Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001141

Physical Location & Seq

Genomic Coordinates Forward (+)

60764872 .. 60781052

Gene Structure 16181 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG418900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1140 bp

ATGAACCCCCGATCGAACGAGAAAATCCCCACCGTGGCACCACTCTACCTCCGCCGGCCGGAAATGAAAGAATCGGTGGAAGCCGTGGAGCGGATCCTAGACTATGACTTCAAGAACAAGAGGCTTCTAGAGGAAGCTCTCATCCACCCCTCCTGCCGCATAAGCGACGCCGCCGTTTCGTATCAGCGGCTCGCGTTCCTCGGCGACACCGTTCTTGACCTCGCTGTAAGTAAATACCTCTTCCTTGCTTACCCTGGAATTCACCAAGGTGTGCTCACTGAGCTACGCTCCGCTAACGTCAGCACCAAGAAGTTCGCACGTGTGGCTGTGAGACATGGGCTTTATACCTACCTTCGCCGCACTGCAACTGGTGTTCTCGATCTTCAGGTTTGGGAGTTTACTGAAGCTGTAAGACGAGGAGAGGAGTCTGTAGAAGCCTGTAAAGTTCTTGCAGATATTGTGGAGTCTGTGGCTGGTGCTATTTATGTTGACTTGAATTTTGATCTGGAACAACTTTGGATGAAATTTAAGCATGTTTTGGAGCCTATAGTTACTCTTGAAGAGTTAGAGTTGCAGCAACAACCTCATCTTTTGACAGAGTTGCATCAACTTTGCCAGAAGCAGGGGAAGCATGTCAGTATCGAGTACGGGAGAGATAAGATGAAGAGTAATATTGATGGGAAGTGTGTTGCCTTGGGTTCAGCTGAACAGAAAGAAATTGCTAAGGTCAATGCTGCTGAGCTGGCTCTGAGTAAGTTGATGCAATCGATATGCATAAATGATGTGTCAGTTGAAGATATTGCTGGAATTGATGGGTTTTCTGCTGTTGAAAGAGCAAAAGATGAGTTGCATAAGCTTTGTGCCAAGAAGAAGTGGCCTAAACCAATTTACACCATTGAGCATGAAAAAGGTCCTCCGCATGATAAGATGTATCAATGGAGGGTAACTATAGGTGTGGTATATATGACGGGAGATGCAAAGTCAACAGTAAAAGATGCCAAGAATTCTGCAGCTTCTTCAATGATCCGCTCTTTGCAAGATCCTAAAAATTTTTTTGAAGAAAACAAGAGGACGGGAAATGTGCCAGGGAGGATAAGCTTACGTGTCAGGGTCCACAATGAAATAAACGTGGGGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016442 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031332 GO:0032296 GO:0032991 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DND1_DSRM Ribonuclease_3 dsrm

Protein Analysis

379

Amino Acids

42.79

Weight (kDa)

8.09

Isoelectric Point (pI)

