Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001141

Physical Location & Seq

Genomic Coordinates Reverse (-)

44107467 .. 44113448

Gene Structure 5982 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0350900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGTGGAGGTCAGTCGCGGCAAGATCATCAAGAGCTTCTCTTTCGGCAAAGGCAGCACACAACTTCGGTGCAACCCAAAACCCCAAGGTACTCTCCTCTAAAACCCTAGTCCCACTTGCCCAATCTTCTCATTTCCCCGCTAGATCCCCTCCCTGCCCAAACCCCAGGTTCTTCTCTCAGGTCTCAGAAGACCTTAGTTATTCTGATACCGCAGAACCACCGCCGCCGCCGTTTTCAGAGGCTGAAAATGACGACGCCCAGATGGACGGTTTTGCCCCTGGGGATGGGGTTGATGGGGTTTCGGAGCAACTGGGTTCTGGTGAAATTGGGGAGTTAGGGGGAGAGGAAGAAGAGGTTCATGAGATTGATGTGGAGAAATTGGAGGGTTTGTTGTCTCTGCTTCATAGTAGTGCTGATGGGTCTCTTGAATCTAGTTTCAGGGATTTGGATTTGACTCTACATGAAGAATTTGTGGTTAGAGTTCTTGAAACCCCACTTATCGTGGGGGAGAATTTGATAAGGTTCTTCAAGTGGGGTTTGAAGGAGAGACCCGAATTTAGAGTCAATAAGCAGATATTGGATGCTCTTGTGATTGCAATGTGTGGTGAGGTTGTTACCAAGAAAGACATGTATTCTTTGTGGGATTTGGTTAAGGGGGTTGGTGAGAAGGAGGGGAGTTTGTTGAATGTGGATATTCTCAATGTGTTGATGTCTTCGTTCGCGAAATTGGGTGAAGGGAAAGCTGCTTTGGAGGTGTTGAACAAGTTTGATGATTTTGGATGCGTCCCCAGTGCGGATTCATATTACTTTGCGATTGAGGGGCTTTGCAGGAGTTTGGATTTTGATTTCGCTAAGTCTGTTTCGGAGAAGATGATTTGTGCAAGAAGCTCGCCGGATGCTGAAAAGGTTGGTAGGATCGTATCTTGGTTCTGCAAGGCTGGAATGGCGAAAGAGGCCCATTCGGTGTATTTGTTGTTGAAGGAGGAGAAGCAGTGCCGGCCTCGCTCATCTGTTCATTTTTTGATCCGGTCACTGAGTAGGGAGGATGAAAATGTGAAATTAGCTCTAGACTTGCTAGAGGATATTGATGGTGAAGCACGGAAATATGCGATAAAGCCCTTTTCTGCTGTTGTTCAAGGGTTATGTAGGATAAAGGATGTTGCTGGGGCAAGAAAATTGCTTCTTGAGATGGCAAAAAAAGGTCCACCTCCTGGAAATGCAGTTTTTAATTCGGTTATCAATGGCTATTCTAAGGCTGGGGATATGCAAGATGCGATAGAGATGATGAAGCTGATGGAGAGTAGGGGCTTGAAACCAGATGTCTTTACTTACACTGTTATTATGAGTGGTTATGCAAAAGGTGGTCAGATGGAGGAGGCATGCAATATCTTATCTGAAGCCAAAAAGAAGCATGTTAAATTGACTCCAGTGACTTATCATACACTCATCTCCAGCTTTTGCAAACTGGAACAGTTTGACAAGGCTTTGGAGTTATTTCATGAGATGAAAGATTATGGGGTCCAACCCACGACTGATGAGTACAACAAGTTGATCCAATCTCTTTGCCTGAAAGCACTAGATTGGGAAACGTCAGAGAAACTGCTAGAAGAAATGAAAGATAGCGGGTTGTATCTTAATGGAATTACGAGAGGTCTCATAAGAGCAGTCAAGGAACTGCAGACGGAGAAAGTAGAGACTGAGAAAATAGTTGCAGAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016442 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031332 GO:0032296 GO:0032991 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DND1_DSRM Ribonuclease_3 dsrm

Protein Analysis

573

Amino Acids

63.4

Weight (kDa)

5.16

Isoelectric Point (pI)

