Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0001141

Physical Location & Seq

Genomic Coordinates Forward (+)

52457645 .. 52460772

Gene Structure 3128 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG385500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGTCTTCAGGGAAGCTAATTTGGTCGCAGATCATTTTGCTATCTCAGGACAAAGATACTATCAAAGTTGTATTTGGTTTAACAATTTTCCTACTGATTCTCCAAAACTTTTCCACCAGAATCTTTTGCAAGATGAACCCCCGATCGAACGAGAAAATCCCCACAGTGGCACCACTCTACCTCCGCCGGCCGGAAATGAAAGAATCGGTGGAAGCCGTGGAGCGGATCCTAGACTATGACTTCAAGAACAAGAGGCTTCTAGAGGAAGCTCTCATCCACCCCTCCTGCCGCATAAGCGACGCCGCCGTTTCGTATCAGCGGCTCGCGTTCCTCGGCGACACCGTTCTTGACCTCGCTGTAAGTAAATACCTCTTCCTTGCTTACCCTGGAATTCACCAAGGTGTCCTCACTGAGCTACGCTCCGCTAACGTCAGCACCAAGAAGTTCGCACGTGTGGCTGTGAGACATGGGCTTTATACCTACCTTCGCCGCACTGCAACTGGTGTTCTCGATCGTCAGGTTTGGGAGTTTACTGAAGCTGTAAGACGAGGAGAGGAGTCTGTAGAAGCCTGTAAAGTTCTTGCAGATATTGTGGAGTCTGTGGCTGGTGCTATTTATGTTGACTTGAATTTTGATCTGGAACAACTTTGGATGAAATTTAAGCATGTTTTGGAGCCTATAGTTACTCTTGAAGAGTTAGAGTTGCAGCAACAACCTCATCTTGAGACAGAGTTGCATCAACTTTGCCAGAAGCAGTGGAAGCATGTCAGTATCGAGTACGGGAGAGATAAGATGAAGAGTAATATTGATGGGAAGTGTGTTGCCTTGGGTTCGGCTGAACAGAAAGAAATTGCTAAGGTCAATGCTGCTGAGCTGGCTCTGAGTAAGTTGATGCAATCGATATGCATAAATGATGTGTCAGTTGAAGATATTGCTGGAATTGATGCGTTTTCTGCTGTTGAAAGAGCAAAAGATGAGTTGCATAAGCTTTGTGCCAAGAAGAAGTGGCCTAAACCAATTTACACCATTGAGCATGAAAAAGGTCCTCCGCATGATAAGATGTATCAATGGAGGGTAACTATAGGTGTGGTATATATGACGGGAGATGCAAAGTCAACAGTGAAAGATGCCAAGAATTCTGCAGCTTCTTCAATGATCCGCTCTTTGCAAGACCCTAAAAATGTACGTATGAAACGCCCATGTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016442 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031332 GO:0032296 GO:0032991 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DND1_DSRM Ribonuclease_3 dsrm

Protein Analysis

402

Amino Acids

45.67

Weight (kDa)

8.71

Isoelectric Point (pI)

