Rh6AG116900

Very-long-chain enoyl-CoA reductase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
17568778 .. 17569056
279 bp
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UTR
Exon/CDS
Intron
Rh6AG116900.1

Sequence Viewer

Length: 279 bp
ATGGCATGGCCAATCATATTTGTTTTTCCACCAGCTTCTGTGTTCATCACAGCCATGTCAGTGATCTGCTTCACAGCGTCAGCTTATGCCGGGTTCTCGGAGGTGAGAGGAAAGCACCTGGAGTATTCCAAGTTTTGGAAAAATAATAGCAATCAATCCATTTCTCAAAAATCAAAGCAAATTAAAATATCCGGTAGAAGAGGCATGCAAATTACTTATACTCCCTCATTTCTTGCTAGTCTCACATCCTTGGTGTTCGTTCCCGGCCCGTTACGGTGA

Protein Analysis

92

Amino Acids

10.27

Weight (kDa)

10.29

Isoelectric Point (pI)

41.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 135
AcoI YGGCCR 1 cut(s) 8
AfiI CCNNNNNNNGG 1 cut(s) 135
AjnI CCWGG 1 cut(s) 117
AluBI AGCT 2 cut(s) 35, 83
AluI AGCT 2 cut(s) 35, 83
Alw26I GTCTC 1 cut(s) 245
AlwNI CAGNNNCTG 1 cut(s) 38
AoxI GGCC 2 cut(s) 8, 265
AspS9I GGNCC 1 cut(s) 266
AsuC2I CCSGG 2 cut(s) 91, 264
AsuHPI GGTGA 1 cut(s) 115
BalI TGGCCA 1 cut(s) 10
BciT130I CCWGG 1 cut(s) 119
BcnI CCSGG 2 cut(s) 91, 264
BcoDI GTCTC 1 cut(s) 245
BfaI CTAG 1 cut(s) 237
Bme1390I CCNGG 3 cut(s) 91, 119, 264
BmgT120I GGNCC 1 cut(s) 266
BmrFI CCNGG 3 cut(s) 91, 119, 264
BpmI CTGGAG 1 cut(s) 140
BpuMI CCSGG 2 cut(s) 91, 264
BsaJI CCNNGG 1 cut(s) 249
BsaWI WCCGGW 1 cut(s) 191
BsaXI ACNNNNNCTCC 2 cut(s) 205, 235
Bsc4I CCNNNNNNNGG 1 cut(s) 135
BseBI CCWGG 1 cut(s) 119
BseDI CCNNGG 1 cut(s) 249
BseGI GGATG 1 cut(s) 245
BseLI CCNNNNNNNGG 1 cut(s) 135
BshFI GGCC 2 cut(s) 10, 267
BsiSI CCGG 3 cut(s) 90, 192, 264
BslI CCNNNNNNNGG 1 cut(s) 135
BsmAI GTCTC 1 cut(s) 245
BsnI GGCC 2 cut(s) 10, 267
Bsp143I GATC 1 cut(s) 63
BspANI GGCC 2 cut(s) 10, 267
BssECI CCNNGG 1 cut(s) 249
BssMI GATC 1 cut(s) 63
BssT1I CCWWGG 1 cut(s) 249
Bst2UI CCWGG 1 cut(s) 119
Bst4CI ACNGT 1 cut(s) 276
Bst6I CTCTTC 1 cut(s) 193
BstC8I GCNNGC 1 cut(s) 206
BstF5I GGATG 1 cut(s) 245
BstKTI GATC 1 cut(s) 66
BstMAI GTCTC 1 cut(s) 245
BstMBI GATC 1 cut(s) 63
BstNI CCWGG 1 cut(s) 119
BstNSI RCATGY 1 cut(s) 208
BstSCI CCNGG 3 cut(s) 89, 117, 262
BsuRI GGCC 2 cut(s) 10, 267
BtsCI GGATG 1 cut(s) 245
BtsIMutI CAGTG 1 cut(s) 66
Cac8I GCNNGC 1 cut(s) 206
CaiI CAGNNNCTG 1 cut(s) 38
Cfr13I GGNCC 1 cut(s) 266
CseI GACGC 1 cut(s) 66
