Rorug02G0648100

BONZAI 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0002274
Physical Location & Seq
Reverse (-)
75767442 .. 75770302
2861 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0648100.1

Sequence Viewer

Length: 2028 bp
ATGTCCGAACCACCAAAGAAAGCAACGAGTACTACCACTACTGCTGTGTCTTCCTCCGACATGATGGATCACAGTACTACTAGCTTAACCCCACCGAGCCTCAACTTCCCAGCTCTCAAATTCGAGCTAGAAGGCGACGTCGAAGTTGAATCACCAGACCATTCCATATGGGAGTCGTTGTTTTCCGAACAATTTGATACTGATTTCATGGTGTTGTCCCCGGTGGCAAACACGAACAATAATCTACCCAACTCCCCTCGTACTTTCGGTTACAATGGTCAGGCGATTCAGGGACAGACTAGCTTTTCGGGCTGCTCTCCTCCTCGCTTTGGTTCACCTCCGCTCGGAGCTTTCAGCAGGGACAACAGCAAAGGAAAGGGACTAAGTCCACTCCGGAGGGTTTTCAACTCTCCCGTGAATTACATACAGCAAGAGCCGGAGAACCTGCAGTCGCTACCACCAGCGTCAATCGAAGACTTCTTGGATGACTATCAAAGAGACGGCTTTGTAGCAGCGTATAGTGACCCTAACCTTAACCCAACAACCACATGCACATCAAAGATGTCAGGAGGAGGAAGCAATTTGTCCTCGCAATCTTATCACAACCCAATGGTTTCAATGGATTGCAACATGTCAACAACCATGCAAAACCCTTCCAGGTTTTCGCGATCGGTGAGCGAAACATCGTTAGGTACGGCGTGTAACTCTCAAATGACCCAAGAGTCGAGGGGTGGTGGAGCATATCAGCAGATGGGATCCAACTGTGGTGCACCGTTATCACAGCAGTTGATGCACGAACGCCAGCAAGAGAAGCAACACATGCAGATGCACCCACAAAAGCAACACCACAACAACCACAATTACAATATGATGGCGCCTTCTCTTCCTCCTGTTGCACCTGAGCCGGAACAAGACAGTGGTCTCCAACTGGTTCATCTCCTTCTTGCTTGTGCAGAAGCTGTTGCGAAAGAAGATTACATGTTAGCAAGAAGGTATCTCCACCACCTCAATCAAGTGGTGTCGGCTCTTGGCGACTCCATGCAACGTGTTGCCGCCTGCTTCACAGAAGCCTTAAGCGCACGCCTTGCCGCAACTCTAACCACCAATCCAAGTGCTTTGGCGCCCAAGCCCTTCTCTCCTTTCCCTCCCAACTCCCTAGAAATCCTCAAGATATACCAAATTGTCTACCAAGCCTGCCCCTACGTCAAATTCGCTCACTTCACCGCTAACCAAGCCATTTTCGAGGCTTTTGAGTCCGAAGAACGTGTGCATGTTATTGACCTCGATATTCTTCAAGGTTATCAATGGCCAGCTTTCATGCAAGCCCTAGCAGCCCGATCGGGCGGTGCCCCATTTCTCCGAATAACTGGAGTCGGTCCATGCTTAGAGGCGGTGAAAGAGACGGGCCGGTGTTTGACCGAATTAGCCATCTCTCTTCACGTCCCCTTTGAGTTTCATGCAGTTGGAGAACAACTAGAAGACCTCAAACCACACATGTTCAACCGAAGAATAGGCGAAGCCCTAGCAGTGAACACCGTCAACCGTCTCCACCGCGTTCCGGGGAACTGTCTCGGCAACTTACTAGCCATGATCCGTGACCAAGCACCCAACATTGTGACCCTAGTGGAACAAGAGGCCAGCCACAATGGACCCTACTTTTTGGGCAGGTTCCTCGAAGCCCTACACTATTACTCGGCGATTTTCGACTCGTTGGACGCCACGTTCCCACCGGACTCGGCGCAAAGGGCGAAGGTGGAGCAGTACATATTTGCGCCGGAGATACGGAACATTGTAGCATGTGAAGGAGCCGAGAGGACGGAGAGGCACGAGAGGCTTGAGAAGTGGAGGAAAATAATGGAAGGGAAGGGTTTCAAAAGCGTGCCACTGAGTGCGAACGCGGTGACTCAGTCGAAGATATTGCTGGGTTTGTACTCGTGCGACGGCTATAGAATGACGGAGGACAAAGGTTGCTTGCTGTTGGGGTGGCAAGACCGGTCTATTATGGCGGCGTCTGCATGGAGATGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009987 GO:0010118 GO:0010941 GO:0016020 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060548 GO:0065007 GO:0071944 GO:0090332
