Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0001287

Physical Location & Seq

Genomic Coordinates Reverse (-)

55995401 .. 55998410

Gene Structure 3010 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G028310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1185 bp

ATGCCTATGCATATTGTAATGGATCAAGTGGAGGCACCAATTGTCGATGTCAGCCATGTTGGTGCTCTAGATTTTACTGGCAATGGTGTAGAAGCCGAGTCTTTCAAGCACCGCGTTGATGAAATTTTCGTTCAGGTTGACAAGCTTGAGCAGAGAGTGAATGAGATAGAGCAGTTTTACTCGAGCGCGAGTAAAAAGCAGGCGAATGCAAGTAAGAGTGGCTCAGCTGTGAAGGATAAAGAGAAGCATGTTCTGAGTATGAAGAAGCAGCAGCAAGAGGCTGCATTGAGGGAGGCAGCTGCCGCAAAGAGAATGCAAGAACTCATGCGCCAATTTGGCACCATATTGCGTCAAATTACACAACACAAGTGGGCATGGCCCTTTTTGCAACCTGTAGATGTAGAAGGTCTTGGTTTACATGATTATTATGAGGTCATTGACAAGCCAATGGATTTCAGTACAATTAAAAATCAAATGGAGGCCAAGGATGGTACTGGGTATAAAAACGTAAGGGAGATCTGTGCTGATGTGCGGTTAGTTTTCAAAAATGCGATGCAGTATAATGAGGAGAGAAGTGATGTTCATGTTATGGCCAAAACTTTGATGGCAAAATTTGAGGAAAAGTGGCTGCAGCTTCTGCCTAAGGTTACTGAAGAGGAAAAGAGGTTAGAAGAGGAAGAGGCAGAAGCACAATTAAATATGCAGCTTGCTGAAGAGGCTGCTCATGCTAAAATGGCTAGAGACTTAAGCAACGAGCTTTATGAGGTTGATATGCATTTGGAAGAGCTCCGAGATATGGTTGTTCAAAAGTGCAGAAAAATGTCAACTGAAGAGAAGAGAAAGCTTGGGGTAGCCCTCAGCAGACTGTCCCCAGAGGATCTCAGCACAGCACTAGAGATTGTTGCACAAAGTAATCCAGGTTTTCAAGCTACTGCTGAAGAGGTGGACCTTGATATCGATGCTCAGACTGAATCTACCTTGTGGAGGTTGAAGTTTTTTGTGAAGGACACTTTAGAAGTTCAGGCCAAGAGCTCAGCAAGCATGGGCGCCACCAACAATGACAACACTAACAACCATAACAGCGGTAACAAAAATAACATCAACAACGCTAACAATAAGCGAAAAAGGGAGATTTGTAATGCTATTGCCAAAACCAATAAAAAGAATAAAAAACCAGCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010029 GO:0010030 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:1900140 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

394

Amino Acids

44.83

Weight (kDa)

5.81

Isoelectric Point (pI)

