Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002305

Physical Location & Seq

Genomic Coordinates Forward (+)

58229894 .. 58233182

Gene Structure 3289 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0453600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGTCTTCACCGCCGTGGTCTCTGCCTTCGGCTGCCGTTCCTGTCACCACACCACCACCACTTCCACCGTCACAGCCACCGGCATTGCCGCCACTATCGCCACAGTCACCACCTTTTGTATCCCCGCTATTTCCACCTACTAGTCTTCCTGCCCTGCCTCCTGTACACAACTCTATCCCTCCTGTTTCCTCACCATTGCCATCTGTGGTCCAACCTCCACCCCCACCAGTCACCTCTCCACCACCGCCGTCTGTCACTTCTCCTCCTCCACCTTCACTAACCTTTCCGCCACCGACTCCATTGCCATCAAGACCTTCTCCACCTCCACCTCCACAGCCTACATTATCACCACCACCATTACCAACACCAAAAACACCATATCTTTCTCCTCCAACCAAACCACTAACTTCTCCGCCGCTGCCACCACCCTCAACAACTCCAACCAACGACTCTCCACCACCTACATTGTCAACTCCCCTACCTCCGGTGACCACCACTACTCCTCCACCTCCTTTAGCCACTCCAAGCAACAGCGCTCCACCACCTGATTTAGCAACTCTGCTTCCACCAGTGGCCACCAGTCCTAAACCACCACCCACTTTGGCCAGAACTCTGCCACCTTCGCCTAGTAATGCTGTAACACCTTTGCCTGGTAATGCTGTAACACCTTTGCCTACAACAACATTGACACCACCTCCATTGATCCATTCACCATCACCGTCCTTATTGCCGGCCACCTTGCAAGTTCAGAAGCCACAGCCAAAAGCAGCAGCAGGCCTCGTAGCTGGATGTGTCATTGTTGGAGTTGTTGTAGTTTTCCTCCTCCTCGGAATTGTACTTATTTGCTACAAGCGTAGGAGTAGAAAGAACAACGCTATTCCGGAAGATTACTATAAACCACCCTCCTTGGGACCAAAAGATGGCTGCTATGATGCTGTTCAGCCCCATCACAATGTTCCTCAACCTGGCGTCCATGTTATCAGGGTGCTGTCCAGCACATCAACATCTCCAATGCGCCGTGCCGCTGGCTCTGAGGTTTTATATGCACATCAACCTCAATGGCTTGGTTTTCCCATGGATATCTCAAATGGAACATTCACCTATGATCAATTGTTGGTAGCAACAAATGGGTTTTCAGAGGCCAACCTTCTTGGACAAGGCGGTTTTGGGTATGTCCACAAGGGAGTACTTCCAGGTGGGAAGGAAGTTGCAGTGAAGCAGTTAAAGACAGGAAGCCGGCAAGGGGAGCGAGAGTTTCATGCTGAGGTTGACATCATTAGCCTGGTGCATCACAAGCATCTAGTTTCATTGGTAGGGCACTGTATCAAGGGGGCTGAGAGGTTGCTTGTATATGAGTTTGTTCCAAATAACACCTTAGAATTCCACTTACATGGATTAGGACAGACTGTTTTGGAGTGGGAAATAAGATTGAAAATAGCTACTGGCTCTGCAAAAGGGCTAGCATATCTCCATGAAGATTGCAATCCAAAAATCATTCATCGTGATATCAAGGCATCTAATATTCTTGTGGATCAGAAGTTTGAAGCAAAAGTTTCTGACTTTGGACTGGCCAAATCGTTCTCTGGTACCAACACTCACATTACTCACCTTTCCACTCGAGTAGTGGGAACATTTGGGTACCTTGCTCCAGAGTACGCATCAAGCGGTAAGGTCACAGAGAAATCAGATGTGTATTCATATGGGGTTGTACTCCTAGAACTTATAACCGGACGTCCGCCTATCAGTACAATAGATTCCTTGAGGAATGAGGGTCTGGTTCAGTGGGCAAGGCCATTGCTCACTCAAGCCCTGGAAGATGGTGCTTTTGATGCTCTTGTGGATCCACGATTGGAGACAAATTACAACAAGAATGAGATGGCTAGAATGGTCGCTTGTGCTGCTGCTTGTGTTCGACATTCAGCATGGCTTCGACCAAGAATGAGCCAGATAGTCCATGCTTTAGAAGGAGTTGCTTCGTTGATGGATCTTCAGGAAGGAGTTACACCAGGAAACAGTGCGGTATACAATTGCTTGGGGAATTCACATTATAACTCCCGGCAATATGAGGAAGATTTGAAGAATTCCACGGTAACAATGCCAAGTCAAGAGTATGGCATTAGTAGATACACTGAAACTACCAGTGAGTATGGTCTTAATCCCTCAGGCTCAAGCAGCGAAACCCGGCAAACAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000959 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003723 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009451 GO:0009628 GO:0009987 GO:0016070 GO:0016071 GO:0016553 GO:0016554 GO:0016556 GO:0017076 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0050896 GO:0071704 GO:0080156 GO:0090304 GO:0097159 GO:0097367 GO:1900864 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

731

Amino Acids

77.88

Weight (kDa)

8.28

Isoelectric Point (pI)

64.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	380 - 585	9.8e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	382 - 654	3.3e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13850 AT4G13850 AT4G13850 AT4G13850 AT5G61030 AT5G61030
fragaria_vesca	FvH4_5g13810 FvH4_5g13820 FvH4_5g13820
malus_domestica	MD01G1142900.v1.1 MD06G1225200.v1.1 MD14G1212100.v1.1
prunus_persica	Prupe.1G476800_v2.0.a1 Prupe.5G205300_v2.0.a1
pyrus_communis	pycom06g17970 pycom14g17570
rosa_chinensis	RchiOBHm_Chr7g0183111 RchiOBHm_Chr7g0183131
rosa_laevigata	RLG00000005076 RLG00000031728
rosa_multiflora	Rmu_ssc0000111.1_g000008 Rmu_ssc0000111.1_g000010
rosa_roxburghii	Rroxscaffold_3G00270730 Rroxscaffold_3G00270750
rosa_rugosa	Rorug06G0453200 Rorug06G0453300 Rorug06G0453300 Rorug06G0453400 Rorug06G0453500 Rorug06G0453600 Rorug06G0453700
rosa_samantha	Rh7AG056200 Rh7AG056400 Rh7BG055500 Rh7BG055700 Rh7CG057000 Rh7CG057100 Rh7DG055700 Rh7DG055900 Rh7DG056000
rosa_wichuraiana	Rw7G004580 Rw7G004600

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1724, 2049
AatII	GACGTC	1 cut(s)	1735
Acc65I	GGTACC	2 cut(s)	1586, 1638
AccB1I	GGYRCC	2 cut(s)	1586, 1638
AccB7I	CCANNNNNTGG	1 cut(s)	920
AccI	GTMKAC	1 cut(s)	2022
AccIII	TCCGGA	1 cut(s)	880
AclWI	GGATC	5 cut(s)	697, 1539, 1835, 1848, 1992