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Copine

Protein Analysis

675

Amino Acids

74.62

Weight (kDa)

5.79

Isoelectric Point (pI)

59.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 310 - 674 9.6e-133 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 721
AatII GACGTC 1 cut(s) 141
Acc36I ACCTGC 2 cut(s) 453, 1656
AccB1I GGYRCC 3 cut(s) 874, 1120, 1346
AccBSI CCGCTC 1 cut(s) 343
AccI GTMKAC 1 cut(s) 1185
AccII CGCG 3 cut(s) 667, 1554, 1898
AccIII TCCGGA 1 cut(s) 393
AciI CCGC 9 cut(s) 341, 1053, 1089, 1224, 1344, 1391, 1552, 1898, 2006
AclWI GGATC 4 cut(s) 75, 750, 763, 1585
AcoI YGGCCR 1 cut(s) 1307
AcsI RAATTY 2 cut(s) 119, 1208
AcyI GRCGYC 5 cut(s) 138, 875, 1121, 1716, 2009
AdeI CACNNNGTG 1 cut(s) 1889
AfaI GTAC 6 cut(s) 31, 76, 262, 694, 1763, 1931
AfiI CCNNNNNNNGG 3 cut(s) 329, 344, 1558
AflII CTTAAG 1 cut(s) 1072
AflIII ACRYGT 5 cut(s) 630, 978, 1045, 1264, 1494
AgeI ACCGGT 1 cut(s) 1992
AgsI TTSAA 6 cut(s) 149, 406, 618, 1295, 1501, 1873
AjiI CACGTC 1 cut(s) 1441
AjnI CCWGG 1 cut(s) 656
AloI GAACNNNNNNTCC 2 cut(s) 1706, 1738
AluBI AGCT 7 cut(s) 84, 113, 127, 303, 350, 959, 1313
AluI AGCT 7 cut(s) 84, 113, 127, 303, 350, 959, 1313
Alw21I GWGCWC 1 cut(s) 772
Alw26I GTCTC 5 cut(s) 492, 926, 1394, 1550, 1574
Alw44I GTGCAC 1 cut(s) 768
AlwI GGATC 4 cut(s) 75, 750, 763, 1585
AlwNI CAGNNNCTG 1 cut(s) 959
Aor13HI TCCGGA 1 cut(s) 393
AoxI GGCC 3 cut(s) 1307, 1405, 1635
ApaLI GTGCAC 1 cut(s) 768
ApeKI GCWGC 3 cut(s) 312, 512, 1331
ApoI RAATTY 2 cut(s) 119, 1208
ArsI GACNNNNNNTTYG 2 cut(s) 289, 321
AsiGI ACCGGT 1 cut(s) 1992
Asp700I GAANNNNTTC 1 cut(s) 1868
AspLEI GCGC 5 cut(s) 877, 1079, 1123, 1741, 1774
AspS9I GGNCC 3 cut(s) 1376, 1405, 1649
AsuC2I CCSGG 2 cut(s) 221, 1560
AsuHPI GGTGA 6 cut(s) 144, 327, 685, 1213, 1405, 1912
AvaII GGWCC 2 cut(s) 1376, 1649
BaeGI GKGCMC 2 cut(s) 772, 1351
BalI TGGCCA 1 cut(s) 1309
BamHI GGATCC 1 cut(s) 755
BanI GGYRCC 3 cut(s) 874, 1120, 1346
BauI CACGAG 2 cut(s) 1826, 1933
BbsI GAAGAC 3 cut(s) 42, 480, 1485
Bbv12I GWGCWC 1 cut(s) 772
BbvI GCAGC 3 cut(s) 299, 524, 1343