47.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	114 - 199	2.6e-17	Bromodomain
BET	PF17035	273 - 336	1.9e-18	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34900 AT2G34900
fragaria_vesca	FvH4_3g13380 FvH4_3g13380 FvH4_3g13380 FvH4_3g13380 FvH4_3g13380 FvH4_3g13380 FvH4_3g13380 FvH4_7g19980 FvH4_7g19980 FvH4_7g19980 FvH4_7g19980 FvH4_7g19980 FvH4_7g19980
malus_domestica	MD01G1111300.v1.1 MD06G1168600.v1.1 MD08G1151100.v1.1 MD08G1172000.v1.1 MD10G1224000.v1.1 MD12G1128700.v1.1 MD13G1214300.v1.1
prunus_persica	Prupe.2G216800_v2.0.a1 Prupe.2G216800_v2.0.a1 Prupe.2G216800_v2.0.a1 Prupe.4G121200_v2.0.a1 Prupe.4G121200_v2.0.a1 Prupe.4G121200_v2.0.a1 Prupe.4G121200_v2.0.a1 Prupe.4G121200_v2.0.a1 Prupe.4G121200_v2.0.a1 Prupe.4G121200_v2.0.a1
pyrus_communis	pycom01g13870 pycom10g18800
rosa_chinensis	RchiOBHm_Chr1g0363941 RchiOBHm_Chr5g0022091
rosa_laevigata	RLG00000032643
rosa_multiflora	Rmu_co8422649.1_g000001 Rmu_sc0012801.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056840 Rroxscaffold_4G00292820
rosa_rugosa	Rorug01G0311400 Rorug01G0311500 Rorug05G0071200
rosa_samantha	Rh1AG319300 Rh1BG282300 Rh1CG298800 Rh1DG313700 Rh5AG159100 Rh5BG158400 Rh5CG172800 Rh5DG158600
rosa_wichuraiana	Rw1G028300 Rw1G028310 Rw5G014200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	34, 338, 1046
AccII	CGCG	2 cut(s)	114, 188
AciI	CCGC	4 cut(s)	112, 303, 532, 1083
AclWI	GGATC	2 cut(s)	30, 885
AcoI	YGGCCR	1 cut(s)	591
AcsI	RAATTY	2 cut(s)	123, 611
AcuI	CTGAAG	4 cut(s)	672, 732, 849, 957
AcyI	GRCGYC	1 cut(s)	1047
AfaI	GTAC	2 cut(s)	460, 493
AfiI	CCNNNNNNNGG	2 cut(s)	796, 984
AflII	CTTAAG	1 cut(s)	745
AgsI	TTSAA	5 cut(s)	106, 544, 806, 926, 991
AjnI	CCWGG	1 cut(s)	916
Alw21I	GWGCWC	3 cut(s)	67, 789, 1034
Alw26I	GTCTC	1 cut(s)	735
AlwI	GGATC	2 cut(s)	30, 885
AlwNI	CAGNNNCTG	1 cut(s)	637
Ama87I	CYCGRG	1 cut(s)	181
AoxI	GGCC	4 cut(s)	377, 480, 591, 1023
ApeKI	GCWGC	9 cut(s)	268, 271, 281, 296, 299, 628, 631, 703, 719
ApoI	RAATTY	2 cut(s)	123, 611
AspLEI	GCGC	3 cut(s)	188, 330, 1049
AspS9I	GGNCC	2 cut(s)	378, 946
AvaI	CYCGRG	1 cut(s)	181
AvaII	GGWCC	1 cut(s)	946
AxyI	CCTNAGG	1 cut(s)	642
BalI	TGGCCA	1 cut(s)	593
BanI	GGYRCC	3 cut(s)	34, 338, 1046
BanII	GRGCYC	2 cut(s)	789, 1034
Bbv12I	GWGCWC	3 cut(s)	67, 789, 1034
BbvCI	CCTCAGC	1 cut(s)	857