41.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	329 - 482	2.6e-06	Pentacotripeptide-repeat region of PRORP
PPR_long	PF17177	383 - 519	4.9e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	393 - 451	2.5e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	406 - 453	3.8e-15	PPR repeat family
PPR	PF01535	408 - 437	1.7e-07	PPR repeat
PPR_3	PF13812	432 - 486	3.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	435 - 466	2.8e-07	PPR repeat
PPR_2	PF13041	445 - 488	1.2e-08	PPR repeat family
TPR_24	PF23276	452 - 542	4.2e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	463 - 519	6.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	471 - 503	1.5e-08	PPR repeat
PPR_2	PF13041	477 - 522	1.1e-11	PPR repeat family
PPR	PF01535	477 - 507	4.7e-09	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20420
fragaria_vesca	FvH4_3g23250
malus_domestica	MD03G1196200.v1.1 MD11G1212500.v1.1
prunus_persica	Prupe.4G219200_v2.0.a1 Prupe.4G219200_v2.0.a1 Prupe.4G219400_v2.0.a1 Prupe.4G219400_v2.0.a1
pyrus_communis	pycom03g14830 pycom11g18750
rosa_chinensis	RchiOBHm_Chr5g0040511 RchiOBHm_Chr5g0040931 RchiOBHm_Chr5g0040941
rosa_laevigata	RLG00000033986 RLG00000034014 RLG00000034016 RLG00000034026
rosa_multiflora	Rmu_co8051550.1_g000001 Rmu_co8392905.1_g000001 Rmu_sc0002475.1_g000019 Rmu_sc0002848.1_g000007 Rmu_sc0006651.1_g000007 Rmu_sc0006651.1_g000008 Rmu_sc0008620.1_g000001
rosa_roxburghii	Rroxscaffold_1G00039580 Rroxscaffold_1G00039750 Rroxscaffold_1G00039760 Rroxscaffold_1G00040130 Rroxscaffold_1G00040850
rosa_rugosa	Rorug02G0350900 Rorug02G0350900 Rorug02G0351000 Rorug05G0185500 Rorug05G0188700 Rorug05G0188900 Rorug05G0188900
rosa_samantha	Rh2AG398700 Rh2BG409100 Rh2CG385500 Rh2CG540800 Rh2DG418900 Rh5AG272400 Rh5AG274300 Rh5AG274400 Rh5AG344200 Rh5BG276400 Rh5BG279300 Rh5BG279400 Rh5CG308900 Rh5CG311400 Rh5CG311600 Rh5DG284900 Rh5DG287500
rosa_wichuraiana	Rw2G032480 Rw5G025510 Rw5G025770 Rw5G025780 Rw5G025790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1211
AccII	CGCG	2 cut(s)	17, 722
AciI	CCGC	8 cut(s)	17, 138, 210, 221, 224, 227, 794, 1623
AclWI	GGATC	4 cut(s)	138, 923, 1018, 1546
AcsI	RAATTY	3 cut(s)	467, 511, 554
AcuI	CTGAAG	1 cut(s)	1416
AcyI	GRCGYC	1 cut(s)	255
AfaI	GTAC	2 cut(s)	90, 1541
AfiI	CCNNNNNNNGG	3 cut(s)	284, 793, 1211
AflIII	ACRYGT	1 cut(s)	627
