Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0004260

Physical Location & Seq

Genomic Coordinates Reverse (-)

15943196 .. 15966687

Gene Structure 23492 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG183200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGGAGTTGGATAGCATTCTAGAACATCTGGAGAACAAGACCATCTTAGTTACTGGAGCCACTGGCTTACTAGGAATGGTATTTGTGGAGAAGATACTAAGGGTTCAACCAAATATTAGAAAGCTCTACCTTCTTATAAGAGCTTCTGATGCCAAATCTGCCACACATCGCATGCACAATGAGATTTTAGAGAAGGAGTTATTTAGGGTTCTTAGTGAAAAATGGGGTGCAGATTTTGAATCCTTCATTTCAAAGAAGGTAATTGCTATTCCGGGAGACGTAGCTTCTGCAAAACTAGGAGTGAAAGGATTTGAATTGAGGGAACGTATGTACAATGAAATACAATTTATACTTCATTCTGCAGCAACCGTGGATTTTAATGACAGGTATGATATTGCTTTGGATGTTAATACATTTGGAGTTCTGCATGTGTTGAGCTTTGCGAAGAAGTGTTTAAAACTGGAAATGCTTGTTCACGTATCAACTGCTTATGTCGGCACCGGAAGGACTGGCCTTATACTAGAGGACTCCTCTCCGATGGATGAGCTGATAAAGGAAATCACTAAATCTGACTTGAAAGTACTGGAAAGGAATATGGTGGTGAACAAATTAAATGAACTAAAAGCACAAAATGCTTCAGAAAAGGTTATTACGAATAACATGAAGGACTTGGGCATTGCAAGAACTATTGATAGCATGATTGGTACTTTTTGGAAAGGGACACTGACATGTTTGCCCGCGGACCCAACAGTCGTATTAGATTTGTTTACAAATTTTATTTTCCAATACTGCACCAAAAGTCCATGGCTTTATAAGGATGGAAGCCCGATCAAGGTTGAGAAGTTGAAAATGTTCACAACTATGGCAGCATTTCACTCGTACATGCAACTCCGCTACAAGTTACCATTGGAGGGATTAAAGTTCTTGAATAAAGAATTTGACCAATATTTTCAAAAATTATATGCCAACTATAACCGAAAAATCACATTTGCGATGCGGTTGGCTGCGTTGTACCGACCATTTTCGCTATACAAGGGCATGTACTTTCTGATTAAGAAAACTGGTGGTGGTTTGATGCCAGGAACGGGAATTGTGTTAGGGGGTCTGGTGCCACAAGGGGTGGTTAGGAAAGAGCCGGTGAAAGGGGTTCTTCCGGAGACCTCTGGAGGGAGCTATGGAGCTGACGCAACACCAACAGTTTCCAAGTTAGGGCTGACGTCCAATGATGGTATGCCAAACCTCATGGATATTGTTGGCAGGTCATTGGAGATGTTGAAGGGTATACCAAGCTGGAATGCTCCATCTCCCATTCAGGATGGTGCTCCATTTCAGCTGGTTCCCATGGCCTTACAGGAGGCACATGTGAGTGGGGTTAAGCATTCACCATCTGGGATGCAAGTTCGTCCAGGTAAGAAGGCTAAATTGCGTGCTGATTCCTCTGCCCTTGTGTGCTTGGATGTGGAAGAGGGTTTTGGTTTACCTAATGATAATGGGATAGTGCAAATCTCCCCTTTGAAGACTAAGAGGGGAAGGCCCAAAGGGGATAAAAACAATTTAGGACCGAAGGTCCAGAGTAAGAGAGTGGACAGGAAGATAACAATGTCGGGATTGCTGCAGAACAGGCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006163 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009259 GO:0009507 GO:0009536 GO:0009611 GO:0009628 GO:0009651 GO:0009698 GO:0009699 GO:0009987 GO:0010345 GO:0016020 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019637 GO:0019693 GO:0019748 GO:0033865 GO:0033875 GO:0034032 GO:0034641 GO:0035336 GO:0035337 GO:0035383 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046483 GO:0050062 GO:0050896 GO:0051186 GO:0055086 GO:0055114 GO:0071704 GO:0071944 GO:0072521 GO:0080019 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901568 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00073 ko04146 ko04212 map00073 map04146 map04212

