Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003266

Physical Location & Seq

Genomic Coordinates Forward (+)

5058619 .. 5063666

Gene Structure 5048 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0057800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGGAAGCTTCCGGTTTCAATGGCGCCTCCAGATTTGACGACGAACAGGGCTTGAGGGTATTGCTCGACGCTTTTGGCCCGGCGTTTTCCCTTGAAGAAATCGCCTCGGCTTATTGCAAGGCCGGGAAGAACGCCGAGGCCGCCGCCGAGACTCTGGCTCTCTCCGCCACCAGCGCCGGCGAAGAATCGTCGGCAGTGGTATCGGATGATGGTGGGATTGGGAAGAAGGACAAAACGACGTCGGATAATGGGAGTGGGAATTCGAGGGGTGCGAAGACGAAGTATCGGTCGGTTTCAGTGGGGAGTGTTTCTGGTGTTATTGGGAAGCATTATGGGAACAAAACGACGTCGTCGGGTGGTAATGGAGGGAAGGCGTTGAGAGTGGACTCAAAGTCCAAGGTGTTGCCGATTCCGGAGAGCTGGGTGGAAAAGGCGGAGTCTTGTTCTTCTTCGGCTGGGGATGATGTGCTTCACCAGGACATGGAGGATTTTCTGTTCAATATGCTTGGAGAGGGGTTCAAGCTCGATAGGGATGTGATTCGAGACGTTCTTGATAGTTGCGGATATGATATGGAAAAGAGCATGGAAAATCTGATCAGTTTGTCAACATCAGCCTCGGATGAAAGAAACGAAGTCATCTCTAACTCCAATGATAAGTCTGCAGGCTCATATCTGAAATTGGAAGAATCTTCTCAGAGAAAGCCCATAAACTCCACTGAAGGTAATGGAGACAGGGCTTCAAATACAAATGAAGTAGAATCTACTGGAAAAGAAAAGAAGAGATTGGATCTACAGAAGGAACTTTTGGCTGCTCTCTTCAATGCTCCTGAGAGACCTGAGGAGCCGGAGCTATCAAAAACAAGAATAGTAAGATCAACGAAGGGATATGCAGACTACGGCCATTTGGTGCTTGAACCTCCAAAAGATTCCTTTTCAGATCACAAGACACCTGTGGTCTATCAACAGCATCATACTGAGGAAGATGCGGATGATGAAGTTAGGTACCAGGTTCTTCGCAAAAGTGTGAAGGAGTATCGGAGTACGATGAAGGAGTATTACCAGGCAGCTGTAGACGCATTTTCTAAGGGAGATCGTATTCGAGCAGACAAACTTATGGAACAGGGACATTTTTTCCAGAAAAAGGCACGCGAAGCAGATGAGGAGTCAAATAAAATGATCCTTAAACCTAGAGATGCTGAGACACAAGGGGATATAGTGCTTGACTTGCATGAAGGTGGTGCCAAGGAGGCAATACGTCTTCTGAAGTGTCATCTCTCTTCATTTTCTGGTATCTCATCAATCAAGCATCTTAAGGTCATTATTGATACAAAGGATAGAGATATCTTGAAAGGATCTCGCAGACGATTAGCAGTTTTGAAGCTTCTGGAGGAAGAATCAATCAAGTGGGTTGAAGGAGACAATGCTGGAACAATACTAATCCAGTTGGAAAGTATTAACCGAAAGAAGTTAACTTTTCTCAAAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006457 GO:0006458 GO:0006996 GO:0007005 GO:0008150 GO:0009507 GO:0009536 GO:0009987 GO:0016043 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044183 GO:0044424 GO:0044444 GO:0044464 GO:0051082 GO:0061077 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

