100, 141 |
| BstMAI | GTCTC | 2 cut(s) | 420, 449 |
| BstMBI | GATC | 2 cut(s) | 97, 138 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 193 |
| BstNSI | RCATGY | 1 cut(s) | 221 |
| BstSLI | GKGCMC | 2 cut(s) | 70, 198 |
| BstV2I | GAAGAC | 1 cut(s) | 316 |
| BsuRI | GGCC | 1 cut(s) | 337 |
| BtgI | CCRYGG | 1 cut(s) | 134 |
| Cac8I | GCNNGC | 2 cut(s) | 185, 363 |
| CciI | TCATGA | 1 cut(s) | 231 |
| Cfr13I | GGNCC | 1 cut(s) | 256 |
| Csp6I | GTAC | 1 cut(s) | 436 |
| CviAII | CATG | 3 cut(s) | 218, 232, 314 |
| CviJI | RGCY | 9 cut(s) | 5, 80, 106, 117, 187, 243, 337, 410, 416 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 80, 106, 117, 187, 243, 337, 410, 416 |
| CviQI | GTAC | 1 cut(s) | 436 |
| DdeI | CTNAG | 1 cut(s) | 107 |
| DpnI | GATC | 2 cut(s) | 99, 140 |
| DpnII | GATC | 2 cut(s) | 97, 138 |
| EaeI | YGGCCR | 1 cut(s) | 335 |
| Eam1104I | CTCTTC | 1 cut(s) | 42 |
| EarI | CTCTTC | 1 cut(s) | 42 |
| Eco24I | GRGCYC | 1 cut(s) | 119 |
| Eco31I | GGTCTC | 1 cut(s) | 449 |
| Eco47I | GGWCC | 1 cut(s) | 256 |
| EcoT38I | GRGCYC | 1 cut(s) | 119 |
| Esp3I | CGTCTC | 1 cut(s) | 420 |
| FaeI | CATG | 3 cut(s) | 221, 235, 317 |
| FaiI | YATR | 3 cut(s) | 219, 233, 315 |
| FatI | CATG | 3 cut(s) | 217, 231, 313 |
| FriOI | GRGCYC | 1 cut(s) | 119 |
| FspBI | CTAG | 1 cut(s) | 101 |
| HaeIII | GGCC | 1 cut(s) | 337 |
| Hin1II | CATG | 3 cut(s) | 221, 235, 317 |
| HincII | GTYRAC | 1 cut(s) | 156 |
| HindII | GTYRAC | 1 cut(s) | 156 |
| HinfI | GANTC | 1 cut(s) | 202 |
| HphI | GGTGA | 1 cut(s) | 274 |
| Hpy166II | GTNNAC | 4 cut(s) | 68, 156, 259, 289 |
| Hpy188I | TCNGA | 1 cut(s) | 173 |
| Hpy188III | TCNNGA | 3 cut(s) | 95, 145, 232 |
| Hpy8I | GTNNAC | 4 cut(s) | 68, 156, 259, 289 |
| Hpy99I | CGWCG | 1 cut(s) | 343 |
| HpyAV | CCTTC | 2 cut(s) | 370, 397 |
| HpyCH4III | ACNGT | 4 cut(s) | 160, 263, 286, 296 |
| HpyCH4IV | ACGT | 1 cut(s) | 354 |
| HpyCH4V | TGCA | 2 cut(s) | 68, 361 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 193 |
| HpyF3I | CTNAG | 1 cut(s) | 107 |
| HpySE526I | ACGT | 1 cut(s) | 354 |
| Hsp92II | CATG | 3 cut(s) | 221, 235, 317 |
| Kzo9I | GATC | 2 cut(s) | 97, 138 |
| LguI | GCTCTTC | 1 cut(s) | 42 |
| LmnI | GCTCC | 1 cut(s) | 122 |
| LpnPI | CCDG | 8 cut(s) | 29, 76, 98, 169, 224, 319, 355, 406 |
| MaeI | CTAG | 1 cut(s) | 101 |
| MaeII | ACGT | 1 cut(s) | 354 |
| MaeIII | GTNAC | 3 cut(s) | 280, 296, 350 |
| MalI | GATC | 2 cut(s) | 99, 140 |
| MboI | GATC | 2 cut(s) | 97, 138 |
| MboII | GAAGA | 4 cut(s) | 59, 160, 316, 385 |
| MhlI | GDGCHC | 3 cut(s) | 70, 119, 198 |
| MluCI | AATT | 2 cut(s) | 176, 398 |
| MlyI | GAGTC | 1 cut(s) | 211 |
| MnlI | CCTC | 3 cut(s) | 83, 179, 387 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 193 |
| NdeII | GATC | 2 cut(s) | 97, 138 |
| NlaIII | CATG | 3 cut(s) | 221, 235, 317 |
| NlaIV | GGNNCC | 3 cut(s) | 118, 195, 257 |
| NmuCI | GTSAC | 2 cut(s) | 280, 296 |
| NspI | RCATGY | 1 cut(s) | 221 |
| PagI | TCATGA | 1 cut(s) | 231 |
| PciI | ACATGT | 1 cut(s) | 217 |
| PciSI | GCTCTTC | 1 cut(s) | 42 |
| PleI | GAGTC | 1 cut(s) | 210 |
| PpsI | GAGTC | 1 cut(s) | 210 |
| PscI | ACATGT | 1 cut(s) | 217 |
| PspN4I | GGNNCC | 3 cut(s) | 118, 195, 257 |
| PspPI | GGNCC | 1 cut(s) | 256 |
| RsaI | GTAC | 1 cut(s) | 437 |
| RsaNI | GTAC | 1 cut(s) | 436 |
| SapI | GCTCTTC | 1 cut(s) | 42 |
| Sau3AI | GATC | 2 cut(s) | 97, 138 |
| Sau96I | GGNCC | 1 cut(s) | 256 |
| ScaI | AGTACT | 1 cut(s) | 437 |
| SchI | GAGTC | 1 cut(s) | 211 |
| SduI | GDGCHC | 3 cut(s) | 70, 119, 198 |
| SetI | ASST | 8 cut(s) | 60, 82, 94, 171, 245, 357, 412, 418 |
| SinI | GGWCC | 1 cut(s) | 256 |
| SmlI | CTYRAG | 1 cut(s) | 446 |
| SmoI | CTYRAG | 1 cut(s) | 446 |
| Sse9I | AATT | 2 cut(s) | 176, 398 |
| SsiI | CCGC | 1 cut(s) | 226 |
| SspMI | CTAG | 1 cut(s) | 101 |
| TaaI | ACNGT | 4 cut(s) | 160, 263, 286, 296 |
| TaiI | ACGT | 1 cut(s) | 357 |
| TaqI | TCGA | 1 cut(s) | 308 |
| TasI | AATT | 2 cut(s) | 176, 398 |
| TatI | WGTACW | 1 cut(s) | 435 |
| TseFI | GTSAC | 2 cut(s) | 280, 296 |
| Tsp45I | GTSAC | 2 cut(s) | 280, 296 |
| TspDTI | ATGAA | 2 cut(s) | 220, 248 |
| VneI | GTGCAC | 1 cut(s) | 66 |
| VpaK11BI | GGWCC | 1 cut(s) | 256 |
| XceI | RCATGY | 1 cut(s) | 221 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 266 |
| XspI | CTAG | 1 cut(s) | 101 |
| ZrmI | AGTACT | 1 cut(s) | 437 |