BccI CCATC 4 cut(s) 58, 745, 865, 1436
BceAI ACGGC 3 cut(s) 517, 711, 1957
BcgI CGANNNNNNTGC 6 cut(s) 1320, 1354, 1654, 1688, 1900, 1934
BciT130I CCWGG 1 cut(s) 658
BcnI CCSGG 2 cut(s) 221, 1560
BcoDI GTCTC 5 cut(s) 492, 926, 1394, 1550, 1574
BfmI CTRYAG 2 cut(s) 446, 1945
BfoI RGCGCY 2 cut(s) 878, 1124
BfrI CTTAAG 1 cut(s) 1072
BfuAI ACCTGC 2 cut(s) 453, 1656
BisI GCNGC 6 cut(s) 313, 513, 1053, 1089, 1332, 2007
BlsI GCNGC 6 cut(s) 314, 514, 1054, 1090, 1333, 2008
BmcAI AGTACT 2 cut(s) 31, 76
Bme1390I CCNGG 3 cut(s) 221, 658, 1560
Bme18I GGWCC 2 cut(s) 1376, 1649
BmgBI CACGTC 1 cut(s) 1441
BmgT120I GGNCC 3 cut(s) 1376, 1405, 1649
BmiI GGNNCC 7 cut(s) 757, 876, 1122, 1348, 1651, 1670, 1807
BmrFI CCNGG 3 cut(s) 221, 658, 1560
BmsI GCATC 3 cut(s) 780, 816, 2012
BoxI GACNNNNGTC 1 cut(s) 918
BpiI GAAGAC 3 cut(s) 42, 480, 1485
BpmI CTGGAG 1 cut(s) 1389
Bpu10I CCTNAGC 1 cut(s) 900
BpuEI CTTGAG 2 cut(s) 1151, 1856
BpuMI CCSGG 2 cut(s) 221, 1560
BsaBI GATNNNNATC 1 cut(s) 489
BsaHI GRCGYC 5 cut(s) 138, 875, 1121, 1716, 2009
BsaI GGTCTC 1 cut(s) 926
BsaJI CCNNGG 2 cut(s) 219, 1559
BsaWI WCCGGW 3 cut(s) 393, 1729, 1992
BsaXI ACNNNNNCTCC 2 cut(s) 164, 194
Bsc4I CCNNNNNNNGG 3 cut(s) 329, 344, 1558
Bse118I RCCGGY 2 cut(s) 1407, 1992
Bse1I ACTGG 2 cut(s) 933, 1372
Bse8I GATNNNNATC 1 cut(s) 489
BseAI TCCGGA 1 cut(s) 393
BseBI CCWGG 1 cut(s) 658
BseDI CCNNGG 2 cut(s) 219, 1559
BseGI GGATG 1 cut(s) 490
BseJI GATNNNNATC 1 cut(s) 489
BseLI CCNNNNNNNGG 3 cut(s) 329, 344, 1558
BseMII CTCAG 3 cut(s) 891, 1877, 1919
BseNI ACTGG 2 cut(s) 933, 1372
BseRI GAGGAG 3 cut(s) 309, 312, 585
BseSI GKGCMC 2 cut(s) 772, 1351
BseXI GCAGC 3 cut(s) 299, 524, 1343
BseYI CCCAGC 2 cut(s) 109, 1921
BsgI GTGCAG 1 cut(s) 972
Bsh1236I CGCG 3 cut(s) 667, 1554, 1898
Bsh1285I CGRYCG 2 cut(s) 671, 1340
BshFI GGCC 3 cut(s) 1309, 1407, 1637
BshNI GGYRCC 3 cut(s) 874, 1120, 1346
BshTI ACCGGT 1 cut(s) 1992
BsiEI CGRYCG 2 cut(s) 671, 1340
BsiHKAI GWGCWC 1 cut(s) 772
BsiSI CCGG 9 cut(s) 221, 394, 437, 905, 1408, 1559, 1730, 1775, 1993
BslFI GGGAC 5 cut(s) 202, 306, 374, 393, 1427
BslI CCNNNNNNNGG 3 cut(s) 329, 344, 1558
BsmAI GTCTC 5 cut(s) 492, 926, 1394, 1550, 1574
BsmBI CGTCTC 3 cut(s) 492, 1394, 1550
BsmFI GGGAC 5 cut(s) 202, 306, 374, 393, 1427
BsnI GGCC 3 cut(s) 1309, 1407, 1637
