Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0001287

Physical Location & Seq

Genomic Coordinates Reverse (-)

57343830 .. 57346629

Gene Structure 2800 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG298800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1167 bp

ATGGATCAAGTGGAGGCACCAATTGTCGATGTCAGCCATGTTGGTGCTCTAGATTTTACTGGCAATGGTGTAGAAGCCGAGTCTTTCAAGCACCGCGTTGATGAAATTTTCGTTCAGGTTGACAAGCTTGAGCAGAGAGTGAATGAGATAGAGCAGTTTTACTCGAGCGCGAGTAAAAAGCAGGCGAATGCAAGTAAGAGTGGCTCAGCTGTGAAGGATAAAGAGAAGCATGTTCTGAGTATGAAGAAGCAGCAGCAAGAGGCTGCATTGAGGGAGGCAGCTGCCGCAAAGAGAATGCAAGAACTCATGCGCCAATTTGGCACCATATTGCGTCAAATTACACAACACAAGTGGGCATGGCCCTTTTTGCAACCTGTAGATGTAGAAGGTCTTGGTTTACATGATTATTATGAGGTCATTGACAAGCCAATGGATTTCAGTACAATTAAAAATCAAATGGAGGCCAAGGATGGTACTGGGTATAAAAACGTAAGGGAGATCTGTGCTGATGTGCGGTTAGTTTTCAAAAATGCGATGCAGTATAATGAGGAGAGAAGTGATGTTCATGTTATGGCCAAAACTTTGATGGCAAAATTTGAGGAAAAGTGGCTGCAGCTTCTGCCTAAGGTTACTGAAGAGGAAAAGAGGCTAGAAGAGGAAGAGGCAGAAGCACAATTAAATATGCAGCTTGCTGAAGAGGCTGCTCATGCTAAAATGGCTAGAGACTTAAGCAACGAGCTTTATGAGGTTGATATGCATTTGGAGGAGCTCCGAGATATGGTTGTTCAAAAGTGCAGAAAAATGTCAACTGAAGAGAAGAGAAAGCTTGGGGTAGCCCTCAGCAGACTGTCCCCAGAGGATCTCAGCACAGCACTAGAGATTGTTGCACAAAGTAATCCAGGTTTTCAAGCTACCGCCGAAGAGGTGGACCTTGATATCGATGCTCAGACTGAATCTACCTTGTGGAGGTTGAAGTTTTTTGTGAAGGACACTTTAGAAGTTCAGGCCAAGAGCTCAGCAAGCACCGGCGCCGCCAACAATGACAACACTAACAACCATAACAGCGGTAACAAAAATAACATCAACAACGCTAACAATAAGCGAAAAAGGGAGATTTGTAATGCTATTGCCAAAACCAATAAAAAGAATAAAAAACCAGCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010029 GO:0010030 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:1900140 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

388

Amino Acids

44.06

Weight (kDa)

5.75

Isoelectric Point (pI)