Pfam Domains

Protein Families

NAD_binding_4 Sterile

Protein Analysis

542

Amino Acids

60.23

Weight (kDa)

9.48

Isoelectric Point (pI)

34.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_4	PF07993	17 - 197	4.9e-43	Male sterility protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004260)

Species	Orthologous Gene IDs
rosa_laevigata	RLG00000007646 RLG00000008043 RLG00000008044 RLG00000019654 RLG00000023898 RLG00000033256 RLG00000033669
rosa_multiflora	Rmu_sc0001544.1_g000023 Rmu_sc0006181.1_g000012
rosa_roxburghii	Rroxscaffold_2G00093260
rosa_samantha	Rh1BG212600 Rh2AG404300 Rh2BG397500 Rh3AG108400 Rh5AG213700 Rh5BG212800 Rh5CG236000 Rh5CG236100 Rh5DG217200 Rh5DG217300 Rh6AG116800 Rh6AG116900 Rh6AG509900 Rh6BG110900 Rh6CG108500 Rh6DG098900 Rh6DG207600 Rh6DG510800 Rh7AG206200 Rh7BG210100 Rh7CG183200 Rh7DG213400
rosa_wichuraiana	Rw5G019530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	137, 813
AasI	GACNNNNNNGTC	1 cut(s)	749
AatII	GACGTC	1 cut(s)	1220
Acc36I	ACCTGC	1 cut(s)	1248
AccB1I	GGYRCC	2 cut(s)	497, 1108
AccI	GTMKAC	1 cut(s)	1282
AccII	CGCG	1 cut(s)	740
AccIII	TCCGGA	1 cut(s)	1153
AciI	CCGC	4 cut(s)	738, 740, 892, 997
AcsI	RAATTY	2 cut(s)	772, 935
AcuI	CTGAAG	1 cut(s)	621
AcyI	GRCGYC	1 cut(s)	1217
AfaI	GTAC	6 cut(s)	332, 582, 706, 881, 1013, 1043
AfiI	CCNNNNNNNGG	6 cut(s)	832, 911, 1085, 1142, 1167, 1209
AflIII	ACRYGT	2 cut(s)	728, 1360
AhdI	GACNNNNNGTC	1 cut(s)	1565
AjnI	CCWGG	2 cut(s)	1078, 1405
AjuI	GAANNNNNNNTTGG	2 cut(s)	1455, 1487
AluBI	AGCT	9 cut(s)	124, 143, 284, 438, 547, 1173, 1181, 1290, 1333
AluI	AGCT	9 cut(s)	124, 143, 284, 438, 547, 1173, 1181, 1290, 1333
Alw21I	GWGCWC	1 cut(s)	1324
Alw26I	GTCTC	2 cut(s)	270, 1151
Aor13HI	TCCGGA	1 cut(s)	1153
AoxI	GGCC	3 cut(s)	511, 1344, 1532
ApeKI	GCWGC	4 cut(s)	362, 866, 1004, 1612
ApoI	RAATTY	2 cut(s)	772, 935
Asp700I	GAANNNNTTC	1 cut(s)	851
AspS9I	GGNCC	4 cut(s)	742, 1533, 1559, 1567
AsuC2I	CCSGG	1 cut(s)	273
AsuHPI	GGTGA	3 cut(s)	613, 1150, 1374
AvaII	GGWCC	3 cut(s)	742, 1559, 1567
BanI	GGYRCC	2 cut(s)	497, 1108
BbsI	GAAGAC	1 cut(s)	1523
Bbv12I	GWGCWC	1 cut(s)	1324
BbvI	GCAGC	4 cut(s)	374, 878, 991, 1599
BccI	CCATC	7 cut(s)	50, 532, 812, 1220, 1309, 1310, 1393
BcgI	CGANNNNNNTGC	2 cut(s)	858, 892
