Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001141

Physical Location & Seq

Genomic Coordinates Forward (+)

57763839 .. 57767088

Gene Structure 3250 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00040130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1281 bp

ATGTCTTCAGAGAAGATGATATGGTCGCAGATCATTTTGCTAGCTCCGGACAAAGATACTCTCAAAGTTTTATTTGGTTTAACAATGTTCCTACTGATTCTCCAAAACTTTTCCGCCAGAATCTTTTGCAAGATGAACCCCCGATCGAACGAGAAAATCCCCACCGTGGCACCACTCCGCCTGCCGGAAATGAAAGAATCAGTGGACGCCGTGGAGCGGATCCTAGACTATGACTTCAAGAACAAGAGGCTTCTAGAGGAAGCTCTCATCCACCCCTCCTGCCGCATAAGCGACGCCGTTTCGTATCAGCGGCTCGCGTTCCTCGGCGACACCGTTCTTGACCTCGCTGTAAGTAAAGACCTCTTCCTTGCTTACCCTGTAATTGACCAAGGTGACCTCACTAGGCTACGCTCCGCTAACGTCAGCAACGAGAAGTTCGCACGAGTGGCTGTGAGACATGAGCTTTATACCTACCTTCGCCGCACTGCAACTCGTGCTCTCGATGATCAGGTTAGGGAGTTTACTGAAGCTATAAGACGAGAAGAGGAGAAGACGCCTGTATTTGGACGATCTGTAGAAGCCCCTAAAGTTCTTGCAGATATTGTGGAGTCTGTGGCTGGTGCTATTTATTTTGACTTGAATTTTGATCTGGAACAACTTTGGATGAAATTTAAGCATGTTTTGGAGCCTATAGTTACTCTTGAAGAGTTGCAGCAACAATCTCATCCTGTGCAACAACCTCATCCTGTGACAGAGTTGCAGCAACATCCTCATCCTGGGACAGAGTTGCAGCAACATCCTCATCCTGTGACAGAGTTGCAGCAACAACCTCATCCTGTGACAGAGTTGCATCAACTTTGCCAGAAGCAGGGGAAGCATGTCAGTATCGAGTACGGGAGAGGTAAGATGAAGAGTAATATTGATGGCAAGTGTGTTGCCTTGGGTTCGGCTGAACAGAAAGGAAGTGCTAAGGAAAATGCTGCGGAGATGGCTCTGAGTAAGTTGATTTATGATGCGCTGGTTGAAGTTATTGCTGAAATGCCATTTTCTGTTAAAAAAGCAAAAGATGAGTTGCGTAAGATTTGTGCCGAGAAGAGCATTGAGCATGAAGAAGGTCCTCCACATGATAAGAAGTTTAAATCGATGGTAACTATAGGTCTGGTATATATGATTGGAGATGCAAAGTCAAAAGTAAAAGATGCGGAGGACTCTGCAGCTTTTTCGATGATCCGCTCGTTGCAAGACCCTAAAAATGTACGTATGAAACACCCATGTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016442 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031332 GO:0032296 GO:0032991 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DND1_DSRM Ribonuclease_3 dsrm

Protein Analysis

426

Amino Acids

48.34

Weight (kDa)

6.58

Isoelectric Point (pI)

