Thioesterase superfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61200 |
| fragaria_vesca | FvH4_7g13460 FvH4_7g13460 FvH4_7g13461 |
| malus_domestica | MD01G1049100.v1.1 MD07G1126000.v1.1 |
| prunus_persica | Prupe.2G157800_v2.0.a1 Prupe.2G158100_v2.0.a1 Prupe.2G158100_v2.0.a1 Prupe.2G158100_v2.0.a1 Prupe.2G158100_v2.0.a1 |
| pyrus_communis | pycom01g07430 pycom07g12050 |
| rosa_chinensis | RchiOBHm_Chr1g0352831 RchiOBHm_Chr1g0352841 RchiOBHm_Chr5g0032131 |
| rosa_laevigata | RLG00000028312 RLG00000028313 |
| rosa_multiflora | Rmu_sc0000825.1_g000012 Rmu_sc0006445.1_g000014 Rmu_sc0006445.1_g000018 Rmu_sc0006445.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00026950 Rroxscaffold_4G00302290 |
| rosa_rugosa | Rorug01G0231700 Rorug01G0231800 |
| rosa_samantha | Rh1AG245000 Rh1AG245100 Rh1BG215700 Rh1CG077200 Rh1CG228800 Rh1CG228900 Rh1DG083700 Rh1DG241700 Rh1DG241800 Rh2AG359500 Rh3DG320000 Rh4DG118300 Rh5DG247100 |
| rosa_wichuraiana | Rw0G013440 Rw1G013190 Rw5G025390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 247 |
| AciI | CCGC | 1 cut(s) | 211 |
| AclWI | GGATC | 1 cut(s) | 125 |
| AcoI | YGGCCR | 1 cut(s) | 124 |
| AgsI | TTSAA | 4 cut(s) | 85, 107, 305, 311 |
| AluBI | AGCT | 1 cut(s) | 33 |
| AluI | AGCT | 1 cut(s) | 33 |
| Alw26I | GTCTC | 1 cut(s) | 232 |
| AlwI | GGATC | 1 cut(s) | 125 |
| AoxI | GGCC | 2 cut(s) | 124, 208 |
| BalI | TGGCCA | 1 cut(s) | 126 |
| BbsI | GAAGAC | 1 cut(s) | 159 |
| BbvCI | CCTCAGC | 1 cut(s) | 95 |
| BcoDI | GTCTC | 1 cut(s) | 232 |
| BfuAI | ACCTGC | 1 cut(s) | 247 |
| BisI | GCNGC | 1 cut(s) | 211 |
| BlsI | GCNGC | 1 cut(s) | 212 |
| BmsI | GCATC | 2 cut(s) | 189, 222 |
| BpiI | GAAGAC | 1 cut(s) | 159 |
| Bpu10I | CCTNAGC | 1 cut(s) | 95 |
| BpuEI | CTTGAG | 1 cut(s) | 170 |
| BsaI | GGTCTC | 1 cut(s) | 232 |
| Bse1I | ACTGG | 1 cut(s) | 253 |
| BseGI | GGATG | 1 cut(s) | 180 |
| BseMII | CTCAG | 2 cut(s) | 39, 86 |
| BseNI | ACTGG | 1 cut(s) | 253 |
| BshFI | GGCC | 2 cut(s) | 126, 210 |
| BslFI | GGGAC | 1 cut(s) | 116 |
| BsmAI | GTCTC | 1 cut(s) | 232 |
| BsmFI | GGGAC | 1 cut(s) | 116 |
| BsnI | GGCC | 2 cut(s) | 126, 210 |
| Bso31I | GGTCTC | 1 cut(s) | 232 |
| Bsp143I | GATC | 1 cut(s) | 117 |
| BspACI | CCGC | 1 cut(s) | 211 |
| BspANI | GGCC | 2 cut(s) | 126, 210 |
| BspCNI | CTCAG | 2 cut(s) | 38, 87 |
| BspMI | ACCTGC | 1 cut(s) | 247 |
| BspPI | GGATC | 1 cut(s) | 125 |
| BspTNI | GGTCTC | 1 cut(s) | 232 |
| BsrI | ACTGG | 1 cut(s) | 253 |
| BssMI | GATC | 1 cut(s) | 117 |
| Bst4CI | ACNGT | 1 cut(s) | 199 |
| Bst6I | CTCTTC | 1 cut(s) | 323 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 219 |
| BstDEI | CTNAG | 2 cut(s) | 25, 95 |
| BstF5I | GGATG | 1 cut(s) | 180 |
| BstKTI | GATC | 1 cut(s) | 120 |
| BstMAI | GTCTC | 1 cut(s) | 232 |
| BstMBI | GATC | 1 cut(s) | 117 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 219 |
| BstV2I | GAAGAC | 1 cut(s) | 159 |