AgsI	TTSAA	9 cut(s)	428, 488, 529, 541, 685, 760, 979, 1136, 1312
AjnI	CCWGG	3 cut(s)	164, 277, 1210
AjuI	GAANNNNNNNTTGG	2 cut(s)	731, 763
AluBI	AGCT	6 cut(s)	35, 743, 888, 1064, 1291, 1455
AluI	AGCT	6 cut(s)	35, 743, 888, 1064, 1291, 1455
Alw26I	GTCTC	6 cut(s)	187, 399, 426, 541, 1658, 1688
AlwI	GGATC	4 cut(s)	138, 923, 1018, 1546
AlwNI	CAGNNNCTG	1 cut(s)	242
AoxI	GGCC	2 cut(s)	954, 998
ApeKI	GCWGC	2 cut(s)	53, 743
ApoI	RAATTY	3 cut(s)	467, 511, 554
ArsI	GACNNNNNNTTYG	2 cut(s)	546, 578
Asp700I	GAANNNNTTC	1 cut(s)	354
AspS9I	GGNCC	3 cut(s)	955, 1202, 1519
AsuHPI	GGTGA	5 cut(s)	332, 617, 674, 743, 1103
AvaII	GGWCC	2 cut(s)	1202, 1519
BbsI	GAAGAC	2 cut(s)	195, 705
BbvI	GCAGC	2 cut(s)	65, 730
BccI	CCATC	8 cut(s)	256, 278, 287, 410, 1082, 1183, 1288, 1363
BceAI	ACGGC	1 cut(s)	214
BcgI	CGANNNNNNTGC	2 cut(s)	870, 904
BciT130I	CCWGG	3 cut(s)	166, 279, 1212
BcoDI	GTCTC	6 cut(s)	187, 399, 426, 541, 1658, 1688
BfaI	CTAG	7 cut(s)	107, 141, 432, 1067, 1076, 1577, 1604
BfmI	CTRYAG	1 cut(s)	1676
BisI	GCNGC	5 cut(s)	18, 54, 224, 227, 744
BlsI	GCNGC	5 cut(s)	19, 55, 225, 228, 745
Bme1390I	CCNGG	3 cut(s)	166, 279, 1212
Bme18I	GGWCC	2 cut(s)	1202, 1519
BmgT120I	GGNCC	3 cut(s)	955, 1202, 1519
BmiI	GGNNCC	1 cut(s)	1520
BmrFI	CCNGG	3 cut(s)	166, 279, 1212
BmrI	ACTGGG	2 cut(s)	320, 783
BmsI	GCATC	4 cut(s)	571, 770, 886, 1261
BmuI	ACTGGG	2 cut(s)	320, 783
BpiI	GAAGAC	2 cut(s)	195, 705
BpmI	CTGGAG	2 cut(s)	1410, 1435
BpuEI	CTTGAG	1 cut(s)	1205
BsaHI	GRCGYC	1 cut(s)	255
BsaI	GGTCTC	4 cut(s)	187, 426, 541, 1658
BsaJI	CCNNGG	4 cut(s)	84, 164, 277, 278
BsaWI	WCCGGW	1 cut(s)	1026
BsaXI	ACNNNNNCTCC	4 cut(s)	374, 404, 977, 1007
Bsc4I	CCNNNNNNNGG	3 cut(s)	284, 793, 1211
Bse118I	RCCGGY	1 cut(s)	996
Bse1I	ACTGG	4 cut(s)	315, 789, 1427, 1470
Bse3DI	GCAATG	1 cut(s)	603
BseBI	CCWGG	3 cut(s)	166, 279, 1212
BseDI	CCNNGG	4 cut(s)	84, 164, 277, 278
BseGI	GGATG	6 cut(s)	289, 586, 785, 901, 1051, 1162
BseLI	CCNNNNNNNGG	3 cut(s)	284, 793, 1211
BseMI	GCAATG	1 cut(s)	603
BseMII	CTCAG	4 cut(s)	191, 198, 1025, 1689
BseNI	ACTGG	4 cut(s)	315, 789, 1427, 1470
BseRI	GAGGAG	3 cut(s)	85, 998, 1388
BseXI	GCAGC	2 cut(s)	65, 730
BseYI	CCCAGC	2 cut(s)	1163, 1256
Bsh1236I	CGCG	2 cut(s)	17, 722
BshFI	GGCC	2 cut(s)	956, 1000
BsiSI	CCGG	3 cut(s)	893, 997, 1027
BslFI	GGGAC	2 cut(s)	95, 770
BslI	CCNNNNNNNGG	3 cut(s)	284, 793, 1211
BsmAI	GTCTC	6 cut(s)	187, 399, 426, 541, 1658, 1688