AcoI	YGGCCR	4 cut(s)	573, 603, 732, 1569
AcsI	RAATTY	3 cut(s)	1379, 2038, 2080
AcuI	CTGAAG	1 cut(s)	1973
AcyI	GRCGYC	2 cut(s)	969, 1732
AfaI	GTAC	8 cut(s)	165, 837, 1188, 1588, 1640, 1655, 1710, 1747
AfeI	AGCGCT	1 cut(s)	535
AfiI	CCNNNNNNNGG	6 cut(s)	484, 650, 908, 920, 965, 1243
AgsI	TTSAA	3 cut(s)	1432, 1544, 2077
AhlI	ACTAGT	1 cut(s)	140
AjnI	CCWGG	6 cut(s)	649, 964, 1192, 1281, 1809, 2005
AleI	CACNNNNGTG	1 cut(s)	13
AluBI	AGCT	2 cut(s)	785, 1439
AluI	AGCT	2 cut(s)	785, 1439
Alw26I	GTCTC	2 cut(s)	24, 1847
AlwI	GGATC	5 cut(s)	697, 1539, 1835, 1848, 1992
Ama87I	CYCGRG	1 cut(s)	1617
Aor13HI	TCCGGA	1 cut(s)	880
Aor51HI	AGCGCT	1 cut(s)	535
AoxI	GGCC	7 cut(s)	573, 603, 732, 775, 1140, 1569, 1790
ApeKI	GCWGC	8 cut(s)	32, 418, 767, 770, 924, 1898, 1901, 2172
ApoI	RAATTY	3 cut(s)	1379, 2038, 2080
Asp718I	GGTACC	2 cut(s)	1586, 1638
AspLEI	GCGC	2 cut(s)	536, 1017
AspS9I	GGNCC	2 cut(s)	208, 911
AsuC2I	CCSGG	2 cut(s)	2056, 2182
AsuNHI	GCTAGC	1 cut(s)	1459
AvaI	CYCGRG	1 cut(s)	1617
AvaII	GGWCC	2 cut(s)	208, 911
AxyI	CCTNAGG	1 cut(s)	2161
BaeGI	GKGCMC	1 cut(s)	1320
BalI	TGGCCA	3 cut(s)	575, 605, 1571
BamHI	GGATCC	1 cut(s)	1840
BanI	GGYRCC	2 cut(s)	1586, 1638
BbsI	GAAGAC	1 cut(s)	137
BbvCI	CCTCAGC	1 cut(s)	1263
BbvI	GCAGC	8 cut(s)	19, 405, 779, 782, 911, 1885, 1888, 2184
BccI	CCATC	8 cut(s)	208, 313, 721, 914, 954, 1811, 1870, 1975
BceAI	ACGGC	3 cut(s)	20, 232, 1002
BcgI	CGANNNNNNTGC	2 cut(s)	283, 317
BciT130I	CCWGG	6 cut(s)	651, 966, 1194, 1283, 1811, 2007
BciVI	GTATCC	1 cut(s)	130
BclI	TGATCA	1 cut(s)	1105
BcnI	CCSGG	2 cut(s)	2056, 2182
BcoDI	GTCTC	2 cut(s)	24, 1847
BcuI	ACTAGT	1 cut(s)	140
BfaI	CTAG	6 cut(s)	141, 627, 1301, 1460, 1715, 1881
BfoI	RGCGCY	1 cut(s)	537
BfuI	GTATCC	1 cut(s)	130
BmcAI	AGTACT	1 cut(s)	1188
Bme1390I	CCNGG	8 cut(s)	651, 966, 1194, 1283, 1811, 2007, 2056, 2182
Bme18I	GGWCC	2 cut(s)	208, 911
BmeT110I	CYCGRG	1 cut(s)	1617
BmgT120I	GGNCC	2 cut(s)	208, 911
BmiI	GGNNCC	4 cut(s)	912, 1588, 1640, 1842
BmrFI	CCNGG	8 cut(s)	651, 966, 1194, 1283, 1811, 2007, 2056, 2182
BmsI	GCATC	6 cut(s)	922, 1297, 1306, 1523, 1667, 1819
BmtI	GCTAGC	1 cut(s)	1463
BpiI	GAAGAC	1 cut(s)	137
BpmI	CTGGAG	1 cut(s)	1632
Bpu10I	CCTNAGC	1 cut(s)	1263
