Rh2BG397500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
56509435 .. 56509629
195 bp
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UTR
Exon/CDS
Intron
Rh2BG397500.1

Sequence Viewer

Length: 195 bp
ATGAAGAGTAAGAGAGTGGCCCGAAACTTGGTGAGCGAAGGCAATATGATGGCGGATGCTAGGCCAATGAAGGGTGAGACATCTACTTTGGTGGCTTCTGATGGGGCTTCATTGAAGGTTACTAAGGTGGAGGCTACTGAGGTAAGTGAGGGTTCTCTCCAATTGGAAATGGAGCCAGCTTTGGCTCAGGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

64

Amino Acids

6.81

Weight (kDa)

5.08

Isoelectric Point (pI)

31.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 53
AfiI CCNNNNNNNGG 2 cut(s) 28, 71
AgsI TTSAA 1 cut(s) 115
AluBI AGCT 1 cut(s) 179
AluI AGCT 1 cut(s) 179
Alw26I GTCTC 1 cut(s) 71
AoxI GGCC 2 cut(s) 18, 62
ArsI GACNNNNNNTTYG 2 cut(s) 70, 102
AspS9I GGNCC 1 cut(s) 19
AsuHPI GGTGA 2 cut(s) 43, 86
BccI CCATC 2 cut(s) 43, 95
BcoDI GTCTC 1 cut(s) 71
BfaI CTAG 1 cut(s) 60
BmgT120I GGNCC 1 cut(s) 19
BmiI GGNNCC 1 cut(s) 174
BmsI GCATC 1 cut(s) 46
Bpu10I CCTNAGC 1 cut(s) 186
Bsc4I CCNNNNNNNGG 2 cut(s) 28, 71
BseGI GGATG 1 cut(s) 61
BseLI CCNNNNNNNGG 2 cut(s) 28, 71
BseMII CTCAG 1 cut(s) 129
BshFI GGCC 2 cut(s) 20, 64
BslI CCNNNNNNNGG 2 cut(s) 28, 71
BsmAI GTCTC 1 cut(s) 71
BsnI GGCC 2 cut(s) 20, 64
BspACI CCGC 1 cut(s) 53
BspANI GGCC 2 cut(s) 20, 64
BspCNI CTCAG 1 cut(s) 130
BspLI GGNNCC 1 cut(s) 174
BstC8I GCNNGC 1 cut(s) 177
BstDEI CTNAG 3 cut(s) 123, 138, 186
BstF5I GGATG 1 cut(s) 61
BstMAI GTCTC 1 cut(s) 71
BsuRI GGCC 2 cut(s) 20, 64
BtsCI GGATG 1 cut(s) 61
Cac8I GCNNGC 1 cut(s) 177
Cfr13I GGNCC 1 cut(s) 19
CviJI RGCY 8 cut(s) 20, 64, 95, 107, 134, 175, 179, 185
CviKI_1 RGCY 8 cut(s) 20, 64, 95, 107, 134, 175, 179, 185
DdeI CTNAG 3 cut(s) 123, 138, 186
EciI GGCGGA 1 cut(s) 68
FaiI YATR 1 cut(s) 47
FokI GGATG 1 cut(s) 68
FspBI CTAG 1 cut(s) 60
HaeIII GGCC 2 cut(s) 20, 64
HphI GGTGA 2 cut(s) 43, 86
Hpy188I TCNGA 1 cut(s) 100
Hpy188III TCNNGA 1 cut(s) 188
HpyAV CCTTC 3 cut(s) 32, 64, 109
HpyF3I CTNAG 3 cut(s) 123, 138, 186
LmnI GCTCC 1 cut(s) 172
LpnPI CCDG 2 cut(s) 173, 189
LweI GCATC 1 cut(s) 46
MaeI CTAG 1 cut(s) 60
MaeIII GTNAC 1 cut(s) 118
MboII GAAGA 1 cut(s) 16
MfeI CAATTG 1 cut(s) 161
MluCI AATT 1 cut(s) 161
MnlI CCTC 3 cut(s) 124, 133, 142
MunI CAATTG 1 cut(s) 161
NlaIV GGNNCC 1 cut(s) 174
PspN4I GGNNCC 1 cut(s) 174
PspPI GGNCC 1 cut(s) 19
Sau96I GGNCC 1 cut(s) 19
SetI ASST 4 cut(s) 120, 129, 144, 181
SfaNI GCATC 1 cut(s) 46
SgeI CNNG 4 cut(s) 33, 40, 72, 188
Sse9I AATT 1 cut(s) 161
SsiI CCGC 1 cut(s) 53
SspMI CTAG 1 cut(s) 60
TasI AATT 1 cut(s) 161
TspDTI ATGAA 3 cut(s) 17, 83, 99
XspI CTAG 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.