45.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribonucleas_3_3	PF14622	39 - 167	1e-16	Ribonuclease-III-like
Ribonuclease_3	PF00636	62 - 164	1.1e-21	Ribonuclease III domain
dsrm	PF00035	279 - 345	2.8e-13	Double-stranded RNA binding motif
DND1_DSRM	PF14709	279 - 345	1.3e-11	double strand RNA binding domain from DEAD END PROTEIN 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20420
fragaria_vesca	FvH4_3g23250
malus_domestica	MD03G1196200.v1.1 MD11G1212500.v1.1
prunus_persica	Prupe.4G219200_v2.0.a1 Prupe.4G219200_v2.0.a1 Prupe.4G219400_v2.0.a1 Prupe.4G219400_v2.0.a1
pyrus_communis	pycom03g14830 pycom11g18750
rosa_chinensis	RchiOBHm_Chr5g0040511 RchiOBHm_Chr5g0040931 RchiOBHm_Chr5g0040941
rosa_laevigata	RLG00000033986 RLG00000034014 RLG00000034016 RLG00000034026
rosa_multiflora	Rmu_co8051550.1_g000001 Rmu_co8392905.1_g000001 Rmu_sc0002475.1_g000019 Rmu_sc0002848.1_g000007 Rmu_sc0006651.1_g000007 Rmu_sc0006651.1_g000008 Rmu_sc0008620.1_g000001
rosa_roxburghii	Rroxscaffold_1G00039580 Rroxscaffold_1G00039750 Rroxscaffold_1G00039760 Rroxscaffold_1G00040130 Rroxscaffold_1G00040850
rosa_rugosa	Rorug02G0350900 Rorug02G0350900 Rorug02G0351000 Rorug05G0185500 Rorug05G0188700 Rorug05G0188900 Rorug05G0188900
rosa_samantha	Rh2AG398700 Rh2BG409100 Rh2CG385500 Rh2CG540800 Rh2DG418900 Rh5AG272400 Rh5AG274300 Rh5AG274400 Rh5AG344200 Rh5BG276400 Rh5BG279300 Rh5BG279400 Rh5CG308900 Rh5CG311400 Rh5CG311600 Rh5DG284900 Rh5DG287500
rosa_wichuraiana	Rw2G032480 Rw5G025510 Rw5G025770 Rw5G025780 Rw5G025790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	37
AccBSI	CCGCTC	2 cut(s)	91, 1029
AccII	CGCG	1 cut(s)	194
AciI	CCGC	9 cut(s)	52, 91, 157, 171, 187, 291, 358, 917, 1027
AclWI	GGATC	4 cut(s)	88, 101, 1018, 1034
AcoI	YGGCCR	1 cut(s)	56
AcsI	RAATTY	5 cut(s)	258, 496, 524, 1003, 1048
AcuI	CTGAAG	2 cut(s)	368, 423
AcvI	CACGTG	1 cut(s)	320
AcyI	GRCGYC	1 cut(s)	168
AfaI	GTAC	1 cut(s)	647
AfiI	CCNNNNNNNGG	4 cut(s)	34, 58, 90, 622
AflIII	ACRYGT	2 cut(s)	319, 1102
AgsI	TTSAA	7 cut(s)	112, 496, 560, 794, 830, 1020, 1058
AjnI	CCWGG	2 cut(s)	253, 1084
AleI	CACNNNNGTG	1 cut(s)	267
AluBI	AGCT	8 cut(s)	137, 283, 407, 704, 742, 856, 1013, 1098
AluI	AGCT	8 cut(s)	137, 283, 407, 704, 742, 856, 1013, 1098
Alw21I	GWGCWC	1 cut(s)	276