BsmFI	GGGAC	2 cut(s)	95, 770
BsnI	GGCC	2 cut(s)	956, 1000
Bso31I	GGTCTC	4 cut(s)	187, 426, 541, 1658
Bsp143I	GATC	5 cut(s)	23, 143, 915, 1023, 1551
Bsp68I	TCGCGA	1 cut(s)	722
BspACI	CCGC	8 cut(s)	17, 138, 210, 221, 224, 227, 794, 1623
BspANI	GGCC	2 cut(s)	956, 1000
BspCNI	CTCAG	4 cut(s)	190, 197, 1026, 1690
BspFNI	CGCG	2 cut(s)	17, 722
BspHI	TCATGA	2 cut(s)	358, 1498
BspLI	GGNNCC	1 cut(s)	1520
BspMAI	CTGCAG	1 cut(s)	1680
BspPI	GGATC	4 cut(s)	138, 923, 1018, 1546
BspTNI	GGTCTC	4 cut(s)	187, 426, 541, 1658
BsrDI	GCAATG	1 cut(s)	603
BsrFI	RCCGGY	1 cut(s)	996
BsrI	ACTGG	4 cut(s)	315, 789, 1427, 1470
BssAI	RCCGGY	1 cut(s)	996
BssECI	CCNNGG	4 cut(s)	84, 164, 277, 278
BssMI	GATC	5 cut(s)	23, 143, 915, 1023, 1551
BssNI	GRCGYC	1 cut(s)	255
BssT1I	CCWWGG	1 cut(s)	84
Bst2UI	CCWGG	3 cut(s)	166, 279, 1212
Bst4CI	ACNGT	3 cut(s)	269, 1336, 1473
Bst6I	CTCTTC	1 cut(s)	345
BstACI	GRCGYC	1 cut(s)	255
BstC8I	GCNNGC	3 cut(s)	890, 998, 1381
BstDEI	CTNAG	7 cut(s)	177, 184, 194, 852, 1034, 1251, 1698
BstF5I	GGATG	6 cut(s)	289, 586, 785, 901, 1051, 1162
BstFNI	CGCG	2 cut(s)	17, 722
BstKTI	GATC	5 cut(s)	26, 146, 918, 1026, 1554
BstMAI	GTCTC	6 cut(s)	187, 399, 426, 541, 1658, 1688
BstMBI	GATC	5 cut(s)	23, 143, 915, 1023, 1551
BstMWI	GCNNNNNNNGC	5 cut(s)	53, 944, 953, 997, 1002
BstNI	CCWGG	3 cut(s)	166, 279, 1212
BstNSI	RCATGY	3 cut(s)	631, 1383, 1415
BstSCI	CCNGG	3 cut(s)	164, 277, 1210
BstSFI	CTRYAG	1 cut(s)	1676
BstUI	CGCG	2 cut(s)	17, 722
BstV1I	GCAGC	2 cut(s)	65, 730
BstV2I	GAAGAC	2 cut(s)	195, 705
BstX2I	RGATCY	1 cut(s)	143
BstYI	RGATCY	1 cut(s)	143
BsuRI	GGCC	2 cut(s)	956, 1000
BtsCI	GGATG	6 cut(s)	289, 586, 785, 901, 1051, 1162
BtsI	GCAGTG	1 cut(s)	998
BtsIMutI	CAGTG	5 cut(s)	796, 998, 1031, 1332, 1434
BtuMI	TCGCGA	1 cut(s)	722
Cac8I	GCNNGC	3 cut(s)	890, 998, 1381
CaiI	CAGNNNCTG	1 cut(s)	242
CciI	TCATGA	2 cut(s)	358, 1498
Cfr10I	RCCGGY	1 cut(s)	996
Cfr13I	GGNCC	3 cut(s)	955, 1202, 1519
CseI	GACGC	2 cut(s)	263, 772
Csp6I	GTAC	2 cut(s)	89, 1540
CviAII	CATG	6 cut(s)	359, 461, 628, 1380, 1412, 1499
CviQI	GTAC	2 cut(s)	89, 1540
DdeI	CTNAG	7 cut(s)	177, 184, 194, 852, 1034, 1251, 1698
DpnI	GATC	5 cut(s)	25, 145, 917, 1025, 1553
DpnII	GATC	5 cut(s)	23, 143, 915, 1023, 1551
Eam1104I	CTCTTC	1 cut(s)	345
EarI	CTCTTC	1 cut(s)	345
Eco130I	CCWWGG	1 cut(s)	84
Eco31I	GGTCTC	4 cut(s)	187, 426, 541, 1658
