Thioesterase superfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61200 |
| fragaria_vesca | FvH4_7g13460 FvH4_7g13460 FvH4_7g13461 |
| malus_domestica | MD01G1049100.v1.1 MD07G1126000.v1.1 |
| prunus_persica | Prupe.2G157800_v2.0.a1 Prupe.2G158100_v2.0.a1 Prupe.2G158100_v2.0.a1 Prupe.2G158100_v2.0.a1 Prupe.2G158100_v2.0.a1 |
| pyrus_communis | pycom01g07430 pycom07g12050 |
| rosa_chinensis | RchiOBHm_Chr1g0352831 RchiOBHm_Chr1g0352841 RchiOBHm_Chr5g0032131 |
| rosa_laevigata | RLG00000028312 RLG00000028313 |
| rosa_multiflora | Rmu_sc0000825.1_g000012 Rmu_sc0006445.1_g000014 Rmu_sc0006445.1_g000018 Rmu_sc0006445.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00026950 Rroxscaffold_4G00302290 |
| rosa_rugosa | Rorug01G0231700 Rorug01G0231800 |
| rosa_samantha | Rh1AG245000 Rh1AG245100 Rh1BG215700 Rh1CG077200 Rh1CG228800 Rh1CG228900 Rh1DG083700 Rh1DG241700 Rh1DG241800 Rh2AG359500 Rh3DG320000 Rh4DG118300 Rh5DG247100 |
| rosa_wichuraiana | Rw0G013440 Rw1G013190 Rw5G025390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 34 |
| AgsI | TTSAA | 1 cut(s) | 141 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 18, 50 |
| AluBI | AGCT | 1 cut(s) | 79 |
| AluI | AGCT | 1 cut(s) | 79 |
| AlwI | GGATC | 1 cut(s) | 34 |
| AsuHPI | GGTGA | 1 cut(s) | 25 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 37, 69 |
| BauI | CACGAG | 1 cut(s) | 111 |
| BccI | CCATC | 1 cut(s) | 17 |
| BfmI | CTRYAG | 1 cut(s) | 30 |
| BmrI | ACTGGG | 1 cut(s) | 99 |
| BmuI | ACTGGG | 1 cut(s) | 99 |
| BpuEI | CTTGAG | 1 cut(s) | 65 |
| Bse1I | ACTGG | 1 cut(s) | 94 |
| BseNI | ACTGG | 1 cut(s) | 94 |
| Bsp143I | GATC | 2 cut(s) | 26, 99 |
| BspPI | GGATC | 1 cut(s) | 34 |
| BsrI | ACTGG | 1 cut(s) | 94 |
| BssMI | GATC | 2 cut(s) | 26, 99 |
| BssSI | CACGAG | 1 cut(s) | 111 |
| Bst2BI | CACGAG | 1 cut(s) | 111 |
| Bst4CI | ACNGT | 1 cut(s) | 58 |
| BstKTI | GATC | 2 cut(s) | 29, 102 |
| BstMBI | GATC | 2 cut(s) | 26, 99 |
| BstNSI | RCATGY | 1 cut(s) | 133 |
| BstSFI | CTRYAG | 1 cut(s) | 30 |
| BstX2I | RGATCY | 1 cut(s) | 26 |
| BstYI | RGATCY | 1 cut(s) | 26 |
| BtsI | GCAGTG | 1 cut(s) | 105 |
| BtsIMutI | CAGTG | 1 cut(s) | 105 |
| CviAII | CATG | 1 cut(s) | 130 |
| CviJI | RGCY | 1 cut(s) | 79 |
| CviKI_1 | RGCY | 1 cut(s) | 79 |
| DpnI | GATC | 2 cut(s) | 28, 101 |
| DpnII | GATC | 2 cut(s) | 26, 99 |
| FaeI | CATG | 1 cut(s) | 133 |
| FaiI | YATR | 2 cut(s) | 131, 148 |
| FatI | CATG | 1 cut(s) | 129 |
| FspEI | CC | 7 cut(s) | 9, 22, 27, 53, 75, 76, 133 |
| Hin1II | CATG | 1 cut(s) | 133 |
| HphI | GGTGA | 1 cut(s) | 25 |
| Hpy188I | TCNGA | 1 cut(s) | 39 |
| Hpy188III | TCNNGA | 1 cut(s) | 82 |
| HpyAV | CCTTC | 1 cut(s) | 130 |
| HpyCH4III | ACNGT | 1 cut(s) | 58 |
| Hsp92II | CATG | 1 cut(s) | 133 |
| Kzo9I | GATC | 2 cut(s) | 26, 99 |
| LpnPI | CCDG | 2 cut(s) | 53, 75 |
| MalI | GATC | 2 cut(s) | 28, 101 |
| MboI | GATC | 2 cut(s) | 26, 99 |
| MboII | GAAGA | 1 cut(s) | 57 |
| MflI | RGATCY | 1 cut(s) | 26 |
| MluCI | AATT | 1 cut(s) | 143 |
| MnlI | CCTC | 1 cut(s) | 4 |
| MseI | TTAA | 1 cut(s) | 75 |
| NdeII | GATC | 2 cut(s) | 26, 99 |
| NlaIII | CATG | 1 cut(s) | 133 |
| NspI | RCATGY | 1 cut(s) | 133 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 86, 118 |
| PsuI | RGATCY | 1 cut(s) | 26 |
| SaqAI | TTAA | 1 cut(s) | 75 |
| Sau3AI | GATC | 2 cut(s) | 26, 99 |
| SetI | ASST | 3 cut(s) | 15, 81, 122 |
| SfcI | CTRYAG | 1 cut(s) | 30 |
| SgeI | CNNG | 8 cut(s) | 80, 94, 102, 109, 123, 125, 142, 146 |
| SmlI | CTYRAG | 1 cut(s) | 80 |
| SmoI | CTYRAG | 1 cut(s) | 80 |
| Sse9I | AATT | 1 cut(s) | 143 |
| TaaI | ACNGT | 1 cut(s) | 58 |
| TasI | AATT | 1 cut(s) | 143 |
| Tru1I | TTAA | 1 cut(s) | 75 |
| Tru9I | TTAA | 1 cut(s) | 75 |
| TscAI | CASTG | 1 cut(s) | 112 |
| TspRI | CASTG | 1 cut(s) | 112 |
| XceI | RCATGY | 1 cut(s) | 133 |