BciT130I	CCWGG	2 cut(s)	1080, 1407
BcnI	CCSGG	1 cut(s)	273
BcoDI	GTCTC	2 cut(s)	270, 1151
BfaI	CTAG	4 cut(s)	20, 71, 296, 521
BfmI	CTRYAG	3 cut(s)	360, 1613, 1625
BfuAI	ACCTGC	1 cut(s)	1248
BisI	GCNGC	4 cut(s)	363, 867, 1005, 1613
BlsI	GCNGC	4 cut(s)	364, 868, 1006, 1614
BmcAI	AGTACT	1 cut(s)	582
Bme1390I	CCNGG	3 cut(s)	273, 1080, 1407
Bme18I	GGWCC	3 cut(s)	742, 1559, 1567
BmeRI	GACNNNNNGTC	1 cut(s)	1565
BmgT120I	GGNCC	4 cut(s)	742, 1533, 1559, 1567
BmiI	GGNNCC	5 cut(s)	58, 499, 744, 1110, 1338
BmrFI	CCNGG	3 cut(s)	273, 1080, 1407
BmsI	GCATC	4 cut(s)	139, 984, 1065, 1383
BpiI	GAAGAC	1 cut(s)	1523
BplI	GAGNNNNNCTC	2 cut(s)	515, 547
BpmI	CTGGAG	3 cut(s)	50, 75, 1185
BpuMI	CCSGG	1 cut(s)	273
BsaAI	YACGTR	1 cut(s)	478
BsaHI	GRCGYC	1 cut(s)	1217
BsaI	GGTCTC	1 cut(s)	1151
BsaJI	CCNNGG	4 cut(s)	369, 738, 803, 1341
BsaWI	WCCGGW	2 cut(s)	500, 1153
Bsc4I	CCNNNNNNNGG	6 cut(s)	832, 911, 1085, 1142, 1167, 1209
Bse118I	RCCGGY	1 cut(s)	1135
Bse1I	ACTGG	6 cut(s)	58, 67, 465, 514, 588, 1066
Bse3DI	GCAATG	1 cut(s)	675
BseAI	TCCGGA	1 cut(s)	1153
BseBI	CCWGG	2 cut(s)	1080, 1407
BseDI	CCNNGG	4 cut(s)	369, 738, 803, 1341
BseGI	GGATG	6 cut(s)	409, 547, 823, 1321, 1398, 1462
BseLI	CCNNNNNNNGG	6 cut(s)	832, 911, 1085, 1142, 1167, 1209
BseMI	GCAATG	1 cut(s)	675
BseNI	ACTGG	6 cut(s)	58, 67, 465, 514, 588, 1066
BseRI	GAGGAG	1 cut(s)	520
BseXI	GCAGC	4 cut(s)	374, 878, 991, 1599
BsgI	GTGCAG	2 cut(s)	249, 775
Bsh1236I	CGCG	1 cut(s)	740
BshFI	GGCC	3 cut(s)	513, 1346, 1534
BshNI	GGYRCC	2 cut(s)	497, 1108
BsiHKAI	GWGCWC	1 cut(s)	1324
BsiSI	CCGG	4 cut(s)	272, 501, 1136, 1154
BslFI	GGGAC	1 cut(s)	733
BslI	CCNNNNNNNGG	6 cut(s)	832, 911, 1085, 1142, 1167, 1209
BsmAI	GTCTC	2 cut(s)	270, 1151
BsmBI	CGTCTC	1 cut(s)	270
BsmFI	GGGAC	1 cut(s)	733
BsmI	GAATGC	3 cut(s)	15, 1300, 1378
BsnI	GGCC	3 cut(s)	513, 1346, 1534
Bso31I	GGTCTC	1 cut(s)	1151
Bsp1286I	GDGCHC	1 cut(s)	1324
Bsp13I	TCCGGA	1 cut(s)	1153
Bsp1407I	TGTACA	1 cut(s)	330
Bsp143I	GATC	1 cut(s)	828
Bsp19I	CCATGG	2 cut(s)	803, 1341
BspACI	CCGC	4 cut(s)	738, 740, 892, 997
BspANI	GGCC	3 cut(s)	513, 1346, 1534
BspEI	TCCGGA	1 cut(s)	1153
BspFNI	CGCG	1 cut(s)	740
BspLI	GGNNCC	5 cut(s)	58, 499, 744, 1110, 1338
BspMAI	CTGCAG	2 cut(s)	364, 1617