51.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribonucleas_3_3	PF14622	81 - 215	2.2e-16	Ribonuclease-III-like
Ribonuclease_3	PF00636	103 - 212	3.5e-22	Ribonuclease III domain
dsrm	PF00035	367 - 413	5.3e-08	Double-stranded RNA binding motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20420
fragaria_vesca	FvH4_3g23250
malus_domestica	MD03G1196200.v1.1 MD11G1212500.v1.1
prunus_persica	Prupe.4G219200_v2.0.a1 Prupe.4G219200_v2.0.a1 Prupe.4G219400_v2.0.a1 Prupe.4G219400_v2.0.a1
pyrus_communis	pycom03g14830 pycom11g18750
rosa_chinensis	RchiOBHm_Chr5g0040511 RchiOBHm_Chr5g0040931 RchiOBHm_Chr5g0040941
rosa_laevigata	RLG00000033986 RLG00000034014 RLG00000034016 RLG00000034026
rosa_multiflora	Rmu_co8051550.1_g000001 Rmu_co8392905.1_g000001 Rmu_sc0002475.1_g000019 Rmu_sc0002848.1_g000007 Rmu_sc0006651.1_g000007 Rmu_sc0006651.1_g000008 Rmu_sc0008620.1_g000001
rosa_roxburghii	Rroxscaffold_1G00039580 Rroxscaffold_1G00039750 Rroxscaffold_1G00039760 Rroxscaffold_1G00040130 Rroxscaffold_1G00040850
rosa_rugosa	Rorug02G0350900 Rorug02G0350900 Rorug02G0351000 Rorug05G0185500 Rorug05G0188700 Rorug05G0188900 Rorug05G0188900
rosa_samantha	Rh2AG398700 Rh2BG409100 Rh2CG385500 Rh2CG540800 Rh2DG418900 Rh5AG272400 Rh5AG274300 Rh5AG274400 Rh5AG344200 Rh5BG276400 Rh5BG279300 Rh5BG279400 Rh5CG308900 Rh5CG311400 Rh5CG311600 Rh5DG284900 Rh5DG287500
rosa_wichuraiana	Rw2G032480 Rw5G025510 Rw5G025770 Rw5G025780 Rw5G025790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	169
AccBSI	CCGCTC	2 cut(s)	217, 1233
AccII	CGCG	1 cut(s)	317
AccIII	TCCGGA	1 cut(s)	46
AclWI	GGATC	3 cut(s)	214, 227, 1222
AcsI	RAATTY	2 cut(s)	640, 668
AcuI	CTGAAG	1 cut(s)	546
AcyI	GRCGYC	3 cut(s)	207, 294, 554
AfaI	GTAC	2 cut(s)	893, 1257
AfiI	CCNNNNNNNGG	6 cut(s)	166, 184, 216, 563, 776, 868
AgsI	TTSAA	4 cut(s)	238, 640, 704, 1025
AjnI	CCWGG	1 cut(s)	775
AleI	CACNNNNGTG	1 cut(s)	1272
AluBI	AGCT	5 cut(s)	44, 263, 463, 530, 1217
AluI	AGCT	5 cut(s)	44, 263, 463, 530, 1217
Alw21I	GWGCWC	1 cut(s)	499
Alw26I	GTCTC	1 cut(s)	448
AlwI	GGATC	3 cut(s)	214, 227, 1222
Aor13HI	TCCGGA	1 cut(s)	46
ApeKI	GCWGC	6 cut(s)	712, 760, 790, 820, 980, 1214
ApoI	RAATTY	2 cut(s)	640, 668
ArsI	GACNNNNNNTTYG	2 cut(s)	626, 658
AspLEI	GCGC	1 cut(s)	1018
AspS9I	GGNCC	1 cut(s)	1115
AsuHPI	GGTGA	1 cut(s)	404