495

Amino Acids

54.43

Weight (kDa)

5.68

Isoelectric Point (pI)

33.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_At5g58720	PF24767	15 - 53	8.6e-06	At5g58720 UBA-like domain
DUF1771	PF08590	335 - 396	7.1e-14	Domain of unknown function (DUF1771)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003266)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g12381
malus_domestica	MD05G1250900.v1.1 MD10G1231500.v1.1
prunus_persica	Prupe.6G183700_v2.0.a1 Prupe.6G184200_v2.0.a1 Prupe.6G184600_v2.0.a1 Prupe.8G064600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0020191 RchiOBHm_Chr5g0020201
rosa_laevigata	RLG00000032508 RLG00000032510 RLG00000032511 RLG00000032585 RLG00000033606
rosa_multiflora	Rmu_sc0002087.1_g000011 Rmu_sc0002087.1_g000012 Rmu_ssc0000244.1_g000031
rosa_roxburghii	Rroxscaffold_1G00057970 Rroxscaffold_1G00058000 Rroxscaffold_1G00058010
rosa_rugosa	Rorug05G0057600 Rorug05G0057700 Rorug05G0057800
rosa_samantha	Rh5AG148000 Rh5AG148100 Rh5BG147600 Rh5BG147700 Rh5BG147800 Rh5CG159000 Rh5CG159100 Rh5CG274700 Rh5DG146800 Rh5DG146900 Rh5DG153600 Rh5DG252100
rosa_wichuraiana	Rw5G013090 Rw5G013100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	242, 350
Acc65I	GGTACC	1 cut(s)	1002
AccB1I	GGYRCC	3 cut(s)	23, 1002, 1238
AccB7I	CCANNNNNTGG	1 cut(s)	481
AccI	GTMKAC	1 cut(s)	1071
AccII	CGCG	1 cut(s)	1149
AccIII	TCCGGA	1 cut(s)	412
AciI	CCGC	6 cut(s)	141, 144, 165, 434, 561, 986
AclWI	GGATC	3 cut(s)	795, 1171, 1360
AcoI	YGGCCR	1 cut(s)	898
AcsI	RAATTY	1 cut(s)	259
AcuI	CTGAAG	2 cut(s)	738, 1283
AcyI	GRCGYC	3 cut(s)	24, 239, 347
AfaI	GTAC	2 cut(s)	1004, 1042
AfiI	CCNNNNNNNGG	2 cut(s)	481, 1141
AflII	CTTAAG	1 cut(s)	1310
AhdI	GACNNNNNGTC	1 cut(s)	391
AjnI	CCWGG	3 cut(s)	474, 1005, 1059
AjuI	GAANNNNNNNTTGG	2 cut(s)	788, 820
AloI	GAACNNNNNNTCC	2 cut(s)	479, 511
AluBI	AGCT	6 cut(s)	8, 420, 523, 850, 1067, 1381
AluI	AGCT	6 cut(s)	8, 420, 523, 850, 1067, 1381
Alw26I	GTCTC	6 cut(s)	143, 537, 723, 826, 1193, 1410
AlwI	GGATC	3 cut(s)	795, 1171, 1360
Aor13HI	TCCGGA	1 cut(s)	412