BbvI	GCAGC	9 cut(s)	268, 280, 283, 286, 308, 615, 643, 706, 715
BccI	CCATC	2 cut(s)	482, 598
BciT130I	CCWGG	1 cut(s)	918
BcoDI	GTCTC	1 cut(s)	735
BfaI	CTAG	3 cut(s)	68, 738, 893
BfmI	CTRYAG	2 cut(s)	393, 629
BfoI	RGCGCY	1 cut(s)	1050
BfrI	CTTAAG	1 cut(s)	745
BglI	GCCNNNNNGGC	1 cut(s)	336
BglII	AGATCT	1 cut(s)	516
BlpI	GCTNAGC	2 cut(s)	223, 1033
Bme1390I	CCNGG	1 cut(s)	918
Bme18I	GGWCC	1 cut(s)	946
BmeT110I	CYCGRG	1 cut(s)	181
BmgT120I	GGNCC	2 cut(s)	378, 946
BmiI	GGNNCC	3 cut(s)	36, 340, 1048
BmrFI	CCNGG	1 cut(s)	918
BmrI	ACTGGG	1 cut(s)	504
BmsI	GCATC	2 cut(s)	543, 949
BmuI	ACTGGG	1 cut(s)	504
Bpu10I	CCTNAGC	1 cut(s)	857
Bpu1102I	GCTNAGC	2 cut(s)	223, 1033
BpuEI	CTTGAG	1 cut(s)	167
Bsa29I	ATCGAT	1 cut(s)	957
BsaHI	GRCGYC	1 cut(s)	1047
BsaJI	CCNNGG	1 cut(s)	483
Bsc4I	CCNNNNNNNGG	2 cut(s)	796, 984
Bse1I	ACTGG	2 cut(s)	82, 499
Bse21I	CCTNAGG	1 cut(s)	642
Bse3DI	GCAATG	1 cut(s)	88
BseBI	CCWGG	1 cut(s)	918
BseCI	ATCGAT	1 cut(s)	957
BseDI	CCNNGG	1 cut(s)	483
BseGI	GGATG	1 cut(s)	493
BseLI	CCNNNNNNNGG	2 cut(s)	796, 984
BseMI	GCAATG	1 cut(s)	88
BseMII	CTCAG	6 cut(s)	237, 245, 871, 895, 977, 1047
BseNI	ACTGG	2 cut(s)	82, 499
BseRI	GAGGAG	1 cut(s)	581
BseXI	GCAGC	9 cut(s)	268, 280, 283, 286, 308, 615, 643, 706, 715
BsgI	GTGCAG	1 cut(s)	832
Bsh1236I	CGCG	2 cut(s)	114, 188
BshFI	GGCC	4 cut(s)	379, 482, 593, 1025
BshNI	GGYRCC	3 cut(s)	34, 338, 1046
BshVI	ATCGAT	1 cut(s)	957
BsiHKAI	GWGCWC	3 cut(s)	67, 789, 1034
BsiHKCI	CYCGRG	1 cut(s)	181
BslFI	GGGAC	1 cut(s)	853
BslI	CCNNNNNNNGG	2 cut(s)	796, 984
BsmAI	GTCTC	1 cut(s)	735
BsmFI	GGGAC	1 cut(s)	853
BsmI	GAATGC	2 cut(s)	211, 318
BsnI	GGCC	4 cut(s)	379, 482, 593, 1025
BsoBI	CYCGRG	1 cut(s)	181
Bsp1286I	GDGCHC	3 cut(s)	67, 789, 1034
Bsp143I	GATC	3 cut(s)	22, 516, 877
Bsp1720I	GCTNAGC	2 cut(s)	223, 1033
BspACI	CCGC	4 cut(s)	112, 303, 532, 1083
BspANI	GGCC	4 cut(s)	379, 482, 593, 1025
BspCNI	CTCAG	6 cut(s)	236, 246, 870, 894, 976, 1046
BspDI	ATCGAT	1 cut(s)	957
BspFNI	CGCG	2 cut(s)	114, 188
BspLI	GGNNCC	3 cut(s)	36, 340, 1048
BspMAI	CTGCAG	1 cut(s)	633
BspPI	GGATC	2 cut(s)	30, 885
BspQI	GCTCTTC	1 cut(s)	777
BspT107I	GGYRCC	3 cut(s)	34, 338, 1046
BspTI	CTTAAG	1 cut(s)	745
BsrDI	GCAATG	1 cut(s)	88
BsrI	ACTGG	2 cut(s)	82, 499
BssECI	CCNNGG	1 cut(s)	483
BssMI	GATC	3 cut(s)	22, 516, 877
BssNI	GRCGYC	1 cut(s)	1047
BssT1I	CCWWGG	1 cut(s)	483