Alw26I	GTCTC	1 cut(s)	325
AlwI	GGATC	4 cut(s)	88, 101, 1018, 1034
AoxI	GGCC	2 cut(s)	56, 875
ApeKI	GCWGC	3 cut(s)	574, 734, 1010
ApoI	RAATTY	5 cut(s)	258, 496, 524, 1003, 1048
ArsI	GACNNNNNNTTYG	2 cut(s)	482, 514
AspS9I	GGNCC	2 cut(s)	911, 1111
AsuHPI	GGTGA	1 cut(s)	254
AvaII	GGWCC	2 cut(s)	911, 1111
BamHI	GGATCC	1 cut(s)	93
BanI	GGYRCC	1 cut(s)	37
BbrPI	CACGTG	1 cut(s)	320
Bbv12I	GWGCWC	1 cut(s)	276
BbvI	GCAGC	3 cut(s)	586, 721, 1022
BccI	CCATC	2 cut(s)	671, 806
BceAI	ACGGC	2 cut(s)	68, 158
BciT130I	CCWGG	2 cut(s)	255, 1086
BcoDI	GTCTC	1 cut(s)	325
BfaI	CTAG	2 cut(s)	98, 128
BfmI	CTRYAG	4 cut(s)	429, 546, 948, 1008
BisI	GCNGC	7 cut(s)	157, 171, 188, 358, 575, 735, 1011
BlpI	GCTNAGC	1 cut(s)	738
BlsI	GCNGC	7 cut(s)	158, 172, 189, 359, 576, 736, 1012
Bme1390I	CCNGG	2 cut(s)	255, 1086
Bme18I	GGWCC	2 cut(s)	911, 1111
BmgT120I	GGNCC	2 cut(s)	911, 1111
BmiI	GGNNCC	4 cut(s)	39, 95, 543, 1112
BmrFI	CCNGG	2 cut(s)	255, 1086
BmsI	GCATC	4 cut(s)	613, 750, 964, 985
BplI	GAGNNNNNCTC	2 cut(s)	272, 304
Bpu10I	CCTNAGC	1 cut(s)	723
Bpu1102I	GCTNAGC	1 cut(s)	738
Bsa29I	ATCGAT	1 cut(s)	767
BsaAI	YACGTR	2 cut(s)	320, 1103
BsaHI	GRCGYC	1 cut(s)	168
BsaJI	CCNNGG	7 cut(s)	33, 84, 199, 253, 265, 693, 1085
BsaXI	ACNNNNNCTCC	2 cut(s)	33, 63
Bsc4I	CCNNNNNNNGG	4 cut(s)	34, 58, 90, 622
Bse118I	RCCGGY	1 cut(s)	54
Bse1I	ACTGG	1 cut(s)	373
BseBI	CCWGG	2 cut(s)	255, 1086
BseCI	ATCGAT	1 cut(s)	767
BseDI	CCNNGG	7 cut(s)	33, 84, 199, 253, 265, 693, 1085
BseGI	GGATG	2 cut(s)	141, 525
BseLI	CCNNNNNNNGG	4 cut(s)	34, 58, 90, 622
BseMII	CTCAG	3 cut(s)	270, 729, 740
BseNI	ACTGG	1 cut(s)	373
BseRI	GAGGAG	2 cut(s)	432, 437
BseX3I	CGGCCG	1 cut(s)	56
BseXI	GCAGC	3 cut(s)	586, 721, 1022
Bsh1236I	CGCG	1 cut(s)	194
Bsh1285I	CGRYCG	2 cut(s)	14, 59
BshFI	GGCC	2 cut(s)	58, 877
BshNI	GGYRCC	1 cut(s)	37
BshVI	ATCGAT	1 cut(s)	767
BsiEI	CGRYCG	2 cut(s)	14, 59
BsiHKAI	GWGCWC	1 cut(s)	276
BsiSI	CCGG	2 cut(s)	55, 59
BslI	CCNNNNNNNGG	4 cut(s)	34, 58, 90, 622
BsmAI	GTCTC	1 cut(s)	325
BsnI	GGCC	2 cut(s)	58, 877
Bsp1286I	GDGCHC	1 cut(s)	276
Bsp143I	GATC	6 cut(s)	11, 93, 379, 502, 1023, 1039
Bsp1720I	GCTNAGC	1 cut(s)	738
BspACI	CCGC	9 cut(s)	52, 91, 157, 171, 187, 291, 358, 917, 1027
BspANI	GGCC	2 cut(s)	58, 877
BspCNI	CTCAG	3 cut(s)	271, 730, 741
BspDI	ATCGAT	1 cut(s)	767