BpuEI	CTTGAG	3 cut(s)	1780, 1788, 2152
BpuMI	CCSGG	2 cut(s)	2056, 2182
BsaBI	GATNNNNATC	1 cut(s)	1482
BsaHI	GRCGYC	2 cut(s)	969, 1732
BsaI	GGTCTC	1 cut(s)	24
BsaJI	CCNNGG	6 cut(s)	14, 826, 906, 1074, 1809, 2085
BsaWI	WCCGGW	3 cut(s)	484, 880, 1727
Bsc4I	CCNNNNNNNGG	6 cut(s)	484, 650, 908, 920, 965, 1243
Bse118I	RCCGGY	3 cut(s)	79, 730, 1236
Bse1I	ACTGG	6 cut(s)	227, 569, 579, 1447, 1572, 2139
Bse21I	CCTNAGG	1 cut(s)	2161
Bse3DI	GCAATG	4 cut(s)	83, 194, 299, 1793
Bse8I	GATNNNNATC	1 cut(s)	1482
BseAI	TCCGGA	1 cut(s)	880
BseBI	CCWGG	6 cut(s)	651, 966, 1194, 1283, 1811, 2007
BseDI	CCNNGG	6 cut(s)	14, 826, 906, 1074, 1809, 2085
BseGI	GGATG	1 cut(s)	794
BseJI	GATNNNNATC	1 cut(s)	1482
BseLI	CCNNNNNNNGG	6 cut(s)	484, 650, 908, 920, 965, 1243
BseMI	GCAATG	4 cut(s)	83, 194, 299, 1793
BseMII	CTCAG	4 cut(s)	1023, 1254, 1326, 2175
BseNI	ACTGG	6 cut(s)	227, 569, 579, 1447, 1572, 2139
BseRI	GAGGAG	6 cut(s)	252, 255, 378, 492, 812, 815
BseSI	GKGCMC	1 cut(s)	1320
BseXI	GCAGC	8 cut(s)	19, 405, 779, 782, 911, 1885, 1888, 2184
BshFI	GGCC	7 cut(s)	575, 605, 734, 777, 1142, 1571, 1792
BshNI	GGYRCC	2 cut(s)	1586, 1638
BsiHKCI	CYCGRG	1 cut(s)	1617
BsiSI	CCGG	8 cut(s)	80, 485, 731, 881, 1237, 1728, 2056, 2182
BslFI	GGGAC	1 cut(s)	924
BslI	CCNNNNNNNGG	6 cut(s)	484, 650, 908, 920, 965, 1243
BsmAI	GTCTC	2 cut(s)	24, 1847
BsmFI	GGGAC	1 cut(s)	924
BsnI	GGCC	7 cut(s)	575, 605, 734, 777, 1142, 1571, 1792
Bso31I	GGTCTC	1 cut(s)	24
BsoBI	CYCGRG	1 cut(s)	1617
Bsp1286I	GDGCHC	1 cut(s)	1320
Bsp13I	TCCGGA	1 cut(s)	880
Bsp1407I	TGTACA	1 cut(s)	163
Bsp143I	GATC	5 cut(s)	702, 1105, 1531, 1840, 1984
Bsp19I	CCATGG	1 cut(s)	1074
BspANI	GGCC	7 cut(s)	575, 605, 734, 777, 1142, 1571, 1792
BspCNI	CTCAG	4 cut(s)	1024, 1255, 1327, 2174
BspEI	TCCGGA	1 cut(s)	880
BspLI	GGNNCC	4 cut(s)	912, 1588, 1640, 1842
BspOI	GCTAGC	1 cut(s)	1463
BspPI	GGATC	5 cut(s)	697, 1539, 1835, 1848, 1992
BspT107I	GGYRCC	2 cut(s)	1586, 1638
BspTNI	GGTCTC	1 cut(s)	24
BsrDI	GCAATG	4 cut(s)	83, 194, 299, 1793
BsrFI	RCCGGY	3 cut(s)	79, 730, 1236
BsrGI	TGTACA	1 cut(s)	163
BsrI	ACTGG	6 cut(s)	227, 569, 579, 1447, 1572, 2139
BssAI	RCCGGY	3 cut(s)	79, 730, 1236