AsuNHI	GCTAGC	1 cut(s)	40
AvaII	GGWCC	1 cut(s)	1115
BamHI	GGATCC	1 cut(s)	219
BanI	GGYRCC	1 cut(s)	169
BauI	CACGAG	2 cut(s)	441, 492
BbsI	GAAGAC	1 cut(s)	557
Bbv12I	GWGCWC	1 cut(s)	499
BbvI	GCAGC	6 cut(s)	724, 772, 802, 832, 967, 1226
BccI	CCATC	3 cut(s)	917, 982, 1138
BceAI	ACGGC	2 cut(s)	194, 281
BcgI	CGANNNNNNTGC	2 cut(s)	1203, 1237
BciT130I	CCWGG	1 cut(s)	777
BclI	TGATCA	1 cut(s)	505
BcoDI	GTCTC	1 cut(s)	448
BfaI	CTAG	4 cut(s)	41, 224, 254, 402
BfmI	CTRYAG	4 cut(s)	573, 690, 1152, 1212
BisI	GCNGC	9 cut(s)	283, 311, 481, 713, 761, 791, 821, 981, 1215
BlsI	GCNGC	9 cut(s)	284, 312, 482, 714, 762, 792, 822, 982, 1216
Bme1390I	CCNGG	1 cut(s)	777
Bme18I	GGWCC	1 cut(s)	1115
BmgT120I	GGNCC	1 cut(s)	1115
BmiI	GGNNCC	3 cut(s)	171, 221, 687
BmrFI	CCNGG	1 cut(s)	777
BmsI	GCATC	4 cut(s)	859, 1003, 1168, 1189
BmtI	GCTAGC	1 cut(s)	44
BpiI	GAAGAC	1 cut(s)	557
Bpu10I	CCTNAGC	1 cut(s)	969
Bsa29I	ATCGAT	1 cut(s)	1142
BsaAI	YACGTR	1 cut(s)	1259
BsaHI	GRCGYC	3 cut(s)	207, 294, 554
BsaJI	CCNNGG	6 cut(s)	165, 210, 322, 388, 776, 939
BsaWI	WCCGGW	1 cut(s)	46
BsaXI	ACNNNNNCTCC	2 cut(s)	84, 114
Bsc4I	CCNNNNNNNGG	6 cut(s)	166, 184, 216, 563, 776, 868
BseAI	TCCGGA	1 cut(s)	46
BseBI	CCWGG	1 cut(s)	777
BseCI	ATCGAT	1 cut(s)	1142
BseDI	CCNNGG	6 cut(s)	165, 210, 322, 388, 776, 939
BseGI	GGATG	9 cut(s)	267, 669, 724, 742, 766, 772, 796, 802, 832
BseLI	CCNNNNNNNGG	6 cut(s)	166, 184, 216, 563, 776, 868
BseMII	CTCAG	1 cut(s)	986
BseRI	GAGGAG	1 cut(s)	560
BseXI	GCAGC	6 cut(s)	724, 772, 802, 832, 967, 1226
Bsh1236I	CGCG	1 cut(s)	317
Bsh1285I	CGRYCG	1 cut(s)	146
BshNI	GGYRCC	1 cut(s)	169
BshVI	ATCGAT	1 cut(s)	1142
BsiEI	CGRYCG	1 cut(s)	146
BsiHKAI	GWGCWC	1 cut(s)	499
BsiSI	CCGG	2 cut(s)	47, 185
BslFI	GGGAC	1 cut(s)	793
BslI	CCNNNNNNNGG	6 cut(s)	166, 184, 216, 563, 776, 868
BsmAI	GTCTC	1 cut(s)	448
BsmFI	GGGAC	1 cut(s)	793
Bsp1286I	GDGCHC	1 cut(s)	499
Bsp13I	TCCGGA	1 cut(s)	46
Bsp143I	GATC	7 cut(s)	30, 143, 219, 505, 569, 646, 1227
BspCNI	CTCAG	1 cut(s)	987
BspDI	ATCGAT	1 cut(s)	1142
BspEI	TCCGGA	1 cut(s)	46
BspFNI	CGCG	1 cut(s)	317
BspLI	GGNNCC	3 cut(s)	171, 221, 687
BspMAI	CTGCAG	1 cut(s)	1216
BspOI	GCTAGC	1 cut(s)	44
BspPI	GGATC	3 cut(s)	214, 227, 1222
BspQI	GCTCTTC	1 cut(s)	1088
BspT107I	GGYRCC	1 cut(s)	169
BsrBI	CCGCTC	2 cut(s)	217, 1233
BssECI	CCNNGG	6 cut(s)	165, 210, 322, 388, 776, 939