BspFNI	CGCG	1 cut(s)	194
BspLI	GGNNCC	4 cut(s)	39, 95, 543, 1112
BspMAI	CTGCAG	1 cut(s)	1012
BspPI	GGATC	4 cut(s)	88, 101, 1018, 1034
BspT107I	GGYRCC	1 cut(s)	37
BsrBI	CCGCTC	2 cut(s)	91, 1029
BsrFI	RCCGGY	1 cut(s)	54
BsrI	ACTGG	1 cut(s)	373
BssAI	RCCGGY	1 cut(s)	54
BssECI	CCNNGG	7 cut(s)	33, 84, 199, 253, 265, 693, 1085
BssMI	GATC	6 cut(s)	11, 93, 379, 502, 1023, 1039
BssNI	GRCGYC	1 cut(s)	168
BssT1I	CCWWGG	2 cut(s)	265, 693
Bst2UI	CCWGG	2 cut(s)	255, 1086
Bst4CI	ACNGT	3 cut(s)	34, 211, 988
Bst6I	CTCTTC	3 cut(s)	245, 555, 659
BstACI	GRCGYC	1 cut(s)	168
BstBAI	YACGTR	2 cut(s)	320, 1103
BstC8I	GCNNGC	3 cut(s)	56, 192, 744
BstDEI	CTNAG	4 cut(s)	279, 723, 738, 749
BstDSI	CCRYGG	2 cut(s)	33, 84
BstF5I	GGATG	2 cut(s)	141, 525
BstFNI	CGCG	1 cut(s)	194
BstKTI	GATC	6 cut(s)	14, 96, 382, 505, 1026, 1042
BstMAI	GTCTC	1 cut(s)	325
BstMBI	GATC	6 cut(s)	11, 93, 379, 502, 1023, 1039
BstMCI	CGRYCG	2 cut(s)	14, 59
BstMWI	GCNNNNNNNGC	5 cut(s)	162, 280, 323, 628, 743
BstNI	CCWGG	2 cut(s)	255, 1086
BstNSI	RCATGY	2 cut(s)	536, 635
BstSCI	CCNGG	2 cut(s)	253, 1084
BstSFI	CTRYAG	4 cut(s)	429, 546, 948, 1008
BstUI	CGCG	1 cut(s)	194
BstV1I	GCAGC	3 cut(s)	586, 721, 1022
BstX2I	RGATCY	2 cut(s)	93, 1039
BstYI	RGATCY	2 cut(s)	93, 1039
BstZI	CGGCCG	1 cut(s)	56
Bsu15I	ATCGAT	1 cut(s)	767
BsuRI	GGCC	2 cut(s)	58, 877
BsuTUI	ATCGAT	1 cut(s)	767
BtgI	CCRYGG	2 cut(s)	33, 84
BtsCI	GGATG	2 cut(s)	141, 525
BtsI	GCAGTG	1 cut(s)	360
BtsIMutI	CAGTG	2 cut(s)	276, 360
Cac8I	GCNNGC	3 cut(s)	56, 192, 744
Cfr10I	RCCGGY	1 cut(s)	54
Cfr13I	GGNCC	2 cut(s)	911, 1111
ClaI	ATCGAT	1 cut(s)	767
CseI	GACGC	1 cut(s)	176
Csp6I	GTAC	1 cut(s)	646
CviAII	CATG	5 cut(s)	335, 533, 632, 902, 920
CviQI	GTAC	1 cut(s)	646
DdeI	CTNAG	4 cut(s)	279, 723, 738, 749
DpnI	GATC	6 cut(s)	13, 95, 381, 504, 1025, 1041
DpnII	GATC	6 cut(s)	11, 93, 379, 502, 1023, 1039
EaeI	YGGCCR	1 cut(s)	56
EagI	CGGCCG	1 cut(s)	56
Eam1104I	CTCTTC	3 cut(s)	245, 555, 659
EarI	CTCTTC	3 cut(s)	245, 555, 659
EciI	GGCGGA	1 cut(s)	41
EclXI	CGGCCG	1 cut(s)	56
Eco130I	CCWWGG	2 cut(s)	265, 693
Eco47I	GGWCC	2 cut(s)	911, 1111
Eco52I	CGGCCG	1 cut(s)	56
Eco57I	CTGAAG	2 cut(s)	368, 423
Eco72I	CACGTG	1 cut(s)	320
EcoO109I	RGGNCCY	1 cut(s)	911
EcoRI	GAATTC	2 cut(s)	258, 1003
EcoRII	CCWGG	2 cut(s)	253, 1084
EcoT14I	CCWWGG	2 cut(s)	265, 693