Bso31I GGTCTC 1 cut(s) 926
Bsp1286I GDGCHC 2 cut(s) 772, 1351
Bsp13I TCCGGA 1 cut(s) 393
Bsp143I GATC 5 cut(s) 67, 668, 755, 1337, 1590
Bsp68I TCGCGA 1 cut(s) 667
BspACI CCGC 9 cut(s) 341, 1053, 1089, 1224, 1344, 1391, 1552, 1898, 2006
BspANI GGCC 3 cut(s) 1309, 1407, 1637
BspCNI CTCAG 3 cut(s) 892, 1878, 1918
BspEI TCCGGA 1 cut(s) 393
BspFNI CGCG 3 cut(s) 667, 1554, 1898
BspLI GGNNCC 7 cut(s) 757, 876, 1122, 1348, 1651, 1670, 1807
BspMAI CTGCAG 1 cut(s) 450
BspMI ACCTGC 2 cut(s) 453, 1656
BspPI GGATC 4 cut(s) 75, 750, 763, 1585
BspT107I GGYRCC 3 cut(s) 874, 1120, 1346
BspTI CTTAAG 1 cut(s) 1072
BspTNI GGTCTC 1 cut(s) 926
BsrBI CCGCTC 1 cut(s) 343
BsrFI RCCGGY 2 cut(s) 1407, 1992
BsrI ACTGG 2 cut(s) 933, 1372
BssAI RCCGGY 2 cut(s) 1407, 1992
BssECI CCNNGG 2 cut(s) 219, 1559
BssMI GATC 5 cut(s) 67, 668, 755, 1337, 1590
BssNI GRCGYC 5 cut(s) 138, 875, 1121, 1716, 2009
BssSI CACGAG 2 cut(s) 1826, 1933
Bst2BI CACGAG 2 cut(s) 1826, 1933
Bst2UI CCWGG 1 cut(s) 658
Bst4CI ACNGT 7 cut(s) 74, 764, 774, 917, 1537, 1544, 1568
Bst6I CTCTTC 2 cut(s) 888, 1440
BstACI GRCGYC 5 cut(s) 138, 875, 1121, 1716, 2009
BstAFI CTTAAG 1 cut(s) 1072
BstAPI GCANNNNNTGC 3 cut(s) 790, 820, 1085
BstC8I GCNNGC 9 cut(s) 803, 1057, 1081, 1195, 1311, 1323, 1639, 1880, 1973
BstDEI CTNAG 5 cut(s) 383, 900, 1384, 1886, 1905
BstF5I GGATG 1 cut(s) 490
BstFNI CGCG 3 cut(s) 667, 1554, 1898
BstH2I RGCGCY 2 cut(s) 878, 1124
BstHHI GCGC 5 cut(s) 877, 1079, 1123, 1741, 1774
BstKTI GATC 5 cut(s) 70, 671, 758, 1340, 1593
BstMAI GTCTC 5 cut(s) 492, 926, 1394, 1550, 1574
BstMBI GATC 5 cut(s) 67, 668, 755, 1337, 1590
BstMCI CGRYCG 2 cut(s) 671, 1340
BstNI CCWGG 1 cut(s) 658
BstNSI RCATGY 7 cut(s) 552, 634, 823, 982, 1274, 1498, 1800
BstPAI GACNNNNGTC 1 cut(s) 918
BstSCI CCNGG 3 cut(s) 219, 656, 1558
BstSFI CTRYAG 2 cut(s) 446, 1945
BstSLI GKGCMC 2 cut(s) 772, 1351
BstUI CGCG 3 cut(s) 667, 1554, 1898
BstV1I GCAGC 3 cut(s) 299, 524, 1343
BstV2I GAAGAC 3 cut(s) 42, 480, 1485
BstX2I RGATCY 1 cut(s) 755
BstYI RGATCY 1 cut(s) 755
BsuRI GGCC 3 cut(s) 1309, 1407, 1637
BtrI CACGTC 1 cut(s) 1441
BtsCI GGATG 1 cut(s) 490
BtsI GCAGTG 1 cut(s) 1533
BtsIMutI CAGTG 3 cut(s) 922, 1533, 1883
BtuMI TCGCGA 1 cut(s) 667
BveI ACCTGC 2 cut(s) 453, 1656