AoxI	GGCC	4 cut(s)	76, 120, 138, 898
ApeKI	GCWGC	2 cut(s)	809, 1064
ApoI	RAATTY	1 cut(s)	259
ArsI	GACNNNNNNTTYG	2 cut(s)	272, 304
Asp718I	GGTACC	1 cut(s)	1002
AspLEI	GCGC	2 cut(s)	26, 176
AspS9I	GGNCC	1 cut(s)	77
AsuC2I	CCSGG	2 cut(s)	80, 124
AsuHPI	GGTGA	1 cut(s)	464
AxyI	CCTNAGG	1 cut(s)	837
BanI	GGYRCC	3 cut(s)	23, 1002, 1238
BarI	GAAGNNNNNNTAC	2 cut(s)	1040, 1072
BbsI	GAAGAC	2 cut(s)	281, 1250
BbvI	GCAGC	2 cut(s)	796, 1076
BccI	CCATC	1 cut(s)	203
BceAI	ACGGC	1 cut(s)	913
BcgI	CGANNNNNNTGC	2 cut(s)	183, 217
BciT130I	CCWGG	3 cut(s)	476, 1007, 1061
BclI	TGATCA	1 cut(s)	594
BcnI	CCSGG	2 cut(s)	80, 124
BcoDI	GTCTC	6 cut(s)	143, 537, 723, 826, 1193, 1410
BfaI	CTAG	1 cut(s)	1188
BfmI	CTRYAG	3 cut(s)	660, 791, 1068
BfoI	RGCGCY	2 cut(s)	27, 177
BfrI	CTTAAG	1 cut(s)	1310
BglI	GCCNNNNNGGC	1 cut(s)	1247
BisI	GCNGC	4 cut(s)	141, 144, 810, 1065
BlsI	GCNGC	4 cut(s)	142, 145, 811, 1066
Bme1390I	CCNGG	5 cut(s)	80, 124, 476, 1007, 1061
BmeRI	GACNNNNNGTC	1 cut(s)	391
BmgT120I	GGNCC	1 cut(s)	77
BmiI	GGNNCC	4 cut(s)	25, 843, 1004, 1240
BmrFI	CCNGG	5 cut(s)	80, 124, 476, 1007, 1061
BmsI	GCATC	4 cut(s)	973, 976, 1183, 1315
BpiI	GAAGAC	2 cut(s)	281, 1250
BpmI	CTGGAG	2 cut(s)	13, 1406
BpuEI	CTTGAG	1 cut(s)	73
BpuMI	CCSGG	2 cut(s)	80, 124
BsaHI	GRCGYC	3 cut(s)	24, 239, 347
BsaI	GGTCTC	1 cut(s)	826
BsaJI	CCNNGG	5 cut(s)	105, 135, 396, 615, 1242
BsaWI	WCCGGW	2 cut(s)	11, 412
Bsc4I	CCNNNNNNNGG	2 cut(s)	481, 1141
Bse118I	RCCGGY	1 cut(s)	176
Bse1I	ACTGG	2 cut(s)	769, 1441
Bse21I	CCTNAGG	1 cut(s)	837
BseAI	TCCGGA	1 cut(s)	412
BseBI	CCWGG	3 cut(s)	476, 1007, 1061
BseDI	CCNNGG	5 cut(s)	105, 135, 396, 615, 1242
BseGI	GGATG	5 cut(s)	211, 466, 538, 625, 994
BseLI	CCNNNNNNNGG	2 cut(s)	481, 1141
BseMII	CTCAG	5 cut(s)	707, 819, 828, 966, 1188
BseNI	ACTGG	2 cut(s)	769, 1441
BseRI	GAGGAG	2 cut(s)	854, 1175
BseXI	GCAGC	2 cut(s)	796, 1076
BseYI	CCCAGC	2 cut(s)	420, 455
Bsh1236I	CGCG	1 cut(s)	1149
Bsh1285I	CGRYCG	1 cut(s)	290
BshFI	GGCC	4 cut(s)	78, 122, 140, 900
BshNI	GGYRCC	3 cut(s)	23, 1002, 1238
BsiEI	CGRYCG	1 cut(s)	290
BsiSI	CCGG	6 cut(s)	12, 80, 123, 177, 413, 845