Bst2UI	CCWGG	1 cut(s)	918
Bst4CI	ACNGT	1 cut(s)	867
Bst6I	CTCTTC	8 cut(s)	648, 666, 672, 708, 777, 825, 830, 933
BstACI	GRCGYC	1 cut(s)	1047
BstAFI	CTTAAG	1 cut(s)	745
BstAPI	GCANNNNNTGC	1 cut(s)	637
BstC8I	GCNNGC	3 cut(s)	201, 708, 1039
BstDEI	CTNAG	7 cut(s)	223, 254, 642, 857, 881, 963, 1033
BstENI	CCTNNNNNAGG	1 cut(s)	982
BstF5I	GGATG	1 cut(s)	493
BstFNI	CGCG	2 cut(s)	114, 188
BstH2I	RGCGCY	1 cut(s)	1050
BstHHI	GCGC	3 cut(s)	188, 330, 1049
BstKTI	GATC	3 cut(s)	25, 519, 880
BstMAI	GTCTC	1 cut(s)	735
BstMBI	GATC	3 cut(s)	22, 516, 877
BstMWI	GCNNNNNNNGC	8 cut(s)	302, 336, 385, 637, 716, 725, 734, 1038
BstNI	CCWGG	1 cut(s)	918
BstNSI	RCATGY	1 cut(s)	251
BstSCI	CCNGG	1 cut(s)	916
BstSFI	CTRYAG	2 cut(s)	393, 629
BstUI	CGCG	2 cut(s)	114, 188
BstV1I	GCAGC	9 cut(s)	268, 280, 283, 286, 308, 615, 643, 706, 715
BstX2I	RGATCY	2 cut(s)	516, 877
BstYI	RGATCY	2 cut(s)	516, 877
Bsu15I	ATCGAT	1 cut(s)	957
Bsu36I	CCTNAGG	1 cut(s)	642
BsuRI	GGCC	4 cut(s)	379, 482, 593, 1025
BsuTUI	ATCGAT	1 cut(s)	957
BtgZI	GCGATG	1 cut(s)	566
BtsCI	GGATG	1 cut(s)	493
Cac8I	GCNNGC	3 cut(s)	201, 708, 1039
CaiI	CAGNNNCTG	1 cut(s)	637
CfoI	GCGC	3 cut(s)	188, 330, 1049
Cfr13I	GGNCC	2 cut(s)	378, 946
ClaI	ATCGAT	1 cut(s)	957
CseI	GACGC	1 cut(s)	338
Csp6I	GTAC	2 cut(s)	459, 492
CspCI	CAANNNNNGTGG	2 cut(s)	350, 385
CviAII	CATG	8 cut(s)	56, 248, 325, 375, 419, 584, 725, 1042
CviQI	GTAC	2 cut(s)	459, 492
DdeI	CTNAG	7 cut(s)	223, 254, 642, 857, 881, 963, 1033
DinI	GGCGCC	1 cut(s)	1048
DpnI	GATC	3 cut(s)	24, 518, 879
DpnII	GATC	3 cut(s)	22, 516, 877
EaeI	YGGCCR	1 cut(s)	591
Eam1104I	CTCTTC	8 cut(s)	648, 666, 672, 708, 777, 825, 830, 933
EarI	CTCTTC	8 cut(s)	648, 666, 672, 708, 777, 825, 830, 933
Ecl136II	GAGCTC	2 cut(s)	787, 1032
Eco130I	CCWWGG	1 cut(s)	483
Eco24I	GRGCYC	2 cut(s)	789, 1034
Eco32I	GATATC	1 cut(s)	955
Eco47I	GGWCC	1 cut(s)	946
Eco53kI	GAGCTC	2 cut(s)	787, 1032
Eco57I	CTGAAG	4 cut(s)	672, 732, 849, 957
Eco81I	CCTNAGG	1 cut(s)	642
Eco88I	CYCGRG	1 cut(s)	181
EcoICRI	GAGCTC	2 cut(s)	787, 1032
EcoNI	CCTNNNNNAGG	1 cut(s)	982
EcoRII	CCWGG	1 cut(s)	916
EcoRV	GATATC	1 cut(s)	955
EcoT14I	CCWWGG	1 cut(s)	483
EcoT22I	ATGCAT	2 cut(s)	12, 777
EcoT38I	GRGCYC	2 cut(s)	789, 1034
EgeI	GGCGCC	1 cut(s)	1048
EheI	GGCGCC	1 cut(s)	1048
ErhI	CCWWGG	1 cut(s)	483
FaeI	CATG	8 cut(s)	59, 251, 328, 378, 422, 587, 728, 1045