45.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	108 - 193	2.5e-17	Bromodomain
BET	PF17035	267 - 330	1.9e-18	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34900 AT2G34900
fragaria_vesca	FvH4_3g13380 FvH4_3g13380 FvH4_3g13380 FvH4_3g13380 FvH4_3g13380 FvH4_3g13380 FvH4_3g13380 FvH4_7g19980 FvH4_7g19980 FvH4_7g19980 FvH4_7g19980 FvH4_7g19980 FvH4_7g19980
malus_domestica	MD01G1111300.v1.1 MD06G1168600.v1.1 MD08G1151100.v1.1 MD08G1172000.v1.1 MD10G1224000.v1.1 MD12G1128700.v1.1 MD13G1214300.v1.1
prunus_persica	Prupe.2G216800_v2.0.a1 Prupe.2G216800_v2.0.a1 Prupe.2G216800_v2.0.a1 Prupe.4G121200_v2.0.a1 Prupe.4G121200_v2.0.a1 Prupe.4G121200_v2.0.a1 Prupe.4G121200_v2.0.a1 Prupe.4G121200_v2.0.a1 Prupe.4G121200_v2.0.a1 Prupe.4G121200_v2.0.a1
pyrus_communis	pycom01g13870 pycom10g18800
rosa_chinensis	RchiOBHm_Chr1g0363941 RchiOBHm_Chr5g0022091
rosa_laevigata	RLG00000032643
rosa_multiflora	Rmu_co8422649.1_g000001 Rmu_sc0012801.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056840 Rroxscaffold_4G00292820
rosa_rugosa	Rorug01G0311400 Rorug01G0311500 Rorug05G0071200
rosa_samantha	Rh1AG319300 Rh1BG282300 Rh1CG298800 Rh1DG313700 Rh5AG159100 Rh5BG158400 Rh5CG172800 Rh5DG158600
rosa_wichuraiana	Rw1G028300 Rw1G028310 Rw5G014200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	16, 320, 1028
AccII	CGCG	2 cut(s)	96, 170
AciI	CCGC	6 cut(s)	94, 285, 514, 915, 1032, 1065
AclWI	GGATC	2 cut(s)	12, 867
AcoI	YGGCCR	1 cut(s)	573
AcsI	RAATTY	2 cut(s)	105, 593
AcuI	CTGAAG	3 cut(s)	654, 714, 831
AcyI	GRCGYC	1 cut(s)	1029
AfaI	GTAC	2 cut(s)	442, 475
AfiI	CCNNNNNNNGG	2 cut(s)	778, 966
AflII	CTTAAG	1 cut(s)	727
AgsI	TTSAA	5 cut(s)	88, 526, 788, 908, 973
AjnI	CCWGG	1 cut(s)	898
Alw21I	GWGCWC	3 cut(s)	49, 771, 1016
Alw26I	GTCTC	1 cut(s)	717
AlwI	GGATC	2 cut(s)	12, 867
AlwNI	CAGNNNCTG	1 cut(s)	619
Ama87I	CYCGRG	1 cut(s)	163
AoxI	GGCC	4 cut(s)	359, 462, 573, 1005
ApeKI	GCWGC	9 cut(s)	250, 253, 263, 278, 281, 610, 613, 685, 701
ApoI	RAATTY	2 cut(s)	105, 593
AspLEI	GCGC	3 cut(s)	170, 312, 1031
AspS9I	GGNCC	2 cut(s)	360, 928
AvaI	CYCGRG	1 cut(s)	163
AvaII	GGWCC	1 cut(s)	928
AxyI	CCTNAGG	1 cut(s)	624
BalI	TGGCCA	1 cut(s)	575
BanI	GGYRCC	3 cut(s)	16, 320, 1028
BanII	GRGCYC	2 cut(s)	771, 1016
Bbv12I	GWGCWC	3 cut(s)	49, 771, 1016
BbvCI	CCTCAGC	1 cut(s)	839