BslFI	GGGAC	1 cut(s)	1137
BslI	CCNNNNNNNGG	2 cut(s)	481, 1141
BsmAI	GTCTC	6 cut(s)	143, 537, 723, 826, 1193, 1410
BsmBI	CGTCTC	1 cut(s)	537
BsmFI	GGGAC	1 cut(s)	1137
BsnI	GGCC	4 cut(s)	78, 122, 140, 900
Bso31I	GGTCTC	1 cut(s)	826
Bsp13I	TCCGGA	1 cut(s)	412
Bsp143I	GATC	7 cut(s)	594, 787, 872, 937, 1090, 1176, 1352
BspACI	CCGC	6 cut(s)	141, 144, 165, 434, 561, 986
BspANI	GGCC	4 cut(s)	78, 122, 140, 900
BspCNI	CTCAG	5 cut(s)	706, 820, 829, 967, 1189
BspEI	TCCGGA	1 cut(s)	412
BspFNI	CGCG	1 cut(s)	1149
BspLI	GGNNCC	4 cut(s)	25, 843, 1004, 1240
BspMAI	CTGCAG	1 cut(s)	664
BspPI	GGATC	3 cut(s)	795, 1171, 1360
BspT107I	GGYRCC	3 cut(s)	23, 1002, 1238
BspTI	CTTAAG	1 cut(s)	1310
BspTNI	GGTCTC	1 cut(s)	826
BsrFI	RCCGGY	1 cut(s)	176
BsrI	ACTGG	2 cut(s)	769, 1441
BssAI	RCCGGY	1 cut(s)	176
BssECI	CCNNGG	5 cut(s)	105, 135, 396, 615, 1242
BssMI	GATC	7 cut(s)	594, 787, 872, 937, 1090, 1176, 1352
BssNI	GRCGYC	3 cut(s)	24, 239, 347
BssT1I	CCWWGG	2 cut(s)	396, 1242
Bst2UI	CCWGG	3 cut(s)	476, 1007, 1061
Bst6I	CTCTTC	3 cut(s)	773, 821, 1282
BstACI	GRCGYC	3 cut(s)	24, 239, 347
BstAFI	CTTAAG	1 cut(s)	1310
BstC8I	GCNNGC	3 cut(s)	178, 664, 1147
BstDEI	CTNAG	6 cut(s)	693, 828, 837, 975, 1083, 1197
BstF5I	GGATG	5 cut(s)	211, 466, 538, 625, 994
BstFNI	CGCG	1 cut(s)	1149
BstH2I	RGCGCY	2 cut(s)	27, 177
BstHHI	GCGC	2 cut(s)	26, 176
BstKTI	GATC	7 cut(s)	597, 790, 875, 940, 1093, 1179, 1355
BstMAI	GTCTC	6 cut(s)	143, 537, 723, 826, 1193, 1410
BstMBI	GATC	7 cut(s)	594, 787, 872, 937, 1090, 1176, 1352
BstMCI	CGRYCG	1 cut(s)	290
BstMWI	GCNNNNNNNGC	7 cut(s)	140, 164, 173, 1073, 1151, 1225, 1247
BstNI	CCWGG	3 cut(s)	476, 1007, 1061
BstSCI	CCNGG	5 cut(s)	78, 122, 474, 1005, 1059
BstSFI	CTRYAG	3 cut(s)	660, 791, 1068
BstUI	CGCG	1 cut(s)	1149
BstV1I	GCAGC	2 cut(s)	796, 1076
BstV2I	GAAGAC	2 cut(s)	281, 1250
BstX2I	RGATCY	2 cut(s)	787, 1352
BstYI	RGATCY	2 cut(s)	787, 1352
Bsu36I	CCTNAGG	1 cut(s)	837
BsuRI	GGCC	4 cut(s)	78, 122, 140, 900
BtsCI	GGATG	5 cut(s)	211, 466, 538, 625, 994
BtsI	GCAGTG	1 cut(s)	201
BtsIMutI	CAGTG	3 cut(s)	201, 303, 714