BspMI	ACCTGC	1 cut(s)	1248
BspT107I	GGYRCC	2 cut(s)	497, 1108
BspTNI	GGTCTC	1 cut(s)	1151
BsrDI	GCAATG	1 cut(s)	675
BsrFI	RCCGGY	1 cut(s)	1135
BsrGI	TGTACA	1 cut(s)	330
BsrI	ACTGG	6 cut(s)	58, 67, 465, 514, 588, 1066
BssAI	RCCGGY	1 cut(s)	1135
BssECI	CCNNGG	4 cut(s)	369, 738, 803, 1341
BssMI	GATC	1 cut(s)	828
BssNAI	GTATAC	1 cut(s)	1283
BssNI	GRCGYC	1 cut(s)	1217
BssT1I	CCWWGG	2 cut(s)	803, 1341
Bst1107I	GTATAC	1 cut(s)	1283
Bst2UI	CCWGG	2 cut(s)	1080, 1407
Bst4CI	ACNGT	3 cut(s)	370, 751, 1198
Bst6I	CTCTTC	1 cut(s)	1458
BstACI	GRCGYC	1 cut(s)	1217
BstAPI	GCANNNNNTGC	1 cut(s)	632
BstAUI	TGTACA	1 cut(s)	330
BstBAI	YACGTR	1 cut(s)	478
BstC8I	GCNNGC	3 cut(s)	173, 738, 1428
BstDEI	CTNAG	4 cut(s)	46, 98, 212, 1521
BstDSI	CCRYGG	4 cut(s)	369, 738, 803, 1341
BstF5I	GGATG	6 cut(s)	409, 547, 823, 1321, 1398, 1462
BstFNI	CGCG	1 cut(s)	740
BstKTI	GATC	1 cut(s)	831
BstMAI	GTCTC	2 cut(s)	270, 1151
BstMBI	GATC	1 cut(s)	828
BstMWI	GCNNNNNNNGC	4 cut(s)	149, 158, 632, 1621
BstNI	CCWGG	2 cut(s)	1080, 1407
BstNSI	RCATGY	6 cut(s)	175, 431, 732, 886, 1042, 1364
BstSCI	CCNGG	3 cut(s)	271, 1078, 1405
BstSFI	CTRYAG	3 cut(s)	360, 1613, 1625
BstUI	CGCG	1 cut(s)	740
BstV1I	GCAGC	4 cut(s)	374, 878, 991, 1599
BstV2I	GAAGAC	1 cut(s)	1523
BstZ17I	GTATAC	1 cut(s)	1283
BsuRI	GGCC	3 cut(s)	513, 1346, 1534
BtgI	CCRYGG	4 cut(s)	369, 738, 803, 1341
BtgZI	GCGATG	2 cut(s)	152, 1007
BtsCI	GGATG	6 cut(s)	409, 547, 823, 1321, 1398, 1462
BtsIMutI	CAGTG	2 cut(s)	60, 722
BveI	ACCTGC	1 cut(s)	1248
Cac8I	GCNNGC	3 cut(s)	173, 738, 1428
Cfr10I	RCCGGY	1 cut(s)	1135
Cfr13I	GGNCC	4 cut(s)	742, 1533, 1559, 1567
Cfr42I	CCGCGG	1 cut(s)	741
CseI	GACGC	1 cut(s)	1193
Csp6I	GTAC	6 cut(s)	331, 581, 705, 880, 1012, 1042
CviQI	GTAC	6 cut(s)	331, 581, 705, 880, 1012, 1042
DdeI	CTNAG	4 cut(s)	46, 98, 212, 1521
DpnI	GATC	1 cut(s)	830
DpnII	GATC	1 cut(s)	828
DraI	TTTAAA	1 cut(s)	456
DrdI	GACNNNNNNGTC	1 cut(s)	749
DriI	GACNNNNNGTC	1 cut(s)	1565
DseDI	GACNNNNNNGTC	1 cut(s)	749
Eam1104I	CTCTTC	1 cut(s)	1458
Eam1105I	GACNNNNNGTC	1 cut(s)	1565
EarI	CTCTTC	1 cut(s)	1458
Eco130I	CCWWGG	2 cut(s)	803, 1341
Eco31I	GGTCTC	1 cut(s)	1151
Eco47I	GGWCC	3 cut(s)	742, 1559, 1567
Eco57I	CTGAAG	1 cut(s)	621
EcoRII	CCWGG	2 cut(s)	1078, 1405
