Pentatricopeptide repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Cornichon | PF03311 | 115 - 173 | 9.3e-16 | Cornichon protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 509 |
| AbsI | CCTCGAGG | 1 cut(s) | 407 |
| AclI | AACGTT | 1 cut(s) | 191 |
| AfaI | GTAC | 2 cut(s) | 16, 457 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 162 |
| AgsI | TTSAA | 3 cut(s) | 52, 178, 482 |
| AluBI | AGCT | 1 cut(s) | 388 |
| AluI | AGCT | 1 cut(s) | 388 |
| Alw26I | GTCTC | 1 cut(s) | 508 |
| Ama87I | CYCGRG | 1 cut(s) | 407 |
| AoxI | GGCC | 1 cut(s) | 180 |
| AspS9I | GGNCC | 3 cut(s) | 112, 181, 403 |
| AvaI | CYCGRG | 1 cut(s) | 407 |
| AvaII | GGWCC | 2 cut(s) | 112, 403 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 113, 146 |
| BauI | CACGAG | 1 cut(s) | 123 |
| BbsI | GAAGAC | 1 cut(s) | 272 |
| BccI | CCATC | 1 cut(s) | 308 |
| BcoDI | GTCTC | 1 cut(s) | 508 |
| BfmI | CTRYAG | 1 cut(s) | 160 |
| Bme18I | GGWCC | 2 cut(s) | 112, 403 |
| BmeT110I | CYCGRG | 1 cut(s) | 407 |
| BmgT120I | GGNCC | 3 cut(s) | 112, 181, 403 |
| BmiI | GGNNCC | 1 cut(s) | 183 |
| BmrI | ACTGGG | 1 cut(s) | 93 |
| BmsI | GCATC | 1 cut(s) | 310 |
| BmuI | ACTGGG | 1 cut(s) | 93 |
| BpiI | GAAGAC | 1 cut(s) | 272 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 117, 149 |
| BsaJI | CCNNGG | 1 cut(s) | 115 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 162 |
| Bse1I | ACTGG | 1 cut(s) | 99 |
| BseDI | CCNNGG | 1 cut(s) | 115 |
| BseGI | GGATG | 1 cut(s) | 37 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 162 |
| BseMII | CTCAG | 2 cut(s) | 148, 188 |
| BseNI | ACTGG | 1 cut(s) | 99 |
| BshFI | GGCC | 1 cut(s) | 182 |
| BsiHKCI | CYCGRG | 1 cut(s) | 407 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 162 |
| BsmAI | GTCTC | 1 cut(s) | 508 |
| BsnI | GGCC | 1 cut(s) | 182 |
| BsoBI | CYCGRG | 1 cut(s) | 407 |
| Bsp1407I | TGTACA | 1 cut(s) | 14 |
| BspANI | GGCC | 1 cut(s) | 182 |
| BspCNI | CTCAG | 2 cut(s) | 147, 189 |
| BspLI | GGNNCC | 1 cut(s) | 183 |
| BsrGI | TGTACA | 1 cut(s) | 14 |
| BsrI | ACTGG | 1 cut(s) | 99 |
| BssECI | CCNNGG | 1 cut(s) | 115 |
| BssSI | CACGAG | 1 cut(s) | 123 |
| Bst2BI | CACGAG | 1 cut(s) | 123 |
| Bst4CI | ACNGT | 3 cut(s) | 161, 455, 460 |
| BstAUI | TGTACA | 1 cut(s) | 14 |
| BstDEI | CTNAG | 2 cut(s) | 134, 197 |
| BstF5I | GGATG | 1 cut(s) | 37 |
| BstMAI | GTCTC | 1 cut(s) | 508 |
| BstSFI | CTRYAG | 1 cut(s) | 160 |
| BstV2I | GAAGAC | 1 cut(s) | 272 |
| BsuRI | GGCC | 1 cut(s) | 182 |
| BtsCI | GGATG | 1 cut(s) | 37 |
| BtsIMutI | CAGTG | 1 cut(s) | 157 |
| Cfr13I | GGNCC | 3 cut(s) | 112, 181, 403 |
| CpoI | CGGWCCG | 1 cut(s) | 112 |
| CseI | GACGC | 1 cut(s) | 484 |
| Csp6I | GTAC | 2 cut(s) | 15, 456 |
| CspI | CGGWCCG | 1 cut(s) | 112 |
| CviAII | CATG | 2 cut(s) | 42, 331 |
| CviJI | RGCY | 4 cut(s) | 182, 250, 335, 388 |