BssECI	CCNNGG	6 cut(s)	14, 826, 906, 1074, 1809, 2085
BssMI	GATC	5 cut(s)	702, 1105, 1531, 1840, 1984
BssNAI	GTATAC	1 cut(s)	2023
BssNI	GRCGYC	2 cut(s)	969, 1732
BssT1I	CCWWGG	2 cut(s)	906, 1074
Bst1107I	GTATAC	1 cut(s)	2023
Bst2UI	CCWGG	6 cut(s)	651, 966, 1194, 1283, 1811, 2007
Bst4CI	ACNGT	7 cut(s)	69, 105, 720, 1322, 1408, 2015, 2089
BstACI	GRCGYC	2 cut(s)	969, 1732
BstAUI	TGTACA	1 cut(s)	163
BstC8I	GCNNGC	5 cut(s)	732, 775, 1027, 1238, 1461
BstDEI	CTNAG	5 cut(s)	1032, 1263, 1335, 1375, 2161
BstDSI	CCRYGG	3 cut(s)	14, 1074, 2085
BstEII	GGTNACC	1 cut(s)	487
BstF5I	GGATG	1 cut(s)	794
BstH2I	RGCGCY	1 cut(s)	537
BstHHI	GCGC	2 cut(s)	536, 1017
BstKTI	GATC	5 cut(s)	705, 1108, 1534, 1843, 1987
BstMAI	GTCTC	2 cut(s)	24, 1847
BstMBI	GATC	5 cut(s)	702, 1105, 1531, 1840, 1984
BstMWI	GCNNNNNNNGC	7 cut(s)	97, 622, 1246, 1294, 1829, 1898, 2172
BstNI	CCWGG	6 cut(s)	651, 966, 1194, 1283, 1811, 2007
BstPI	GGTNACC	1 cut(s)	487
BstSCI	CCNGG	8 cut(s)	649, 964, 1192, 1281, 1809, 2005, 2054, 2180
BstSLI	GKGCMC	1 cut(s)	1320
BstV1I	GCAGC	8 cut(s)	19, 405, 779, 782, 911, 1885, 1888, 2184
BstV2I	GAAGAC	1 cut(s)	137
BstX2I	RGATCY	2 cut(s)	1840, 1984
BstXI	CCANNNNNNTGG	1 cut(s)	1391
BstYI	RGATCY	2 cut(s)	1840, 1984
BstZ17I	GTATAC	1 cut(s)	2023
Bsu36I	CCTNAGG	1 cut(s)	2161
BsuI	GTATCC	1 cut(s)	130
BsuRI	GGCC	7 cut(s)	575, 605, 734, 777, 1142, 1571, 1792
BtgI	CCRYGG	3 cut(s)	14, 1074, 2085
BtsCI	GGATG	1 cut(s)	794
BtsI	GCAGTG	1 cut(s)	1218
BtsIMutI	CAGTG	7 cut(s)	576, 1218, 1318, 1787, 2020, 2127, 2146
Cac8I	GCNNGC	5 cut(s)	732, 775, 1027, 1238, 1461
CfoI	GCGC	2 cut(s)	536, 1017
Cfr10I	RCCGGY	3 cut(s)	79, 730, 1236
Cfr13I	GGNCC	2 cut(s)	208, 911
CseI	GACGC	1 cut(s)	958
Csp6I	GTAC	8 cut(s)	164, 836, 1187, 1587, 1639, 1654, 1709, 1746
CviAII	CATG	7 cut(s)	974, 1075, 1259, 1391, 1472, 1923, 1955
CviQI	GTAC	8 cut(s)	164, 836, 1187, 1587, 1639, 1654, 1709, 1746
DdeI	CTNAG	5 cut(s)	1032, 1263, 1335, 1375, 2161
DpnI	GATC	5 cut(s)	704, 1107, 1533, 1842, 1986
DpnII	GATC	5 cut(s)	702, 1105, 1531, 1840, 1984
EaeI	YGGCCR	4 cut(s)	573, 603, 732, 1569
EciI	GGCGGA	3 cut(s)	276, 402, 1725
Eco130I	CCWWGG	2 cut(s)	906, 1074
Eco147I	AGGCCT	1 cut(s)	777
Eco31I	GGTCTC	1 cut(s)	24