EcoT14I	CCWWGG	2 cut(s)	803, 1341
ErhI	CCWWGG	2 cut(s)	803, 1341
Esp3I	CGTCTC	1 cut(s)	270
FalI	AAGNNNNNCTT	4 cut(s)	29, 61, 1134, 1166
FaqI	GGGAC	1 cut(s)	733
FauI	CCCGC	1 cut(s)	745
FblI	GTMKAC	1 cut(s)	1282
Fnu4HI	GCNGC	4 cut(s)	363, 867, 1005, 1613
FokI	GGATG	6 cut(s)	416, 554, 830, 1328, 1405, 1469
Fsp4HI	GCNGC	4 cut(s)	363, 867, 1005, 1613
FspBI	CTAG	4 cut(s)	20, 71, 296, 521
GluI	GCNGC	4 cut(s)	363, 867, 1005, 1613
GsuI	CTGGAG	3 cut(s)	50, 75, 1185
HaeIII	GGCC	3 cut(s)	513, 1346, 1534
HapII	CCGG	4 cut(s)	272, 501, 1136, 1154
HgaI	GACGC	1 cut(s)	1193
Hin1I	GRCGYC	1 cut(s)	1217
HinfI	GANTC	3 cut(s)	239, 527, 1433
HpaII	CCGG	4 cut(s)	272, 501, 1136, 1154
HphI	GGTGA	3 cut(s)	613, 1150, 1374
Hpy166II	GTNNAC	7 cut(s)	475, 604, 768, 855, 1283, 1478, 1585
Hpy188I	TCNGA	5 cut(s)	148, 537, 571, 640, 1050
Hpy188III	TCNNGA	8 cut(s)	20, 29, 925, 1154, 1164, 1313, 1570, 1605
Hpy8I	GTNNAC	7 cut(s)	475, 604, 768, 855, 1283, 1478, 1585
HpyCH4III	ACNGT	3 cut(s)	370, 751, 1198
HpyCH4IV	ACGT	4 cut(s)	279, 325, 477, 1217
HpyF10VI	GCNNNNNNNGC	4 cut(s)	149, 158, 632, 1621
HpyF3I	CTNAG	4 cut(s)	46, 98, 212, 1521
HpySE526I	ACGT	4 cut(s)	279, 325, 477, 1217
Hsp92I	GRCGYC	1 cut(s)	1217
Kpn2I	TCCGGA	1 cut(s)	1153
KspI	CCGCGG	1 cut(s)	741
Kzo9I	GATC	1 cut(s)	828
LmnI	GCTCC	5 cut(s)	56, 1170, 1178, 1303, 1327
Lsp1109I	GCAGC	4 cut(s)	374, 878, 991, 1599
LweI	GCATC	4 cut(s)	139, 984, 1065, 1383
MaeI	CTAG	4 cut(s)	20, 71, 296, 521
MaeII	ACGT	4 cut(s)	279, 325, 477, 1217
MaeIII	GTNAC	2 cut(s)	49, 900
MalI	GATC	1 cut(s)	830
MboI	GATC	1 cut(s)	828
MboII	GAAGA	6 cut(s)	103, 457, 1142, 1475, 1528, 1603
MhlI	GDGCHC	1 cut(s)	1324
MlyI	GAGTC	1 cut(s)	521
MroI	TCCGGA	1 cut(s)	1153
MroXI	GAANNNNTTC	1 cut(s)	851
MseI	TTAA	7 cut(s)	378, 408, 455, 611, 917, 1053, 1374
MslI	CAYNNNNRTG	3 cut(s)	727, 860, 1365
MspA1I	CMGCKG	2 cut(s)	740, 1333
MspI	CCGG	4 cut(s)	272, 501, 1136, 1154
MspR9I	CCNGG	3 cut(s)	273, 1080, 1407
Mva1269I	GAATGC	3 cut(s)	15, 1300, 1378
MvaI	CCWGG	2 cut(s)	1080, 1407
MvnI	CGCG	1 cut(s)	740
MwoI	GCNNNNNNNGC	4 cut(s)	149, 158, 632, 1621
NciI	CCSGG	1 cut(s)	273
NcoI	CCATGG	2 cut(s)	803, 1341
NdeII	GATC	1 cut(s)	828
NlaIV	GGNNCC	5 cut(s)	58, 499, 744, 1110, 1338
NspI	RCATGY	6 cut(s)	175, 431, 732, 886, 1042, 1364