BbvI	GCAGC	9 cut(s)	250, 262, 265, 268, 290, 597, 625, 688, 697
BccI	CCATC	2 cut(s)	464, 580
BciT130I	CCWGG	1 cut(s)	900
BcoDI	GTCTC	1 cut(s)	717
BfaI	CTAG	4 cut(s)	50, 650, 720, 875
BfmI	CTRYAG	2 cut(s)	375, 611
BfoI	RGCGCY	1 cut(s)	1032
BfrI	CTTAAG	1 cut(s)	727
BglI	GCCNNNNNGGC	1 cut(s)	318
BglII	AGATCT	1 cut(s)	498
BlpI	GCTNAGC	2 cut(s)	205, 1015
Bme1390I	CCNGG	1 cut(s)	900
Bme18I	GGWCC	1 cut(s)	928
BmeT110I	CYCGRG	1 cut(s)	163
BmgT120I	GGNCC	2 cut(s)	360, 928
BmiI	GGNNCC	3 cut(s)	18, 322, 1030
BmrFI	CCNGG	1 cut(s)	900
BmrI	ACTGGG	1 cut(s)	486
BmsI	GCATC	2 cut(s)	525, 931
BmuI	ACTGGG	1 cut(s)	486
Bpu10I	CCTNAGC	1 cut(s)	839
Bpu1102I	GCTNAGC	2 cut(s)	205, 1015
BpuEI	CTTGAG	1 cut(s)	149
Bsa29I	ATCGAT	1 cut(s)	939
BsaHI	GRCGYC	1 cut(s)	1029
BsaJI	CCNNGG	1 cut(s)	465
Bsc4I	CCNNNNNNNGG	2 cut(s)	778, 966
Bse118I	RCCGGY	1 cut(s)	1025
Bse1I	ACTGG	2 cut(s)	64, 481
Bse21I	CCTNAGG	1 cut(s)	624
Bse3DI	GCAATG	1 cut(s)	70
BseBI	CCWGG	1 cut(s)	900
BseCI	ATCGAT	1 cut(s)	939
BseDI	CCNNGG	1 cut(s)	465
BseGI	GGATG	1 cut(s)	475
BseLI	CCNNNNNNNGG	2 cut(s)	778, 966
BseMI	GCAATG	1 cut(s)	70
BseMII	CTCAG	6 cut(s)	219, 227, 853, 877, 959, 1029
BseNI	ACTGG	2 cut(s)	64, 481
BseRI	GAGGAG	2 cut(s)	563, 779
BseXI	GCAGC	9 cut(s)	250, 262, 265, 268, 290, 597, 625, 688, 697
BsgI	GTGCAG	1 cut(s)	814
Bsh1236I	CGCG	2 cut(s)	96, 170
BshFI	GGCC	4 cut(s)	361, 464, 575, 1007
BshNI	GGYRCC	3 cut(s)	16, 320, 1028
BshVI	ATCGAT	1 cut(s)	939
BsiHKAI	GWGCWC	3 cut(s)	49, 771, 1016
BsiHKCI	CYCGRG	1 cut(s)	163
BsiSI	CCGG	1 cut(s)	1026
BslFI	GGGAC	1 cut(s)	835
BslI	CCNNNNNNNGG	2 cut(s)	778, 966
BsmAI	GTCTC	1 cut(s)	717
BsmFI	GGGAC	1 cut(s)	835
BsmI	GAATGC	2 cut(s)	193, 300
BsnI	GGCC	4 cut(s)	361, 464, 575, 1007
BsoBI	CYCGRG	1 cut(s)	163
Bsp1286I	GDGCHC	3 cut(s)	49, 771, 1016
Bsp143I	GATC	3 cut(s)	4, 498, 859
Bsp1720I	GCTNAGC	2 cut(s)	205, 1015
BspACI	CCGC	6 cut(s)	94, 285, 514, 915, 1032, 1065
BspANI	GGCC	4 cut(s)	361, 464, 575, 1007
BspCNI	CTCAG	6 cut(s)	218, 228, 852, 876, 958, 1028
BspDI	ATCGAT	1 cut(s)	939
BspFNI	CGCG	2 cut(s)	96, 170
BspLI	GGNNCC	3 cut(s)	18, 322, 1030
BspMAI	CTGCAG	1 cut(s)	615
BspPI	GGATC	2 cut(s)	12, 867
BspT107I	GGYRCC	3 cut(s)	16, 320, 1028
BspTI	CTTAAG	1 cut(s)	727
BsrDI	GCAATG	1 cut(s)	70
BsrFI	RCCGGY	1 cut(s)	1025
BsrI	ACTGG	2 cut(s)	64, 481
BssAI	RCCGGY	1 cut(s)	1025
BssECI	CCNNGG	1 cut(s)	465