Eco47I	GGWCC	2 cut(s)	1202, 1519
Eco57I	CTGAAG	1 cut(s)	1416
EcoRII	CCWGG	3 cut(s)	164, 277, 1210
EcoT14I	CCWWGG	1 cut(s)	84
ErhI	CCWWGG	1 cut(s)	84
FaeI	CATG	6 cut(s)	362, 464, 631, 1383, 1415, 1502
FaqI	GGGAC	2 cut(s)	95, 770
FatI	CATG	6 cut(s)	358, 460, 627, 1379, 1411, 1498
FauI	CCCGC	2 cut(s)	145, 1616
Fnu4HI	GCNGC	5 cut(s)	18, 54, 224, 227, 744
FokI	GGATG	6 cut(s)	296, 593, 792, 908, 1058, 1169
Fsp4HI	GCNGC	5 cut(s)	18, 54, 224, 227, 744
FspBI	CTAG	7 cut(s)	107, 141, 432, 1067, 1076, 1577, 1604
GluI	GCNGC	5 cut(s)	18, 54, 224, 227, 744
GsaI	CCCAGC	2 cut(s)	1167, 1260
GsuI	CTGGAG	2 cut(s)	1410, 1435
HaeIII	GGCC	2 cut(s)	956, 1000
HapII	CCGG	3 cut(s)	893, 997, 1027
HgaI	GACGC	2 cut(s)	263, 772
Hin1I	GRCGYC	1 cut(s)	255
Hin1II	CATG	6 cut(s)	362, 464, 631, 1383, 1415, 1502
HinfI	GANTC	5 cut(s)	428, 454, 561, 797, 1423
HpaII	CCGG	3 cut(s)	893, 997, 1027
HphI	GGTGA	5 cut(s)	332, 617, 674, 743, 1103
Hpy166II	GTNNAC	1 cut(s)	1205
Hpy188I	TCNGA	8 cut(s)	187, 205, 238, 304, 865, 1368, 1396, 1594
Hpy188III	TCNNGA	8 cut(s)	30, 359, 425, 485, 721, 1067, 1184, 1499
Hpy8I	GTNNAC	1 cut(s)	1205
Hpy99I	CGWCG	1 cut(s)	257
HpyAV	CCTTC	4 cut(s)	535, 661, 728, 973
HpyCH4III	ACNGT	3 cut(s)	269, 1336, 1473
HpyCH4IV	ACGT	1 cut(s)	1589
HpyF10VI	GCNNNNNNNGC	5 cut(s)	53, 944, 953, 997, 1002
HpyF3I	CTNAG	7 cut(s)	177, 184, 194, 852, 1034, 1251, 1698
HpySE526I	ACGT	1 cut(s)	1589
Hsp92I	GRCGYC	1 cut(s)	255
Hsp92II	CATG	6 cut(s)	362, 464, 631, 1383, 1415, 1502
KroI	GCCGGC	1 cut(s)	996
KroNI	GCCGGC	1 cut(s)	998
Kzo9I	GATC	5 cut(s)	23, 143, 915, 1023, 1551
LmnI	GCTCC	1 cut(s)	304
Lsp1109I	GCAGC	2 cut(s)	65, 730
LweI	GCATC	4 cut(s)	571, 770, 886, 1261
MaeI	CTAG	7 cut(s)	107, 141, 432, 1067, 1076, 1577, 1604
MaeII	ACGT	1 cut(s)	1589
MaeIII	GTNAC	3 cut(s)	613, 1029, 1429
MalI	GATC	5 cut(s)	25, 145, 917, 1025, 1553
MboI	GATC	5 cut(s)	23, 143, 915, 1023, 1551
MflI	RGATCY	1 cut(s)	143
MlyI	GAGTC	3 cut(s)	448, 570, 1417
MmeI	TCCRAC	1 cut(s)	1546
MroNI	GCCGGC	1 cut(s)	996
MroXI	GAANNNNTTC	1 cut(s)	354
MseI	TTAA	4 cut(s)	651, 1227, 1416, 1635
MslI	CAYNNNNRTG	1 cut(s)	408
MspI	CCGG	3 cut(s)	893, 997, 1027
MspR9I	CCNGG	3 cut(s)	166, 279, 1212
MvaI	CCWGG	3 cut(s)	166, 279, 1212
MvnI	CGCG	2 cut(s)	17, 722
MwoI	GCNNNNNNNGC	5 cut(s)	53, 944, 953, 997, 1002
NaeI	GCCGGC	1 cut(s)	998
NdeII	GATC	5 cut(s)	23, 143, 915, 1023, 1551