PaeI	GCATGC	1 cut(s)	175
PciI	ACATGT	2 cut(s)	728, 1360
PctI	GAATGC	3 cut(s)	15, 1300, 1378
PdmI	GAANNNNTTC	1 cut(s)	851
PfeI	GAWTC	2 cut(s)	239, 1433
PfoI	TCCNGGA	1 cut(s)	271
PkrI	GCNGC	4 cut(s)	364, 868, 1006, 1614
PleI	GAGTC	1 cut(s)	521
PpsI	GAGTC	1 cut(s)	521
Ppu21I	YACGTR	1 cut(s)	478
PscI	ACATGT	2 cut(s)	728, 1360
PsiI	TTATAA	2 cut(s)	137, 813
Psp6I	CCWGG	2 cut(s)	1078, 1405
PspGI	CCWGG	2 cut(s)	1078, 1405
PspN4I	GGNNCC	5 cut(s)	58, 499, 744, 1110, 1338
PspPI	GGNCC	4 cut(s)	742, 1533, 1559, 1567
PstI	CTGCAG	2 cut(s)	364, 1617
PvuII	CAGCTG	1 cut(s)	1333
RsaI	GTAC	6 cut(s)	332, 582, 706, 881, 1013, 1043
RsaNI	GTAC	6 cut(s)	331, 581, 705, 880, 1012, 1042
RseI	CAYNNNNRTG	3 cut(s)	727, 860, 1365
SacII	CCGCGG	1 cut(s)	741
SaqAI	TTAA	7 cut(s)	378, 408, 455, 611, 917, 1053, 1374
SatI	GCNGC	4 cut(s)	363, 867, 1005, 1613
Sau3AI	GATC	1 cut(s)	828
Sau96I	GGNCC	4 cut(s)	742, 1533, 1559, 1567
ScaI	AGTACT	1 cut(s)	582
SchI	GAGTC	1 cut(s)	521
ScrFI	CCNGG	3 cut(s)	273, 1080, 1407
SduI	GDGCHC	1 cut(s)	1324
SfaNI	GCATC	4 cut(s)	139, 984, 1065, 1383
SfcI	CTRYAG	3 cut(s)	360, 1613, 1625
Sfr303I	CCGCGG	1 cut(s)	741
SgrBI	CCGCGG	1 cut(s)	741
SinI	GGWCC	3 cut(s)	742, 1559, 1567
SmiMI	CAYNNNNRTG	3 cut(s)	727, 860, 1365
SphI	GCATGC	1 cut(s)	175
SsiI	CCGC	4 cut(s)	738, 740, 892, 997
SspI	AATATT	2 cut(s)	115, 947
SspMI	CTAG	4 cut(s)	20, 71, 296, 521
StyD4I	CCNGG	3 cut(s)	271, 1078, 1405
StyI	CCWWGG	2 cut(s)	803, 1341
TaaI	ACNGT	3 cut(s)	370, 751, 1198
TaiI	ACGT	4 cut(s)	282, 328, 480, 1220
TaqII	GACCGA	1 cut(s)	1576
TatI	WGTACW	3 cut(s)	330, 580, 1041
TfiI	GAWTC	2 cut(s)	239, 1433
Tru1I	TTAA	7 cut(s)	378, 408, 455, 611, 917, 1053, 1374
Tru9I	TTAA	7 cut(s)	378, 408, 455, 611, 917, 1053, 1374
TscAI	CASTG	2 cut(s)	67, 729
TseI	GCWGC	4 cut(s)	362, 866, 1004, 1612
TspDTI	ATGAA	5 cut(s)	235, 344, 351, 630, 677
TspRI	CASTG	2 cut(s)	67, 729
VpaK11BI	GGWCC	3 cut(s)	742, 1559, 1567
XapI	RAATTY	2 cut(s)	772, 935
XbaI	TCTAGA	1 cut(s)	19
XceI	RCATGY	6 cut(s)	175, 431, 732, 886, 1042, 1364
XmiI	GTMKAC	1 cut(s)	1282
XmnI	GAANNNNTTC	1 cut(s)	851
XspI	CTAG	4 cut(s)	20, 71, 296, 521
ZraI	GACGTC	1 cut(s)	1218
ZrmI	AGTACT	1 cut(s)	582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.