BssMI	GATC	7 cut(s)	30, 143, 219, 505, 569, 646, 1227
BssNI	GRCGYC	3 cut(s)	207, 294, 554
BssSI	CACGAG	2 cut(s)	441, 492
BssT1I	CCWWGG	2 cut(s)	388, 939
Bst2BI	CACGAG	2 cut(s)	441, 492
Bst2UI	CCWGG	1 cut(s)	777
Bst4CI	ACNGT	2 cut(s)	166, 334
Bst6I	CTCTTC	5 cut(s)	368, 537, 699, 905, 1088
BstACI	GRCGYC	3 cut(s)	207, 294, 554
BstAPI	GCANNNNNTGC	1 cut(s)	494
BstBAI	YACGTR	1 cut(s)	1259
BstC8I	GCNNGC	3 cut(s)	42, 182, 315
BstDEI	CTNAG	2 cut(s)	969, 995
BstDSI	CCRYGG	2 cut(s)	165, 210
BstEII	GGTNACC	1 cut(s)	392
BstF5I	GGATG	9 cut(s)	267, 669, 724, 742, 766, 772, 796, 802, 832
BstFNI	CGCG	1 cut(s)	317
BstHHI	GCGC	1 cut(s)	1018
BstKTI	GATC	7 cut(s)	33, 146, 222, 508, 572, 649, 1230
BstMAI	GTCTC	1 cut(s)	448
BstMBI	GATC	7 cut(s)	30, 143, 219, 505, 569, 646, 1227
BstMCI	CGRYCG	1 cut(s)	146
BstMWI	GCNNNNNNNGC	5 cut(s)	288, 446, 494, 874, 989
BstNI	CCWGG	1 cut(s)	777
BstNSI	RCATGY	2 cut(s)	680, 881
BstPI	GGTNACC	1 cut(s)	392
BstSCI	CCNGG	1 cut(s)	775
BstSFI	CTRYAG	4 cut(s)	573, 690, 1152, 1212
BstSNI	TACGTA	1 cut(s)	1259
BstUI	CGCG	1 cut(s)	317
BstV1I	GCAGC	6 cut(s)	724, 772, 802, 832, 967, 1226
BstV2I	GAAGAC	1 cut(s)	557
BstX2I	RGATCY	1 cut(s)	219
BstYI	RGATCY	1 cut(s)	219
Bsu15I	ATCGAT	1 cut(s)	1142
BsuTUI	ATCGAT	1 cut(s)	1142
BtgI	CCRYGG	2 cut(s)	165, 210
BtsCI	GGATG	9 cut(s)	267, 669, 724, 742, 766, 772, 796, 802, 832
BtsI	GCAGTG	1 cut(s)	483
BtsIMutI	CAGTG	2 cut(s)	207, 483
Cac8I	GCNNGC	3 cut(s)	42, 182, 315
CfoI	GCGC	1 cut(s)	1018
Cfr13I	GGNCC	1 cut(s)	1115
ClaI	ATCGAT	1 cut(s)	1142
CseI	GACGC	3 cut(s)	215, 302, 562
Csp6I	GTAC	2 cut(s)	892, 1256
CviAII	CATG	6 cut(s)	458, 677, 878, 1106, 1124, 1272
CviQI	GTAC	2 cut(s)	892, 1256
DdeI	CTNAG	2 cut(s)	969, 995
DpnI	GATC	7 cut(s)	32, 145, 221, 507, 571, 648, 1229
DpnII	GATC	7 cut(s)	30, 143, 219, 505, 569, 646, 1227
DraI	TTTAAA	1 cut(s)	1138
Eam1104I	CTCTTC	5 cut(s)	368, 537, 699, 905, 1088
EarI	CTCTTC	5 cut(s)	368, 537, 699, 905, 1088
EciI	GGCGGA	2 cut(s)	103, 167
Eco105I	TACGTA	1 cut(s)	1259
Eco130I	CCWWGG	2 cut(s)	388, 939
Eco47I	GGWCC	1 cut(s)	1115
Eco57I	CTGAAG	1 cut(s)	546
Eco91I	GGTNACC	1 cut(s)	392
EcoO109I	RGGNCCY	1 cut(s)	1115
EcoO65I	GGTNACC	1 cut(s)	392
EcoRII	CCWGG	1 cut(s)	775
EcoT14I	CCWWGG	2 cut(s)	388, 939
ErhI	CCWWGG	2 cut(s)	388, 939
FaeI	CATG	6 cut(s)	461, 680, 881, 1109, 1127, 1275