BssMI	GATC	3 cut(s)	4, 498, 859
BssNI	GRCGYC	1 cut(s)	1029
BssT1I	CCWWGG	1 cut(s)	465
Bst2UI	CCWGG	1 cut(s)	900
Bst4CI	ACNGT	1 cut(s)	849
Bst6I	CTCTTC	7 cut(s)	630, 648, 654, 690, 807, 812, 915
BstACI	GRCGYC	1 cut(s)	1029
BstAFI	CTTAAG	1 cut(s)	727
BstAPI	GCANNNNNTGC	1 cut(s)	619
BstC8I	GCNNGC	3 cut(s)	183, 690, 1021
BstDEI	CTNAG	7 cut(s)	205, 236, 624, 839, 863, 945, 1015
BstENI	CCTNNNNNAGG	1 cut(s)	964
BstF5I	GGATG	1 cut(s)	475
BstFNI	CGCG	2 cut(s)	96, 170
BstH2I	RGCGCY	1 cut(s)	1032
BstHHI	GCGC	3 cut(s)	170, 312, 1031
BstKTI	GATC	3 cut(s)	7, 501, 862
BstMAI	GTCTC	1 cut(s)	717
BstMBI	GATC	3 cut(s)	4, 498, 859
BstMWI	GCNNNNNNNGC	8 cut(s)	284, 318, 367, 619, 698, 707, 716, 1020
BstNI	CCWGG	1 cut(s)	900
BstNSI	RCATGY	1 cut(s)	233
BstSCI	CCNGG	1 cut(s)	898
BstSFI	CTRYAG	2 cut(s)	375, 611
BstUI	CGCG	2 cut(s)	96, 170
BstV1I	GCAGC	9 cut(s)	250, 262, 265, 268, 290, 597, 625, 688, 697
BstX2I	RGATCY	2 cut(s)	498, 859
BstYI	RGATCY	2 cut(s)	498, 859
Bsu15I	ATCGAT	1 cut(s)	939
Bsu36I	CCTNAGG	1 cut(s)	624
BsuRI	GGCC	4 cut(s)	361, 464, 575, 1007
BsuTUI	ATCGAT	1 cut(s)	939
BtgZI	GCGATG	1 cut(s)	548
BtsCI	GGATG	1 cut(s)	475
Cac8I	GCNNGC	3 cut(s)	183, 690, 1021
CaiI	CAGNNNCTG	1 cut(s)	619
CfoI	GCGC	3 cut(s)	170, 312, 1031
Cfr10I	RCCGGY	1 cut(s)	1025
Cfr13I	GGNCC	2 cut(s)	360, 928
ClaI	ATCGAT	1 cut(s)	939
CseI	GACGC	1 cut(s)	320
Csp6I	GTAC	2 cut(s)	441, 474
CspCI	CAANNNNNGTGG	2 cut(s)	332, 367
CviAII	CATG	7 cut(s)	38, 230, 307, 357, 401, 566, 707
CviQI	GTAC	2 cut(s)	441, 474
DdeI	CTNAG	7 cut(s)	205, 236, 624, 839, 863, 945, 1015
DinI	GGCGCC	1 cut(s)	1030
DpnI	GATC	3 cut(s)	6, 500, 861
DpnII	GATC	3 cut(s)	4, 498, 859
EaeI	YGGCCR	1 cut(s)	573
Eam1104I	CTCTTC	7 cut(s)	630, 648, 654, 690, 807, 812, 915
EarI	CTCTTC	7 cut(s)	630, 648, 654, 690, 807, 812, 915
Ecl136II	GAGCTC	2 cut(s)	769, 1014
Eco130I	CCWWGG	1 cut(s)	465
Eco24I	GRGCYC	2 cut(s)	771, 1016
Eco32I	GATATC	1 cut(s)	937
Eco47I	GGWCC	1 cut(s)	928
Eco53kI	GAGCTC	2 cut(s)	769, 1014
Eco57I	CTGAAG	3 cut(s)	654, 714, 831
Eco81I	CCTNAGG	1 cut(s)	624
Eco88I	CYCGRG	1 cut(s)	163
EcoICRI	GAGCTC	2 cut(s)	769, 1014
EcoNI	CCTNNNNNAGG	1 cut(s)	964
EcoRII	CCWGG	1 cut(s)	898
EcoRV	GATATC	1 cut(s)	937
EcoT14I	CCWWGG	1 cut(s)	465
EcoT22I	ATGCAT	1 cut(s)	759
EcoT38I	GRGCYC	2 cut(s)	771, 1016
EgeI	GGCGCC	1 cut(s)	1030
EheI	GGCGCC	1 cut(s)	1030