EcoT22I	ATGCAT	1 cut(s)	776
ErhI	CCWWGG	2 cut(s)	265, 693
FaeI	CATG	5 cut(s)	338, 536, 635, 905, 923
FatI	CATG	5 cut(s)	334, 532, 631, 901, 919
Fnu4HI	GCNGC	7 cut(s)	157, 171, 188, 358, 575, 735, 1011
FokI	GGATG	2 cut(s)	128, 532
Fsp4HI	GCNGC	7 cut(s)	157, 171, 188, 358, 575, 735, 1011
FspBI	CTAG	2 cut(s)	98, 128
GluI	GCNGC	7 cut(s)	157, 171, 188, 358, 575, 735, 1011
HaeIII	GGCC	2 cut(s)	58, 877
HapII	CCGG	2 cut(s)	55, 59
HgaI	GACGC	1 cut(s)	176
Hin1I	GRCGYC	1 cut(s)	168
Hin1II	CATG	5 cut(s)	338, 536, 635, 905, 923
HincII	GTYRAC	2 cut(s)	490, 984
HindII	GTYRAC	2 cut(s)	490, 984
HindIII	AAGCTT	2 cut(s)	854, 1096
HinfI	GANTC	3 cut(s)	71, 425, 464
HpaII	CCGG	2 cut(s)	55, 59
HphI	GGTGA	1 cut(s)	254
Hpy166II	GTNNAC	4 cut(s)	399, 490, 984, 1114
Hpy188I	TCNGA	1 cut(s)	750
Hpy188III	TCNNGA	7 cut(s)	112, 128, 215, 377, 506, 557, 1137
Hpy8I	GTNNAC	4 cut(s)	399, 490, 984, 1114
Hpy99I	CGWCG	1 cut(s)	170
HpyAV	CCTTC	1 cut(s)	362
HpyCH4III	ACNGT	3 cut(s)	34, 211, 988
HpyCH4IV	ACGT	4 cut(s)	297, 319, 1102, 1128
HpyF10VI	GCNNNNNNNGC	5 cut(s)	162, 280, 323, 628, 743
HpyF3I	CTNAG	4 cut(s)	279, 723, 738, 749
HpySE526I	ACGT	4 cut(s)	297, 319, 1102, 1128
Hsp92I	GRCGYC	1 cut(s)	168
Hsp92II	CATG	5 cut(s)	338, 536, 635, 905, 923
KroI	GCCGGC	1 cut(s)	54
KroNI	GCCGGC	1 cut(s)	56
Kzo9I	GATC	6 cut(s)	11, 93, 379, 502, 1023, 1039
LmnI	GCTCC	3 cut(s)	88, 293, 541
Lsp1109I	GCAGC	3 cut(s)	586, 721, 1022
LweI	GCATC	4 cut(s)	613, 750, 964, 985
MaeI	CTAG	2 cut(s)	98, 128
MaeII	ACGT	4 cut(s)	297, 319, 1102, 1128
MaeIII	GTNAC	2 cut(s)	550, 943
MalI	GATC	6 cut(s)	13, 95, 381, 504, 1025, 1041
MbiI	CCGCTC	2 cut(s)	91, 1029
MboI	GATC	6 cut(s)	11, 93, 379, 502, 1023, 1039
MboII	GAAGA	8 cut(s)	232, 374, 572, 676, 806, 880, 1008, 1070
MflI	RGATCY	2 cut(s)	93, 1039
MhlI	GDGCHC	1 cut(s)	276
MluCI	AATT	8 cut(s)	258, 496, 524, 717, 807, 885, 1003, 1048
MlyI	GAGTC	2 cut(s)	434, 473
Mph1103I	ATGCAT	1 cut(s)	776
MroNI	GCCGGC	1 cut(s)	54
MseI	TTAA	1 cut(s)	528
MslI	CAYNNNNRTG	1 cut(s)	267
MspA1I	CMGCKG	2 cut(s)	187, 704
MspI	CCGG	2 cut(s)	55, 59
MspR9I	CCNGG	2 cut(s)	255, 1086
MvaI	CCWGG	2 cut(s)	255, 1086
MvnI	CGCG	1 cut(s)	194
MwoI	GCNNNNNNNGC	5 cut(s)	162, 280, 323, 628, 743
NaeI	GCCGGC	1 cut(s)	56
NdeII	GATC	6 cut(s)	11, 93, 379, 502, 1023, 1039