FaqI	GGGAC	1 cut(s)	853
FatI	CATG	8 cut(s)	55, 247, 324, 374, 418, 583, 724, 1041
FokI	GGATG	1 cut(s)	500
FriOI	GRGCYC	2 cut(s)	789, 1034
FspBI	CTAG	3 cut(s)	68, 738, 893
GlaI	GCGC	3 cut(s)	187, 329, 1048
HaeII	RGCGCY	1 cut(s)	1050
HaeIII	GGCC	4 cut(s)	379, 482, 593, 1025
HgaI	GACGC	1 cut(s)	338
HhaI	GCGC	3 cut(s)	188, 330, 1049
Hin1I	GRCGYC	1 cut(s)	1047
Hin1II	CATG	8 cut(s)	59, 251, 328, 378, 422, 587, 728, 1045
Hin6I	GCGC	3 cut(s)	186, 328, 1047
HinP1I	GCGC	3 cut(s)	186, 328, 1047
HincII	GTYRAC	2 cut(s)	139, 825
HindII	GTYRAC	2 cut(s)	139, 825
HindIII	AAGCTT	2 cut(s)	143, 842
HinfI	GANTC	2 cut(s)	98, 971
Hpy166II	GTNNAC	4 cut(s)	139, 416, 825, 946
Hpy188I	TCNGA	3 cut(s)	255, 791, 966
Hpy188III	TCNNGA	2 cut(s)	68, 1182
Hpy8I	GTNNAC	4 cut(s)	139, 416, 825, 946
HpyAV	CCTTC	3 cut(s)	226, 398, 997
HpyCH4III	ACNGT	1 cut(s)	867
HpyCH4IV	ACGT	1 cut(s)	507
HpyF10VI	GCNNNNNNNGC	8 cut(s)	302, 336, 385, 637, 716, 725, 734, 1038
HpyF3I	CTNAG	7 cut(s)	223, 254, 642, 857, 881, 963, 1033
HpySE526I	ACGT	1 cut(s)	507
Hsp92I	GRCGYC	1 cut(s)	1047
Hsp92II	CATG	8 cut(s)	59, 251, 328, 378, 422, 587, 728, 1045
HspAI	GCGC	3 cut(s)	186, 328, 1047
KasI	GGCGCC	1 cut(s)	1046
Kzo9I	GATC	3 cut(s)	22, 516, 877
LguI	GCTCTTC	1 cut(s)	777
LmnI	GCTCC	1 cut(s)	792
LpnPI	CCDG	9 cut(s)	63, 119, 185, 405, 480, 885, 903, 930, 1007
Lsp1109I	GCAGC	9 cut(s)	268, 280, 283, 286, 308, 615, 643, 706, 715
LweI	GCATC	2 cut(s)	543, 949
MaeI	CTAG	3 cut(s)	68, 738, 893
MaeII	ACGT	1 cut(s)	507
MaeIII	GTNAC	2 cut(s)	646, 1085
MalI	GATC	3 cut(s)	24, 518, 879
MboI	GATC	3 cut(s)	22, 516, 877
MboII	GAAGA	9 cut(s)	274, 665, 683, 689, 725, 794, 842, 847, 950
MfeI	CAATTG	1 cut(s)	39
MflI	RGATCY	2 cut(s)	516, 877
MhlI	GDGCHC	3 cut(s)	67, 789, 1034
MlsI	TGGCCA	1 cut(s)	593
MluCI	AATT	7 cut(s)	39, 123, 332, 354, 462, 611, 692
MluNI	TGGCCA	1 cut(s)	593
Mly113I	GGCGCC	1 cut(s)	1047
MlyI	GAGTC	1 cut(s)	107
Mox20I	TGGCCA	1 cut(s)	593
Mph1103I	ATGCAT	2 cut(s)	12, 777
MscI	TGGCCA	1 cut(s)	593
MseI	TTAA	3 cut(s)	465, 695, 746
MslI	CAYNNNNRTG	1 cut(s)	60
Msp20I	TGGCCA	1 cut(s)	593
MspA1I	CMGCKG	3 cut(s)	227, 299, 1083
MspCI	CTTAAG	1 cut(s)	745
MspR9I	CCNGG	1 cut(s)	918
MunI	CAATTG	1 cut(s)	39
Mva1269I	GAATGC	2 cut(s)	211, 318
MvaI	CCWGG	1 cut(s)	918
MvnI	CGCG	2 cut(s)	114, 188