CviAII CATG 3 cut(s) 6, 55, 205
CviJI RGCY 5 cut(s) 10, 35, 53, 83, 267
CviKI_1 RGCY 5 cut(s) 10, 35, 53, 83, 267
DpnI GATC 1 cut(s) 65
DpnII GATC 1 cut(s) 63
EaeI YGGCCR 1 cut(s) 8
Eam1104I CTCTTC 1 cut(s) 193
EarI CTCTTC 1 cut(s) 193
Eco130I CCWWGG 1 cut(s) 249
EcoRII CCWGG 1 cut(s) 117
EcoT14I CCWWGG 1 cut(s) 249
ErhI CCWWGG 1 cut(s) 249
FaeI CATG 3 cut(s) 9, 58, 208
FaiI YATR 6 cut(s) 7, 17, 56, 87, 206, 219
FatI CATG 3 cut(s) 5, 54, 204
FokI GGATG 1 cut(s) 232
FspBI CTAG 1 cut(s) 237
GsuI CTGGAG 1 cut(s) 140
HaeIII GGCC 2 cut(s) 10, 267
HapII CCGG 3 cut(s) 90, 192, 264
HgaI GACGC 1 cut(s) 66
Hin1II CATG 3 cut(s) 9, 58, 208
HpaII CCGG 3 cut(s) 90, 192, 264
HphI GGTGA 1 cut(s) 115
Hpy188I TCNGA 1 cut(s) 100
HpyCH4III ACNGT 1 cut(s) 276
HpyCH4V TGCA 1 cut(s) 208
Hsp92II CATG 3 cut(s) 9, 58, 208
Kzo9I GATC 1 cut(s) 63
LpnPI CCDG 5 cut(s) 45, 103, 104, 131, 205
MaeI CTAG 1 cut(s) 237
MaeIII GTNAC 1 cut(s) 270
MalI GATC 1 cut(s) 65
MboI GATC 1 cut(s) 63
MboII GAAGA 1 cut(s) 210
MlsI TGGCCA 1 cut(s) 10
MluCI AATT 2 cut(s) 180, 210
MluNI TGGCCA 1 cut(s) 10
MnlI CCTC 4 cut(s) 94, 101, 194, 235
Mox20I TGGCCA 1 cut(s) 10
MscI TGGCCA 1 cut(s) 10
MseI TTAA 1 cut(s) 183
MslI CAYNNNNRTG 2 cut(s) 53, 59
Msp20I TGGCCA 1 cut(s) 10
MspI CCGG 3 cut(s) 90, 192, 264
MspR9I CCNGG 3 cut(s) 91, 119, 264
MvaI CCWGG 1 cut(s) 119
NciI CCSGG 2 cut(s) 91, 264
NdeII GATC 1 cut(s) 63
NlaIII CATG 3 cut(s) 9, 58, 208
NspI RCATGY 1 cut(s) 208
PaeI GCATGC 1 cut(s) 208
PflMI CCANNNNNTGG 1 cut(s) 135
Psp6I CCWGG 1 cut(s) 117
PspGI CCWGG 1 cut(s) 117
PspPI GGNCC 1 cut(s) 266
PstNI CAGNNNCTG 1 cut(s) 38
RseI CAYNNNNRTG 2 cut(s) 53, 59
SaqAI TTAA 1 cut(s) 183
Sau3AI GATC 1 cut(s) 63
Sau96I GGNCC 1 cut(s) 266
ScrFI CCNGG 3 cut(s) 91, 119, 264
SetI ASST 4 cut(s) 37, 85, 105, 120
SmiMI CAYNNNNRTG 2 cut(s) 53, 59
SphI GCATGC 1 cut(s) 208
Sse9I AATT 2 cut(s) 180, 210
SspMI CTAG 1 cut(s) 237
StyD4I CCNGG 3 cut(s) 89, 117, 262
StyI CCWWGG 1 cut(s) 249
TaaI ACNGT 1 cut(s) 276
TasI AATT 2 cut(s) 180, 210
Tru1I TTAA 1 cut(s) 183
Tru9I TTAA 1 cut(s) 183
TscAI CASTG 1 cut(s) 66
TspDTI ATGAA 1 cut(s) 34
TspRI CASTG 1 cut(s) 66
Van91I CCANNNNNTGG 1 cut(s) 135
XceI RCATGY 1 cut(s) 208
XspI CTAG 1 cut(s) 237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.