Cac8I	GCNNGC	3 cut(s)	178, 664, 1147
CfoI	GCGC	2 cut(s)	26, 176
Cfr10I	RCCGGY	1 cut(s)	176
Cfr13I	GGNCC	1 cut(s)	77
CseI	GACGC	2 cut(s)	77, 1082
CsiI	ACCWGGT	1 cut(s)	1005
Csp6I	GTAC	2 cut(s)	1003, 1041
CviAII	CATG	3 cut(s)	481, 583, 1229
CviQI	GTAC	2 cut(s)	1003, 1041
DdeI	CTNAG	6 cut(s)	693, 828, 837, 975, 1083, 1197
DinI	GGCGCC	1 cut(s)	25
DpnI	GATC	7 cut(s)	596, 789, 874, 939, 1092, 1178, 1354
DpnII	GATC	7 cut(s)	594, 787, 872, 937, 1090, 1176, 1352
DriI	GACNNNNNGTC	1 cut(s)	391
EaeI	YGGCCR	1 cut(s)	898
Eam1104I	CTCTTC	3 cut(s)	773, 821, 1282
Eam1105I	GACNNNNNGTC	1 cut(s)	391
EarI	CTCTTC	3 cut(s)	773, 821, 1282
EciI	GGCGGA	2 cut(s)	154, 449
Eco130I	CCWWGG	2 cut(s)	396, 1242
Eco31I	GGTCTC	1 cut(s)	826
Eco32I	GATATC	1 cut(s)	1342
Eco57I	CTGAAG	2 cut(s)	738, 1283
Eco81I	CCTNAGG	1 cut(s)	837
EcoRI	GAATTC	1 cut(s)	259
EcoRII	CCWGG	3 cut(s)	474, 1005, 1059
EcoRV	GATATC	1 cut(s)	1342
EcoT14I	CCWWGG	2 cut(s)	396, 1242
EgeI	GGCGCC	1 cut(s)	25
EheI	GGCGCC	1 cut(s)	25
ErhI	CCWWGG	2 cut(s)	396, 1242
Esp3I	CGTCTC	1 cut(s)	537
FaeI	CATG	3 cut(s)	484, 586, 1232
FaqI	GGGAC	1 cut(s)	1137
FatI	CATG	3 cut(s)	480, 582, 1228
FbaI	TGATCA	1 cut(s)	594
FblI	GTMKAC	1 cut(s)	1071
Fnu4HI	GCNGC	4 cut(s)	141, 144, 810, 1065
FokI	GGATG	5 cut(s)	218, 473, 545, 632, 1001
Fsp4HI	GCNGC	4 cut(s)	141, 144, 810, 1065
FspBI	CTAG	1 cut(s)	1188
GlaI	GCGC	2 cut(s)	25, 175
GluI	GCNGC	4 cut(s)	141, 144, 810, 1065
GsaI	CCCAGC	2 cut(s)	424, 459
GsuI	CTGGAG	2 cut(s)	13, 1406
HaeII	RGCGCY	2 cut(s)	27, 177
HaeIII	GGCC	4 cut(s)	78, 122, 140, 900
HapII	CCGG	6 cut(s)	12, 80, 123, 177, 413, 845
HgaI	GACGC	2 cut(s)	77, 1082
HhaI	GCGC	2 cut(s)	26, 176
Hin1I	GRCGYC	3 cut(s)	24, 239, 347
Hin1II	CATG	3 cut(s)	484, 586, 1232
Hin6I	GCGC	2 cut(s)	24, 174
HinP1I	GCGC	2 cut(s)	24, 174
HincII	GTYRAC	2 cut(s)	606, 1470
HindII	GTYRAC	2 cut(s)	606, 1470
HindIII	AAGCTT	2 cut(s)	6, 1379
HpaI	GTTAAC	1 cut(s)	1470
HpaII	CCGG	6 cut(s)	12, 80, 123, 177, 413, 845
HphI	GGTGA	1 cut(s)	464
Hpy166II	GTNNAC	4 cut(s)	385, 606, 1072, 1470
Hpy188I	TCNGA	9 cut(s)	205, 244, 594, 619, 675, 696, 937, 1038, 1263