45.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribonucleas_3_3	PF14622	83 - 212	8.8e-17	Ribonuclease-III-like
Ribonuclease_3	PF00636	106 - 208	1.6e-22	Ribonuclease III domain
dsrm	PF00035	323 - 389	3e-13	Double-stranded RNA binding motif
DND1_DSRM	PF14709	323 - 389	1.4e-11	double strand RNA binding domain from DEAD END PROTEIN 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20420
fragaria_vesca	FvH4_3g23250
malus_domestica	MD03G1196200.v1.1 MD11G1212500.v1.1
prunus_persica	Prupe.4G219200_v2.0.a1 Prupe.4G219200_v2.0.a1 Prupe.4G219400_v2.0.a1 Prupe.4G219400_v2.0.a1
pyrus_communis	pycom03g14830 pycom11g18750
rosa_chinensis	RchiOBHm_Chr5g0040511 RchiOBHm_Chr5g0040931 RchiOBHm_Chr5g0040941
rosa_laevigata	RLG00000033986 RLG00000034014 RLG00000034016 RLG00000034026
rosa_multiflora	Rmu_co8051550.1_g000001 Rmu_co8392905.1_g000001 Rmu_sc0002475.1_g000019 Rmu_sc0002848.1_g000007 Rmu_sc0006651.1_g000007 Rmu_sc0006651.1_g000008 Rmu_sc0008620.1_g000001
rosa_roxburghii	Rroxscaffold_1G00039580 Rroxscaffold_1G00039750 Rroxscaffold_1G00039760 Rroxscaffold_1G00040130 Rroxscaffold_1G00040850
rosa_rugosa	Rorug02G0350900 Rorug02G0350900 Rorug02G0351000 Rorug05G0185500 Rorug05G0188700 Rorug05G0188900 Rorug05G0188900
rosa_samantha	Rh2AG398700 Rh2BG409100 Rh2CG385500 Rh2CG540800 Rh2DG418900 Rh5AG272400 Rh5AG274300 Rh5AG274400 Rh5AG344200 Rh5BG276400 Rh5BG279300 Rh5BG279400 Rh5CG308900 Rh5CG311400 Rh5CG311600 Rh5DG284900 Rh5DG287500
rosa_wichuraiana	Rw2G032480 Rw5G025510 Rw5G025770 Rw5G025780 Rw5G025790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	169
AccBSI	CCGCTC	2 cut(s)	223, 1161
AccII	CGCG	1 cut(s)	326
AciI	CCGC	9 cut(s)	184, 223, 289, 303, 319, 423, 490, 1049, 1159
AclWI	GGATC	3 cut(s)	220, 233, 1150
AcoI	YGGCCR	1 cut(s)	188
AcsI	RAATTY	4 cut(s)	390, 628, 656, 1135
AcuI	CTGAAG	1 cut(s)	555
AcvI	CACGTG	1 cut(s)	452
AcyI	GRCGYC	1 cut(s)	300
AfaI	GTAC	2 cut(s)	779, 1185
AfiI	CCNNNNNNNGG	3 cut(s)	166, 190, 222
AflIII	ACRYGT	1 cut(s)	451
AgsI	TTSAA	6 cut(s)	244, 628, 692, 926, 962, 1152
AjnI	CCWGG	1 cut(s)	385
AleI	CACNNNNGTG	1 cut(s)	399
AluBI	AGCT	7 cut(s)	16, 269, 415, 539, 874, 988, 1145
AluI	AGCT	7 cut(s)	16, 269, 415, 539, 874, 988, 1145
Alw26I	GTCTC	2 cut(s)	457, 719
AlwI	GGATC	3 cut(s)	220, 233, 1150