FaqI	GGGAC	1 cut(s)	793
FatI	CATG	6 cut(s)	457, 676, 877, 1105, 1123, 1271
FbaI	TGATCA	1 cut(s)	505
Fnu4HI	GCNGC	9 cut(s)	283, 311, 481, 713, 761, 791, 821, 981, 1215
FokI	GGATG	9 cut(s)	254, 676, 711, 729, 753, 759, 783, 789, 819
Fsp4HI	GCNGC	9 cut(s)	283, 311, 481, 713, 761, 791, 821, 981, 1215
FspBI	CTAG	4 cut(s)	41, 224, 254, 402
GlaI	GCGC	1 cut(s)	1017
GluI	GCNGC	9 cut(s)	283, 311, 481, 713, 761, 791, 821, 981, 1215
HapII	CCGG	2 cut(s)	47, 185
HgaI	GACGC	3 cut(s)	215, 302, 562
HhaI	GCGC	1 cut(s)	1018
Hin1I	GRCGYC	3 cut(s)	207, 294, 554
Hin1II	CATG	6 cut(s)	461, 680, 881, 1109, 1127, 1275
Hin6I	GCGC	1 cut(s)	1016
HinP1I	GCGC	1 cut(s)	1016
HinfI	GANTC	5 cut(s)	97, 120, 197, 608, 1208
HpaII	CCGG	2 cut(s)	47, 185
HphI	GGTGA	1 cut(s)	404
Hpy166II	GTNNAC	2 cut(s)	205, 522
Hpy188I	TCNGA	2 cut(s)	10, 996
Hpy188III	TCNNGA	7 cut(s)	47, 238, 254, 338, 500, 650, 701
Hpy8I	GTNNAC	2 cut(s)	205, 522
Hpy99I	CGWCG	1 cut(s)	296
HpyAV	CCTTC	2 cut(s)	485, 1106
HpyCH4III	ACNGT	2 cut(s)	166, 334
HpyCH4IV	ACGT	2 cut(s)	420, 1258
HpyF10VI	GCNNNNNNNGC	5 cut(s)	288, 446, 494, 874, 989
HpyF3I	CTNAG	2 cut(s)	969, 995
HpySE526I	ACGT	2 cut(s)	420, 1258
Hsp92I	GRCGYC	3 cut(s)	207, 294, 554
Hsp92II	CATG	6 cut(s)	461, 680, 881, 1109, 1127, 1275
HspAI	GCGC	1 cut(s)	1016
Kpn2I	TCCGGA	1 cut(s)	46
Ksp22I	TGATCA	1 cut(s)	505
Kzo9I	GATC	7 cut(s)	30, 143, 219, 505, 569, 646, 1227
LguI	GCTCTTC	1 cut(s)	1088
LmnI	GCTCC	4 cut(s)	49, 214, 416, 685
Lsp1109I	GCAGC	6 cut(s)	724, 772, 802, 832, 967, 1226
LweI	GCATC	4 cut(s)	859, 1003, 1168, 1189
MaeI	CTAG	4 cut(s)	41, 224, 254, 402
MaeII	ACGT	2 cut(s)	420, 1258
MaeIII	GTNAC	6 cut(s)	392, 694, 748, 808, 838, 1147
MalI	GATC	7 cut(s)	32, 145, 221, 507, 571, 648, 1229
MbiI	CCGCTC	2 cut(s)	217, 1233
MboI	GATC	7 cut(s)	30, 143, 219, 505, 569, 646, 1227
MboII	GAAGA	8 cut(s)	25, 355, 554, 562, 716, 922, 1105, 1121
MflI	RGATCY	1 cut(s)	219
MhlI	GDGCHC	1 cut(s)	499
MluCI	AATT	3 cut(s)	381, 640, 668
MlyI	GAGTC	2 cut(s)	617, 1202
MroI	TCCGGA	1 cut(s)	46
MseI	TTAA	4 cut(s)	80, 672, 1053, 1137
MslI	CAYNNNNRTG	1 cut(s)	1272
MspA1I	CMGCKG	1 cut(s)	310
MspI	CCGG	2 cut(s)	47, 185
MspR9I	CCNGG	1 cut(s)	777
MvaI	CCWGG	1 cut(s)	777
MvnI	CGCG	1 cut(s)	317
MwoI	GCNNNNNNNGC	5 cut(s)	288, 446, 494, 874, 989
NdeII	GATC	7 cut(s)	30, 143, 219, 505, 569, 646, 1227