MwoI	GCNNNNNNNGC	8 cut(s)	302, 336, 385, 637, 716, 725, 734, 1038
NarI	GGCGCC	1 cut(s)	1047
NdeII	GATC	3 cut(s)	22, 516, 877
NlaIII	CATG	8 cut(s)	59, 251, 328, 378, 422, 587, 728, 1045
NlaIV	GGNNCC	3 cut(s)	36, 340, 1048
NmeAIII	GCCGAG	1 cut(s)	121
NsiI	ATGCAT	2 cut(s)	12, 777
NspI	RCATGY	1 cut(s)	251
PaeR7I	CTCGAG	1 cut(s)	181
PciSI	GCTCTTC	1 cut(s)	777
PctI	GAATGC	2 cut(s)	211, 318
PfeI	GAWTC	1 cut(s)	971
PleI	GAGTC	1 cut(s)	106
PluTI	GGCGCC	1 cut(s)	1050
PpsI	GAGTC	1 cut(s)	106
Psp124BI	GAGCTC	2 cut(s)	789, 1034
Psp6I	CCWGG	1 cut(s)	916
PspGI	CCWGG	1 cut(s)	916
PspN4I	GGNNCC	3 cut(s)	36, 340, 1048
PspPI	GGNCC	2 cut(s)	378, 946
PspXI	VCTCGAGB	1 cut(s)	181
PstI	CTGCAG	1 cut(s)	633
PstNI	CAGNNNCTG	1 cut(s)	637
PsuI	RGATCY	2 cut(s)	516, 877
PvuII	CAGCTG	2 cut(s)	227, 299
RsaI	GTAC	2 cut(s)	460, 493
RsaNI	GTAC	2 cut(s)	459, 492
RseI	CAYNNNNRTG	1 cut(s)	60
SacI	GAGCTC	2 cut(s)	789, 1034
SapI	GCTCTTC	1 cut(s)	777
SaqAI	TTAA	3 cut(s)	465, 695, 746
Sau3AI	GATC	3 cut(s)	22, 516, 877
Sau96I	GGNCC	2 cut(s)	378, 946
SchI	GAGTC	1 cut(s)	107
ScrFI	CCNGG	1 cut(s)	918
SduI	GDGCHC	3 cut(s)	67, 789, 1034
SfaNI	GCATC	2 cut(s)	543, 949
SfcI	CTRYAG	2 cut(s)	393, 629
SfoI	GGCGCC	1 cut(s)	1048
Sfr274I	CTCGAG	1 cut(s)	181
SinI	GGWCC	1 cut(s)	946
SlaI	CTCGAG	1 cut(s)	181
SmiMI	CAYNNNNRTG	1 cut(s)	60
SmlI	CTYRAG	3 cut(s)	146, 181, 745
SmoI	CTYRAG	3 cut(s)	146, 181, 745
Sse9I	AATT	7 cut(s)	39, 123, 332, 354, 462, 611, 692
SsiI	CCGC	4 cut(s)	112, 303, 532, 1083
SspDI	GGCGCC	1 cut(s)	1046
SspMI	CTAG	3 cut(s)	68, 738, 893
SstI	GAGCTC	2 cut(s)	789, 1034
StyD4I	CCNGG	1 cut(s)	916
StyI	CCWWGG	1 cut(s)	483
TaaI	ACNGT	1 cut(s)	867
TaiI	ACGT	1 cut(s)	510
TaqI	TCGA	3 cut(s)	45, 182, 957
TasI	AATT	7 cut(s)	39, 123, 332, 354, 462, 611, 692
TatI	WGTACW	1 cut(s)	458
TauI	GCSGC	1 cut(s)	305
TfiI	GAWTC	1 cut(s)	971
Tru1I	TTAA	3 cut(s)	465, 695, 746
Tru9I	TTAA	3 cut(s)	465, 695, 746
TseI	GCWGC	9 cut(s)	268, 271, 281, 296, 299, 628, 631, 703, 719
TspDTI	ATGAA	3 cut(s)	135, 275, 572
Vha464I	CTTAAG	1 cut(s)	745
VpaK11BI	GGWCC	1 cut(s)	946
XagI	CCTNNNNNAGG	1 cut(s)	982
XapI	RAATTY	2 cut(s)	123, 611
XbaI	TCTAGA	1 cut(s)	67
XceI	RCATGY	1 cut(s)	251
XcmI	CCANNNNNNNNNTGG	1 cut(s)	601
XhoI	CTCGAG	1 cut(s)	181
XspI	CTAG	3 cut(s)	68, 738, 893
Zsp2I	ATGCAT	2 cut(s)	12, 777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.