Transcription factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 177 |
| AccI | GTMKAC | 1 cut(s) | 151 |
| AciI | CCGC | 2 cut(s) | 145, 177 |
| AcsI | RAATTY | 1 cut(s) | 43 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 141 |
| AluBI | AGCT | 1 cut(s) | 139 |
| AluI | AGCT | 1 cut(s) | 139 |
| Alw21I | GWGCWC | 1 cut(s) | 141 |
| AoxI | GGCC | 1 cut(s) | 123 |
| ApoI | RAATTY | 1 cut(s) | 43 |
| AspS9I | GGNCC | 1 cut(s) | 124 |
| BanII | GRGCYC | 1 cut(s) | 141 |
| Bbv12I | GWGCWC | 1 cut(s) | 141 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 60 |
| BisI | GCNGC | 1 cut(s) | 178 |
| BlsI | GCNGC | 1 cut(s) | 179 |
| BmgT120I | GGNCC | 1 cut(s) | 124 |
| BpmI | CTGGAG | 1 cut(s) | 182 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 141 |
| Bse118I | RCCGGY | 1 cut(s) | 59 |
| Bse1I | ACTGG | 1 cut(s) | 16 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 141 |
| BseNI | ACTGG | 1 cut(s) | 16 |
| BseRI | GAGGAG | 2 cut(s) | 119, 122 |
| BshFI | GGCC | 1 cut(s) | 125 |
| BsiHKAI | GWGCWC | 1 cut(s) | 141 |
| BsiSI | CCGG | 2 cut(s) | 60, 142 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 141 |
| BsnI | GGCC | 1 cut(s) | 125 |
| Bsp1286I | GDGCHC | 1 cut(s) | 141 |
| BspACI | CCGC | 2 cut(s) | 145, 177 |
| BspANI | GGCC | 1 cut(s) | 125 |
| BsrBI | CCGCTC | 1 cut(s) | 177 |
| BsrFI | RCCGGY | 1 cut(s) | 59 |
| BsrI | ACTGG | 1 cut(s) | 16 |
| BssAI | RCCGGY | 1 cut(s) | 59 |
| Bst6I | CTCTTC | 1 cut(s) | 84 |
| BstC8I | GCNNGC | 3 cut(s) | 61, 123, 182 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 60, 177, 190 |
| BsuRI | GGCC | 1 cut(s) | 125 |
| BtgZI | GCGATG | 1 cut(s) | 78 |
| Cac8I | GCNNGC | 3 cut(s) | 61, 123, 182 |
| Cfr10I | RCCGGY | 1 cut(s) | 59 |
| Cfr13I | GGNCC | 1 cut(s) | 124 |
| CviJI | RGCY | 6 cut(s) | 25, 54, 59, 125, 139, 160 |
| CviKI_1 | RGCY | 6 cut(s) | 25, 54, 59, 125, 139, 160 |
| Eam1104I | CTCTTC | 1 cut(s) | 84 |
| EarI | CTCTTC | 1 cut(s) | 84 |
| Ecl136II | GAGCTC | 1 cut(s) | 139 |
| Eco24I | GRGCYC | 1 cut(s) | 141 |
| Eco53kI | GAGCTC | 1 cut(s) | 139 |
| EcoICRI | GAGCTC | 1 cut(s) | 139 |
| EcoO109I | RGGNCCY | 1 cut(s) | 124 |
| EcoRI | GAATTC | 1 cut(s) | 43 |
| EcoT38I | GRGCYC | 1 cut(s) | 141 |
| FaiI | YATR | 2 cut(s) | 51, 202 |
| FblI | GTMKAC | 1 cut(s) | 151 |
| Fnu4HI | GCNGC | 1 cut(s) | 178 |
| FriOI | GRGCYC | 1 cut(s) | 141 |
| Fsp4HI | GCNGC | 1 cut(s) | 178 |
| GluI | GCNGC | 1 cut(s) | 178 |
| GsuI | CTGGAG | 1 cut(s) | 182 |
| HaeIII | GGCC | 1 cut(s) | 125 |
| HapII | CCGG | 2 cut(s) | 60, 142 |
| HincII | GTYRAC | 1 cut(s) | 152 |
| HindII | GTYRAC | 1 cut(s) | 152 |
| HinfI | GANTC | 1 cut(s) | 28 |
| HpaII | CCGG | 2 cut(s) | 60, 142 |
| Hpy166II | GTNNAC | 1 cut(s) | 152 |
| Hpy8I | GTNNAC | 1 cut(s) | 152 |
| HpyAV | CCTTC | 1 cut(s) | 15 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 60, 177, 190 |
| KroI | GCCGGC | 1 cut(s) | 59 |
| KroNI | GCCGGC | 1 cut(s) | 61 |
| LmnI | GCTCC | 1 cut(s) | 144 |
| LpnPI | CCDG | 5 cut(s) | 29, 73, 107, 146, 155 |
| MbiI | CCGCTC | 1 cut(s) | 177 |
| MboII | GAAGA | 1 cut(s) | 101 |
| MhlI | GDGCHC | 1 cut(s) | 141 |
| MluCI | AATT | 1 cut(s) | 43 |
| MnlI | CCTC | 6 cut(s) | 21, 61, 85, 97, 100, 157 |
| MroNI | GCCGGC | 1 cut(s) | 59 |
| MspI | CCGG | 2 cut(s) | 60, 142 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 60, 177, 190 |
| NaeI | GCCGGC | 1 cut(s) | 61 |
| NgoMIV | GCCGGC | 1 cut(s) | 59 |
| PdiI | GCCGGC | 1 cut(s) | 61 |
| PfeI | GAWTC | 1 cut(s) | 28 |
| PkrI | GCNGC | 1 cut(s) | 179 |
| Psp124BI | GAGCTC | 1 cut(s) | 141 |
| PspPI | GGNCC | 1 cut(s) | 124 |
| SacI | GAGCTC | 1 cut(s) | 141 |
| SalI | GTCGAC | 1 cut(s) | 150 |
| SatI | GCNGC | 1 cut(s) | 178 |
| Sau96I | GGNCC | 1 cut(s) | 124 |
| SduI | GDGCHC | 1 cut(s) | 141 |
| SetI | ASST | 2 cut(s) | 141, 168 |
| Sse9I | AATT | 1 cut(s) | 43 |
| SsiI | CCGC | 2 cut(s) | 145, 177 |
| SstI | GAGCTC | 1 cut(s) | 141 |
| TaqI | TCGA | 1 cut(s) | 151 |
| TasI | AATT | 1 cut(s) | 43 |
| TauI | GCSGC | 1 cut(s) | 180 |
| TfiI | GAWTC | 1 cut(s) | 28 |
| XapI | RAATTY | 1 cut(s) | 43 |
| XmiI | GTMKAC | 1 cut(s) | 151 |