NheI	GCTAGC	1 cut(s)	40
NlaIII	CATG	6 cut(s)	461, 680, 881, 1109, 1127, 1275
NlaIV	GGNNCC	3 cut(s)	171, 221, 687
NmeAIII	GCCGAG	2 cut(s)	303, 1114
NmuCI	GTSAC	4 cut(s)	392, 748, 808, 838
NspI	RCATGY	2 cut(s)	680, 881
OliI	CACNNNNGTG	1 cut(s)	1272
PciSI	GCTCTTC	1 cut(s)	1088
PcsI	WCGNNNNNNNCGW	2 cut(s)	330, 426
PfeI	GAWTC	3 cut(s)	97, 120, 197
PkrI	GCNGC	9 cut(s)	284, 312, 482, 714, 762, 792, 822, 982, 1216
Ple19I	CGATCG	1 cut(s)	146
PleI	GAGTC	2 cut(s)	616, 1202
PpsI	GAGTC	2 cut(s)	616, 1202
Ppu21I	YACGTR	1 cut(s)	1259
PpuMI	RGGWCCY	1 cut(s)	1115
Psp5II	RGGWCCY	1 cut(s)	1115
Psp6I	CCWGG	1 cut(s)	775
PspEI	GGTNACC	1 cut(s)	392
PspGI	CCWGG	1 cut(s)	775
PspN4I	GGNNCC	3 cut(s)	171, 221, 687
PspPI	GGNCC	1 cut(s)	1115
PspPPI	RGGWCCY	1 cut(s)	1115
PstI	CTGCAG	1 cut(s)	1216
PsuI	RGATCY	1 cut(s)	219
PvuI	CGATCG	1 cut(s)	146
RsaI	GTAC	2 cut(s)	893, 1257
RsaNI	GTAC	2 cut(s)	892, 1256
RseI	CAYNNNNRTG	1 cut(s)	1272
SapI	GCTCTTC	1 cut(s)	1088
SaqAI	TTAA	4 cut(s)	80, 672, 1053, 1137
SatI	GCNGC	9 cut(s)	283, 311, 481, 713, 761, 791, 821, 981, 1215
Sau3AI	GATC	7 cut(s)	30, 143, 219, 505, 569, 646, 1227
Sau96I	GGNCC	1 cut(s)	1115
SchI	GAGTC	2 cut(s)	617, 1202
ScrFI	CCNGG	1 cut(s)	777
SduI	GDGCHC	1 cut(s)	499
SfaNI	GCATC	4 cut(s)	859, 1003, 1168, 1189
SfcI	CTRYAG	4 cut(s)	573, 690, 1152, 1212
SinI	GGWCC	1 cut(s)	1115
SmiMI	CAYNNNNRTG	1 cut(s)	1272
SnaBI	TACGTA	1 cut(s)	1259
Sse9I	AATT	3 cut(s)	381, 640, 668
SspI	AATATT	1 cut(s)	919
SspMI	CTAG	4 cut(s)	41, 224, 254, 402
StyD4I	CCNGG	1 cut(s)	775
StyI	CCWWGG	2 cut(s)	388, 939
TaaI	ACNGT	2 cut(s)	166, 334
TaiI	ACGT	2 cut(s)	423, 1261
TaqI	TCGA	5 cut(s)	146, 501, 888, 1142, 1223
TasI	AATT	3 cut(s)	381, 640, 668
TauI	GCSGC	3 cut(s)	285, 313, 483
TfiI	GAWTC	3 cut(s)	97, 120, 197
Tru1I	TTAA	4 cut(s)	80, 672, 1053, 1137
Tru9I	TTAA	4 cut(s)	80, 672, 1053, 1137
TscAI	CASTG	2 cut(s)	207, 490
TseFI	GTSAC	4 cut(s)	392, 748, 808, 838
TseI	GCWGC	6 cut(s)	712, 760, 790, 820, 980, 1214
Tsp45I	GTSAC	4 cut(s)	392, 748, 808, 838
TspDTI	ATGAA	6 cut(s)	149, 206, 680, 923, 1122, 1277
TspRI	CASTG	2 cut(s)	207, 490
VpaK11BI	GGWCC	1 cut(s)	1115
XapI	RAATTY	2 cut(s)	640, 668
XbaI	TCTAGA	1 cut(s)	253
XceI	RCATGY	2 cut(s)	680, 881
XspI	CTAG	4 cut(s)	41, 224, 254, 402

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.