Eco32I	GATATC	2 cut(s)	1081, 1507
Eco47I	GGWCC	2 cut(s)	208, 911
Eco47III	AGCGCT	1 cut(s)	535
Eco57I	CTGAAG	1 cut(s)	1973
Eco81I	CCTNAGG	1 cut(s)	2161
Eco88I	CYCGRG	1 cut(s)	1617
Eco91I	GGTNACC	1 cut(s)	487
EcoO65I	GGTNACC	1 cut(s)	487
EcoRI	GAATTC	3 cut(s)	1379, 2038, 2080
EcoRII	CCWGG	6 cut(s)	649, 964, 1192, 1281, 1809, 2005
EcoRV	GATATC	2 cut(s)	1081, 1507
EcoT14I	CCWWGG	2 cut(s)	906, 1074
ErhI	CCWWGG	2 cut(s)	906, 1074
FaeI	CATG	7 cut(s)	977, 1078, 1262, 1394, 1475, 1926, 1958
FaqI	GGGAC	1 cut(s)	924
FatI	CATG	7 cut(s)	973, 1074, 1258, 1390, 1471, 1922, 1954
FauI	CCCGC	1 cut(s)	132
FauNDI	CATATG	1 cut(s)	1699
FbaI	TGATCA	1 cut(s)	1105
FblI	GTMKAC	1 cut(s)	2022
FokI	GGATG	1 cut(s)	801
FspBI	CTAG	6 cut(s)	141, 627, 1301, 1460, 1715, 1881
GlaI	GCGC	2 cut(s)	535, 1016
GsuI	CTGGAG	1 cut(s)	1632
HaeII	RGCGCY	1 cut(s)	537
HaeIII	GGCC	7 cut(s)	575, 605, 734, 777, 1142, 1571, 1792
HapII	CCGG	8 cut(s)	80, 485, 731, 881, 1237, 1728, 2056, 2182
HgaI	GACGC	1 cut(s)	958
HhaI	GCGC	2 cut(s)	536, 1017
Hin1I	GRCGYC	2 cut(s)	969, 1732
Hin1II	CATG	7 cut(s)	977, 1078, 1262, 1394, 1475, 1926, 1958
Hin6I	GCGC	2 cut(s)	534, 1015
HinP1I	GCGC	2 cut(s)	534, 1015
HincII	GTYRAC	2 cut(s)	471, 1270
HindII	GTYRAC	2 cut(s)	471, 1270
HinfI	GANTC	3 cut(s)	295, 449, 1754
HpaII	CCGG	8 cut(s)	80, 485, 731, 881, 1237, 1728, 2056, 2182
Hpy166II	GTNNAC	5 cut(s)	166, 471, 1177, 1270, 2023
Hpy188I	TCNGA	8 cut(s)	750, 830, 1033, 1138, 1536, 1558, 1687, 2195
Hpy188III	TCNNGA	6 cut(s)	309, 881, 1502, 1649, 1991, 2105
Hpy8I	GTNNAC	5 cut(s)	166, 471, 1177, 1270, 2023
HpyAV	CCTTC	8 cut(s)	36, 282, 324, 630, 1157, 1195, 1958, 1988
HpyCH4III	ACNGT	7 cut(s)	69, 105, 720, 1322, 1408, 2015, 2089
HpyCH4IV	ACGT	1 cut(s)	1732
HpyCH4V	TGCA	6 cut(s)	742, 1046, 1211, 1288, 1451, 1482
HpyF10VI	GCNNNNNNNGC	7 cut(s)	97, 622, 1246, 1294, 1829, 1898, 2172
HpyF3I	CTNAG	5 cut(s)	1032, 1263, 1335, 1375, 2161
HpySE526I	ACGT	1 cut(s)	1732
Hsp92I	GRCGYC	2 cut(s)	969, 1732
Hsp92II	CATG	7 cut(s)	977, 1078, 1262, 1394, 1475, 1926, 1958
HspAI	GCGC	2 cut(s)	534, 1015
Kpn2I	TCCGGA	1 cut(s)	880
KpnI	GGTACC	2 cut(s)	1590, 1642
KroI	GCCGGC	2 cut(s)	730, 1236
KroNI	GCCGGC	2 cut(s)	732, 1238