Cac8I GCNNGC 9 cut(s) 803, 1057, 1081, 1195, 1311, 1323, 1639, 1880, 1973
CaiI CAGNNNCTG 1 cut(s) 959
CfoI GCGC 5 cut(s) 877, 1079, 1123, 1741, 1774
Cfr10I RCCGGY 2 cut(s) 1407, 1992
Cfr13I GGNCC 3 cut(s) 1376, 1405, 1649
CseI GACGC 3 cut(s) 453, 1724, 1998
Csp6I GTAC 6 cut(s) 30, 75, 261, 693, 1762, 1930
CspAI ACCGGT 1 cut(s) 1992
CviQI GTAC 6 cut(s) 30, 75, 261, 693, 1762, 1930
DdeI CTNAG 5 cut(s) 383, 900, 1384, 1886, 1905
DinI GGCGCC 2 cut(s) 876, 1122
DpnI GATC 5 cut(s) 69, 670, 757, 1339, 1592
DpnII GATC 5 cut(s) 67, 668, 755, 1337, 1590
DraIII CACNNNGTG 1 cut(s) 1889
DrdI GACNNNNNNGTC 1 cut(s) 721
DseDI GACNNNNNNGTC 1 cut(s) 721
EaeI YGGCCR 1 cut(s) 1307
Eam1104I CTCTTC 2 cut(s) 888, 1440
EarI CTCTTC 2 cut(s) 888, 1440
Eco31I GGTCTC 1 cut(s) 926
Eco47I GGWCC 2 cut(s) 1376, 1649
EcoRII CCWGG 1 cut(s) 656
EgeI GGCGCC 2 cut(s) 876, 1122
EheI GGCGCC 2 cut(s) 876, 1122
Esp3I CGTCTC 3 cut(s) 492, 1394, 1550
FaqI GGGAC 5 cut(s) 202, 306, 374, 393, 1427
FauNDI CATATG 1 cut(s) 167
FblI GTMKAC 1 cut(s) 1185
Fnu4HI GCNGC 6 cut(s) 313, 513, 1053, 1089, 1332, 2007
FokI GGATG 1 cut(s) 497
Fsp4HI GCNGC 6 cut(s) 313, 513, 1053, 1089, 1332, 2007
GlaI GCGC 5 cut(s) 876, 1078, 1122, 1740, 1773
GluI GCNGC 6 cut(s) 313, 513, 1053, 1089, 1332, 2007
GsaI CCCAGC 2 cut(s) 113, 1925
GsuI CTGGAG 1 cut(s) 1389
HaeII RGCGCY 2 cut(s) 878, 1124
HaeIII GGCC 3 cut(s) 1309, 1407, 1637
HapII CCGG 9 cut(s) 221, 394, 437, 905, 1408, 1559, 1730, 1775, 1993
HgaI GACGC 3 cut(s) 453, 1724, 1998
HhaI GCGC 5 cut(s) 877, 1079, 1123, 1741, 1774
Hin1I GRCGYC 5 cut(s) 138, 875, 1121, 1716, 2009
Hin6I GCGC 5 cut(s) 875, 1077, 1121, 1739, 1772
HinP1I GCGC 5 cut(s) 875, 1077, 1121, 1739, 1772
HincII GTYRAC 2 cut(s) 636, 1540
HindII GTYRAC 2 cut(s) 636, 1540
HpaII CCGG 9 cut(s) 221, 394, 437, 905, 1408, 1559, 1730, 1775, 1993
HphI GGTGA 6 cut(s) 144, 327, 685, 1213, 1405, 1912
Hpy166II GTNNAC 7 cut(s) 335, 389, 636, 770, 1186, 1531, 1540
Hpy188I TCNGA 6 cut(s) 7, 58, 187, 347, 1258, 1361
Hpy188III TCNNGA 4 cut(s) 394, 567, 666, 1168
Hpy8I GTNNAC 7 cut(s) 335, 389, 636, 770, 1186, 1531, 1540
Hpy99I CGWCG 3 cut(s) 140, 143, 1943
HpyCH4III ACNGT 7 cut(s) 74, 764, 774, 917, 1537, 1544, 1568
HpyCH4IV ACGT 6 cut(s) 138, 1045, 1203, 1264, 1440, 1721
HpyF3I CTNAG 5 cut(s) 383, 900, 1384, 1886, 1905
