Thioesterase superfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61200 |
| fragaria_vesca | FvH4_7g13460 FvH4_7g13460 FvH4_7g13461 |
| malus_domestica | MD01G1049100.v1.1 MD07G1126000.v1.1 |
| prunus_persica | Prupe.2G157800_v2.0.a1 Prupe.2G158100_v2.0.a1 Prupe.2G158100_v2.0.a1 Prupe.2G158100_v2.0.a1 Prupe.2G158100_v2.0.a1 |
| pyrus_communis | pycom01g07430 pycom07g12050 |
| rosa_chinensis | RchiOBHm_Chr1g0352831 RchiOBHm_Chr1g0352841 RchiOBHm_Chr5g0032131 |
| rosa_laevigata | RLG00000028312 RLG00000028313 |
| rosa_multiflora | Rmu_sc0000825.1_g000012 Rmu_sc0006445.1_g000014 Rmu_sc0006445.1_g000018 Rmu_sc0006445.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00026950 Rroxscaffold_4G00302290 |
| rosa_rugosa | Rorug01G0231700 Rorug01G0231800 |
| rosa_samantha | Rh1AG245000 Rh1AG245100 Rh1BG215700 Rh1CG077200 Rh1CG228800 Rh1CG228900 Rh1DG083700 Rh1DG241700 Rh1DG241800 Rh2AG359500 Rh3DG320000 Rh4DG118300 Rh5DG247100 |
| rosa_wichuraiana | Rw0G013440 Rw1G013190 Rw5G025390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 267 |
| AciI | CCGC | 1 cut(s) | 267 |
| AclWI | GGATC | 1 cut(s) | 259 |
| AfaI | GTAC | 1 cut(s) | 220 |
| AgsI | TTSAA | 1 cut(s) | 301 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 243, 275 |
| AluBI | AGCT | 3 cut(s) | 139, 162, 304 |
| AluI | AGCT | 3 cut(s) | 139, 162, 304 |
| AlwI | GGATC | 1 cut(s) | 259 |
| AsuHPI | GGTGA | 1 cut(s) | 250 |
| AsuII | TTCGAA | 1 cut(s) | 365 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 262, 294 |
| BauI | CACGAG | 1 cut(s) | 336 |
| BccI | CCATC | 1 cut(s) | 242 |
| BfmI | CTRYAG | 2 cut(s) | 231, 255 |
| BmrI | ACTGGG | 1 cut(s) | 324 |
| BmuI | ACTGGG | 1 cut(s) | 324 |
| Bpu14I | TTCGAA | 1 cut(s) | 365 |
| BpuEI | CTTGAG | 1 cut(s) | 290 |
| Bse1I | ACTGG | 1 cut(s) | 319 |
| BseNI | ACTGG | 1 cut(s) | 319 |
| BsgI | GTGCAG | 1 cut(s) | 196 |
| Bsp119I | TTCGAA | 1 cut(s) | 365 |
| Bsp143I | GATC | 2 cut(s) | 251, 324 |
| BspACI | CCGC | 1 cut(s) | 267 |
| BspMAI | CTGCAG | 1 cut(s) | 235 |
| BspPI | GGATC | 1 cut(s) | 259 |
| BspT104I | TTCGAA | 1 cut(s) | 365 |
| BsrBI | CCGCTC | 1 cut(s) | 267 |
| BsrI | ACTGG | 1 cut(s) | 319 |
| BssMI | GATC | 2 cut(s) | 251, 324 |
| BssSI | CACGAG | 1 cut(s) | 336 |
| Bst2BI | CACGAG | 1 cut(s) | 336 |
| Bst4CI | ACNGT | 2 cut(s) | 223, 283 |
| BstBI | TTCGAA | 1 cut(s) | 365 |
| BstDEI | CTNAG | 1 cut(s) | 163 |
| BstKTI | GATC | 2 cut(s) | 254, 327 |
| BstMBI | GATC | 2 cut(s) | 251, 324 |
| BstNSI | RCATGY | 1 cut(s) | 358 |