Hpy188III	TCNNGA	8 cut(s)	30, 413, 542, 551, 827, 1135, 1345, 1385
Hpy8I	GTNNAC	4 cut(s)	385, 606, 1072, 1470
Hpy99I	CGWCG	8 cut(s)	44, 71, 193, 241, 244, 349, 352, 355
HpyAV	CCTTC	9 cut(s)	220, 364, 713, 790, 874, 1021, 1042, 1226, 1406
HpyCH4IV	ACGT	4 cut(s)	239, 347, 546, 1255
HpyCH4V	TGCA	4 cut(s)	117, 662, 890, 1228
HpyF10VI	GCNNNNNNNGC	7 cut(s)	140, 164, 173, 1073, 1151, 1225, 1247
HpyF3I	CTNAG	6 cut(s)	693, 828, 837, 975, 1083, 1197
HpySE526I	ACGT	4 cut(s)	239, 347, 546, 1255
Hsp92I	GRCGYC	3 cut(s)	24, 239, 347
Hsp92II	CATG	3 cut(s)	484, 586, 1232
HspAI	GCGC	2 cut(s)	24, 174
KasI	GGCGCC	1 cut(s)	23
Kpn2I	TCCGGA	1 cut(s)	412
KpnI	GGTACC	1 cut(s)	1006
KroI	GCCGGC	1 cut(s)	176
KroNI	GCCGGC	1 cut(s)	178
Ksp22I	TGATCA	1 cut(s)	594
KspAI	GTTAAC	1 cut(s)	1470
Kzo9I	GATC	7 cut(s)	594, 787, 872, 937, 1090, 1176, 1352
LmnI	GCTCC	3 cut(s)	829, 841, 847
Lsp1109I	GCAGC	2 cut(s)	796, 1076
LweI	GCATC	4 cut(s)	973, 976, 1183, 1315
MabI	ACCWGGT	1 cut(s)	1005
MaeI	CTAG	1 cut(s)	1188
MaeII	ACGT	4 cut(s)	239, 347, 546, 1255
MalI	GATC	7 cut(s)	596, 789, 874, 939, 1092, 1178, 1354
MboI	GATC	7 cut(s)	594, 787, 872, 937, 1090, 1176, 1352
MflI	RGATCY	2 cut(s)	787, 1352
MluCI	AATT	2 cut(s)	259, 677
Mly113I	GGCGCC	1 cut(s)	24
MlyI	GAGTC	4 cut(s)	145, 380, 446, 1172
MmeI	TCCRAC	2 cut(s)	222, 1425
MreI	CGCCGGCG	1 cut(s)	176
MroI	TCCGGA	1 cut(s)	412
MroNI	GCCGGC	1 cut(s)	176
MseI	TTAA	4 cut(s)	1182, 1311, 1455, 1469
MslI	CAYNNNNRTG	1 cut(s)	1233
MspA1I	CMGCKG	1 cut(s)	1067
MspCI	CTTAAG	1 cut(s)	1310
MspI	CCGG	6 cut(s)	12, 80, 123, 177, 413, 845
MspR9I	CCNGG	5 cut(s)	80, 124, 476, 1007, 1061
MvaI	CCWGG	3 cut(s)	476, 1007, 1061
MvnI	CGCG	1 cut(s)	1149
MwoI	GCNNNNNNNGC	7 cut(s)	140, 164, 173, 1073, 1151, 1225, 1247
NaeI	GCCGGC	1 cut(s)	178
NarI	GGCGCC	1 cut(s)	24
NciI	CCSGG	2 cut(s)	80, 124
NdeII	GATC	7 cut(s)	594, 787, 872, 937, 1090, 1176, 1352
NgoMIV	GCCGGC	1 cut(s)	176
NlaIII	CATG	3 cut(s)	484, 586, 1232
NlaIV	GGNNCC	4 cut(s)	25, 843, 1004, 1240
NmeAIII	GCCGAG	3 cut(s)	86, 160, 172
PcsI	WCGNNNNNNNCGW	1 cut(s)	269
PdiI	GCCGGC	1 cut(s)	178
