Thioesterase superfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61200 |
| fragaria_vesca | FvH4_7g13460 FvH4_7g13460 FvH4_7g13461 |
| malus_domestica | MD01G1049100.v1.1 MD07G1126000.v1.1 |
| prunus_persica | Prupe.2G157800_v2.0.a1 Prupe.2G158100_v2.0.a1 Prupe.2G158100_v2.0.a1 Prupe.2G158100_v2.0.a1 Prupe.2G158100_v2.0.a1 |
| pyrus_communis | pycom01g07430 pycom07g12050 |
| rosa_chinensis | RchiOBHm_Chr1g0352831 RchiOBHm_Chr1g0352841 RchiOBHm_Chr5g0032131 |
| rosa_laevigata | RLG00000028312 RLG00000028313 |
| rosa_multiflora | Rmu_sc0000825.1_g000012 Rmu_sc0006445.1_g000014 Rmu_sc0006445.1_g000018 Rmu_sc0006445.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00026950 Rroxscaffold_4G00302290 |
| rosa_rugosa | Rorug01G0231700 Rorug01G0231800 |
| rosa_samantha | Rh1AG245000 Rh1AG245100 Rh1BG215700 Rh1CG077200 Rh1CG228800 Rh1CG228900 Rh1DG083700 Rh1DG241700 Rh1DG241800 Rh2AG359500 Rh3DG320000 Rh4DG118300 Rh5DG247100 |
| rosa_wichuraiana | Rw0G013440 Rw1G013190 Rw5G025390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 66 |
| AclWI | GGATC | 1 cut(s) | 106 |
| AcyI | GRCGYC | 1 cut(s) | 63 |
| AfaI | GTAC | 1 cut(s) | 19 |
| AgsI | TTSAA | 1 cut(s) | 148 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 90, 122 |
| AluBI | AGCT | 2 cut(s) | 33, 151 |
| AluI | AGCT | 2 cut(s) | 33, 151 |
| AlwI | GGATC | 1 cut(s) | 106 |
| AsuHPI | GGTGA | 1 cut(s) | 97 |
| AsuII | TTCGAA | 1 cut(s) | 212 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 109, 141 |
| BauI | CACGAG | 1 cut(s) | 183 |
| BccI | CCATC | 1 cut(s) | 89 |
| BfmI | CTRYAG | 1 cut(s) | 102 |
| BmrI | ACTGGG | 1 cut(s) | 171 |
| BmuI | ACTGGG | 1 cut(s) | 171 |
| BpmI | CTGGAG | 1 cut(s) | 161 |
| Bpu14I | TTCGAA | 1 cut(s) | 212 |
| BpuEI | CTTGAG | 1 cut(s) | 137 |
| BsaHI | GRCGYC | 1 cut(s) | 63 |
| Bse1I | ACTGG | 2 cut(s) | 144, 166 |
| BseNI | ACTGG | 2 cut(s) | 144, 166 |
| BslFI | GGGAC | 1 cut(s) | 50 |
| BsmFI | GGGAC | 1 cut(s) | 50 |
| Bsp119I | TTCGAA | 1 cut(s) | 212 |
| Bsp143I | GATC | 2 cut(s) | 98, 171 |
| BspPI | GGATC | 1 cut(s) | 106 |
| BspT104I | TTCGAA | 1 cut(s) | 212 |
| BsrI | ACTGG | 2 cut(s) | 144, 166 |
| BssMI | GATC | 2 cut(s) | 98, 171 |
| BssNI | GRCGYC | 1 cut(s) | 63 |
| BssSI | CACGAG | 1 cut(s) | 183 |
| Bst2BI | CACGAG | 1 cut(s) | 183 |
| Bst4CI | ACNGT | 1 cut(s) | 130 |
| BstACI | GRCGYC | 1 cut(s) | 63 |
| BstBI | TTCGAA | 1 cut(s) | 212 |