HpySE526I ACGT 6 cut(s) 138, 1045, 1203, 1264, 1440, 1721
Hsp92I GRCGYC 5 cut(s) 138, 875, 1121, 1716, 2009
HspAI GCGC 5 cut(s) 875, 1077, 1121, 1739, 1772
KasI GGCGCC 2 cut(s) 874, 1120
Kpn2I TCCGGA 1 cut(s) 393
Kzo9I GATC 5 cut(s) 67, 668, 755, 1337, 1590
LmnI GCTCC 4 cut(s) 347, 737, 1756, 1805
Lsp1109I GCAGC 3 cut(s) 299, 524, 1343
LweI GCATC 3 cut(s) 780, 816, 2012
MaeII ACGT 6 cut(s) 138, 1045, 1203, 1264, 1440, 1721
MaeIII GTNAC 6 cut(s) 269, 521, 701, 1595, 1615, 1900
MalI GATC 5 cut(s) 69, 670, 757, 1339, 1592
MbiI CCGCTC 1 cut(s) 343
MboI GATC 5 cut(s) 67, 668, 755, 1337, 1590
MflI RGATCY 1 cut(s) 755
MhlI GDGCHC 2 cut(s) 772, 1351
MlsI TGGCCA 1 cut(s) 1309
MluCI AATT 8 cut(s) 119, 191, 418, 580, 859, 1179, 1208, 1421
MluNI TGGCCA 1 cut(s) 1309
Mly113I GGCGCC 2 cut(s) 875, 1121
MlyI GAGTC 8 cut(s) 182, 731, 1028, 1262, 1380, 1700, 1727, 1897
MmeI TCCRAC 5 cut(s) 81, 783, 949, 1444, 1692
Mox20I TGGCCA 1 cut(s) 1309
MroI TCCGGA 1 cut(s) 393
MroXI GAANNNNTTC 1 cut(s) 1868
MscI TGGCCA 1 cut(s) 1309
MseI TTAA 3 cut(s) 86, 534, 1073
MslI CAYNNNNRTG 2 cut(s) 824, 2020
Msp20I TGGCCA 1 cut(s) 1309
MspCI CTTAAG 1 cut(s) 1072
MspI CCGG 9 cut(s) 221, 394, 437, 905, 1408, 1559, 1730, 1775, 1993
MspR9I CCNGG 3 cut(s) 221, 658, 1560
MvaI CCWGG 1 cut(s) 658
MvnI CGCG 3 cut(s) 667, 1554, 1898
NarI GGCGCC 2 cut(s) 875, 1121
NciI CCSGG 2 cut(s) 221, 1560
NdeI CATATG 1 cut(s) 167
NdeII GATC 5 cut(s) 67, 668, 755, 1337, 1590
NlaIV GGNNCC 7 cut(s) 757, 876, 1122, 1348, 1651, 1670, 1807
NmeAIII GCCGAG 4 cut(s) 1551, 1673, 1715, 1834
NmuCI GTSAC 4 cut(s) 521, 1595, 1615, 1900
NruI TCGCGA 1 cut(s) 667
NspI RCATGY 7 cut(s) 552, 634, 823, 982, 1274, 1498, 1800
PciI ACATGT 3 cut(s) 630, 978, 1494
PdmI GAANNNNTTC 1 cut(s) 1868
PfeI GAWTC 2 cut(s) 149, 286
PflFI GACNNNGTC 2 cut(s) 384, 1906
PinAI ACCGGT 1 cut(s) 1992
PkrI GCNGC 6 cut(s) 314, 514, 1054, 1090, 1333, 2008
Ple19I CGATCG 2 cut(s) 671, 1340
PleI GAGTC 8 cut(s) 181, 730, 1028, 1261, 1379, 1700, 1727, 1897
PluTI GGCGCC 2 cut(s) 878, 1124
PpsI GAGTC 8 cut(s) 181, 730, 1028, 1261, 1379, 1700, 1727, 1897
PscI ACATGT 3 cut(s) 630, 978, 1494
PshAI GACNNNNGTC 1 cut(s) 918
Psp6I CCWGG 1 cut(s) 656
PspFI CCCAGC 2 cut(s) 109, 1921
PspGI CCWGG 1 cut(s) 656