| BstSFI | CTRYAG | 2 cut(s) | 231, 255 |
| BstX2I | RGATCY | 1 cut(s) | 251 |
| BstYI | RGATCY | 1 cut(s) | 251 |
| BtsI | GCAGTG | 1 cut(s) | 330 |
| BtsIMutI | CAGTG | 2 cut(s) | 228, 330 |
| Csp6I | GTAC | 1 cut(s) | 219 |
| CviAII | CATG | 1 cut(s) | 355 |
| CviJI | RGCY | 3 cut(s) | 139, 162, 304 |
| CviKI_1 | RGCY | 3 cut(s) | 139, 162, 304 |
| CviQI | GTAC | 1 cut(s) | 219 |
| DdeI | CTNAG | 1 cut(s) | 163 |
| DpnI | GATC | 2 cut(s) | 253, 326 |
| DpnII | GATC | 2 cut(s) | 251, 324 |
| FaeI | CATG | 1 cut(s) | 358 |
| FaiI | YATR | 2 cut(s) | 356, 373 |
| FatI | CATG | 1 cut(s) | 354 |
| Hin1II | CATG | 1 cut(s) | 358 |
| HindIII | AAGCTT | 1 cut(s) | 137 |
| HphI | GGTGA | 1 cut(s) | 250 |
| Hpy188I | TCNGA | 1 cut(s) | 264 |
| Hpy188III | TCNNGA | 1 cut(s) | 307 |
| HpyAV | CCTTC | 1 cut(s) | 355 |
| HpyCH4III | ACNGT | 2 cut(s) | 223, 283 |
| HpyCH4V | TGCA | 3 cut(s) | 146, 213, 233 |
| HpyF3I | CTNAG | 1 cut(s) | 163 |
| Hsp92II | CATG | 1 cut(s) | 358 |
| Kzo9I | GATC | 2 cut(s) | 251, 324 |
| LmnI | GCTCC | 2 cut(s) | 159, 264 |
| LpnPI | CCDG | 2 cut(s) | 278, 300 |
| MalI | GATC | 2 cut(s) | 253, 326 |
| MbiI | CCGCTC | 1 cut(s) | 267 |
| MboI | GATC | 2 cut(s) | 251, 324 |
| MboII | GAAGA | 1 cut(s) | 282 |
| MflI | RGATCY | 1 cut(s) | 251 |
| MluCI | AATT | 3 cut(s) | 13, 152, 368 |
| MnlI | CCTC | 2 cut(s) | 30, 229 |
| MseI | TTAA | 5 cut(s) | 12, 39, 173, 179, 195 |
| NdeII | GATC | 2 cut(s) | 251, 324 |
| NlaIII | CATG | 1 cut(s) | 358 |
| NspI | RCATGY | 1 cut(s) | 358 |
| NspV | TTCGAA | 1 cut(s) | 365 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 311, 343 |
| PstI | CTGCAG | 1 cut(s) | 235 |
| PsuI | RGATCY | 1 cut(s) | 251 |
| RsaI | GTAC | 1 cut(s) | 220 |
| RsaNI | GTAC | 1 cut(s) | 219 |
| SaqAI | TTAA | 5 cut(s) | 12, 39, 173, 179, 195 |
| Sau3AI | GATC | 2 cut(s) | 251, 324 |
| SetI | ASST | 5 cut(s) | 141, 164, 240, 306, 347 |
| SfcI | CTRYAG | 2 cut(s) | 231, 255 |
| SfuI | TTCGAA | 1 cut(s) | 365 |
| SmlI | CTYRAG | 1 cut(s) | 305 |
| SmoI | CTYRAG | 1 cut(s) | 305 |
| Sse9I | AATT | 3 cut(s) | 13, 152, 368 |
| SsiI | CCGC | 1 cut(s) | 267 |
| TaaI | ACNGT | 2 cut(s) | 223, 283 |
| TaqI | TCGA | 1 cut(s) | 365 |
| TasI | AATT | 3 cut(s) | 13, 152, 368 |
| TatI | WGTACW | 1 cut(s) | 218 |
| Tru1I | TTAA | 5 cut(s) | 12, 39, 173, 179, 195 |
| Tru9I | TTAA | 5 cut(s) | 12, 39, 173, 179, 195 |
| TscAI | CASTG | 2 cut(s) | 228, 337 |
| TspDTI | ATGAA | 1 cut(s) | 181 |
| TspRI | CASTG | 2 cut(s) | 228, 337 |
| XceI | RCATGY | 1 cut(s) | 358 |