| CviKI_1 | RGCY | 4 cut(s) | 182, 250, 335, 388 |
| CviQI | GTAC | 2 cut(s) | 15, 456 |
| DdeI | CTNAG | 2 cut(s) | 134, 197 |
| Eco47I | GGWCC | 2 cut(s) | 112, 403 |
| Eco88I | CYCGRG | 1 cut(s) | 407 |
| EcoO109I | RGGNCCY | 1 cut(s) | 181 |
| FaeI | CATG | 2 cut(s) | 45, 334 |
| FaiI | YATR | 9 cut(s) | 43, 56, 58, 326, 332, 370, 430, 432, 509 |
| FatI | CATG | 2 cut(s) | 41, 330 |
| FauNDI | CATATG | 2 cut(s) | 56, 430 |
| FokI | GGATG | 1 cut(s) | 24 |
| HaeIII | GGCC | 1 cut(s) | 182 |
| HgaI | GACGC | 1 cut(s) | 484 |
| Hin1II | CATG | 2 cut(s) | 45, 334 |
| HinfI | GANTC | 2 cut(s) | 107, 434 |
| Hpy166II | GTNNAC | 1 cut(s) | 122 |
| Hpy188I | TCNGA | 4 cut(s) | 112, 146, 226, 447 |
| Hpy188III | TCNNGA | 2 cut(s) | 104, 123 |
| Hpy8I | GTNNAC | 1 cut(s) | 122 |
| HpyAV | CCTTC | 2 cut(s) | 172, 361 |
| HpyCH4III | ACNGT | 3 cut(s) | 161, 455, 460 |
| HpyCH4IV | ACGT | 2 cut(s) | 72, 191 |
| HpyCH4V | TGCA | 2 cut(s) | 63, 231 |
| HpyF3I | CTNAG | 2 cut(s) | 134, 197 |
| HpySE526I | ACGT | 2 cut(s) | 72, 191 |
| Hsp92II | CATG | 2 cut(s) | 45, 334 |
| LpnPI | CCDG | 3 cut(s) | 112, 257, 480 |
| LweI | GCATC | 1 cut(s) | 310 |
| MaeII | ACGT | 2 cut(s) | 72, 191 |
| MaeIII | GTNAC | 1 cut(s) | 68 |
| MboII | GAAGA | 4 cut(s) | 40, 213, 216, 277 |
| MnlI | CCTC | 6 cut(s) | 15, 110, 195, 295, 403, 416 |
| MseI | TTAA | 1 cut(s) | 359 |
| NdeI | CATATG | 2 cut(s) | 56, 430 |
| NlaIII | CATG | 2 cut(s) | 45, 334 |
| NlaIV | GGNNCC | 1 cut(s) | 183 |
| PaeR7I | CTCGAG | 1 cut(s) | 407 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 451 |
| PfeI | GAWTC | 2 cut(s) | 107, 434 |
| PsiI | TTATAA | 1 cut(s) | 509 |
| Psp1406I | AACGTT | 1 cut(s) | 191 |
| PspN4I | GGNNCC | 1 cut(s) | 183 |
| PspPI | GGNCC | 3 cut(s) | 112, 181, 403 |
| PspXI | VCTCGAGB | 1 cut(s) | 407 |
| RsaI | GTAC | 2 cut(s) | 16, 457 |
| RsaNI | GTAC | 2 cut(s) | 15, 456 |
| Rsr2I | CGGWCCG | 1 cut(s) | 112 |
| RsrII | CGGWCCG | 1 cut(s) | 112 |
| SaqAI | TTAA | 1 cut(s) | 359 |
| Sau96I | GGNCC | 3 cut(s) | 112, 181, 403 |
| SetI | ASST | 6 cut(s) | 75, 121, 194, 306, 390, 408 |
| SfaNI | GCATC | 1 cut(s) | 310 |
| SfcI | CTRYAG | 1 cut(s) | 160 |
| Sfr274I | CTCGAG | 1 cut(s) | 407 |
| SinI | GGWCC | 2 cut(s) | 112, 403 |
| SlaI | CTCGAG | 1 cut(s) | 407 |
| SmlI | CTYRAG | 1 cut(s) | 407 |
| SmoI | CTYRAG | 1 cut(s) | 407 |
| TaaI | ACNGT | 3 cut(s) | 161, 455, 460 |
| TaiI | ACGT | 2 cut(s) | 75, 194 |
| TaqI | TCGA | 1 cut(s) | 408 |
| TaqII | GACCGA | 1 cut(s) | 129 |
| TatI | WGTACW | 1 cut(s) | 14 |
| TfiI | GAWTC | 2 cut(s) | 107, 434 |
| Tru1I | TTAA | 1 cut(s) | 359 |
| Tru9I | TTAA | 1 cut(s) | 359 |
| TscAI | CASTG | 1 cut(s) | 164 |
| TspDTI | ATGAA | 3 cut(s) | 26, 343, 426 |
| TspRI | CASTG | 1 cut(s) | 164 |
| VpaK11BI | GGWCC | 2 cut(s) | 112, 403 |
| XhoI | CTCGAG | 1 cut(s) | 407 |