AoxI	GGCC	2 cut(s)	188, 1007
ApeKI	GCWGC	3 cut(s)	706, 866, 1142
ApoI	RAATTY	4 cut(s)	390, 628, 656, 1135
ArsI	GACNNNNNNTTYG	2 cut(s)	614, 646
AspS9I	GGNCC	1 cut(s)	1043
AsuHPI	GGTGA	1 cut(s)	386
AvaII	GGWCC	1 cut(s)	1043
BamHI	GGATCC	1 cut(s)	225
BanI	GGYRCC	1 cut(s)	169
BbrPI	CACGTG	1 cut(s)	452
BbvI	GCAGC	3 cut(s)	718, 853, 1154
BccI	CCATC	1 cut(s)	803
BceAI	ACGGC	2 cut(s)	200, 290
BciT130I	CCWGG	1 cut(s)	387
BcoDI	GTCTC	2 cut(s)	457, 719
BfaI	CTAG	2 cut(s)	230, 260
BfmI	CTRYAG	4 cut(s)	561, 678, 1080, 1140
BisI	GCNGC	7 cut(s)	289, 303, 320, 490, 707, 867, 1143
BlpI	GCTNAGC	1 cut(s)	870
BlsI	GCNGC	7 cut(s)	290, 304, 321, 491, 708, 868, 1144
Bme1390I	CCNGG	1 cut(s)	387
Bme18I	GGWCC	1 cut(s)	1043
BmgT120I	GGNCC	1 cut(s)	1043
BmiI	GGNNCC	3 cut(s)	171, 227, 675
BmrFI	CCNGG	1 cut(s)	387
BmsI	GCATC	5 cut(s)	745, 882, 934, 1096, 1117
BplI	GAGNNNNNCTC	2 cut(s)	404, 436
Bpu10I	CCTNAGC	1 cut(s)	855
Bpu1102I	GCTNAGC	1 cut(s)	870
BpuEI	CTTGAG	1 cut(s)	743
Bsa29I	ATCGAT	1 cut(s)	899
BsaAI	YACGTR	2 cut(s)	452, 1187
BsaHI	GRCGYC	1 cut(s)	300
BsaJI	CCNNGG	5 cut(s)	216, 331, 385, 397, 825
BsaXI	ACNNNNNCTCC	4 cut(s)	84, 114, 165, 195
Bsc4I	CCNNNNNNNGG	3 cut(s)	166, 190, 222
Bse118I	RCCGGY	1 cut(s)	186
Bse1I	ACTGG	1 cut(s)	505
BseBI	CCWGG	1 cut(s)	387
BseCI	ATCGAT	1 cut(s)	899
BseDI	CCNNGG	5 cut(s)	216, 331, 385, 397, 825
BseGI	GGATG	2 cut(s)	273, 657
BseLI	CCNNNNNNNGG	3 cut(s)	166, 190, 222
BseMII	CTCAG	4 cut(s)	59, 402, 861, 872
BseNI	ACTGG	1 cut(s)	505
BseRI	GAGGAG	2 cut(s)	564, 569
BseX3I	CGGCCG	1 cut(s)	188
BseXI	GCAGC	3 cut(s)	718, 853, 1154
Bsh1236I	CGCG	1 cut(s)	326
Bsh1285I	CGRYCG	3 cut(s)	146, 191, 514
BshFI	GGCC	2 cut(s)	190, 1009
BshNI	GGYRCC	1 cut(s)	169
BshVI	ATCGAT	1 cut(s)	899
BsiEI	CGRYCG	3 cut(s)	146, 191, 514
BsiSI	CCGG	2 cut(s)	187, 191
BslI	CCNNNNNNNGG	3 cut(s)	166, 190, 222
BsmAI	GTCTC	2 cut(s)	457, 719
BsnI	GGCC	2 cut(s)	190, 1009
Bsp143I	GATC	6 cut(s)	30, 143, 225, 511, 634, 1155
Bsp1720I	GCTNAGC	1 cut(s)	870
BspACI	CCGC	9 cut(s)	184, 223, 289, 303, 319, 423, 490, 1049, 1159
BspANI	GGCC	2 cut(s)	190, 1009
BspCNI	CTCAG	4 cut(s)	58, 403, 862, 873
BspDI	ATCGAT	1 cut(s)	899
BspFNI	CGCG	1 cut(s)	326
BspLI	GGNNCC	3 cut(s)	171, 227, 675
BspMAI	CTGCAG	1 cut(s)	1144
BspPI	GGATC	3 cut(s)	220, 233, 1150
BspT107I	GGYRCC	1 cut(s)	169