| BstC8I | GCNNGC | 1 cut(s) | 40 |
| BstKTI | GATC | 2 cut(s) | 101, 174 |
| BstMBI | GATC | 2 cut(s) | 98, 171 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 39, 44 |
| BstSFI | CTRYAG | 1 cut(s) | 102 |
| BstX2I | RGATCY | 1 cut(s) | 98 |
| BstYI | RGATCY | 1 cut(s) | 98 |
| BtsI | GCAGTG | 1 cut(s) | 177 |
| BtsIMutI | CAGTG | 2 cut(s) | 137, 177 |
| Cac8I | GCNNGC | 1 cut(s) | 40 |
| Csp6I | GTAC | 1 cut(s) | 18 |
| CviJI | RGCY | 4 cut(s) | 10, 33, 47, 151 |
| CviKI_1 | RGCY | 4 cut(s) | 10, 33, 47, 151 |
| CviQI | GTAC | 1 cut(s) | 18 |
| DpnI | GATC | 2 cut(s) | 100, 173 |
| DpnII | GATC | 2 cut(s) | 98, 171 |
| FaiI | YATR | 3 cut(s) | 201, 203, 220 |
| FaqI | GGGAC | 1 cut(s) | 50 |
| FauNDI | CATATG | 1 cut(s) | 201 |
| GsuI | CTGGAG | 1 cut(s) | 161 |
| Hin1I | GRCGYC | 1 cut(s) | 63 |
| HphI | GGTGA | 1 cut(s) | 97 |
| Hpy188I | TCNGA | 2 cut(s) | 58, 111 |
| Hpy188III | TCNNGA | 1 cut(s) | 154 |
| HpyAV | CCTTC | 1 cut(s) | 202 |
| HpyCH4III | ACNGT | 1 cut(s) | 130 |
| HpyCH4IV | ACGT | 1 cut(s) | 63 |
| HpyCH4V | TGCA | 1 cut(s) | 42 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 39, 44 |
| HpySE526I | ACGT | 1 cut(s) | 63 |
| Hsp92I | GRCGYC | 1 cut(s) | 63 |
| Kzo9I | GATC | 2 cut(s) | 98, 171 |
| LpnPI | CCDG | 6 cut(s) | 8, 25, 62, 81, 125, 147 |
| MaeII | ACGT | 1 cut(s) | 63 |
| MalI | GATC | 2 cut(s) | 100, 173 |
| MboI | GATC | 2 cut(s) | 98, 171 |
| MboII | GAAGA | 1 cut(s) | 129 |
| MflI | RGATCY | 1 cut(s) | 98 |
| MluCI | AATT | 2 cut(s) | 51, 215 |
| MnlI | CCTC | 1 cut(s) | 76 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 39, 44 |
| NdeI | CATATG | 1 cut(s) | 201 |
| NdeII | GATC | 2 cut(s) | 98, 171 |
| NspV | TTCGAA | 1 cut(s) | 212 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 158, 190 |
| PsuI | RGATCY | 1 cut(s) | 98 |
| RsaI | GTAC | 1 cut(s) | 19 |
| RsaNI | GTAC | 1 cut(s) | 18 |
| Sau3AI | GATC | 2 cut(s) | 98, 171 |
| SetI | ASST | 5 cut(s) | 35, 66, 87, 153, 194 |
| SfcI | CTRYAG | 1 cut(s) | 102 |
| SfuI | TTCGAA | 1 cut(s) | 212 |
| SmlI | CTYRAG | 1 cut(s) | 152 |
| SmoI | CTYRAG | 1 cut(s) | 152 |
| Sse9I | AATT | 2 cut(s) | 51, 215 |
| TaaI | ACNGT | 1 cut(s) | 130 |
| TaiI | ACGT | 1 cut(s) | 66 |
| TaqI | TCGA | 1 cut(s) | 212 |
| TasI | AATT | 2 cut(s) | 51, 215 |
| TscAI | CASTG | 2 cut(s) | 144, 184 |
| TspRI | CASTG | 2 cut(s) | 144, 184 |
| ZraI | GACGTC | 1 cut(s) | 64 |