ErhI	CCWWGG	1 cut(s)	465
FaeI	CATG	7 cut(s)	41, 233, 310, 360, 404, 569, 710
FaqI	GGGAC	1 cut(s)	835
FatI	CATG	7 cut(s)	37, 229, 306, 356, 400, 565, 706
FokI	GGATG	1 cut(s)	482
FriOI	GRGCYC	2 cut(s)	771, 1016
FspBI	CTAG	4 cut(s)	50, 650, 720, 875
GlaI	GCGC	3 cut(s)	169, 311, 1030
HaeII	RGCGCY	1 cut(s)	1032
HaeIII	GGCC	4 cut(s)	361, 464, 575, 1007
HapII	CCGG	1 cut(s)	1026
HgaI	GACGC	1 cut(s)	320
HhaI	GCGC	3 cut(s)	170, 312, 1031
Hin1I	GRCGYC	1 cut(s)	1029
Hin1II	CATG	7 cut(s)	41, 233, 310, 360, 404, 569, 710
Hin6I	GCGC	3 cut(s)	168, 310, 1029
HinP1I	GCGC	3 cut(s)	168, 310, 1029
HincII	GTYRAC	2 cut(s)	121, 807
HindII	GTYRAC	2 cut(s)	121, 807
HindIII	AAGCTT	2 cut(s)	125, 824
HinfI	GANTC	2 cut(s)	80, 953
HpaII	CCGG	1 cut(s)	1026
Hpy166II	GTNNAC	4 cut(s)	121, 398, 807, 928
Hpy188I	TCNGA	3 cut(s)	237, 773, 948
Hpy188III	TCNNGA	2 cut(s)	50, 1164
Hpy8I	GTNNAC	4 cut(s)	121, 398, 807, 928
HpyAV	CCTTC	3 cut(s)	208, 380, 979
HpyCH4III	ACNGT	1 cut(s)	849
HpyCH4IV	ACGT	1 cut(s)	489
HpyF10VI	GCNNNNNNNGC	8 cut(s)	284, 318, 367, 619, 698, 707, 716, 1020
HpyF3I	CTNAG	7 cut(s)	205, 236, 624, 839, 863, 945, 1015
HpySE526I	ACGT	1 cut(s)	489
Hsp92I	GRCGYC	1 cut(s)	1029
Hsp92II	CATG	7 cut(s)	41, 233, 310, 360, 404, 569, 710
HspAI	GCGC	3 cut(s)	168, 310, 1029
KasI	GGCGCC	1 cut(s)	1028
Kzo9I	GATC	3 cut(s)	4, 498, 859
LmnI	GCTCC	2 cut(s)	766, 774
Lsp1109I	GCAGC	9 cut(s)	250, 262, 265, 268, 290, 597, 625, 688, 697
LweI	GCATC	2 cut(s)	525, 931
MaeI	CTAG	4 cut(s)	50, 650, 720, 875
MaeII	ACGT	1 cut(s)	489
MaeIII	GTNAC	2 cut(s)	628, 1067
MalI	GATC	3 cut(s)	6, 500, 861
MboI	GATC	3 cut(s)	4, 498, 859
MboII	GAAGA	8 cut(s)	256, 647, 665, 671, 707, 824, 829, 932
MfeI	CAATTG	1 cut(s)	21
MflI	RGATCY	2 cut(s)	498, 859
MhlI	GDGCHC	3 cut(s)	49, 771, 1016
MlsI	TGGCCA	1 cut(s)	575
MluCI	AATT	7 cut(s)	21, 105, 314, 336, 444, 593, 674
MluNI	TGGCCA	1 cut(s)	575
Mly113I	GGCGCC	1 cut(s)	1029
MlyI	GAGTC	1 cut(s)	89
Mox20I	TGGCCA	1 cut(s)	575
Mph1103I	ATGCAT	1 cut(s)	759
MscI	TGGCCA	1 cut(s)	575
MseI	TTAA	3 cut(s)	447, 677, 728
MslI	CAYNNNNRTG	1 cut(s)	42
Msp20I	TGGCCA	1 cut(s)	575
MspA1I	CMGCKG	3 cut(s)	209, 281, 1065
MspCI	CTTAAG	1 cut(s)	727
MspI	CCGG	1 cut(s)	1026
MspR9I	CCNGG	1 cut(s)	900
MunI	CAATTG	1 cut(s)	21
Mva1269I	GAATGC	2 cut(s)	193, 300
MvaI	CCWGG	1 cut(s)	900
MvnI	CGCG	2 cut(s)	96, 170