BsrBI	CCGCTC	2 cut(s)	223, 1161
BsrFI	RCCGGY	1 cut(s)	186
BsrI	ACTGG	1 cut(s)	505
BssAI	RCCGGY	1 cut(s)	186
BssECI	CCNNGG	5 cut(s)	216, 331, 385, 397, 825
BssMI	GATC	6 cut(s)	30, 143, 225, 511, 634, 1155
BssNI	GRCGYC	1 cut(s)	300
BssT1I	CCWWGG	2 cut(s)	397, 825
Bst2UI	CCWGG	1 cut(s)	387
Bst4CI	ACNGT	3 cut(s)	166, 343, 1120
Bst6I	CTCTTC	3 cut(s)	377, 687, 791
BstACI	GRCGYC	1 cut(s)	300
BstBAI	YACGTR	2 cut(s)	452, 1187
BstC8I	GCNNGC	3 cut(s)	188, 324, 876
BstDEI	CTNAG	5 cut(s)	45, 411, 855, 870, 881
BstDSI	CCRYGG	1 cut(s)	216
BstF5I	GGATG	2 cut(s)	273, 657
BstFNI	CGCG	1 cut(s)	326
BstKTI	GATC	6 cut(s)	33, 146, 228, 514, 637, 1158
BstMAI	GTCTC	2 cut(s)	457, 719
BstMBI	GATC	6 cut(s)	30, 143, 225, 511, 634, 1155
BstMCI	CGRYCG	3 cut(s)	146, 191, 514
BstMWI	GCNNNNNNNGC	5 cut(s)	294, 455, 760, 875, 953
BstNI	CCWGG	1 cut(s)	387
BstNSI	RCATGY	2 cut(s)	668, 767
BstSCI	CCNGG	1 cut(s)	385
BstSFI	CTRYAG	4 cut(s)	561, 678, 1080, 1140
BstSNI	TACGTA	1 cut(s)	1187
BstUI	CGCG	1 cut(s)	326
BstV1I	GCAGC	3 cut(s)	718, 853, 1154
BstX2I	RGATCY	1 cut(s)	225
BstYI	RGATCY	1 cut(s)	225
BstZI	CGGCCG	1 cut(s)	188
Bsu15I	ATCGAT	1 cut(s)	899
BsuRI	GGCC	2 cut(s)	190, 1009
BsuTUI	ATCGAT	1 cut(s)	899
BtgI	CCRYGG	1 cut(s)	216
BtsCI	GGATG	2 cut(s)	273, 657
BtsI	GCAGTG	2 cut(s)	492, 761
BtsIMutI	CAGTG	5 cut(s)	171, 408, 492, 761, 1125
Cac8I	GCNNGC	3 cut(s)	188, 324, 876
Cfr10I	RCCGGY	1 cut(s)	186
Cfr13I	GGNCC	1 cut(s)	1043
ClaI	ATCGAT	1 cut(s)	899
CseI	GACGC	1 cut(s)	308
Csp6I	GTAC	2 cut(s)	778, 1184
CviAII	CATG	6 cut(s)	467, 665, 764, 1034, 1052, 1200
CviQI	GTAC	2 cut(s)	778, 1184
DdeI	CTNAG	5 cut(s)	45, 411, 855, 870, 881
DpnI	GATC	6 cut(s)	32, 145, 227, 513, 636, 1157
DpnII	GATC	6 cut(s)	30, 143, 225, 511, 634, 1155
EaeI	YGGCCR	1 cut(s)	188
EagI	CGGCCG	1 cut(s)	188
Eam1104I	CTCTTC	3 cut(s)	377, 687, 791
EarI	CTCTTC	3 cut(s)	377, 687, 791
EciI	GGCGGA	1 cut(s)	173
EclXI	CGGCCG	1 cut(s)	188
Eco105I	TACGTA	1 cut(s)	1187
Eco130I	CCWWGG	2 cut(s)	397, 825
Eco47I	GGWCC	1 cut(s)	1043
Eco52I	CGGCCG	1 cut(s)	188
Eco57I	CTGAAG	1 cut(s)	555
Eco72I	CACGTG	1 cut(s)	452
EcoO109I	RGGNCCY	1 cut(s)	1043
EcoRI	GAATTC	2 cut(s)	390, 1135
EcoRII	CCWGG	1 cut(s)	385
EcoT14I	CCWWGG	2 cut(s)	397, 825
EcoT22I	ATGCAT	1 cut(s)	908
ErhI	CCWWGG	2 cut(s)	397, 825