NgoMIV	GCCGGC	1 cut(s)	54
NlaIII	CATG	5 cut(s)	338, 536, 635, 905, 923
NlaIV	GGNNCC	4 cut(s)	39, 95, 543, 1112
NmeAIII	GCCGAG	1 cut(s)	180
NsiI	ATGCAT	1 cut(s)	776
NspI	RCATGY	2 cut(s)	536, 635
OliI	CACNNNNGTG	1 cut(s)	267
PcsI	WCGNNNNNNNCGW	1 cut(s)	207
PdiI	GCCGGC	1 cut(s)	56
PfeI	GAWTC	1 cut(s)	71
PkrI	GCNGC	7 cut(s)	158, 172, 189, 359, 576, 736, 1012
Ple19I	CGATCG	1 cut(s)	14
PleI	GAGTC	2 cut(s)	433, 472
PmaCI	CACGTG	1 cut(s)	320
PmlI	CACGTG	1 cut(s)	320
PpsI	GAGTC	2 cut(s)	433, 472
Ppu21I	YACGTR	2 cut(s)	320, 1103
PpuMI	RGGWCCY	1 cut(s)	911
Psp5II	RGGWCCY	1 cut(s)	911
Psp6I	CCWGG	2 cut(s)	253, 1084
PspCI	CACGTG	1 cut(s)	320
PspGI	CCWGG	2 cut(s)	253, 1084
PspN4I	GGNNCC	4 cut(s)	39, 95, 543, 1112
PspPI	GGNCC	2 cut(s)	911, 1111
PspPPI	RGGWCCY	1 cut(s)	911
PstI	CTGCAG	1 cut(s)	1012
PsuI	RGATCY	2 cut(s)	93, 1039
PvuI	CGATCG	1 cut(s)	14
PvuII	CAGCTG	1 cut(s)	704
RsaI	GTAC	1 cut(s)	647
RsaNI	GTAC	1 cut(s)	646
RseI	CAYNNNNRTG	1 cut(s)	267
SaqAI	TTAA	1 cut(s)	528
SatI	GCNGC	7 cut(s)	157, 171, 188, 358, 575, 735, 1011
Sau3AI	GATC	6 cut(s)	11, 93, 379, 502, 1023, 1039
Sau96I	GGNCC	2 cut(s)	911, 1111
SchI	GAGTC	2 cut(s)	434, 473
ScrFI	CCNGG	2 cut(s)	255, 1086
SduI	GDGCHC	1 cut(s)	276
SfaNI	GCATC	4 cut(s)	613, 750, 964, 985
SfcI	CTRYAG	4 cut(s)	429, 546, 948, 1008
SinI	GGWCC	2 cut(s)	911, 1111
SmiMI	CAYNNNNRTG	1 cut(s)	267
Sse9I	AATT	8 cut(s)	258, 496, 524, 717, 807, 885, 1003, 1048
SsiI	CCGC	9 cut(s)	52, 91, 157, 171, 187, 291, 358, 917, 1027
SspI	AATATT	1 cut(s)	673
SspMI	CTAG	2 cut(s)	98, 128
StyD4I	CCNGG	2 cut(s)	253, 1084
StyI	CCWWGG	2 cut(s)	265, 693
TaaI	ACNGT	3 cut(s)	34, 211, 988
TaiI	ACGT	4 cut(s)	300, 322, 1105, 1131
TaqI	TCGA	4 cut(s)	14, 378, 642, 767
TasI	AATT	8 cut(s)	258, 496, 524, 717, 807, 885, 1003, 1048
TauI	GCSGC	4 cut(s)	159, 173, 190, 360
TfiI	GAWTC	1 cut(s)	71
Tru1I	TTAA	1 cut(s)	528
Tru9I	TTAA	1 cut(s)	528
TscAI	CASTG	2 cut(s)	283, 367
TseI	GCWGC	3 cut(s)	574, 734, 1010
TspDTI	ATGAA	6 cut(s)	17, 80, 536, 677, 918, 1134
TspRI	CASTG	2 cut(s)	283, 367
VpaK11BI	GGWCC	2 cut(s)	911, 1111
XapI	RAATTY	5 cut(s)	258, 496, 524, 1003, 1048
XbaI	TCTAGA	1 cut(s)	127
XceI	RCATGY	2 cut(s)	536, 635
XspI	CTAG	2 cut(s)	98, 128
Zsp2I	ATGCAT	1 cut(s)	776

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.