PfeI	GAWTC	7 cut(s)	185, 409, 538, 686, 758, 926, 1394
PflFI	GACNNNGTC	1 cut(s)	349
PflMI	CCANNNNNTGG	1 cut(s)	481
PkrI	GCNGC	4 cut(s)	142, 145, 811, 1066
PleI	GAGTC	4 cut(s)	145, 380, 445, 1171
PluTI	GGCGCC	1 cut(s)	27
PpsI	GAGTC	4 cut(s)	145, 380, 445, 1171
Psp6I	CCWGG	3 cut(s)	474, 1005, 1059
PspFI	CCCAGC	2 cut(s)	420, 455
PspGI	CCWGG	3 cut(s)	474, 1005, 1059
PspN4I	GGNNCC	4 cut(s)	25, 843, 1004, 1240
PspPI	GGNCC	1 cut(s)	77
PstI	CTGCAG	1 cut(s)	664
PsuI	RGATCY	2 cut(s)	787, 1352
PsyI	GACNNNGTC	1 cut(s)	349
PvuII	CAGCTG	1 cut(s)	1067
RsaI	GTAC	2 cut(s)	1004, 1042
RsaNI	GTAC	2 cut(s)	1003, 1041
RseI	CAYNNNNRTG	1 cut(s)	1233
SaqAI	TTAA	4 cut(s)	1182, 1311, 1455, 1469
SatI	GCNGC	4 cut(s)	141, 144, 810, 1065
Sau3AI	GATC	7 cut(s)	594, 787, 872, 937, 1090, 1176, 1352
Sau96I	GGNCC	1 cut(s)	77
SchI	GAGTC	4 cut(s)	145, 380, 446, 1172
ScrFI	CCNGG	5 cut(s)	80, 124, 476, 1007, 1061
SexAI	ACCWGGT	1 cut(s)	1005
SfaNI	GCATC	4 cut(s)	973, 976, 1183, 1315
SfcI	CTRYAG	3 cut(s)	660, 791, 1068
SfoI	GGCGCC	1 cut(s)	25
SgrAI	CRCCGGYG	1 cut(s)	176
SmiMI	CAYNNNNRTG	1 cut(s)	1233
SmlI	CTYRAG	2 cut(s)	52, 1310
SmoI	CTYRAG	2 cut(s)	52, 1310
Sse9I	AATT	2 cut(s)	259, 677
SsiI	CCGC	6 cut(s)	141, 144, 165, 434, 561, 986
SspDI	GGCGCC	1 cut(s)	23
SspMI	CTAG	1 cut(s)	1188
StyD4I	CCNGG	5 cut(s)	78, 122, 474, 1005, 1059
StyI	CCWWGG	2 cut(s)	396, 1242
TaiI	ACGT	4 cut(s)	242, 350, 549, 1258
TaqI	TCGA	5 cut(s)	66, 263, 525, 541, 1099
TaqII	GACCGA	1 cut(s)	276
TasI	AATT	2 cut(s)	259, 677
TauI	GCSGC	2 cut(s)	143, 146
TfiI	GAWTC	7 cut(s)	185, 409, 538, 686, 758, 926, 1394
Tru1I	TTAA	4 cut(s)	1182, 1311, 1455, 1469
Tru9I	TTAA	4 cut(s)	1182, 1311, 1455, 1469
TscAI	CASTG	3 cut(s)	201, 303, 721
TseI	GCWGC	2 cut(s)	809, 1064
TspDTI	ATGAA	6 cut(s)	636, 765, 1008, 1061, 1245, 1269
TspRI	CASTG	3 cut(s)	201, 303, 721
Tth111I	GACNNNGTC	1 cut(s)	349
Van91I	CCANNNNNTGG	1 cut(s)	481
Vha464I	CTTAAG	1 cut(s)	1310
XapI	RAATTY	1 cut(s)	259
XmiI	GTMKAC	1 cut(s)	1071
XspI	CTAG	1 cut(s)	1188
ZraI	GACGTC	2 cut(s)	240, 348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.