MwoI	GCNNNNNNNGC	8 cut(s)	284, 318, 367, 619, 698, 707, 716, 1020
NarI	GGCGCC	1 cut(s)	1029
NdeII	GATC	3 cut(s)	4, 498, 859
NlaIII	CATG	7 cut(s)	41, 233, 310, 360, 404, 569, 710
NlaIV	GGNNCC	3 cut(s)	18, 322, 1030
NmeAIII	GCCGAG	1 cut(s)	103
NsiI	ATGCAT	1 cut(s)	759
NspI	RCATGY	1 cut(s)	233
PaeR7I	CTCGAG	1 cut(s)	163
PctI	GAATGC	2 cut(s)	193, 300
PfeI	GAWTC	1 cut(s)	953
PleI	GAGTC	1 cut(s)	88
PluTI	GGCGCC	1 cut(s)	1032
PpsI	GAGTC	1 cut(s)	88
Psp124BI	GAGCTC	2 cut(s)	771, 1016
Psp6I	CCWGG	1 cut(s)	898
PspGI	CCWGG	1 cut(s)	898
PspN4I	GGNNCC	3 cut(s)	18, 322, 1030
PspPI	GGNCC	2 cut(s)	360, 928
PspXI	VCTCGAGB	1 cut(s)	163
PstI	CTGCAG	1 cut(s)	615
PstNI	CAGNNNCTG	1 cut(s)	619
PsuI	RGATCY	2 cut(s)	498, 859
PvuII	CAGCTG	2 cut(s)	209, 281
RsaI	GTAC	2 cut(s)	442, 475
RsaNI	GTAC	2 cut(s)	441, 474
RseI	CAYNNNNRTG	1 cut(s)	42
SacI	GAGCTC	2 cut(s)	771, 1016
SaqAI	TTAA	3 cut(s)	447, 677, 728
Sau3AI	GATC	3 cut(s)	4, 498, 859
Sau96I	GGNCC	2 cut(s)	360, 928
SchI	GAGTC	1 cut(s)	89
ScrFI	CCNGG	1 cut(s)	900
SduI	GDGCHC	3 cut(s)	49, 771, 1016
SfaNI	GCATC	2 cut(s)	525, 931
SfcI	CTRYAG	2 cut(s)	375, 611
SfoI	GGCGCC	1 cut(s)	1030
Sfr274I	CTCGAG	1 cut(s)	163
SgrAI	CRCCGGYG	1 cut(s)	1025
SinI	GGWCC	1 cut(s)	928
SlaI	CTCGAG	1 cut(s)	163
SmiMI	CAYNNNNRTG	1 cut(s)	42
SmlI	CTYRAG	3 cut(s)	128, 163, 727
SmoI	CTYRAG	3 cut(s)	128, 163, 727
Sse9I	AATT	7 cut(s)	21, 105, 314, 336, 444, 593, 674
SsiI	CCGC	6 cut(s)	94, 285, 514, 915, 1032, 1065
SspDI	GGCGCC	1 cut(s)	1028
SspMI	CTAG	4 cut(s)	50, 650, 720, 875
SstI	GAGCTC	2 cut(s)	771, 1016
StyD4I	CCNGG	1 cut(s)	898
StyI	CCWWGG	1 cut(s)	465
TaaI	ACNGT	1 cut(s)	849
TaiI	ACGT	1 cut(s)	492
TaqI	TCGA	3 cut(s)	27, 164, 939
TasI	AATT	7 cut(s)	21, 105, 314, 336, 444, 593, 674
TatI	WGTACW	1 cut(s)	440
TauI	GCSGC	2 cut(s)	287, 1034
TfiI	GAWTC	1 cut(s)	953
Tru1I	TTAA	3 cut(s)	447, 677, 728
Tru9I	TTAA	3 cut(s)	447, 677, 728
TseI	GCWGC	9 cut(s)	250, 253, 263, 278, 281, 610, 613, 685, 701
TspDTI	ATGAA	3 cut(s)	117, 257, 554
Vha464I	CTTAAG	1 cut(s)	727
VpaK11BI	GGWCC	1 cut(s)	928
XagI	CCTNNNNNAGG	1 cut(s)	964
XapI	RAATTY	2 cut(s)	105, 593
XbaI	TCTAGA	1 cut(s)	49
XceI	RCATGY	1 cut(s)	233
XcmI	CCANNNNNNNNNTGG	1 cut(s)	583
XhoI	CTCGAG	1 cut(s)	163
XspI	CTAG	4 cut(s)	50, 650, 720, 875
Zsp2I	ATGCAT	1 cut(s)	759

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.