PspN4I GGNNCC 7 cut(s) 757, 876, 1122, 1348, 1651, 1670, 1807
PspPI GGNCC 3 cut(s) 1376, 1405, 1649
PstI CTGCAG 1 cut(s) 450
PstNI CAGNNNCTG 1 cut(s) 959
PsuI RGATCY 1 cut(s) 755
PsyI GACNNNGTC 2 cut(s) 384, 1906
PvuI CGATCG 2 cut(s) 671, 1340
RruI TCGCGA 1 cut(s) 667
RsaI GTAC 6 cut(s) 31, 76, 262, 694, 1763, 1931
RsaNI GTAC 6 cut(s) 30, 75, 261, 693, 1762, 1930
RseI CAYNNNNRTG 2 cut(s) 824, 2020
SaqAI TTAA 3 cut(s) 86, 534, 1073
SatI GCNGC 6 cut(s) 313, 513, 1053, 1089, 1332, 2007
Sau3AI GATC 5 cut(s) 67, 668, 755, 1337, 1590
Sau96I GGNCC 3 cut(s) 1376, 1405, 1649
ScaI AGTACT 2 cut(s) 31, 76
SchI GAGTC 8 cut(s) 182, 731, 1028, 1262, 1380, 1700, 1727, 1897
ScrFI CCNGG 3 cut(s) 221, 658, 1560
SduI GDGCHC 2 cut(s) 772, 1351
SfaNI GCATC 3 cut(s) 780, 816, 2012
SfcI CTRYAG 2 cut(s) 446, 1945
SfoI GGCGCC 2 cut(s) 876, 1122
SinI GGWCC 2 cut(s) 1376, 1649
SmiMI CAYNNNNRTG 2 cut(s) 824, 2020
SmlI CTYRAG 3 cut(s) 1072, 1166, 1835
SmoI CTYRAG 3 cut(s) 1072, 1166, 1835
Sse9I AATT 8 cut(s) 119, 191, 418, 580, 859, 1179, 1208, 1421
SsiI CCGC 9 cut(s) 341, 1053, 1089, 1224, 1344, 1391, 1552, 1898, 2006
SspDI GGCGCC 2 cut(s) 874, 1120
StyD4I CCNGG 3 cut(s) 219, 656, 1558
TaaI ACNGT 7 cut(s) 74, 764, 774, 917, 1537, 1544, 1568
TaiI ACGT 6 cut(s) 141, 1048, 1206, 1267, 1443, 1724
TaqI TCGA 9 cut(s) 123, 141, 471, 725, 1242, 1284, 1674, 1704, 1910
TaqII GACCGA 2 cut(s) 1364, 1433
TasI AATT 8 cut(s) 119, 191, 418, 580, 859, 1179, 1208, 1421
TatI WGTACW 4 cut(s) 29, 74, 1761, 1929
TauI GCSGC 3 cut(s) 1055, 1091, 2009
TfiI GAWTC 2 cut(s) 149, 286
Tru1I TTAA 3 cut(s) 86, 534, 1073
Tru9I TTAA 3 cut(s) 86, 534, 1073
TscAI CASTG 3 cut(s) 922, 1533, 1890
TseFI GTSAC 4 cut(s) 521, 1595, 1615, 1900
TseI GCWGC 3 cut(s) 312, 512, 1331
Tsp45I GTSAC 4 cut(s) 521, 1595, 1615, 1900
TspDTI ATGAA 4 cut(s) 196, 923, 1306, 1445
TspGWI ACGGA 4 cut(s) 1583, 1798, 1832, 1970
TspRI CASTG 3 cut(s) 922, 1533, 1890
Tth111I GACNNNGTC 2 cut(s) 384, 1906
Vha464I CTTAAG 1 cut(s) 1072
VneI GTGCAC 1 cut(s) 768
VpaK11BI GGWCC 2 cut(s) 1376, 1649
XapI RAATTY 2 cut(s) 119, 1208
XceI RCATGY 7 cut(s) 552, 634, 823, 982, 1274, 1498, 1800
XmiI GTMKAC 1 cut(s) 1185
XmnI GAANNNNTTC 1 cut(s) 1868
ZraI GACGTC 1 cut(s) 139
ZrmI AGTACT 2 cut(s) 31, 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.