Ksp22I	TGATCA	1 cut(s)	1105
Kzo9I	GATC	5 cut(s)	702, 1105, 1531, 1840, 1984
LmnI	GCTCC	3 cut(s)	541, 1246, 1651
Lsp1109I	GCAGC	8 cut(s)	19, 405, 779, 782, 911, 1885, 1888, 2184
LweI	GCATC	6 cut(s)	922, 1297, 1306, 1523, 1667, 1819
MaeI	CTAG	6 cut(s)	141, 627, 1301, 1460, 1715, 1881
MaeII	ACGT	1 cut(s)	1732
MalI	GATC	5 cut(s)	704, 1107, 1533, 1842, 1986
MboI	GATC	5 cut(s)	702, 1105, 1531, 1840, 1984
MboII	GAAGA	7 cut(s)	137, 896, 1487, 1826, 1979, 2081, 2089
MfeI	CAATTG	2 cut(s)	1109, 2026
MflI	RGATCY	2 cut(s)	1840, 1984
MhlI	GDGCHC	1 cut(s)	1320
MlsI	TGGCCA	3 cut(s)	575, 605, 1571
MluCI	AATT	7 cut(s)	831, 1109, 1379, 1858, 2026, 2038, 2080
MluNI	TGGCCA	3 cut(s)	575, 605, 1571
MlyI	GAGTC	2 cut(s)	289, 443
MmeI	TCCRAC	4 cut(s)	235, 416, 464, 781
Mox20I	TGGCCA	3 cut(s)	575, 605, 1571
MroI	TCCGGA	1 cut(s)	880
MroNI	GCCGGC	2 cut(s)	730, 1236
MscI	TGGCCA	3 cut(s)	575, 605, 1571
MseI	TTAA	2 cut(s)	1223, 2154
MslI	CAYNNNNRTG	3 cut(s)	13, 951, 1389
Msp20I	TGGCCA	3 cut(s)	575, 605, 1571
MspA1I	CMGCKG	2 cut(s)	418, 1025
MspI	CCGG	8 cut(s)	80, 485, 731, 881, 1237, 1728, 2056, 2182
MspR9I	CCNGG	8 cut(s)	651, 966, 1194, 1283, 1811, 2007, 2056, 2182
MunI	CAATTG	2 cut(s)	1109, 2026
MvaI	CCWGG	6 cut(s)	651, 966, 1194, 1283, 1811, 2007
MwoI	GCNNNNNNNGC	7 cut(s)	97, 622, 1246, 1294, 1829, 1898, 2172
NaeI	GCCGGC	2 cut(s)	732, 1238
NciI	CCSGG	2 cut(s)	2056, 2182
NcoI	CCATGG	1 cut(s)	1074
NdeI	CATATG	1 cut(s)	1699
NdeII	GATC	5 cut(s)	702, 1105, 1531, 1840, 1984
NgoMIV	GCCGGC	2 cut(s)	730, 1236
NheI	GCTAGC	1 cut(s)	1459
NlaIII	CATG	7 cut(s)	977, 1078, 1262, 1394, 1475, 1926, 1958
NlaIV	GGNNCC	4 cut(s)	912, 1588, 1640, 1842
NmuCI	GTSAC	7 cut(s)	43, 69, 105, 229, 253, 487, 1672
OliI	CACNNNNGTG	1 cut(s)	13
PaeR7I	CTCGAG	1 cut(s)	1617
PceI	AGGCCT	1 cut(s)	777
PdiI	GCCGGC	2 cut(s)	732, 1238
PfeI	GAWTC	1 cut(s)	1754
PflMI	CCANNNNNTGG	1 cut(s)	920
PleI	GAGTC	2 cut(s)	289, 443
PpsI	GAGTC	2 cut(s)	289, 443
PsiI	TTATAA	2 cut(s)	1724, 2049
Psp6I	CCWGG	6 cut(s)	649, 964, 1192, 1281, 1809, 2005
PspEI	GGTNACC	1 cut(s)	487
PspGI	CCWGG	6 cut(s)	649, 964, 1192, 1281, 1809, 2005
PspN4I	GGNNCC	4 cut(s)	912, 1588, 1640, 1842