FaeI	CATG	6 cut(s)	470, 668, 767, 1037, 1055, 1203
FatI	CATG	6 cut(s)	466, 664, 763, 1033, 1051, 1199
Fnu4HI	GCNGC	7 cut(s)	289, 303, 320, 490, 707, 867, 1143
FokI	GGATG	2 cut(s)	260, 664
Fsp4HI	GCNGC	7 cut(s)	289, 303, 320, 490, 707, 867, 1143
FspBI	CTAG	2 cut(s)	230, 260
GluI	GCNGC	7 cut(s)	289, 303, 320, 490, 707, 867, 1143
HaeIII	GGCC	2 cut(s)	190, 1009
HapII	CCGG	2 cut(s)	187, 191
HgaI	GACGC	1 cut(s)	308
Hin1I	GRCGYC	1 cut(s)	300
Hin1II	CATG	6 cut(s)	470, 668, 767, 1037, 1055, 1203
HincII	GTYRAC	2 cut(s)	622, 1116
HindII	GTYRAC	2 cut(s)	622, 1116
HindIII	AAGCTT	1 cut(s)	986
HinfI	GANTC	5 cut(s)	97, 120, 203, 557, 596
HpaII	CCGG	2 cut(s)	187, 191
HphI	GGTGA	1 cut(s)	386
Hpy166II	GTNNAC	3 cut(s)	531, 622, 1116
Hpy188I	TCNGA	1 cut(s)	882
Hpy188III	TCNNGA	8 cut(s)	47, 244, 260, 347, 509, 638, 689, 722
Hpy8I	GTNNAC	3 cut(s)	531, 622, 1116
Hpy99I	CGWCG	1 cut(s)	302
HpyAV	CCTTC	1 cut(s)	494
HpyCH4III	ACNGT	3 cut(s)	166, 343, 1120
HpyCH4IV	ACGT	3 cut(s)	429, 451, 1186
HpyF10VI	GCNNNNNNNGC	5 cut(s)	294, 455, 760, 875, 953
HpyF3I	CTNAG	5 cut(s)	45, 411, 855, 870, 881
HpySE526I	ACGT	3 cut(s)	429, 451, 1186
Hsp92I	GRCGYC	1 cut(s)	300
Hsp92II	CATG	6 cut(s)	470, 668, 767, 1037, 1055, 1203
KroI	GCCGGC	1 cut(s)	186
KroNI	GCCGGC	1 cut(s)	188
Kzo9I	GATC	6 cut(s)	30, 143, 225, 511, 634, 1155
LmnI	GCTCC	3 cut(s)	220, 425, 673
Lsp1109I	GCAGC	3 cut(s)	718, 853, 1154
LweI	GCATC	5 cut(s)	745, 882, 934, 1096, 1117
MaeI	CTAG	2 cut(s)	230, 260
MaeII	ACGT	3 cut(s)	429, 451, 1186
MaeIII	GTNAC	2 cut(s)	682, 1075
MalI	GATC	6 cut(s)	32, 145, 227, 513, 636, 1157
MbiI	CCGCTC	2 cut(s)	223, 1161
MboI	GATC	6 cut(s)	30, 143, 225, 511, 634, 1155
MboII	GAAGA	6 cut(s)	364, 704, 808, 938, 1012, 1140
MflI	RGATCY	1 cut(s)	225
MluCI	AATT	9 cut(s)	18, 84, 390, 628, 656, 849, 939, 1017, 1135
MlyI	GAGTC	2 cut(s)	566, 605
Mph1103I	ATGCAT	1 cut(s)	908
MroNI	GCCGGC	1 cut(s)	186
MseI	TTAA	2 cut(s)	80, 660
MslI	CAYNNNNRTG	1 cut(s)	399
MspA1I	CMGCKG	1 cut(s)	319
MspI	CCGG	2 cut(s)	187, 191
MspR9I	CCNGG	1 cut(s)	387
MvaI	CCWGG	1 cut(s)	387
MvnI	CGCG	1 cut(s)	326
MwoI	GCNNNNNNNGC	5 cut(s)	294, 455, 760, 875, 953
NaeI	GCCGGC	1 cut(s)	188
NdeII	GATC	6 cut(s)	30, 143, 225, 511, 634, 1155
NgoMIV	GCCGGC	1 cut(s)	186
NlaIII	CATG	6 cut(s)	470, 668, 767, 1037, 1055, 1203