| BstX2I | RGATCY | 1 cut(s) | 117 |
| BstYI | RGATCY | 1 cut(s) | 117 |
| BsuRI | GGCC | 2 cut(s) | 126, 210 |
| BtsCI | GGATG | 1 cut(s) | 180 |
| BveI | ACCTGC | 1 cut(s) | 247 |
| CviAII | CATG | 1 cut(s) | 128 |
| CviJI | RGCY | 6 cut(s) | 10, 33, 126, 190, 210, 252 |
| CviKI_1 | RGCY | 6 cut(s) | 10, 33, 126, 190, 210, 252 |
| DdeI | CTNAG | 2 cut(s) | 25, 95 |
| DpnI | GATC | 1 cut(s) | 119 |
| DpnII | GATC | 1 cut(s) | 117 |
| EaeI | YGGCCR | 1 cut(s) | 124 |
| Eam1104I | CTCTTC | 1 cut(s) | 323 |
| EarI | CTCTTC | 1 cut(s) | 323 |
| Eco31I | GGTCTC | 1 cut(s) | 232 |
| FaeI | CATG | 1 cut(s) | 131 |
| FaiI | YATR | 1 cut(s) | 129 |
| FaqI | GGGAC | 1 cut(s) | 116 |
| FatI | CATG | 1 cut(s) | 127 |
| Fnu4HI | GCNGC | 1 cut(s) | 211 |
| FokI | GGATG | 1 cut(s) | 167 |
| Fsp4HI | GCNGC | 1 cut(s) | 211 |
| GluI | GCNGC | 1 cut(s) | 211 |
| HaeIII | GGCC | 2 cut(s) | 126, 210 |
| Hin1II | CATG | 1 cut(s) | 131 |
| HinfI | GANTC | 3 cut(s) | 274, 281, 329 |
| Hpy188I | TCNGA | 2 cut(s) | 28, 166 |
| Hpy188III | TCNNGA | 5 cut(s) | 48, 74, 104, 278, 322 |
| HpyCH4III | ACNGT | 1 cut(s) | 199 |
| HpyCH4V | TGCA | 1 cut(s) | 144 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 219 |
| HpyF3I | CTNAG | 2 cut(s) | 25, 95 |
| Hsp92II | CATG | 1 cut(s) | 131 |
| Kzo9I | GATC | 1 cut(s) | 117 |
| LmnI | GCTCC | 1 cut(s) | 25 |
| LpnPI | CCDG | 9 cut(s) | 61, 87, 108, 147, 206, 234, 252, 318, 339 |
| LweI | GCATC | 2 cut(s) | 189, 222 |
| MaeIII | GTNAC | 1 cut(s) | 244 |
| MalI | GATC | 1 cut(s) | 119 |
| MboI | GATC | 1 cut(s) | 117 |
| MboII | GAAGA | 2 cut(s) | 164, 310 |
| MfeI | CAATTG | 1 cut(s) | 15 |
| MflI | RGATCY | 1 cut(s) | 117 |
| MlsI | TGGCCA | 1 cut(s) | 126 |
| MluCI | AATT | 6 cut(s) | 15, 43, 57, 269, 305, 311 |
| MluNI | TGGCCA | 1 cut(s) | 126 |
| MlyI | GAGTC | 1 cut(s) | 323 |
| MmeI | TCCRAC | 1 cut(s) | 189 |
| MnlI | CCTC | 6 cut(s) | 34, 90, 179, 194, 200, 326 |
| Mox20I | TGGCCA | 1 cut(s) | 126 |
| MscI | TGGCCA | 1 cut(s) | 126 |
| Msp20I | TGGCCA | 1 cut(s) | 126 |
| MunI | CAATTG | 1 cut(s) | 15 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 219 |
| NdeII | GATC | 1 cut(s) | 117 |
| NlaIII | CATG | 1 cut(s) | 131 |
| PfeI | GAWTC | 2 cut(s) | 274, 281 |
| PkrI | GCNGC | 1 cut(s) | 212 |
| PleI | GAGTC | 1 cut(s) | 323 |
| PpsI | GAGTC | 1 cut(s) | 323 |
| PsuI | RGATCY | 1 cut(s) | 117 |
| SatI | GCNGC | 1 cut(s) | 211 |
| Sau3AI | GATC | 1 cut(s) | 117 |
| SchI | GAGTC | 1 cut(s) | 323 |
| SetI | ASST | 5 cut(s) | 35, 101, 171, 241, 358 |
| SfaNI | GCATC | 2 cut(s) | 189, 222 |
| SmlI | CTYRAG | 1 cut(s) | 185 |
| SmoI | CTYRAG | 1 cut(s) | 185 |
| Sse9I | AATT | 6 cut(s) | 15, 43, 57, 269, 305, 311 |
| SsiI | CCGC | 1 cut(s) | 211 |
| TaaI | ACNGT | 1 cut(s) | 199 |
| TaqI | TCGA | 1 cut(s) | 279 |
| TasI | AATT | 6 cut(s) | 15, 43, 57, 269, 305, 311 |
| TauI | GCSGC | 1 cut(s) | 213 |
| TfiI | GAWTC | 2 cut(s) | 274, 281 |