PspPI	GGNCC	2 cut(s)	208, 911
PspXI	VCTCGAGB	1 cut(s)	1617
PsuI	RGATCY	2 cut(s)	1840, 1984
RsaI	GTAC	8 cut(s)	165, 837, 1188, 1588, 1640, 1655, 1710, 1747
RsaNI	GTAC	8 cut(s)	164, 836, 1187, 1587, 1639, 1654, 1709, 1746
RseI	CAYNNNNRTG	3 cut(s)	13, 951, 1389
SaqAI	TTAA	2 cut(s)	1223, 2154
Sau3AI	GATC	5 cut(s)	702, 1105, 1531, 1840, 1984
Sau96I	GGNCC	2 cut(s)	208, 911
ScaI	AGTACT	1 cut(s)	1188
SchI	GAGTC	2 cut(s)	289, 443
ScrFI	CCNGG	8 cut(s)	651, 966, 1194, 1283, 1811, 2007, 2056, 2182
SduI	GDGCHC	1 cut(s)	1320
SfaNI	GCATC	6 cut(s)	922, 1297, 1306, 1523, 1667, 1819
Sfr274I	CTCGAG	1 cut(s)	1617
SinI	GGWCC	2 cut(s)	208, 911
SlaI	CTCGAG	1 cut(s)	1617
SmiMI	CAYNNNNRTG	3 cut(s)	13, 951, 1389
SmlI	CTYRAG	4 cut(s)	1617, 1759, 1803, 2167
SmoI	CTYRAG	4 cut(s)	1617, 1759, 1803, 2167
SpeI	ACTAGT	1 cut(s)	140
Sse9I	AATT	7 cut(s)	831, 1109, 1379, 1858, 2026, 2038, 2080
SseBI	AGGCCT	1 cut(s)	777
SspI	AATATT	1 cut(s)	1522
SspMI	CTAG	6 cut(s)	141, 627, 1301, 1460, 1715, 1881
StuI	AGGCCT	1 cut(s)	777
StyD4I	CCNGG	8 cut(s)	649, 964, 1192, 1281, 1809, 2005, 2054, 2180
StyI	CCWWGG	2 cut(s)	906, 1074
TaaI	ACNGT	7 cut(s)	69, 105, 720, 1322, 1408, 2015, 2089
TaiI	ACGT	1 cut(s)	1735
TaqI	TCGA	3 cut(s)	1618, 1912, 1930
TasI	AATT	7 cut(s)	831, 1109, 1379, 1858, 2026, 2038, 2080
TatI	WGTACW	5 cut(s)	163, 835, 1186, 1708, 1745
TauI	GCSGC	3 cut(s)	91, 418, 1025
TfiI	GAWTC	1 cut(s)	1754
Tru1I	TTAA	2 cut(s)	1223, 2154
Tru9I	TTAA	2 cut(s)	1223, 2154
TscAI	CASTG	7 cut(s)	576, 1218, 1325, 1787, 2020, 2134, 2146
TseFI	GTSAC	7 cut(s)	43, 69, 105, 229, 253, 487, 1672
TseI	GCWGC	8 cut(s)	32, 418, 767, 770, 924, 1898, 1901, 2172
Tsp45I	GTSAC	7 cut(s)	43, 69, 105, 229, 253, 487, 1672
TspDTI	ATGAA	5 cut(s)	1247, 1296, 1487, 1488, 1686
TspRI	CASTG	7 cut(s)	576, 1218, 1325, 1787, 2020, 2134, 2146
Van91I	CCANNNNNTGG	1 cut(s)	920
VpaK11BI	GGWCC	2 cut(s)	208, 911
XapI	RAATTY	3 cut(s)	1379, 2038, 2080
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1621
XhoI	CTCGAG	1 cut(s)	1617
XmiI	GTMKAC	1 cut(s)	2022
XspI	CTAG	6 cut(s)	141, 627, 1301, 1460, 1715, 1881
ZraI	GACGTC	1 cut(s)	1733
ZrmI	AGTACT	1 cut(s)	1188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.