NlaIV	GGNNCC	3 cut(s)	171, 227, 675
NmeAIII	GCCGAG	1 cut(s)	312
NsiI	ATGCAT	1 cut(s)	908
NspI	RCATGY	2 cut(s)	668, 767
OliI	CACNNNNGTG	1 cut(s)	399
PcsI	WCGNNNNNNNCGW	1 cut(s)	339
PdiI	GCCGGC	1 cut(s)	188
PfeI	GAWTC	3 cut(s)	97, 120, 203
PkrI	GCNGC	7 cut(s)	290, 304, 321, 491, 708, 868, 1144
Ple19I	CGATCG	2 cut(s)	146, 514
PleI	GAGTC	2 cut(s)	565, 604
PmaCI	CACGTG	1 cut(s)	452
PmlI	CACGTG	1 cut(s)	452
PpsI	GAGTC	2 cut(s)	565, 604
Ppu21I	YACGTR	2 cut(s)	452, 1187
PpuMI	RGGWCCY	1 cut(s)	1043
Psp5II	RGGWCCY	1 cut(s)	1043
Psp6I	CCWGG	1 cut(s)	385
PspCI	CACGTG	1 cut(s)	452
PspGI	CCWGG	1 cut(s)	385
PspN4I	GGNNCC	3 cut(s)	171, 227, 675
PspPI	GGNCC	1 cut(s)	1043
PspPPI	RGGWCCY	1 cut(s)	1043
PstI	CTGCAG	1 cut(s)	1144
PsuI	RGATCY	1 cut(s)	225
PvuI	CGATCG	2 cut(s)	146, 514
RsaI	GTAC	2 cut(s)	779, 1185
RsaNI	GTAC	2 cut(s)	778, 1184
RseI	CAYNNNNRTG	1 cut(s)	399
SaqAI	TTAA	2 cut(s)	80, 660
SatI	GCNGC	7 cut(s)	289, 303, 320, 490, 707, 867, 1143
Sau3AI	GATC	6 cut(s)	30, 143, 225, 511, 634, 1155
Sau96I	GGNCC	1 cut(s)	1043
SchI	GAGTC	2 cut(s)	566, 605
ScrFI	CCNGG	1 cut(s)	387
SfaNI	GCATC	5 cut(s)	745, 882, 934, 1096, 1117
SfcI	CTRYAG	4 cut(s)	561, 678, 1080, 1140
SinI	GGWCC	1 cut(s)	1043
SmiMI	CAYNNNNRTG	1 cut(s)	399
SmlI	CTYRAG	1 cut(s)	722
SmoI	CTYRAG	1 cut(s)	722
SnaBI	TACGTA	1 cut(s)	1187
Sse9I	AATT	9 cut(s)	18, 84, 390, 628, 656, 849, 939, 1017, 1135
SsiI	CCGC	9 cut(s)	184, 223, 289, 303, 319, 423, 490, 1049, 1159
SspI	AATATT	1 cut(s)	805
SspMI	CTAG	2 cut(s)	230, 260
StyD4I	CCNGG	1 cut(s)	385
StyI	CCWWGG	2 cut(s)	397, 825
TaaI	ACNGT	3 cut(s)	166, 343, 1120
TaiI	ACGT	3 cut(s)	432, 454, 1189
TaqI	TCGA	4 cut(s)	146, 510, 774, 899
TasI	AATT	9 cut(s)	18, 84, 390, 628, 656, 849, 939, 1017, 1135
TauI	GCSGC	4 cut(s)	291, 305, 322, 492
TfiI	GAWTC	3 cut(s)	97, 120, 203
Tru1I	TTAA	2 cut(s)	80, 660
Tru9I	TTAA	2 cut(s)	80, 660
TscAI	CASTG	5 cut(s)	171, 415, 499, 761, 1125
TseI	GCWGC	3 cut(s)	706, 866, 1142
TspDTI	ATGAA	6 cut(s)	149, 212, 668, 809, 1050, 1205
TspRI	CASTG	5 cut(s)	171, 415, 499, 761, 1125
VpaK11BI	GGWCC	1 cut(s)	1043
XapI	RAATTY	4 cut(s)	390, 628, 656, 1135
XbaI	TCTAGA	1 cut(s)	259
XceI	RCATGY	2 cut(s)	668, 767
XspI	CTAG	2 cut(s)	230, 260
Zsp2I	ATGCAT	1 cut(s)	908

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.