Rh5CG236100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
24571228 .. 24571425
198 bp
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UTR
Exon/CDS
Intron
Rh5CG236100.1

Sequence Viewer

Length: 198 bp
ATGGCTATACAAGTGGCACAAGTCAGTGGGGCCAAGCGTTCACCATCTGTTGTGCAAGCTCGTCTAGGTAAGAAGGCAAAACTGCTTAATGATTCTTCTGCCTTAATGTGCTTGGATGTCGAAGAGGGGTTTGGGTTGCCTAATGATAATGGGATAGTGAAAATATCCCCTTTGAAGACTAAGAGGGGTATGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

65

Amino Acids

6.87

Weight (kDa)

9.9

Isoelectric Point (pI)

53.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 175
AjuI GAANNNNNNNTTGG 2 cut(s) 114, 146
AluBI AGCT 1 cut(s) 59
AluI AGCT 1 cut(s) 59
AoxI GGCC 1 cut(s) 30
AspS9I GGNCC 1 cut(s) 30
AsuHPI GGTGA 1 cut(s) 33
BbsI GAAGAC 1 cut(s) 182
BccI CCATC 1 cut(s) 52
BfaI CTAG 1 cut(s) 65
BmgT120I GGNCC 1 cut(s) 30
BmiI GGNNCC 1 cut(s) 31
BpiI GAAGAC 1 cut(s) 182
BseGI GGATG 1 cut(s) 121
BshFI GGCC 1 cut(s) 32
BsnI GGCC 1 cut(s) 32
BspANI GGCC 1 cut(s) 32
BspLI GGNNCC 1 cut(s) 31
Bst6I CTCTTC 1 cut(s) 117
BstC8I GCNNGC 1 cut(s) 57
BstDEI CTNAG 1 cut(s) 180
BstF5I GGATG 1 cut(s) 121
BstV2I GAAGAC 1 cut(s) 182
BsuRI GGCC 1 cut(s) 32
BtsCI GGATG 1 cut(s) 121
BtsIMutI CAGTG 1 cut(s) 31
Cac8I GCNNGC 1 cut(s) 57
Cfr13I GGNCC 1 cut(s) 30
CviJI RGCY 3 cut(s) 5, 32, 59
CviKI_1 RGCY 3 cut(s) 5, 32, 59
DdeI CTNAG 1 cut(s) 180
Eam1104I CTCTTC 1 cut(s) 117
EarI CTCTTC 1 cut(s) 117
FaiI YATR 2 cut(s) 8, 191
FokI GGATG 1 cut(s) 128
FspBI CTAG 1 cut(s) 65
HaeIII GGCC 1 cut(s) 32
HinfI GANTC 1 cut(s) 92
HphI GGTGA 1 cut(s) 33
Hpy166II GTNNAC 1 cut(s) 41
Hpy8I GTNNAC 1 cut(s) 41
HpyAV CCTTC 1 cut(s) 67
HpyCH4V TGCA 1 cut(s) 55
HpyF3I CTNAG 1 cut(s) 180
MaeI CTAG 1 cut(s) 65
MboII GAAGA 3 cut(s) 87, 134, 187
MnlI CCTC 2 cut(s) 118, 177
MseI TTAA 3 cut(s) 87, 104, 196
NlaIV GGNNCC 1 cut(s) 31
PfeI GAWTC 1 cut(s) 92
PspN4I GGNNCC 1 cut(s) 31
PspPI GGNCC 1 cut(s) 30
SaqAI TTAA 3 cut(s) 87, 104, 196
Sau96I GGNCC 1 cut(s) 30
SetI ASST 2 cut(s) 61, 70
SgeI CNNG 7 cut(s) 23, 32, 46, 68, 72, 77, 124
SspMI CTAG 1 cut(s) 65
TaqI TCGA 1 cut(s) 120
TfiI GAWTC 1 cut(s) 92
Tru1I TTAA 3 cut(s) 87, 104, 196
Tru9I TTAA 3 cut(s) 87, 104, 196
TscAI CASTG 1 cut(s) 31
TspRI CASTG 1 cut(s) 31
XspI CTAG 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.