NgoMIV	GCCGGC	1 cut(s)	996
NlaIII	CATG	6 cut(s)	362, 464, 631, 1383, 1415, 1502
NlaIV	GGNNCC	1 cut(s)	1520
NmuCI	GTSAC	2 cut(s)	1029, 1429
NruI	TCGCGA	1 cut(s)	722
NspI	RCATGY	3 cut(s)	631, 1383, 1415
PaeI	GCATGC	1 cut(s)	1383
PagI	TCATGA	2 cut(s)	358, 1498
PasI	CCCWGGG	1 cut(s)	278
PciI	ACATGT	1 cut(s)	627
PdiI	GCCGGC	1 cut(s)	998
PdmI	GAANNNNTTC	1 cut(s)	354
PfeI	GAWTC	2 cut(s)	428, 797
PflMI	CCANNNNNTGG	1 cut(s)	1211
PfoI	TCCNGGA	1 cut(s)	1210
PkrI	GCNGC	5 cut(s)	19, 55, 225, 228, 745
PleI	GAGTC	3 cut(s)	448, 569, 1417
PpsI	GAGTC	3 cut(s)	448, 569, 1417
PscI	ACATGT	1 cut(s)	627
Psp6I	CCWGG	3 cut(s)	164, 277, 1210
PspFI	CCCAGC	2 cut(s)	1163, 1256
PspGI	CCWGG	3 cut(s)	164, 277, 1210
PspN4I	GGNNCC	1 cut(s)	1520
PspPI	GGNCC	3 cut(s)	955, 1202, 1519
PstI	CTGCAG	1 cut(s)	1680
PstNI	CAGNNNCTG	1 cut(s)	242
PsuI	RGATCY	1 cut(s)	143
RruI	TCGCGA	1 cut(s)	722
RsaI	GTAC	2 cut(s)	90, 1541
RsaNI	GTAC	2 cut(s)	89, 1540
RseI	CAYNNNNRTG	1 cut(s)	408
SaqAI	TTAA	4 cut(s)	651, 1227, 1416, 1635
SatI	GCNGC	5 cut(s)	18, 54, 224, 227, 744
Sau3AI	GATC	5 cut(s)	23, 143, 915, 1023, 1551
Sau96I	GGNCC	3 cut(s)	955, 1202, 1519
SchI	GAGTC	3 cut(s)	448, 570, 1417
ScrFI	CCNGG	3 cut(s)	166, 279, 1212
SfaNI	GCATC	4 cut(s)	571, 770, 886, 1261
SfcI	CTRYAG	1 cut(s)	1676
SinI	GGWCC	2 cut(s)	1202, 1519
SmiMI	CAYNNNNRTG	1 cut(s)	408
SmlI	CTYRAG	1 cut(s)	1184
SmoI	CTYRAG	1 cut(s)	1184
SphI	GCATGC	1 cut(s)	1383
SsiI	CCGC	8 cut(s)	17, 138, 210, 221, 224, 227, 794, 1623
SspMI	CTAG	7 cut(s)	107, 141, 432, 1067, 1076, 1577, 1604
StyD4I	CCNGG	3 cut(s)	164, 277, 1210
StyI	CCWWGG	1 cut(s)	84
TaaI	ACNGT	3 cut(s)	269, 1336, 1473
TaiI	ACGT	1 cut(s)	1592
TatI	WGTACW	1 cut(s)	1539
TauI	GCSGC	3 cut(s)	20, 226, 229
TfiI	GAWTC	2 cut(s)	428, 797
Tru1I	TTAA	4 cut(s)	651, 1227, 1416, 1635
Tru9I	TTAA	4 cut(s)	651, 1227, 1416, 1635
TscAI	CASTG	5 cut(s)	796, 998, 1038, 1339, 1434
TseFI	GTSAC	2 cut(s)	1029, 1429
TseI	GCWGC	2 cut(s)	53, 743
Tsp45I	GTSAC	2 cut(s)	1029, 1429
TspGWI	ACGGA	2 cut(s)	1114, 1697
TspRI	CASTG	5 cut(s)	796, 998, 1038, 1339, 1434
Van91I	CCANNNNNTGG	1 cut(s)	1211
VpaK11BI	GGWCC	2 cut(s)	1202, 1519
XapI	RAATTY	3 cut(s)	467, 511, 554
XbaI	TCTAGA	1 cut(s)	1066
XceI	RCATGY	3 cut(s)	631, 1383, 1415
XmnI	GAANNNNTTC	1 cut(s)	354
XspI	CTAG	7 cut(s)	107, 141, 432, 1067, 1076, 1577, 1604

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.